BLASTX nr result
ID: Ephedra28_contig00007103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00007103 (1587 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A... 493 e-137 ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 492 e-136 ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 491 e-136 ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 491 e-136 ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl... 490 e-136 ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor... 489 e-135 ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl... 489 e-135 ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor... 489 e-135 gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe... 488 e-135 ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [... 486 e-134 ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [... 484 e-134 gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus... 481 e-133 ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl... 481 e-133 ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor... 480 e-133 gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ... 480 e-133 ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 475 e-131 ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor... 471 e-130 ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 469 e-129 ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor... 466 e-128 ref|XP_003626283.1| RNA pseudourine synthase [Medicago truncatul... 461 e-127 >ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda] gi|548862161|gb|ERN19525.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda] Length = 477 Score = 493 bits (1269), Expect = e-137 Identities = 239/398 (60%), Positives = 290/398 (72%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP Y+ LLPCPS+ PPRIEHLIV + G V+D I +ALD+P L+V DLI FGAV+YALV Sbjct: 80 YPGYTSLLPCPSKNGPPRIEHLIVSEGGPVLDYICKALDLPTLFVADLIHFGAVYYALVS 139 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P +AT EQV+L+K+ T+ SVL+ R S+KGKTVREAQKTFRI+ A E VEEG+Y+R++ Sbjct: 140 PEPPPSATPEQVKLFKEATARSVLRKRASLKGKTVREAQKTFRITHANEFVEEGTYLRVY 199 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SRVIAETESYVVLDKP T+VGGT NI E CA F +RA+GL P Sbjct: 200 VHPKRFPRCYEIDWRSRVIAETESYVVLDKPAATTVGGTPCNIEECCATFVSRALGLDFP 259 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 LRTTHQ+DNCTEGCVV SKT EFCS FH K RE+QVKKLYLAL TA +P G + HYM Sbjct: 260 LRTTHQIDNCTEGCVVFSKTKEFCSIFHGKIREKQVKKLYLALATAPVPVGVISHYMRPV 319 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 + GW PWP + ++A +E CGWPS++ AYECK++LL Sbjct: 320 NRAPRIISKDHIGGWHLCQLEVLECKEVPWPRAAVEAQNGVEDCGWPSKDFAYECKINLL 379 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQIRAQ A GAP+VGDT+Y+PA+I + FPNI PF + + E + DES A++E Sbjct: 380 TGRTHQIRAQLAACGAPIVGDTMYLPASIKEIAFPNINPFCEAN-SESMCDESKGEAVEE 438 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRT 1547 WI QHG +P AIGLQAC+ISWD G Y A PWWR+ Sbjct: 439 WIAQHGKEPNAAIGLQACEISWDGGACFYTARAPWWRS 476 >ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina] gi|557551677|gb|ESR62306.1| hypothetical protein CICLE_v10015055mg [Citrus clementina] Length = 487 Score = 492 bits (1266), Expect = e-136 Identities = 233/397 (58%), Positives = 291/397 (73%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS+ PPR+EHL+V + G V++ I L++P L+V DLI FGAV+YALVC Sbjct: 83 YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ ++K+VT PSVL R SIKGKTVREAQKTFRI+ ++VE G+Y+R+H Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y +DW SR+IA TES+VVLDKP GTSVGGTTDNI E+CA F +RA+GL P Sbjct: 203 VHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTP 262 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 LRTTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLYLALT A +P G + HYM Sbjct: 263 LRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHYMRPI 322 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F KGW PWP +T+ + IE CGWPSR+ AYECK+ LL Sbjct: 323 NIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYAYECKIKLL 382 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQ+RAQ A GAP+VGD++YMPAAI+++ P + PF + E +D+ + A+ E Sbjct: 383 TGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQK-EYASDDDKEMAVIE 441 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 WI QHG +P +AIGLQAC ISWD+G Y+A PWWR Sbjct: 442 WISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478 >ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X2 [Citrus sinensis] Length = 487 Score = 491 bits (1265), Expect = e-136 Identities = 233/397 (58%), Positives = 292/397 (73%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS+ PPR+EHL+V + G V++ I L++P L+V DLI FGAV+YALVC Sbjct: 83 YPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVC 142 