BLASTX nr result
ID: Ephedra28_contig00007193
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00007193
(465 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006376453.1| hypothetical protein POPTR_0013s13190g [Popu... 121 1e-25
dbj|BAG49075.1| 30S ribosomal protein S16 [Populus alba] 121 1e-25
ref|XP_002330695.1| predicted protein [Populus trichocarpa] gi|1... 121 1e-25
gb|ABK23236.1| unknown [Picea sitchensis] 120 1e-25
gb|ABK23466.1| unknown [Picea sitchensis] 119 5e-25
gb|ABK93932.1| unknown [Populus trichocarpa] 118 7e-25
ref|XP_004287573.1| PREDICTED: 28S ribosomal protein S16, mitoch... 115 8e-24
ref|YP_005417711.1| 30S ribosomal protein S16 [Rhodospirillum ph... 115 8e-24
ref|WP_009813789.1| 30S ribosomal protein S16 [Roseovarius nubin... 114 2e-23
ref|WP_005863510.1| 30S ribosomal protein S16 [Sagittula stellat... 114 2e-23
ref|XP_006429728.1| hypothetical protein CICLE_v10013100mg [Citr... 113 2e-23
ref|NP_001062247.1| Os08g0517900 [Oryza sativa Japonica Group] g... 113 3e-23
ref|XP_002460467.1| hypothetical protein SORBIDRAFT_02g028880 [S... 113 3e-23
ref|XP_001751469.1| predicted protein [Physcomitrella patens] gi... 113 3e-23
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ... 113 3e-23
gb|EMJ03913.1| hypothetical protein PRUPE_ppa012786mg [Prunus pe... 112 4e-23
gb|EMJ03912.1| hypothetical protein PRUPE_ppa012786mg [Prunus pe... 112 4e-23
emb|CCO66811.1| 30S ribosomal protein S16 [Bathycoccus prasinos] 112 4e-23
ref|NP_001141389.1| 30S ribosomal protein S16 [Zea mays] gi|1947... 112 4e-23
ref|NP_001063564.1| Os09g0498100 [Oryza sativa Japonica Group] g... 112 5e-23
>ref|XP_006376453.1| hypothetical protein POPTR_0013s13190g [Populus trichocarpa]
gi|550325729|gb|ERP54250.1| hypothetical protein
POPTR_0013s13190g [Populus trichocarpa]
Length = 161
Score = 121 bits (303), Expect = 1e-25
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
V+IRLAR G K R FYRIVAAD+H+PRDG+ L++LGFYDPL K RR+ +N+D KYW
Sbjct: 54 VKIRLARLGCKNRAFYRIVAADSHTPRDGKHLQVLGFYDPLAAKGDARRLGLNVDLVKYW 113
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL--KKAPTATVS 454
LSVGAQP+DTVRGIL R G + P + KK P+ S
Sbjct: 114 LSVGAQPTDTVRGILMRAGLISPPPMVVMGQKKGPSGDTS 153
>dbj|BAG49075.1| 30S ribosomal protein S16 [Populus alba]
Length = 110
Score = 121 bits (303), Expect = 1e-25
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
V+IRLAR G K R FYRIVAAD+H+PRDG+ L++LGFYDPL K RR+ +N+D KYW
Sbjct: 3 VKIRLARLGCKNRAFYRIVAADSHTPRDGKHLQVLGFYDPLAAKGDARRLGLNVDLVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL--KKAPTATVS 454
LSVGAQP+DTVRGIL R G + P + KK P+ S
Sbjct: 63 LSVGAQPTDTVRGILMRAGLINPPPMVVMGQKKGPSGDTS 102
>ref|XP_002330695.1| predicted protein [Populus trichocarpa] gi|118488915|gb|ABK96266.1|
unknown [Populus trichocarpa x Populus deltoides]
Length = 110
Score = 121 bits (303), Expect = 1e-25
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
V+IRLAR G K R FYRIVAAD+H+PRDG+ L++LGFYDPL K RR+ +N+D KYW
Sbjct: 3 VKIRLARLGCKNRAFYRIVAADSHTPRDGKHLQVLGFYDPLAAKGDARRLGLNVDLVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL--KKAPTATVS 454
LSVGAQP+DTVRGIL R G + P + KK P+ S
