BLASTX nr result

ID: Ephedra28_contig00007445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00007445
         (1542 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006297679.1| hypothetical protein CARUB_v10013711mg [Caps...   183   2e-43
ref|XP_006852105.1| hypothetical protein AMTR_s00049p00011400 [A...   179   3e-42
ref|XP_006492218.1| PREDICTED: uncharacterized CRM domain-contai...   177   8e-42
ref|XP_006492217.1| PREDICTED: uncharacterized CRM domain-contai...   177   8e-42
ref|XP_006418629.1| hypothetical protein EUTSA_v10002612mg [Eutr...   177   8e-42
ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp....   177   1e-41
gb|ESW17924.1| hypothetical protein PHAVU_007G279800g [Phaseolus...   177   1e-41
dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]        175   5e-41
ref|NP_189171.2| RNA-binding CRS1 / YhbY (CRM) domain protein [A...   175   5e-41
ref|NP_001078207.1| RNA-binding CRS1 / YhbY (CRM) domain protein...   175   5e-41
ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [S...   174   7e-41
gb|EPS72053.1| hypothetical protein M569_02705, partial [Genlise...   174   9e-41
ref|XP_006366821.1| PREDICTED: uncharacterized CRM domain-contai...   173   2e-40
ref|XP_004242444.1| PREDICTED: uncharacterized CRM domain-contai...   172   3e-40
ref|XP_004976062.1| PREDICTED: uncharacterized CRM domain-contai...   171   8e-40
ref|NP_001132081.1| hypothetical protein [Zea mays] gi|194693368...   171   1e-39
ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-contai...   169   3e-39
ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-contai...   168   5e-39
gb|ACR34824.1| unknown [Zea mays] gi|414586597|tpg|DAA37168.1| T...   168   7e-39
ref|XP_004290124.1| PREDICTED: uncharacterized CRM domain-contai...   167   1e-38

>ref|XP_006297679.1| hypothetical protein CARUB_v10013711mg [Capsella rubella]
            gi|482566388|gb|EOA30577.1| hypothetical protein
            CARUB_v10013711mg [Capsella rubella]
          Length = 443

 Score =  183 bits (465), Expect = 2e-43
 Identities = 124/383 (32%), Positives = 186/383 (48%), Gaps = 29/383 (7%)
 Frame = +2

Query: 86   WFSSDVGNNTLLDCHEYRYDKYPQPFIPHTELRKKIYEKRFGQKKLKKGQTDERWIR--G 259
            WF S+    T  DC     D   Q  +   +L++K         KLK  +   RW++   
Sbjct: 73   WFHSNPVRETG-DCVSKSDDSLSQDGVGSIKLKRK---------KLKGKRAVVRWLKLFR 122

Query: 260  WLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDLVPEKPLNTIHDPEVLTPEEKMYY 430
            W + K   ++    +I  KL +AR++E   M+ M+ L P +   T HDPE+LTPEE  YY
Sbjct: 123  WKKKKEFERMTAEEKILNKLRKARKKEERLMETMQKLEPSESAETTHDPEILTPEEHFYY 182

Query: 431  CNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQKIPYDQIEKMAIELVQLTG 610
                 K +NYVPVG  GI  G+ILN HLHWKKH+T++ + +    D+++++A+EL +LTG
Sbjct: 183  LKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTG 242

Query: 611  GIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKKAYVVKILNALKIRIRNLE 790
            GIVL+++    + M+RGKNY  PPTE MSP+  L +++A  K+     L A++  I  LE
Sbjct: 243  GIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLE 302

Query: 791  RELQAFRGRLRG----PEIDYENEYRMIDA-----EYEDXXXXXXXXXXXXGVPSHEINE 943
            +ELQ  + +       P +  ++     +A     E                  S    +
Sbjct: 303  QELQLLQAQAETNQEYPNVKDDDTQESSEALKKIIERSQECLDDEQEEEEEDAGSELATD 362

Query: 944  SESRQVFESTS-CESKDIHR--------------NNQESQATSGPSQITENMEERDKPDE 1078
            S+   +FE+ S  E +   R              NN+E +    P +     EE D    
Sbjct: 363  SDLSDIFETDSELEDEKSERPLFLEEFEKFPAINNNREDEDFGDPEKAKSEGEENDDKSP 422

Query: 1079 NLNVLELDEIDRMFLPADPLLKK 1147
            N      DE+D+MFL A  LLKK
Sbjct: 423  N-----FDEVDKMFLRAASLLKK 440


>ref|XP_006852105.1| hypothetical protein AMTR_s00049p00011400 [Amborella trichopoda]
            gi|548855709|gb|ERN13572.1| hypothetical protein
            AMTR_s00049p00011400 [Amborella trichopoda]
          Length = 446

 Score =  179 bits (454), Expect = 3e-42
 Identities = 114/347 (32%), Positives = 184/347 (53%), Gaps = 36/347 (10%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   +W++ +      EY+ +    +I +KL +ARR+E    +  + + P++ 
Sbjct: 101  RKKLKGKRAVIKWLKFFRWQKKKEYERMTAEEKILYKLRKARRKEARLAEAWKKIEPKED 160

Query: 377  LNT-IHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQ 553
                 HDPE+LTPEE  YY     K +NYVP+G  GI  G+ILN HLHWKKH+T+K + +
Sbjct: 161  SGEPTHDPEILTPEEHFYYLKMGHKCKNYVPIGRRGIFQGVILNMHLHWKKHQTLKVIVK 220