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ ++K+VT PSVL R SIKGKTVREAQKTFRI+ ++VE G+Y+R+H Sbjct: 143 PKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVH 202 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y +DW+SR+IA TES+VVLDKP GTSVGGTTDNI E+CA F +RA+GL P Sbjct: 203 VHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLTTP 262 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 LRTTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLYLALTTA +P G + HYM Sbjct: 263 LRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGIMTHYMRPI 322 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F GW PWP +T+ + IE CGWPSR+ AYECK+ LL Sbjct: 323 NIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYAYECKIKLL 382 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQ+RAQ A GAP+VGD++YMPAAI+++ P + PF + E +D+ + A+ E Sbjct: 383 TGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQK-EYASDDDKEMAVIE 441 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 WI QHG +P +AIGLQAC ISWD+G Y+A PWWR Sbjct: 442 WISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478 >ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa] gi|550340110|gb|EEE85437.2| pseudouridine synthase family protein [Populus trichocarpa] Length = 470 Score = 491 bits (1265), Expect = e-136 Identities = 234/400 (58%), Positives = 293/400 (73%), Gaps = 3/400 (0%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y+RLLPCPS PPRIEHL+V + G V+D I +ALD+P L+V DLI FGAVHYALVC Sbjct: 71 YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ ++++VT+PSVLK R SIKGKTVREAQKTFRI+ + +E G Y+R+H Sbjct: 131 PQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLRVH 190 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y +DW SR+I TES+VVLDKP GTSVGGTTDNI E+CA F TRA+GL P Sbjct: 191 VHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAP 250 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 LRTTHQ+DNCTEGCVVL++T E CS FH K RE+ VKKLY+AL + +P G + HYM Sbjct: 251 LRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPI 310 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 EF KGW PWP + ++ ++ CGWPS++ AYECK++LL Sbjct: 311 NMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECKINLL 370 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF---KQDSVIEDINDESVKAA 1424 TGRTHQIRAQ A +GAP+VGD++YMPAA++ M P PF K+ ED D+++ A Sbjct: 371 TGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSED--DKAI--A 426 Query: 1425 IDEWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 ++EW+L HG +P +AIGLQACQISWD+G+ +Y A PWWR Sbjct: 427 VEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466 >ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X2 [Solanum tuberosum] Length = 483 Score = 490 bits (1261), Expect = e-136 Identities = 232/396 (58%), Positives = 292/396 (73%), Gaps = 1/396 (0%) Frame = +3 Query: 360 KYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVCPI 539 +Y RL+PCP + PPR+EHL+V K G V++ I +ALD+P LYV+DLI FGAV+YALVCP Sbjct: 90 RYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYYALVCPK 149 Query: 540 LPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIHVH 719 P TA+ EQ+++Y++VT PS+L+ R SIKGKTVREAQKTF+I+ A E+VE G+Y+R+HVH Sbjct: 150 PPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVH 209 Query: 720 PKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIPLR 899 PKRFPR Y +DW SR+IA T+ YVVLDKP GTSVGGTTDNI E+CA F TRA+G PL Sbjct: 210 PKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLL 269 Query: 900 TTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXXXX 1079 TTHQ+DNCTEGCVVL+++ E+CS FH K RE++VKKLYLAL A +P G L HYM Sbjct: 270 TTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMRPINM 329 Query: 1080 XXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLLTG 1259 +F KGW PWPSS +Q + +E CGW ++ AYEC+++LLTG Sbjct: 330 APRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWALKDFAYECQINLLTG 389 Query: 1260 RTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAIDEW 1436 RTHQIRAQ A APVVGD++YMPAAI+ + P PF K + + ND+S+ AIDEW Sbjct: 390 RTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSL--AIDEW 447 Query: 1437 ILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 I QHG +P +A+GLQACQISWD+G+ Y A LPWWR Sbjct: 448 IAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483 >ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera] gi|302144082|emb|CBI23187.3| unnamed protein product [Vitis vinifera] Length = 472 Score = 489 bits (1260), Expect = e-135 Identities = 237/397 (59%), Positives = 290/397 (73%), Gaps = 1/397 (0%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS+ PPR+EHL+V + G V+D IS+ALD+P L+V DLI FGAV+YALVC Sbjct: 77 YPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVC 136 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P +AT EQV