BLASTX nr result
ID: Ephedra28_contig00007376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00007376
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 124 2e-26
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 120 2e-25
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 120 2e-25
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 119 3e-25
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 117 2e-24
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha... 115 6e-24
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 114 2e-23
ref|XP_006396740.1| hypothetical protein EUTSA_v10028564mg [Eutr... 110 2e-22
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 108 6e-22
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A... 107 1e-21
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 105 8e-21
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 104 1e-20
gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indi... 104 1e-20
gb|EOY28872.1| Transcription activators,DNA binding,RNA polymera... 104 1e-20
gb|EOY28871.1| Transcription activators,DNA binding,RNA polymera... 104 1e-20
gb|EOY28870.1| Transcription activators,DNA binding,RNA polymera... 104 1e-20
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera... 104 1e-20
gb|AAN04997.1| putative transcription initiation factor [Oryza s... 104 1e-20
gb|EEE50676.1| hypothetical protein OsJ_30924 [Oryza sativa Japo... 104 1e-20
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe... 102 4e-20
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 124 bits (310), Expect = 2e-26
Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK + N I LSPVLAPKQK VPKEEP +++P K
Sbjct: 236 KSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSA 295
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
P + +T P +K+ KGKRK +D K KK+KT +E K +
Sbjct: 296 PASARSTPPT-SKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTAT 354
Query: 356 TKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
K T K+ +T SA VTEDE+RA++ Q+ P++ Q LVA++KARLK+ EDK+ FA
Sbjct: 355 AKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFA 412
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 120 bits (301), Expect = 2e-25
Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK + N I LSPVLAPKQK VPKEEP +++P K
Sbjct: 335 KSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-S 393
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
TA ++P +K+ KGKRK +D K KK+KT +E K +
Sbjct: 394 ATASARSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTAT 453
Query: 356 TKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
K T K+ +T SA VTEDE+RA++ Q+ P++ Q LVA++KARLK+ EDK+ FA
Sbjct: 454 PKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFA 511
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 120 bits (301), Expect = 2e-25
Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK + N I LSPVLAPKQK VPKEEP +++P K
Sbjct: 340 KSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMK-S 398
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
TA ++P +K+ KGKRK +D K KK+KT +E K +
Sbjct: 399 ATASARSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTAT 458
Query: 356 TKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
K T K+ +T SA VTEDE+RA++ Q+ P++ Q LVA++KARLK+ EDK+ FA
Sbjct: 459 PKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFA 516
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 119 bits (299), Expect = 3e-25
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK--VPKEEPWESTPTKEK 175
KSGKELK+LLGK + +SPVLAPKQK VPKEE + +P K
Sbjct: 340 KSGKELKKLLGKANGLNESDVEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAKPT 399
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEK---T 346
P+ +P+ +K+ KGKRK ED K + +KK+KT +E V AVKEE T
Sbjct: 400 PSGSAKGTPSTSKSAKGKRKLNGEDAKSSNGAPVKKVKTENE-----VKPAVKEESSPAT 454
Query: 347 NNSTKPTSQVPNKSI--TTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQ 520
+ P P+ T+ S VTE+E+RA++ Q P++ Q LVAR+K+RL+T EDK+
Sbjct: 455 KGTATPKVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKK 514
Query: 521 YFA 529
FA
Sbjct: 515 AFA 517
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 117 bits (293), Expect = 2e-24
Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK--VPKEEPWESTPTKEK 175
KSGKELK+LLGK + +SPVLAPKQK VPKEEP +++P K
Sbjct: 340 KSGKELKKLLGKANGLNESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPT 399
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
P +P+ +K+ KGKRK +D K + +KK+KT +E V VKEE ++ +
Sbjct: 400 PPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAPVKKVKTENE-----VKPTVKEE-SSPA 453
Query: 356 TKPTSQ---VPNKSITTQSA---VAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDK 517
TK T+ +P+ S T ++ VTE+E+RA++ Q P++ Q LVAR+K+RL+T EDK
Sbjct: 454 TKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDK 513
Query: 518 QYFA 529
+ FA
Sbjct: 514 KAFA 517
>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
Length = 483
Score = 115 bits (288), Expect = 6e-24
Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA--NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKE 172
KSGKELK+LLG+ + I +SP +APKQK KEEP E++P K
Sbjct: 285 KSGKELKKLLGRAGGLNDSDAEDDDDSEEMDEDIGVSPTVAPKQKDAVKEEPAENSPAKP 344
Query: 173 KPTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNN 352
P+A +P +K+ KGKRK +D KP KK+KT +E K N
Sbjct: 345 TPSASAKGTPTTSKSAKGKRKLNGDDVKPANVAPSKKVKTENEQKPSE---PAPPSKNNV 401
Query: 353 STKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
+K T K+ T SA VTE+E+RA++ Q+ P++ Q LVA+++ARL+T DK FA
Sbjct: 402 PSKGTPSSSTKAAVTSSAGPVTEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNAFA 460
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
[Ricinus communis]
Length = 533
Score = 114 bits (284), Expect = 2e-23
Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 3/179 (1%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA--NXXXXXXXXXXXXXXXIALSPVLAPKQKVPKEEPWESTPTKEK 175
KSGKELK+LLG+ + +++SPVLAPKQ PKEEP +++P K
Sbjct: 338 KSGKELKKLLGRAGGLNDSDAEDDDDDDDMDEDVSISPVLAPKQ-TPKEEPADNSPAKPM 396
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
+A + +P+ +K+ KGKRK +++ K KK+KT +E + VKEE S
Sbjct: 397 TSASSKGTPSTSKSAKGKRKLNSDEAKQTNVAPQKKVKTENE-----LKPTVKEESAPTS 451
Query: 356 -TKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
+ T + S T S VTE+E+RA++ Q P++ Q LVAR+K+RLK++EDK+ FA
Sbjct: 452 KSSATPKAAPPSAKTGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFA 510
>ref|XP_006396740.1| hypothetical protein EUTSA_v10028564mg [Eutrema salsugineum]
gi|557097757|gb|ESQ38193.1| hypothetical protein
EUTSA_v10028564mg [Eutrema salsugineum]
Length = 542
Score = 110 bits (276), Expect = 2e-22
Identities = 76/185 (41%), Positives = 103/185 (55%), Gaps = 9/185 (4%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK + N P+ KQK KEEP ESTP K
Sbjct: 339 KSGKELKKLLGKSNGLNESDEEDDDDSDDDEETNFGPITNSKQKDATKEEPVESTPPKPA 398
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
P+ + +P+ K KGKRK + D K +S KK+KT SE ++VKEEK+N+
Sbjct: 399 PSVSSRGTPSA-KPSKGKRKLNDGDAKKPSSSVQKKVKTESESKS----SSVKEEKSNSI 453
Query: 356 TK---PTSQVPNKSITTQSAVA----VTEDELRAIIKQEPPISAQQLVARYKARLKTAED 514
+K PT V +S + +A A VTEDE+R ++ ++ ++ Q LV+R+KARLKT ED
Sbjct: 454 SKSNAPTKAVKPESTSAPAASAATGPVTEDEIRGVLMEKKQVTTQDLVSRFKARLKTKED 513
Query: 515 KQYFA 529
K FA
Sbjct: 514 KNAFA 518
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 108 bits (271), Expect = 6e-22
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK--VPKEEPWESTPTKEK 175
KSGKELK+LLGK + +SPVLAPKQK VPKEEP +++P K
Sbjct: 340 KSGKELKKLLGKANGLNESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPT 399
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
P +P+ +K+ KGKRK +D K + +KK V VKEE ++ +
Sbjct: 400 PPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAPVKK----------EVKPTVKEE-SSPA 448
Query: 356 TKPTSQ---VPNKSITTQSAVA---VTEDELRAIIKQEPPISAQQLVARYKARLKTAEDK 517
TK T+ +P+ S T ++ VTE+E+RA++ Q P++ Q LVAR+K+RL+T EDK
Sbjct: 449 TKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDK 508
Query: 518 QYFA 529
+ FA
Sbjct: 509 KAFA 512
>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
gi|548861791|gb|ERN19162.1| hypothetical protein
AMTR_s00061p00167160 [Amborella trichopoda]
Length = 558
Score = 107 bits (268), Expect = 1e-21
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA--NXXXXXXXXXXXXXXXIALSPVLAPKQKVPKEEPWESTPTKEK 175
KSG+ELK+LLG+ + S VLAPKQK KEEP +++PTK