Query: 554  KIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFK 733
                ++++++A EL +L+GGIVL+I+    + M+RGKNY+ PPTE MSP+  L++++A  
Sbjct: 221  TFTPEEVQELASELARLSGGIVLDIHEGNTIIMYRGKNYSQPPTEIMSPRVTLSRKKALD 280

Query: 734  KAYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYED--XXXXXXXXX 907
            K+     L A++I I  LEREL+  + +++      E+E R++  E              
Sbjct: 281  KSKFRDGLRAVRIFIPRLERELEVLQAQMK-----KEHEQRLVAQEENPTIELQQSVESE 335

Query: 908  XXXGVPSHEINESESRQVFESTSCES---KDIHRNNQESQATSGPSQI---------TEN 1051
                + +   ++ +S   F   S ES    DI  ++ ES +  G   +         ++ 
Sbjct: 336  ASNSIKTFNTSKEDSMPEFSDPSLESDSLSDIFESDTESCSEEGEKALYLDEIEGLPSDE 395

Query: 1052 MEERDKPDENL----------------NVLELDEIDRMFLPADPLLK 1144
             EE D  +E+L                N+ ELDE+D+MFL A  LLK
Sbjct: 396  GEESDDFEEHLRRISGDRKRMDWPENDNMPELDEVDKMFLRAGSLLK 442


>ref|XP_006492218.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 437

 Score =  177 bits (450), Expect = 8e-42
 Identities = 116/349 (33%), Positives = 184/349 (52%), Gaps = 37/349 (10%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      EY+ +    +I +KL +AR++E   ++ ++ + P++ 
Sbjct: 94   RKKLKGKRAVVRWLKHFRYKKKKEYERMTAEEKILYKLRKARKKEERIVEGLKKIEPKES 153

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
                HDPE+LTPEE  Y+    RK +NYVPVG  GI  G+ILN HLHWKKH+T+K + + 
Sbjct: 154  SEMTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT 213

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               ++++++A EL +LTGGIVLEI+ +  + M+RGKNY  PPTE MSP+  L++++A  K
Sbjct: 214  FSAEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 273

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+EL+  R +    E   EN     DA  ED            
Sbjct: 274  SKYRDGLRAVRKYIPKLEQELELHRAQ---AETRAENR---SDAA-EDVQNTELDKPDFG 326

Query: 917  GVPSH---EINESESRQVFESTSCESKDIHRNNQESQATSGPSQI------------TEN 1051
             +PS      N+  +  +  S S +  DI   + E++ T   +++             +N
Sbjct: 327  SIPSMMECSENDPTTESLMASDSEDLSDIFETDSETE-TEEKAELRPLYLDQFDKFPVQN 385

Query: 1052 MEERDKPDENLNVLEL-----------------DEIDRMFLPADPLLKK 1147
             EE +  +E+L  + +                 DE+D+MFL A  LLKK
Sbjct: 386  DEEHEDFEEHLRQISIDLRNVKSLGKDEDSFHFDEVDKMFLRAASLLKK 434


>ref|XP_006492217.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 438

 Score =  177 bits (450), Expect = 8e-42
 Identities = 116/349 (33%), Positives = 184/349 (52%), Gaps = 37/349 (10%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      EY+ +    +I +KL +AR++E   ++ ++ + P++ 
Sbjct: 95   RKKLKGKRAVVRWLKHFRYKKKKEYERMTAEEKILYKLRKARKKEERIVEGLKKIEPKES 154

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
                HDPE+LTPEE  Y+    RK +NYVPVG  GI  G+ILN HLHWKKH+T+K + + 
Sbjct: 155  SEMTHDPEILTPEEHFYFLKMGRKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVIVKT 214

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               ++++++A EL +LTGGIVLEI+ +  + M+RGKNY  PPTE MSP+  L++++A  K
Sbjct: 215  FSAEEVKEIAAELARLTGGIVLEIHEENTIIMYRGKNYAQPPTEIMSPRITLSRKKALDK 274

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+EL+  R +    E   EN     DA  ED            
Sbjct: 275  SKYRDGLRAVRKYIPKLEQELELHRAQ---AETRAENR---SDAA-EDVQNTELDKPDFG 327

Query: 917  GVPSH---EINESESRQVFESTSCESKDIHRNNQESQATSGPSQI------------TEN 1051
             +PS      N+  +  +  S S +  DI   + E++ T   +++             +N
Sbjct: 328  SIPSMMECSENDPTTESLMASDSEDLSDIFETDSETE-TEEKAELRPLYLDQFDKFPVQN 386

Query: 1052 MEERDKPDENLNVLEL-----------------DEIDRMFLPADPLLKK 1147
             EE +  +E+L  + +                 DE+D+MFL A  LLKK
Sbjct: 387  DEEHEDFEEHLRQISIDLRNVKSLGKDEDSFHFDEVDKMFLRAASLLKK 435


>ref|XP_006418629.1| hypothetical protein EUTSA_v10002612mg [Eutrema salsugineum]
            gi|557096557|gb|ESQ37065.1| hypothetical protein
            EUTSA_v10002612mg [Eutrema salsugineum]
          Length = 315