Sbjct: 63 LSVGAQPTDTVRGILMRAGLISPPPMVVMGQKKGPSGDTS 102
>gb|ABK23236.1| unknown [Picea sitchensis]
Length = 117
Score = 120 bits (302), Expect = 1e-25
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +2
Query: 152 MGRVRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRA 331
MG VR+RL R GRKKRPFYRIV AD+ + RDG +E LG+YDPL KD E+R+K+N +RA
Sbjct: 1 MGGVRLRLTRLGRKKRPFYRIVVADSRARRDGNQIETLGYYDPLAGKDDEKRLKINPERA 60
Query: 332 KYWLSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
KYWLSVGAQPSDTV+ +L ++G + P A+ +
Sbjct: 61 KYWLSVGAQPSDTVQDLLFKSGVLPPPPMLAMMR 94
>gb|ABK23466.1| unknown [Picea sitchensis]
Length = 132
Score = 119 bits (297), Expect = 5e-25
Identities = 58/92 (63%), Positives = 70/92 (76%)
Frame = +2
Query: 152 MGRVRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRA 331
MG VR+RLARFG RPFYRIVAAD+ SPRDG+ LE+LG+Y+PL KD +R+ +N DRA
Sbjct: 1 MGVVRLRLARFGCSNRPFYRIVAADSRSPRDGKHLEVLGYYNPLPVKDGGKRMGLNFDRA 60
Query: 332 KYWLSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
KYWLSVGAQPSD V+ +L R G + P AL
Sbjct: 61 KYWLSVGAQPSDPVQRLLFRAGLLPPPPMLAL 92
>gb|ABK93932.1| unknown [Populus trichocarpa]
Length = 110
Score = 118 bits (296), Expect = 7e-25
Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
V+IRLAR G K R FYRIVAAD+H+PRDG+ L++LGFYDPL K RR+ +N+D KYW
Sbjct: 3 VKIRLARLGCKNRAFYRIVAADSHTPRDGKHLQVLGFYDPLAAKGDARRLGLNVDLVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL--KKAPTATVS 454
LSVGAQP+DTV GIL R G + P + KK P+ S
Sbjct: 63 LSVGAQPTDTVGGILMRAGLISPPPMVVMGQKKGPSGDTS 102
>ref|XP_004287573.1| PREDICTED: 28S ribosomal protein S16, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 164
Score = 115 bits (287), Expect = 8e-24
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG K RPFYR++AAD+ SPRDG+ LE+LG+Y+PL +D +R+ +N DR KYW
Sbjct: 3 VRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
LSVGAQPSD V+ IL R G + P+ A+ +
Sbjct: 63 LSVGAQPSDPVQRILFRAGMLPPTPMMAMAR 93
>ref|YP_005417711.1| 30S ribosomal protein S16 [Rhodospirillum photometricum DSM 122]
gi|504228273|ref|WP_014415375.1| 30S ribosomal protein
S16 [Rhodospirillum photometricum]
gi|378403625|emb|CCG08741.1| 30S ribosomal protein S16
[Rhodospirillum photometricum DSM 122]
Length = 139
Score = 115 bits (287), Expect = 8e-24
Identities = 59/97 (60%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
+RIRLAR G KKRPFYRIV AD+ SPRDGRF+E LG +DP++P+DHERRV + +R KYW
Sbjct: 20 LRIRLARGGAKKRPFYRIVVADSRSPRDGRFIEKLGSFDPMLPRDHERRVILKEERLKYW 79
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSA--EAALKKAPTA 445
L VGAQPSD V L G EP A E K P A
Sbjct: 80 LGVGAQPSDRVARFLGLAGLAEPRAVPEQTRKSQPRA 116
>ref|WP_009813789.1| 30S ribosomal protein S16 [Roseovarius nubinhibens]
gi|83839093|gb|EAP78389.1| ribosomal protein S16
[Roseovarius nubinhibens ISM]
Length = 134
Score = 114 bits (284), Expect = 2e-23
Identities = 55/92 (59%), Positives = 68/92 (73%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
++IRLAR G KKRPFYRIVAAD+ PRDGRF+E LG Y+PL+PKD E RVK++++R +YW
Sbjct: 3 MKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDMERVQYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKKA 436
L GAQP+D V L G +E A LKKA