Sbjct: 353 KSGRELKKLLGRAGGLNESDGDDDDDDDDLDDDMGTSSVLAPKQKEVKEEPVDNSPTKTA 412
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
+ +P+ +K+ K KRK ++D KP AS KK K + DSK + S
Sbjct: 413 TSGSNRGTPSTSKSTKAKRKSGSDDAKPAASAPSKKPK-IENDSKPATTVKDEPASAQRS 471
Query: 356 TKPTSQVPNKSIT------TQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDK 517
P ++P+ S T +AV VTEDE+RA++ Q P++ Q LV ++KARL+T EDK
Sbjct: 472 NTPV-KLPSSSGTKPAGSPVAAAVPVTEDEIRAVLLQMAPVTTQDLVGKFKARLRTKEDK 530
Query: 518 QYFAS 532
FA+
Sbjct: 531 DSFAA 535
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 105 bits (261), Expect = 8e-21
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK + N PV KQK V KEEP E+ P K
Sbjct: 338 KSGKELKKLLGKANGLNESDEDDDDDSDDEEETNFGPVTNSKQKEVAKEEPVENAPAKPT 397
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNS 355
P+ + +P K KGKRK + D+K +S KK+KT ++ ++VKEE+ N
Sbjct: 398 PSGPSRGTPPA-KPSKGKRKLNDGDSKKPSSSVQKKVKTENDPK-----SSVKEERANTV 451
Query: 356 TKPTSQVPNKSITTQSAVA-----------VTEDELRAIIKQEPPISAQQLVARYKARLK 502
+K S P K++ + A A VTEDE+RA++ ++ ++ Q LV+R+KARLK
Sbjct: 452 SK--SNTPTKAVKAEPASAPAASSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLK 509
Query: 503 TAEDKQYFAS 532
T EDK FA+
Sbjct: 510 TKEDKNAFAN 519
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 104 bits (260), Expect = 1e-20
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA---NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTK 169
KSGKELK+LLGK S + + + PV+A KQK KEEP +++P+K
Sbjct: 337 KSGKELKKLLGKASGLNESDAEDDDDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSPSK 396
Query: 170 EKPTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTN 349
T +P+ +K+ KGKRK NE+TKP+ + + KK +S +K +A K
Sbjct: 397 PTATGPARGTPS-SKSSKGKRKL-NEETKPSNTATPKKEPKLS--AKDVNGSASKSSAPP 452
Query: 350 NSTKPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
T P S S TT ++ V+E+E+RA+++Q+ P++ Q LVA++KARL+ +EDKQ FA
Sbjct: 453 KGTPPLSSKGGSSTTTTASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFA 512
>gb|EAY77905.1| hypothetical protein OsI_32946 [Oryza sativa Indica Group]
Length = 532
Score = 104 bits (260), Expect = 1e-20
Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEKP 178
KSGKELK+LLGK + SPVLAPKQK PK+EP +++P K P
Sbjct: 336 KSGKELKKLLGKAAGLNESDADEDDEDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTP 395
Query: 179 TAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNST 358
+ +P +K+ + ++ +D+K + + KK K V D+K +V +++T +S+
Sbjct: 396 SGHARGTPPASKSKQKRKSGGGDDSKASGGAASKKAK-VESDTKT----SVAKDETPSSS 450
Query: 359 KPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
KP S+ S T+ + VTEDE+R ++ P++ Q LV+R+K+RL+ EDK FA
Sbjct: 451 KPASKATAASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFA 507
>gb|EOY28872.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
Length = 480
Score = 104 bits (259), Expect = 1e-20
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK N ++ +P A KQK PKEEP +++P K
Sbjct: 266 KSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPA 325
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKT-------VSEDSKVHVLAAVK 334
+A + +K+ KGKRK +DTK + LKK+K+ V E+S +V
Sbjct: 326 SSASARGTSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVP 385
Query: 335 EEKTNNSTKPTSQVPNKSITTQSAVA--------VTEDELRAIIKQEPPISAQQLVARYK 490
+ T +S K S + ++T+ SA A VTE+E+RA++ Q+ P++ LVA++K
Sbjct: 386 PKGTPSSAKAGST--SSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFK 443
Query: 491 ARLKTAEDKQYFA 529
ARLK+ EDK+ FA
Sbjct: 444 ARLKSPEDKKAFA 456
>gb|EOY28871.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 3 [Theobroma cacao]
Length = 496
Score = 104 bits (259), Expect = 1e-20
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK N ++ +P A KQK PKEEP +++P K
Sbjct: 282 KSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPA 341
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKT-------VSEDSKVHVLAAVK 334
+A + +K+ KGKRK +DTK + LKK+K+ V E+S +V
Sbjct: 342 SSASARGTSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVP 401
Query: 335 EEKTNNSTKPTSQVPNKSITTQSAVA--------VTEDELRAIIKQEPPISAQQLVARYK 490
+ T +S K S + ++T+ SA A VTE+E+RA++ Q+ P++ LVA++K
Sbjct: 402 PKGTPSSAKAGST--SSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFK 459