 Score =  177 bits (450), Expect = 8e-42
 Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 23/304 (7%)
 Frame = +2

Query: 305  KLTQARRREHFFMKVMEDLVPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGI 484
            KL +AR++E   M+ M+ L P +   T+HDPE+LTPEE  +Y     K +NYVPVG  GI
Sbjct: 10   KLRKARKKEERLMETMKKLEPSESSETMHDPEILTPEEHFHYLKMGLKCKNYVPVGRRGI 69

Query: 485  SSGLILNTHLHWKKHETVKFLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGK 664
              G+ILN HLHWKKH+T++ + +    +++ ++A+EL +LTGGIVL+++    + M+RGK
Sbjct: 70   YQGVILNMHLHWKKHQTLQVVIKTFTPEEVNEIAVELARLTGGIVLDVHEGNTIIMYRGK 129

Query: 665  NYTTPPTEFMSPKCVLTKEEAFKKAYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYE 844
            NY  PPTE MSP+  L +++A  K+     L A++  I  LE+ELQ  + +    + DY 
Sbjct: 130  NYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKQ-DYP 188

Query: 845  NEYRMIDAEYEDXXXXXXXXXXXXGVPSHEINESESRQVFESTSCESKDIHRNNQ--ESQ 1018
            N  ++ D E +D                 +  E E  +   +T  +  DI   +   E++
Sbjct: 189  NVAKVDDGETQDRSEELKKIIERSQECLEDEQEEEDAESDLATDSDLSDIFETDSEPENE 248

Query: 1019 ATSGPSQITE--------NMEERDKPDENL-------------NVLELDEIDRMFLPADP 1135
                P  + E        N+EE +  DE+                   DE+D+MFL A  
Sbjct: 249  KAGRPLFLEEFEKFPARNNIEEEEDDDEDFCDPGKAKSGDEKDGSPGFDEVDKMFLRAAS 308

Query: 1136 LLKK 1147
            LLKK
Sbjct: 309  LLKK 312


>ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329445|gb|EFH59864.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  177 bits (449), Expect = 1e-41
 Identities = 116/336 (34%), Positives = 173/336 (51%), Gaps = 24/336 (7%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIR--GWLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++   W + K   ++    +I  KLT+AR++E   M+ M+ L P + 
Sbjct: 722  RKKLKGKRAVVRWLKFFRWKKKKEFERMTAEEKILNKLTKARKKEERLMETMKKLEPSES 781

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  YY     K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 782  AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKT 841

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D++ ++A+EL +LTGGIVL+++    + M+RGKNY  PPTE MSP+  L +++A  K
Sbjct: 842  FTPDEVNEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 901

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+ELQ  +      + + + EY  +  +               
Sbjct: 902  SKCRDALRAVRKYIPRLEQELQLLQA-----QAETKREYLNVKVDDIQERSDELKKIIER 956

Query: 917  GVPSHEINESESRQVFE-STSCESKDIHRNNQ--ESQATSGP---------SQITENMEE 1060
                 E  E E     E +T  +  DI   +   E + T  P           I  N E+
Sbjct: 957  SEECLEDEEEEEDAGSELATDSDLSDIFETDSELEDEKTVRPLFLEEFEKFPAINNNRED 1016

Query: 1061 RD------KPDENLNVL-ELDEIDRMFLPADPLLKK 1147
             D      + +EN +     DE+D+MFL A  LLKK
Sbjct: 1017 EDFGKAKSEGEENDDKSPNFDEVDKMFLRAASLLKK 1052


>gb|ESW17924.1| hypothetical protein PHAVU_007G279800g [Phaseolus vulgaris]
          Length = 463

 Score =  177 bits (448), Expect = 1e-41
 Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 34/349 (9%)
 Frame = +2

Query: 203  RFGQKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVP 367
            +  +KKLK  +   RW++ +      EY+ +    +I +KL +AR++E    + ++ + P
Sbjct: 113  KVNRKKLKGKRAVVRWMKFFRFKKKKEYERMTTEEKILYKLLKARKKEERLCEALKKIEP 172

Query: 368  EKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFL 547
             +   T HDPE+LTPEE  ++     K +NYVPVG  GI  G+ILN HLHWKKH+T+K +
Sbjct: 173  AESSETTHDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVV 232

Query: 548  FQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEA 727
             +    ++++++A+EL +LTGGIVL+I+    + M+RGKNYT PPTE MSP+  L++++A
Sbjct: 233  VKTFSAEEVKEIAVELARLTGGIVLDIHEDNTIIMYRGKNYTQPPTEIMSPRVSLSRKKA 292

Query: 728  FKKAYVVKILNALKIRIRNLERELQAFRGRLRG---PEIDYENEYRMIDAE----YEDXX 886
              K+     L A++  I  LE+EL+  + + +      ID  +  + ID E    ++   
Sbjct: 293  LDKSKYRDALRAVRRHIPRLEQELEILQAQFKSTAESNIDASDAIQKIDRERILNFQSEN 352

Query: 887  XXXXXXXXXXGVPSHEINESESRQVFESTSCESKDIHRNNQESQ---ATSGPSQITENME 1057
                       +   E +E++    F++ S +  DI   + + +       P  + E  +
Sbjct: 353  SDKLEELMNDKIGCTE-DETDMDSEFDTDSDKLSDIFETDSDVEKFTREEKPLYLDEFDK 411

