BLASTX nr result

ID: Ephedra28_contig00007305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00007305
         (545 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16884.1| unknown [Picea sitchensis]                              59   1e-06
gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]    56   6e-06

>gb|ABR16884.1| unknown [Picea sitchensis]
          Length = 581

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -3

Query: 540 EEAPHRVESGRDLRAQIYGRLSREASEIKEANRNADSPDLAWVNDLIK 397
           EE   RVESGR+LRA+IY RLSRE  +    N NA+SPDL WVN+L+K
Sbjct: 538 EEPLQRVESGRELRAKIYSRLSRENPD----NINAESPDLGWVNELVK 581


>gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]
          Length = 97

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/48 (52%), Positives = 39/48 (81%)
 Frame = -3

Query: 540 EEAPHRVESGRDLRAQIYGRLSREASEIKEANRNADSPDLAWVNDLIK 397
           EE   RVESG+DLRA+IY RL+RE + +++++ + +SPD+ WVN+L+K
Sbjct: 51  EEPVQRVESGKDLRAKIYARLTRE-NVLQDSSSSVESPDVGWVNELVK 97


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