Query: 491 ARLKTAEDKQYFA 529
ARLK+ EDK+ FA
Sbjct: 460 ARLKSPEDKKAFA 472
>gb|EOY28870.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 2 [Theobroma cacao]
Length = 473
Score = 104 bits (259), Expect = 1e-20
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK N ++ +P A KQK PKEEP +++P K
Sbjct: 259 KSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPA 318
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKT-------VSEDSKVHVLAAVK 334
+A + +K+ KGKRK +DTK + LKK+K+ V E+S +V
Sbjct: 319 SSASARGTSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVP 378
Query: 335 EEKTNNSTKPTSQVPNKSITTQSAVA--------VTEDELRAIIKQEPPISAQQLVARYK 490
+ T +S K S + ++T+ SA A VTE+E+RA++ Q+ P++ LVA++K
Sbjct: 379 PKGTPSSAKAGST--SSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFK 436
Query: 491 ARLKTAEDKQYFA 529
ARLK+ EDK+ FA
Sbjct: 437 ARLKSPEDKKAFA 449
>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
Length = 549
Score = 104 bits (259), Expect = 1e-20
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA-NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEK 175
KSGKELK+LLGK N ++ +P A KQK PKEEP +++P K
Sbjct: 335 KSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPA 394
Query: 176 PTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKT-------VSEDSKVHVLAAVK 334
+A + +K+ KGKRK +DTK + LKK+K+ V E+S +V
Sbjct: 395 SSASARGTSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVP 454
Query: 335 EEKTNNSTKPTSQVPNKSITTQSAVA--------VTEDELRAIIKQEPPISAQQLVARYK 490
+ T +S K S + ++T+ SA A VTE+E+RA++ Q+ P++ LVA++K
Sbjct: 455 PKGTPSSAKAGST--SSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFK 512
Query: 491 ARLKTAEDKQYFA 529
ARLK+ EDK+ FA
Sbjct: 513 ARLKSPEDKKAFA 525
>gb|AAN04997.1| putative transcription initiation factor [Oryza sativa Japonica
Group] gi|31430629|gb|AAP52517.1| mutant TFIIF-alpha,
putative, expressed [Oryza sativa Japonica Group]
Length = 532
Score = 104 bits (259), Expect = 1e-20
Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEKP 178
KSGKELK+LLGK + SPVLAPKQK PK+EP +++P K P
Sbjct: 336 KSGKELKKLLGKAAGLNESDADEDDEDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTP 395
Query: 179 TAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNST 358
+ +P +K+ + ++ +D+K + + KK K V D+K +V +++T +S+
Sbjct: 396 SGHARGTPPASKSKQKRKSGGGDDSKASGGAASKKAK-VESDTK----PSVAKDETPSSS 450
Query: 359 KPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
KP S+ S T+ + VTEDE+R ++ P++ Q LV+R+K+RL+ EDK FA
Sbjct: 451 KPASKATAASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFA 507
>gb|EEE50676.1| hypothetical protein OsJ_30924 [Oryza sativa Japonica Group]
Length = 519
Score = 104 bits (259), Expect = 1e-20
Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 KSGKELKQLLGKRSANXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTKEKP 178
KSGKELK+LLGK + SPVLAPKQK PK+EP +++P K P
Sbjct: 323 KSGKELKKLLGKAAGLNESDADEDDEDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTP 382
Query: 179 TAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEEKTNNST 358
+ +P +K+ + ++ +D+K + + KK K V D+K +V +++T +S+
Sbjct: 383 SGHARGTPPASKSKQKRKSGGGDDSKASGGAASKKAK-VESDTK----PSVAKDETPSSS 437
Query: 359 KPTSQVPNKSITTQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQYFA 529
KP S+ S T+ + VTEDE+R ++ P++ Q LV+R+K+RL+ EDK FA
Sbjct: 438 KPASKATAASKTSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFA 494
>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 102 bits (255), Expect = 4e-20
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Frame = +2
Query: 2 KSGKELKQLLGKRSA---NXXXXXXXXXXXXXXXIALSPVLAPKQK-VPKEEPWESTPTK 169
KSGKELK+LLG+ + I APKQK KEEP +++P+K
Sbjct: 336 KSGKELKKLLGRTGGLDDSDAEDDDDDDDDMDDDIGFPQAAAPKQKDASKEEPSDNSPSK 395
Query: 170 EKPTAVTTTSPNGTKTVKGKRKFENEDTKPNASLSLKKIKTVSEDSKVHVLAAVKEE--K 343
P+ +P+ K+ KGKRK +D K + S KK+K+ +E + KEE
Sbjct: 396 PVPSGSARGTPSTAKSAKGKRKLSADDAKTSNSAPPKKVKSENEQK-----VSTKEEPAS 450
Query: 344 TNNSTKPTSQVPNKSIT-TQSAVAVTEDELRAIIKQEPPISAQQLVARYKARLKTAEDKQ 520
+ S+ P+ P+ + T S+ VTE+E+R ++ Q P++ Q LVAR+KARL+ EDK
Sbjct: 451 ASKSSTPSKGTPSVKVEPTSSSGPVTEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKT 510
Query: 521 YFAS 532
FA+
Sbjct: 511 AFAA 514