Query: 1058 ERDKPDENLNVLE-------------------LDEIDRMFLPADPLLKK 1147
             R++ D   N  E                   LDE+DR+FL A   LKK
Sbjct: 412  FREQSDGETNDFEEHLRSLNSKYMGKDQHLPKLDEVDRIFLRATSFLKK 460


>dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1115

 Score =  175 bits (443), Expect = 5e-41
 Identities = 116/339 (34%), Positives = 175/339 (51%), Gaps = 27/339 (7%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      E++ +    +I  KL +AR++E   M+ M+ L P + 
Sbjct: 779  RKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSES 838

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  YY     K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 839  AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKT 898

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D+++++A+EL +LTGGIVL+++    + M+RGKNY  PPTE MSP+  L +++A  K
Sbjct: 899  FTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 958

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+ELQ  + +    + DY N     + E  +            
Sbjct: 959  SKCRDALRAVRKYIPRLEQELQLLQAQAE-TKRDYTNVKVDDNQERSEELKKIIERSEEC 1017

Query: 917  GVPSHEINE--------SESRQVFESTS-CESKDIHR-------------NNQESQATSG 1030
                 E +E        S+   +FE+ S  E     R             NN+E +    
Sbjct: 1018 LEDEQEEDEAGLELATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGD 1077

Query: 1031 PSQITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
              +     EE D  D++ N    DE+D+MFL A  LLKK
Sbjct: 1078 LGKAKSEGEEND-DDKSPN---FDEVDKMFLRAAFLLKK 1112


>ref|NP_189171.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
            gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName:
            Full=Uncharacterized CRM domain-containing protein
            At3g25440, chloroplastic; Flags: Precursor
            gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis
            thaliana] gi|332643490|gb|AEE77011.1| ceramide synthase
            [Arabidopsis thaliana]
          Length = 444

 Score =  175 bits (443), Expect = 5e-41
 Identities = 116/339 (34%), Positives = 175/339 (51%), Gaps = 27/339 (7%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      E++ +    +I  KL +AR++E   M+ M+ L P + 
Sbjct: 108  RKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSES 167

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  YY     K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 168  AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKT 227

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D+++++A+EL +LTGGIVL+++    + M+RGKNY  PPTE MSP+  L +++A  K
Sbjct: 228  FTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 287

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+ELQ  + +    + DY N     + E  +            
Sbjct: 288  SKCRDALRAVRKYIPRLEQELQLLQAQAE-TKRDYTNVKVDDNQERSEELKKIIERSEEC 346

Query: 917  GVPSHEINE--------SESRQVFESTS-CESKDIHR-------------NNQESQATSG 1030
                 E +E        S+   +FE+ S  E     R             NN+E +    
Sbjct: 347  LEDEQEEDEAGLELATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGD 406

Query: 1031 PSQITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
              +     EE D  D++ N    DE+D+MFL A  LLKK
Sbjct: 407  LGKAKSEGEEND-DDKSPN---FDEVDKMFLRAAFLLKK 441


>ref|NP_001078207.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
            gi|332643491|gb|AEE77012.1| ceramide synthase
            [Arabidopsis thaliana]
          Length = 380

 Score =  175 bits (443), Expect = 5e-41
 Identities = 116/339 (34%), Positives = 175/339 (51%), Gaps = 27/339 (7%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      E++ +    +I  KL +AR++E   M+ M+ L P + 
Sbjct: 44   RKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSES 103

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  YY     K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 104  AETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKT 163

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D+++++A+EL +LTGGIVL+++    + M+RGKNY  PPTE MSP+  L +++A  K
Sbjct: 164  FTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 223

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +     L A++  I  LE+ELQ  + +    + DY N     + E  +            
Sbjct: 224  SKCRDALRAVRKYIPRLEQELQLLQAQAE-TKRDYTNVKVDDNQERSEELKKIIERSEEC 282

Query: 917  GVPSHEINE--------SESRQVFESTS-CESKDIHR-------------NNQESQATSG 1030
                 E +E        S+   +FE+ S  E     R             NN+E +    
Sbjct: 283  LEDEQEEDEAGLELATDSDLSDIFETDSELEDAKTERPLFLEEFEKFPAINNREDEDFGD 342

Query: 1031 PSQITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
              +     EE D  D++ N    DE+D+MFL A  LLKK
Sbjct: 343  LGKAKSEGEEND-DDKSPN---FDEVDKMFLRAAFLLKK 377


>ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
            gi|241937904|gb|EES11049.1| hypothetical protein
            SORBIDRAFT_06g021160 [Sorghum bicolor]
          Length = 484

 Score =  174 bits (442), Expect = 7e-41
 Identities = 117/368 (31%), Positives = 184/368 (50%), Gaps = 56/368 (15%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRG--WLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   R+++   W + K + ++    +I +KL  AR++E   +  ++ + PE P
Sbjct: 116  RKKLKGRRAVTRFLKSLRWKKKKEIQRMTAEEKILYKLKLARKKEERLVAALKKIEPEDP 175

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
                HDPEVLTPEE  Y+    +K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 176  SEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKT 235

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               ++++++A EL +L+GGIVL+I     + M+RGKNY  PP E MSPK  L++++A  K
Sbjct: 236  FTPEEVKEIATELARLSGGIVLDIQDGNTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDK 295