Sbjct: 63 LGQGAQPTDRVSRFLEAAGVVEKKERANLKKA 94
>ref|WP_005863510.1| 30S ribosomal protein S16 [Sagittula stellata]
gi|126706800|gb|EBA05870.1| ribosomal protein S16
[Sagittula stellata E-37]
Length = 121
Score = 114 bits (284), Expect = 2e-23
Identities = 55/91 (60%), Positives = 68/91 (74%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
V+IRLAR G KKRPFYRIVAAD+ PRDGRF+E LG Y+PL+PKD E RVK++++R +YW
Sbjct: 3 VKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDLERIQYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
+S GAQP+D V L G +E A LKK
Sbjct: 63 MSHGAQPTDRVSRFLEAAGVIEKKERANLKK 93
>ref|XP_006429728.1| hypothetical protein CICLE_v10013100mg [Citrus clementina]
gi|567874279|ref|XP_006429729.1| hypothetical protein
CICLE_v10013100mg [Citrus clementina]
gi|568855461|ref|XP_006481323.1| PREDICTED: 28S
ribosomal protein S16, mitochondrial-like isoform X1
[Citrus sinensis] gi|568855463|ref|XP_006481324.1|
PREDICTED: 28S ribosomal protein S16, mitochondrial-like
isoform X2 [Citrus sinensis] gi|557531785|gb|ESR42968.1|
hypothetical protein CICLE_v10013100mg [Citrus
clementina] gi|557531786|gb|ESR42969.1| hypothetical
protein CICLE_v10013100mg [Citrus clementina]
Length = 131
Score = 113 bits (283), Expect = 2e-23
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG K +PFYR++AAD+ SPRDG+ LE+LG+Y+PL +D +R+ +N DR KYW
Sbjct: 3 VRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
LSVGAQPSD V+ IL R G + P A+
Sbjct: 63 LSVGAQPSDPVQRILFRAGLLPPPPMVAM 91
>ref|NP_001062247.1| Os08g0517900 [Oryza sativa Japonica Group]
gi|28411847|dbj|BAC57322.1| 30S ribosomal protein
S16-like [Oryza sativa Japonica Group]
gi|113624216|dbj|BAF24161.1| Os08g0517900 [Oryza sativa
Japonica Group] gi|125562195|gb|EAZ07643.1| hypothetical
protein OsI_29894 [Oryza sativa Indica Group]
gi|125604019|gb|EAZ43344.1| hypothetical protein
OsJ_27940 [Oryza sativa Japonica Group]
gi|215693867|dbj|BAG89066.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 137
Score = 113 bits (282), Expect = 3e-23
Identities = 54/89 (60%), Positives = 66/89 (74%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG + RPFYR++AAD+ SPRDG+ LE+LG+YDPL KD +R+ + DR KYW
Sbjct: 3 VRIRLARFGCRNRPFYRLMAADSRSPRDGKHLEVLGYYDPLPGKDGGKRMGLKFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
LSVGAQPSD V IL R G + P A+
Sbjct: 63 LSVGAQPSDPVERILYRAGILPPPPMLAM 91
>ref|XP_002460467.1| hypothetical protein SORBIDRAFT_02g028880 [Sorghum bicolor]
gi|241923844|gb|EER96988.1| hypothetical protein
SORBIDRAFT_02g028880 [Sorghum bicolor]
Length = 138
Score = 113 bits (282), Expect = 3e-23
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG + RPFYR++AAD+ SPRDG+ LE+LG+Y+PL KD +R+ + DR KYW
Sbjct: 3 VRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
LSVGAQPSD V+ IL R G + P A+ +
Sbjct: 63 LSVGAQPSDPVQSILFRAGLLPPPPMLAMAR 93
>ref|XP_001751469.1| predicted protein [Physcomitrella patens]
gi|162697450|gb|EDQ83786.1| predicted protein
[Physcomitrella patens]
Length = 97
Score = 113 bits (282), Expect = 3e-23
Identities = 57/94 (60%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFGRK PFYRI AD+ SPRDG+ LE++G Y+PL KD +R+ VN DR KYW