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLR-GPEIDYENEYRMIDAEYEDXXXXXXXXXXX 913
            +  ++ L AL+  I  LE+EL+    +++   E   ++  + I +   D           
Sbjct: 296  SKYMEKLRALRRYIPRLEQELEDLHAQMKLAGEHKGQSVGKHIASISHDTNSVPARKEPC 355

Query: 914  XGVPSHEIN-------------ESESRQVFESTSCES---------KDIHRNNQESQATS 1027
              V S  ++             E ES +V + ++ ES          DI     E Q   
Sbjct: 356  SSVHSKTVSDLLSGSVEGSKRLEDESSEVEDDSASESLSFSESEDLSDIFETESEEQEED 415

Query: 1028 G-------------PSQITEN---------------MEERDKPDENLNVLELDEIDRMFL 1123
                          PS+  +N                ++ D P + L V ELDEID++FL
Sbjct: 416  KKDHPLYLDRLDKFPSEKNDNEPDDFEEHLRKIASLSDKTDSPSKELKVSELDEIDKIFL 475

Query: 1124 PADPLLKK 1147
             A  LLKK
Sbjct: 476  RASSLLKK 483


>gb|EPS72053.1| hypothetical protein M569_02705, partial [Genlisea aurea]
          Length = 350

 Score =  174 bits (441), Expect = 9e-41
 Identities = 111/352 (31%), Positives = 178/352 (50%), Gaps = 40/352 (11%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      +Y+ +    +I FKL +AR++    ++ ++ + P++ 
Sbjct: 2    RKKLKGKRAVVRWLKFFRYKKKRDYERMTPEEKILFKLNKARKKHERILEALKKIEPKET 61

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  Y+     K +NYVPVG  GI  G+ILN HLHWKKHET+K   + 
Sbjct: 62   SETKHDPEILTPEEHFYFLKMGEKSKNYVPVGRRGIYKGVILNMHLHWKKHETLKVYVKT 121

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D++ ++A+EL +L+GGIVL+I     + M+RGKNY  PPTE MSP+  L++++A  K
Sbjct: 122  FSPDEVREIAVELARLSGGIVLDIQDDDTIIMYRGKNYAQPPTEIMSPRTTLSRKKALDK 181

Query: 737  AYVVKILNALKIRIRNLERELQAFR------GRLRGPEIDYENEYRMIDAEYEDXXXXXX 898
            +     L A+K  I  LE++L+  +      G+ +   + +++       ++ D      
Sbjct: 182  SKYRDSLRAVKRYIPRLEQDLELLKTQNENDGKQQPTVVGHDSS----SEKFRDGKKLME 237

Query: 899  XXXXXXGVPSHEINESES-----RQVFESTSCESKDIHRNNQESQATSGP---------- 1033
                     S ++ ++ES       +FE+ S  S DI + +        P          
Sbjct: 238  LLADDEHSHSDDVEDTESDSEALSDIFETDS--SSDIEKEDDGVAERRSPLLDVFDKIPM 295

Query: 1034 --SQITENMEERDKPDENLNVL------------ELDEIDRMFLPADPLLKK 1147
               +  +  EE D  D+    L            ELDE+DRM L A  +LKK
Sbjct: 296  RKEEEDDEEEEEDGDDDFEEYLRRVSDDSRNERRELDEVDRMILKAASVLKK 347


>ref|XP_006366821.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Solanum tuberosum]
          Length = 464

 Score =  173 bits (438), Expect = 2e-40
 Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 40/357 (11%)
 Frame = +2

Query: 197  EKRFGQKKLKKGQTDERWIR--GWLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDL 361
            E +  +KKLK  +   +W++   W + K   ++    +I FKL +AR++E   ++ +  +
Sbjct: 105  EDKIKRKKLKGKRQVVKWLKFFRWKKKKEFQRMTAEERILFKLRKARKKEERLVEALRKV 164

Query: 362  VPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVK 541
             P++     HDPE+LTPEE  Y+     K +NYVPVG  GI  G+ILN HLHWKKH+T+K
Sbjct: 165  EPKEISEATHDPEILTPEEHFYFLKMGEKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLK 224

Query: 542  FLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKE 721
             + +    ++++++A+EL +L+GGIVL+I     + M+RGKNY+ PPTE MSP+  L+++
Sbjct: 225  VVVKTFSPEEVKEIAVELARLSGGIVLDIQDDDTIIMYRGKNYSQPPTEIMSPRSTLSRK 284

Query: 722  EAFKKAYVVKILNALKIRIRNLERELQAFRGRLRG-----------------------PE 832
            +A  K+     L A++  I  LE++L+  R +                           +
Sbjct: 285  KALDKSKYRDSLRAVERYIPRLEQDLELLRLQAENETDAPNKNQEVGLEKFHPEHRSDQQ 344

Query: 833  IDYENEYRMIDAEYE------------DXXXXXXXXXXXXGVPSHEINESESRQVFESTS 976
            I+  ++ + I  E E            D               S E +E ++ +      
Sbjct: 345  IEASDKLKRIMVENEEQGEENDSMVDTDICSDSEDLSDIFETDSEEEHEEKAEEPLYLDV 404

Query: 977  CESKDIHRNNQESQATSGPSQITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
             E   +  N  E        QI+ N+ +   P ++++   LDE+D++ L A  LLKK
Sbjct: 405  FEKFPVQSNGDEQDFEEHLRQISSNLRKEKSPGKDVDTPGLDEVDKIILQAASLLKK 461


>ref|XP_004242444.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Solanum lycopersicum]
          Length = 462

 Score =  172 bits (436), Expect = 3e-40
 Identities = 105/357 (29%), Positives = 182/357 (50%), Gaps = 40/357 (11%)
 Frame = +2

Query: 197  EKRFGQKKLKKGQTDERWIR--GWLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDL 361
            E +  +KKLK  +   +W++   W + K   ++    +I FKL +AR++E   ++ +  +
Sbjct: 103  EDKIKRKKLKGKRQVVKWLKFFRWKKKKEFQRMTAEERILFKLRKARKKEERLVEALRKV 162

Query: 362  VPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVK 541
             P++     HDPE+LTPEE  Y+     K +NYVPVG  GI  G+ILN HLHWKKH+T+K
Sbjct: 163  EPKEIPEATHDPEILTPEEHFYFLKMGEKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLK 222

Query: 542  FLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKE 721
             + +    ++++++A+EL +L+GGIVL+I     + M+RGKNY+ PPTE MSP+  L+++
Sbjct: 223  VVVKTFSPEEVKEIAVELARLSGGIVLDIQDDDTIIMYRGKNYSQPPTEIMSPRSTLSRK 282

Query: 722  EAFKKAYVVKILNALKIRIRNLERELQAFR----GRLRGPEIDYENEYRMIDAEYEDXXX 889
            +A  K+     L A++  I  LE++L+  R     +   P+ + E  +     E+     
Sbjct: 283  KALDKSKYRDSLRAVERYIPRLEQDLELLRLQAENKTDAPDKNQEAGFEKFQPEHRSDQQ 342

Query: 890  XXXXXXXXXGVPSHEINESESRQVFESTSC----ESKDIHRNNQESQ------------- 1018
                      +  +E    E+  + ++  C    +  DI   + E +             
Sbjct: 343  IEASDKLKRIMIENEEQSEENDSMVDTDICSDSEDLSDIFETDSEEEHEEKAEEPLYLDV 402

Query: 1019 ------ATSGPS--------QITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
                   ++G +        QI+ N  +   P ++++   LDE+D++ L A  LLKK
Sbjct: 403  FEKFPVQSNGDAQDFEEHLRQISSNSRKEKSPGKDVDTPGLDEVDKIILQATSLLKK 459


>ref|XP_004976062.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Setaria italica]
          Length = 483

 Score =  171 bits (433), Expect = 8e-40
 Identities = 111/367 (30%), Positives = 179/367 (48%), Gaps = 55/367 (14%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRG--WLEYKSLPKIG---QIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   R+++   W + + + ++    +I +KL  A+++E   +  ++ + PE P
Sbjct: 116  RKKLKGKRAVTRFLKSLRWKKKREIQRMTAEEKILYKLKLAQKKEERLLAALKKIEPEDP 175

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
                HDPEVLTPEE  Y+    +K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 176  SEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKT 235

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               D+++++A EL +L+GGIVL+I     + M+RGKNY  PP E MSPK  L +++A  K
Sbjct: 236  FTPDEVKEIATELARLSGGIVLDIQDGNTIIMYRGKNYVQPPPEIMSPKVTLPRKKALDK 295

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +   + L A++  I  LE+EL+    +++   +      + + +   +            
Sbjct: 296  SKYKEKLRAVRRYIPRLEQELEDLHAQMKLAGVHKGGVGKYVASVSHNANSMAAREESSI 355

Query: 917  GVPSHEIN-------------ESESRQVFESTSCES---------KDIHRNNQESQATSG 1030
             V    ++             E ES +V + ++ ES          DI     E Q    
Sbjct: 356  SVHKKTVSDLLSESVEGSKRLEDESSEVEDVSASESMSFSESEDLSDIFETESEEQEEDN 415

Query: 1031 -------------PSQITEN---------------MEERDKPDENLNVLELDEIDRMFLP 1126
                         PS+  +N                ++ D P + L V ELDEID++FL 
Sbjct: 416  KERPLYLDRLDKFPSENNDNEPDDFEEHLRKIASLSDKTDSPSKELKVSELDEIDKIFLR 475

Query: 1127 ADPLLKK 1147
            A  LLKK
Sbjct: 476  ASSLLKK 482


>ref|NP_001132081.1| hypothetical protein [Zea mays] gi|194693368|gb|ACF80768.1| unknown
            [Zea mays] gi|414586598|tpg|DAA37169.1| TPA: hypothetical
            protein ZEAMMB73_229116 [Zea mays]
            gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein
            ZEAMMB73_229116 [Zea mays]
          Length = 485

 Score =  171 bits (432), Expect = 1e-39
 Identities = 116/383 (30%), Positives = 185/383 (48%), Gaps = 51/383 (13%)
 Frame = +2

Query: 152  PQPFIPHTELRKKIYEKRFGQKKLKKGQTDERWIRGWLEYKSLPKIGQIKFKLTQARRRE 331
            P P    +EL+ K   K  G++ +       RW +   E++ +    +I +KL  AR++E
Sbjct: 104  PVPVDGSSELKPK-RTKLKGRRAVTNFLKSLRWKKK-KEFQRMTAEEKILYKLKLARKKE 161