Sbjct: 2 VRIRLARFGRKNLPFYRIFVADSRSPRDGKHLEVVGHYNPLPGKDGMKRIGVNSDRIKYW 61
Query: 341 LSVGAQPSDTVRGILTRTGAM-EPSAEAALKKAP 439
LSVGAQPSDTVR +L + G + P KK P
Sbjct: 62 LSVGAQPSDTVRRLLNKAGILPAPPVPHMPKKGP 95
>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
gi|297738652|emb|CBI27897.3| unnamed protein product
[Vitis vinifera]
Length = 136
Score = 113 bits (282), Expect = 3e-23
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRL+RFG K RPFYR++AAD+ SPRDG+ LE+LG+Y+PL +D +R+ +N DR KYW
Sbjct: 3 VRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
LSVGAQPSD V+ IL R G + P A+
Sbjct: 63 LSVGAQPSDPVQQILFRAGLLPPPPMVAM 91
>gb|EMJ03913.1| hypothetical protein PRUPE_ppa012786mg [Prunus persica]
Length = 132
Score = 112 bits (281), Expect = 4e-23
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG K RPFYR++AAD+ SPRDG+ LE+LG+Y+PL +D +R+ +N +R KYW
Sbjct: 3 VRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
LSVGAQPSD V+ IL R G + P A+
Sbjct: 63 LSVGAQPSDPVQRILFRAGLLPPPPMVAM 91
>gb|EMJ03912.1| hypothetical protein PRUPE_ppa012786mg [Prunus persica]
Length = 154
Score = 112 bits (281), Expect = 4e-23
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG K RPFYR++AAD+ SPRDG+ LE+LG+Y+PL +D +R+ +N +R KYW
Sbjct: 3 VRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAAL 427
LSVGAQPSD V+ IL R G + P A+
Sbjct: 63 LSVGAQPSDPVQRILFRAGLLPPPPMVAM 91
>emb|CCO66811.1| 30S ribosomal protein S16 [Bathycoccus prasinos]
Length = 98
Score = 112 bits (281), Expect = 4e-23
Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG+K RPFYRI AD+ +PRDG+ LE++G YDP+ KD + V +NIDR KYW
Sbjct: 3 VRIRLARFGQKNRPFYRIFVADSRAPRDGKHLEVVGHYDPIPSKDSHKHVGLNIDRIKYW 62
Query: 341 LSVGAQPSDTVRGILTRT-----GAMEPSAEAALKK 433
LSVGAQPSDTVR IL++ SA AL+K
Sbjct: 63 LSVGAQPSDTVRRILSQAKIIPKAPTRGSAATALEK 98
>ref|NP_001141389.1| 30S ribosomal protein S16 [Zea mays] gi|194704294|gb|ACF86231.1|
unknown [Zea mays] gi|195622024|gb|ACG32842.1| 30S
ribosomal protein S16 [Zea mays]
gi|195658841|gb|ACG48888.1| 30S ribosomal protein S16
[Zea mays] gi|414886099|tpg|DAA62113.1| TPA: 30S
ribosomal protein S16 [Zea mays]
Length = 138
Score = 112 bits (281), Expect = 4e-23
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG + RPFYR++AAD+ SPRDG+ LE+LG+Y+PL KD +R+ + DR KYW
Sbjct: 3 VRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
LSVGAQPSD V+ IL R G + P A+ +
Sbjct: 63 LSVGAQPSDPVQSILFRAGLLPPPPLLAMAR 93
>ref|NP_001063564.1| Os09g0498100 [Oryza sativa Japonica Group]
gi|113631797|dbj|BAF25478.1| Os09g0498100 [Oryza sativa
Japonica Group] gi|125564238|gb|EAZ09618.1| hypothetical
protein OsI_31902 [Oryza sativa Indica Group]
gi|222641852|gb|EEE69984.1| hypothetical protein
OsJ_29887 [Oryza sativa Japonica Group]
Length = 136
Score = 112 bits (280), Expect = 5e-23
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +2
Query: 161 VRIRLARFGRKKRPFYRIVAADNHSPRDGRFLEILGFYDPLVPKDHERRVKVNIDRAKYW 340
VRIRLARFG + RPFYR++AAD+ SPRDG+ LE+LG+Y+PL KD +R+ + DR KYW
Sbjct: 3 VRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYW 62
Query: 341 LSVGAQPSDTVRGILTRTGAMEPSAEAALKK 433
LSVGAQPSD V+ IL R G + P A+ +
Sbjct: 63 LSVGAQPSDPVQRILFRAGLLPPPPMLAMAR 93