Query: 332  HFFMKVMEDLVPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTH 511
               +  ++ + PE P    HDPEVLTPEE  Y+    +K +NYVPVG  GI  G+ILN H
Sbjct: 162  ERLVVALKKIEPEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMH 221

Query: 512  LHWKKHETVKFLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEF 691
            LHWKKH+T++ + +    ++++++AIEL  L+GGIVL+I     + M+RGKNY  PP E 
Sbjct: 222  LHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYAQPPPEI 281

Query: 692  MSPKCVLTKEEAFKKAYVVKILNALKIRIRNLERELQAFRGRLR-GPEIDYENEYRMIDA 868
            MSPK  L++++A  K+  ++ L AL+  I  LE+EL+    +++   E   +N  + + +
Sbjct: 282  MSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQMKLAGEHQGQNAGKHVAS 341

Query: 869  EYEDXXXXXXXXXXXXGVPSHEIN-------------ESESRQVFESTSCES-------- 985
               +             + +  ++             E ES  + + ++ ES        
Sbjct: 342  ISHNTNSMPVRKEPCGSIRNKTVSDLLSETVEGSKRLEDESSAIEDDSASESLSFTESED 401

Query: 986  -KDIHRNNQESQATSG---------------------PSQITENM-------EERDKPDE 1078
              DI     E Q                         P    E++       ++ D P +
Sbjct: 402  LSDIFETESEEQEEDNKDRPLYLDRLDKFPSGKNDNEPDDFEEHLRRIASLSDKTDSPSK 461

Query: 1079 NLNVLELDEIDRMFLPADPLLKK 1147
             L V ELDEID++FL A  LLKK
Sbjct: 462  ELKVSELDEIDKIFLRASSLLKK 484


>ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Cucumis sativus]
            gi|449516505|ref|XP_004165287.1| PREDICTED:
            uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Cucumis sativus]
          Length = 500

 Score =  169 bits (428), Expect = 3e-39
 Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 49/361 (13%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIR--GWL---EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++   W    EY+ +    +I FK+ +AR++E   ++ +E + P   
Sbjct: 142  RKKLKGKRAVVRWLKLFRWKKKKEYERMTSEEKILFKMNKARKKEKRLVEALEKIEPADS 201

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
             +T HDPE+LTPEE  Y+     K +NYVPVG  GI  G+ILN HLHWKKH+TVK + + 
Sbjct: 202  SDTTHDPEILTPEEHFYFLKMGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKT 261

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               ++++++A EL +LTGG+VL+I+ +  + M+RGKNY+ PPTE MSP+  L++++A  K
Sbjct: 262  FSPEEVKEIAAELARLTGGLVLDIHEEDTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDK 321

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLR------GPEI--------------------- 835
            +     L A++  I  LE+EL+  + + +      G  +                     
Sbjct: 322  SKYRDGLRAVRKHIPKLEQELRFLQSQAKLNCKSNGESVEHMQETVDDTNKSKAISSLNL 381

Query: 836  ----DYENEYRMIDAEYEDXXXXXXXXXXXXGVPSHEINESE-------------SRQVF 964
                D  N  R +  ++ D                 ++ E++               + F
Sbjct: 382  ENLDDSSNAMRSVSKDWSDDSSPIDTGMSSDSEDLSDMFETDIDSEADEKMEKPLFLKEF 441

Query: 965  ESTSCESKDIHRNNQESQATSGPSQITENMEERDKPDENLNVLELDEIDRMFLPADPLLK 1144
            E+ + E++D     +    +    QI+ + ++    + ++N  E DE+DR+FL +  LLK
Sbjct: 442  ENFAAETED-----EIEDLSDQLRQISMDSKQAKILENDVNSPEFDEVDRLFLRSASLLK 496

Query: 1145 K 1147
            K
Sbjct: 497  K 497


>ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Vitis vinifera]
          Length = 401

 Score =  168 bits (426), Expect = 5e-39
 Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 50/367 (13%)
 Frame = +2

Query: 197  EKRFGQKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDL 361
            E +  +KKLK  +   RW++ +      EY+ +    +I +KL +ARR+E    + +  +
Sbjct: 39   ETKVKRKKLKGKRAVVRWLKFFRWKKKKEYERMTAEEKILYKLRKARRKEERLAEALTKI 98

Query: 362  VPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVK 541
             P++   T HDPE+LTPEE  ++     K +NYVP+G  GI  G+ILN HLHWKKH+T++
Sbjct: 99   EPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQ 158

Query: 542  FLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKE 721
             + +    ++++++A+EL +LTGGIVL+I+ +  + M+RGKNY+ PPTE MSP+  L+++
Sbjct: 159  VVVKTFSPEEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRITLSRK 218

Query: 722  EAFKKAYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXX 901
            +A  K+     L A++  I  LE +L+  + + +   +  EN+   +    ED       
Sbjct: 219  KALDKSKYRDGLRAVRKYIPRLEGDLELLQAQAK---MQAENKTEAV----EDFQNANID 271

Query: 902  XXXXXGVP----------------SHEINESESRQVFESTSCES--KDIHRNNQESQATS 1027
                 G+                 ++E +E ES     + SC     DI  ++ ++    
Sbjct: 272  SINSQGISNLQPENSDKLRELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKE 331

Query: 1028 GPSQI----------------TENMEERDKP-----------DENLNVLELDEIDRMFLP 1126
               Q+                 E+ EE  +            +++ ++ +LDE+D+MFL 
Sbjct: 332  KAEQLLYLNEFEKFPVESDGEPEDFEEHLRQISADSRKAKSLEKDADLPQLDEVDQMFLR 391

Query: 1127 ADPLLKK 1147
            A  LLKK
Sbjct: 392  AASLLKK 398


>gb|ACR34824.1| unknown [Zea mays] gi|414586597|tpg|DAA37168.1| TPA: hypothetical
            protein ZEAMMB73_229116 [Zea mays]
          Length = 342

 Score =  168 bits (425), Expect = 7e-39
 Identities = 106/336 (31%), Positives = 166/336 (49%), Gaps = 51/336 (15%)
 Frame = +2

Query: 293  QIKFKLTQARRREHFFMKVMEDLVPEKPLNTIHDPEVLTPEEKMYYCNKARKKRNYVPVG 472
            +I +KL  AR++E   +  ++ + PE P    HDPEVLTPEE  Y+    +K +NYVPVG
Sbjct: 6    KILYKLKLARKKEERLVVALKKIEPEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVG 65

Query: 473  ISGISSGLILNTHLHWKKHETVKFLFQKIPYDQIEKMAIELVQLTGGIVLEIYGKTVLTM 652
              GI  G+ILN HLHWKKH+T++ + +    ++++++AIEL  L+GGIVL+I     + M
Sbjct: 66   RRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQDGNTIIM 125

Query: 653  FRGKNYTTPPTEFMSPKCVLTKEEAFKKAYVVKILNALKIRIRNLERELQAFRGRLR-GP 829
            +RGKNY  PP E MSPK  L++++A  K+  ++ L AL+  I  LE+EL+    +++   
Sbjct: 126  YRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQMKLAG 185

Query: 830  EIDYENEYRMIDAEYEDXXXXXXXXXXXXGVPSHEIN-------------ESESRQVFES 970
            E   +N  + + +   +             + +  ++             E ES  + + 
Sbjct: 186  EHQGQNAGKHVASISHNTNSMPVRKEPCGSIRNKTVSDLLSETVEGSKRLEDESSAIEDD 245

Query: 971  TSCES---------KDIHRNNQESQATSG---------------------PSQITENM-- 1054
            ++ ES          DI     E Q                         P    E++  
Sbjct: 246  SASESLSFTESEDLSDIFETESEEQEEDNKDRPLYLDRLDKFPSGKNDNEPDDFEEHLRR 305

Query: 1055 -----EERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
                 ++ D P + L V ELDEID++FL A  LLKK
Sbjct: 306  IASLSDKTDSPSKELKVSELDEIDKIFLRASSLLKK 341


>ref|XP_004290124.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 450

 Score =  167 bits (422), Expect = 1e-38
 Identities = 105/357 (29%), Positives = 184/357 (51%), Gaps = 45/357 (12%)
 Frame = +2

Query: 212  QKKLKKGQTDERWIRGWL-----EYKSLPKIGQIKFKLTQARRREHFFMKVMEDLVPEKP 376
            +KKLK  +   RW++ +      +++ + +  +I FKL +A+++E   ++ +  + P + 
Sbjct: 94   RKKLKGKRAVVRWLKFFRYKKKKDFERMTQEEKILFKLRKAQKKEERLLEALRKIEPRES 153

Query: 377  LNTIHDPEVLTPEEKMYYCNKARKKRNYVPVGISGISSGLILNTHLHWKKHETVKFLFQK 556
              T HDPE+LTPEE  ++     K +NYVPVG  GI  G+ILN HLHWKKH+T++ + + 
Sbjct: 154  AETAHDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVRT 213

Query: 557  IPYDQIEKMAIELVQLTGGIVLEIYGKTVLTMFRGKNYTTPPTEFMSPKCVLTKEEAFKK 736
               ++++ +A EL +LTGGIVL I+ +  + M+RGKNY+ PPTE MSP+  L++++A  K
Sbjct: 214  FSPEEVKDIASELARLTGGIVLGIHEEYTIIMYRGKNYSQPPTEIMSPRITLSRKKALDK 273

Query: 737  AYVVKILNALKIRIRNLERELQAFRGRLRGPEIDYENEYRMIDAEYEDXXXXXXXXXXXX 916
            +  +  L A++  I  LE++L+  R + +  ++++ ++   I+   E             
Sbjct: 274  SKYMDGLRAVRKHIPKLEQDLELLRAQAK-RKVEFSSD--AIEETPEGIQSVESGSSSNI 330

Query: 917  GV-PSHEINESESR------------QVFESTSCESKDIHRNNQESQATSGPS------- 1036
             + PS ++ E   R            +   S S +  DI   + E ++ +          
Sbjct: 331  NLEPSDKLKEILDRAKEIPEDDPVTDEDMASDSEDLSDIFETDSEKESENKVQRPLYLEE 390

Query: 1037 --------------------QITENMEERDKPDENLNVLELDEIDRMFLPADPLLKK 1147
                                QI+ + ++   P+EN  +   DE+DR+FL A  LLKK
Sbjct: 391  FEKFLVESDGEPDDFEDHLRQISMDSKKAKSPNENAGLPNFDEVDRIFLRAASLLKK 447


Top