L+K+VT+PSVL+ R SIKGKT+REAQKTFRI+D E VE G+Y+R+H Sbjct: 137 PEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVH 196 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SR+IA TESYVVLDKP GTSVGGTTDNI E+CA F TRA+GL P Sbjct: 197 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTP 256 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 LRTTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLY AL A +P G + HYM Sbjct: 257 LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPV 316 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F KGW PWPS+ ++ IE GWP + A++CK++LL Sbjct: 317 NIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLL 376 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAID 1430 TGRTHQIRAQ A GAP+VGD++YMPAAI+ + P + PF K ND + A+ Sbjct: 377 TGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDR--ETAVA 434 Query: 1431 EWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWW 1541 EWI QHG +P +AIGLQACQISWD+G YKA PWW Sbjct: 435 EWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471 >ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Glycine max] Length = 478 Score = 489 bits (1259), Expect = e-135 Identities = 229/398 (57%), Positives = 291/398 (73%), Gaps = 1/398 (0%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 +PKY RLLPCPS PPRIEHL++ + G V++ I +ALD+P LYV DLI FGAV+YALVC Sbjct: 82 FPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSDLIQFGAVYYALVC 141 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P AT EQ+ ++K+VT PSVL+ R SIKGKTVREAQKTFR++ + VE G+Y+R+H Sbjct: 142 PQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVH 201 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPRSY++DW SR+IA ESYVVLDKP GTSVGGTTDNI E+CA F TRA+G+ P Sbjct: 202 VHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTP 261 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCVVL++T ++CS FH K RE++VKKLYLAL + +P G + HYM Sbjct: 262 LMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPI 321 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F KGW PWP++ +Q +E CGWPS++ AYECK++LL Sbjct: 322 NMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECKINLL 381 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVK-AAID 1430 TG+THQIRAQFA AP++GD++YMPAAI+ + P + PF + +D + ES K A+ Sbjct: 382 TGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYK--KDFSSESEKETAVV 439 Query: 1431 EWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 W+ QHG +P +AIGLQACQISWD+ Y+A LPWWR Sbjct: 440 NWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477 >ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum lycopersicum] Length = 448 Score = 489 bits (1259), Expect = e-135 Identities = 232/396 (58%), Positives = 292/396 (73%), Gaps = 1/396 (0%) Frame = +3 Query: 360 KYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVCPI 539 +Y RL+PCP + PPR+EHL+V K G VV+ I +ALD+P LYV+DLI FGAV+YALVCP Sbjct: 55 RYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPK 114 Query: 540 LPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIHVH 719 P TA+ EQ+++Y++VT PSVL+ R SIKGKTVREAQKTF+I+ A E+VE G+Y+R+HVH Sbjct: 115 PPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVH 174 Query: 720 PKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIPLR 899 PKRFPR Y +DW SR+IA T+ YVVLDKP GTSVGGTTDNI E+CA F TRA+G PL Sbjct: 175 PKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLL 234 Query: 900 TTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXXXX 1079 TTHQ+DNCTEGCVVL+++ E+CS FH K RE++V+KLYLAL A +P G L HYM Sbjct: 235 TTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHYMRPINM 294 Query: 1080 XXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLLTG 1259 +F KGW PWPSS +Q + +E CGW ++ AYEC+++LLTG Sbjct: 295 APRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWALKDYAYECQINLLTG 354 Query: 1260 RTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAIDEW 1436 RTHQIRAQ A APVVGD++YMPAAI+ + P PF K + + ND+S+ AIDEW Sbjct: 355 RTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSL--AIDEW 412 Query: 1437 ILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 I QHG +P +A+GLQACQISWD+G+ Y A +PWWR Sbjct: 413 IAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448 >gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica] Length = 477 Score = 488 bits (1255), Expect = e-135 Identities = 226/399 (56%), Positives = 291/399 (72%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y+RLLPCPS PPR+EHL+V + G V++ I + LD+P +V DLI FGAV+YALVC Sbjct: 80 YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVYYALVC 139 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ ++K+VT+PSVLK+R SIKGKTVREAQKTFRI+ A E VE G+Y+R+H Sbjct: 140 PKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTYLRVH 199 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y +DW SR+IA +E +VVLDKP GT+VGGTTDNI E+CA F TRA+GL P Sbjct: 200 VHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRALGLTTP 259 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLYLAL A +P G + HYM Sbjct: 260 LNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHYMRPI 319 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F + W PWP++ ++ +E CGWPS++ AYECK++LL Sbjct: 320 NVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKDYAYECKINLL 379 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQ+RAQ A GAP+VGD++YMPAA++ ME P + PF Q + + A+ E Sbjct: 380 TGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKK-HYTTENDKETAVAE 438 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRTE 1550 WI +HG +P +AIGLQACQISWD+G+ ++A PWWR + Sbjct: 439 WIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWRCQ 477 >ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis] gi|223542360|gb|EEF43902.1| ribosomal pseudouridine synthase, putative [Ricinus communis] Length = 476 Score = 486 bits (1250), Expect = e-134 Identities = 230/395 (58%), Positives = 288/395 (72%), Gaps = 1/395 (0%) Frame = +3 Query: 363 YSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVCPIL 542 Y RLLPCPS PPRIEHL+V + G V+D I +ALD+P L+V DLI FGAVHYALVCP Sbjct: 80 YDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYALVCPRP 139 Query: 543 PSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIHVHP 722 P+TAT EQ+ L++K T+PSVLK R SIKGKTVREAQKTFRI+ + +E G+Y+R+HVHP Sbjct: 140 PTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHP 199 Query: 723 KRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIPLRT 902 KRFPR Y +DW SR+IA T+ YVVLDKP GTSVGGT DNI E+CA F TRA+GL PL+T Sbjct: 200 KRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLTTPLKT 259 Query: 903 THQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXXXXX 1082 THQ+DNCTEGCVVL+++ E+CS FH K RE++VKKLYLAL + +P G + +YM Sbjct: 260 THQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMRPVNIA 319 Query: 1083 XXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLLTGR 1262 EF GW PWP + ++ +E CGWPS++ AYECK++LLTGR Sbjct: 320 PRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECKINLLTGR 379 Query: 1263 THQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAIDEWI 1439 THQIRAQ A GAP+VGD++YMPAA++ M P + PF K + +DES+ A+ EW+ Sbjct: 380 THQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESM--AVAEWV 437 Query: 1440 LQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 QHG +P +AIGLQAC+ISWD G+ +YKA PWWR Sbjct: 438 AQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472 >ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis] gi|223542359|gb|EEF43901.1| ribosomal pseudouridine synthase, putative [Ricinus communis] Length = 395 Score = 484 bits (1246), Expect = e-134 Identities = 230/395 (58%), Positives = 286/395 (72%), Gaps = 1/395 (0%) Frame = +3 Query: 363 YSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVCPIL 542 Y RLLPCPS+ PPR+EHL+V + G V+D I +ALD+P L+V DLI FGAVHYALVCP Sbjct: 3 YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62 Query: 543 PSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIHVHP 722 P TAT EQ+ L+++ T+PSVLK R SIKGKTVREAQKTFR+S + +E G+Y+R++VHP Sbjct: 63 PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122 Query: 723 KRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIPLRT 902 +RFPR Y++DW SR+IA TESYVVLDKP GTSVGGTT+NI ETCA F TRA+GL IPL+T Sbjct: 123 RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182 Query: 903 THQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXXXXX 1082 THQ+DNCTEGCVVL++T E+C FH K RE +VKKLYLAL +P G + HYM Sbjct: 183 THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242 Query: 1083 XXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLLTGR 1262 EF +GW PWP + + +E CGWPS++ AYECK++LLTGR Sbjct: 243 PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302 Query: 1263 THQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAIDEWI 1439 THQIRAQ A GAP+VGD++YMPAAI+ M P + PF K NDES+ A EW+ Sbjct: 303 THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVA--EWV 360 Query: 1440 LQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 +HG +P +AIGLQAC+ISW + + +YKA PWWR Sbjct: 361 ERHGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395 >gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris] Length = 478 Score = 481 bits (1239), Expect = e-133 Identities = 229/397 (57%), Positives = 287/397 (72%), Gaps = 1/397 (0%) Frame = +3 Query: 357 PKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVCP 536 PKY RLLPCP PPR+EHL+V + G V++ I +AL++P LYV DLI FGAV+YALVCP Sbjct: 83 PKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVTDLIQFGAVYYALVCP 142 Query: 537 ILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIHV 716 P +AT EQ+ ++K+VT PSVL+ R SIKGKTVREAQKTFR++ A + VE G+Y+R+HV Sbjct: 143 QPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTYLRVHV 202 Query: 717 HPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIPL 896 HPKRFPR Y++DW SR+I+ ESYVVLDKP GTSVGGTTDNI E+CA F TRA+GL PL Sbjct: 203 HPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAPL 262 Query: 897 RTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXXX 1076 TTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLYLAL ++ +P G + HYM Sbjct: 263 MTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSPLPTGIITHYMRPIN 322 Query: 1077 XXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLLT 1256 +F KGW PWP+ ++Q +E CGWP ++ AYECK++LLT Sbjct: 323 MAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWPYQDFAYECKINLLT 382 Query: 1257 GRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVK-AAIDE 1433 GRTHQIRAQFA AP+VGD++YMPAAI M P + PF + D + ES K A+ Sbjct: 383 GRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYK--RDFSSESEKETAVVN 440 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 WI QHG +P +AIGLQACQISWD+ Y++ PWWR Sbjct: 441 WIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477 >ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Glycine max] Length = 478 Score = 481 bits (1237), Expect = e-133 Identities = 228/398 (57%), Positives = 284/398 (71%), Gaps = 1/398 (0%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 + KY RLLPCPS PPRIEHL+V + G V++ I +ALD+P LYV DLI FGAV+YALVC Sbjct: 82 FRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAVYYALVC 141 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P AT EQ+ ++K+VT PSVL+ R SIKGKTVREAQKTFR++ + VE G+Y+R+H Sbjct: 142 PQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVH 201 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKR PR Y++DW SR+I ESYVVLDKP GTSVGGTTDNI E+CA F TRA+G+ P Sbjct: 202 VHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTP 261 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCVVL++T E+CS FH K RE++VKK YLAL +P G + HYM Sbjct: 262 LMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHYMRPI 321 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F KGW PWP++ +Q IE CGWPS++ AYECK++LL Sbjct: 322 DMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECKINLL 381 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVK-AAID 1430 TG+THQIRAQFA AP++GD++YMPAAI+ M P + PF + +D + ES K A+ Sbjct: 382 TGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYK--KDFSSESEKETAVV 439 Query: 1431 EWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 WI QHG +P +AIGLQACQISWD+ Y+A PWWR Sbjct: 440 NWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477 >ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 477 Score = 480 bits (1236), Expect = e-133 Identities = 230/398 (57%), Positives = 290/398 (72%), Gaps = 1/398 (0%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP Y+RLLPCPS+ PPR+EHL+V + G V++ I + LD+P +V DLI FGAV+YALVC Sbjct: 81 YP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFGAVYYALVC 139 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ +YK+VT+PSVLK R SIKGKTVREAQKTFRI+ A + VE+G+Y+R+H Sbjct: 140 PKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLRVH 199 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y +DW SRVIA TE +VVLDKP GT+VGGTTDNI E+CA FT+RA+GL P Sbjct: 200 VHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRALGLSTP 259 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCVVL++T ++CS FH K RE++VKKLYLAL A +P G + HYM Sbjct: 260 LMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITHYMRPI 319 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 + + W PWPSS ++ +E CGWPS++ AYECK++LL Sbjct: 320 NVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPSKDYAYECKINLL 379 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPF-KQDSVIEDINDESVKAAID 1430 TG+THQIRAQ A G P+VGD++YMPAAI+ ME P + PF K NDE + A+ Sbjct: 380 TGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYAGENDEEI--AVT 437 Query: 1431 EWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWR 1544 EW+ +HG +P +AIGLQACQISWD+G ++A PWWR Sbjct: 438 EWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475 >gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao] Length = 491 Score = 480 bits (1235), Expect = e-133 Identities = 226/398 (56%), Positives = 286/398 (71%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS PPR+EHL+V + G V++ I +ALD+P ++V DLI FGAV+YALVC Sbjct: 93 YPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALVC 152 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P +AT EQ+ ++K+VT+PSVL R SI+GKTVREAQKTFRI+ + VE G+Y+R+H Sbjct: 153 PQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVH 212 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SR+IA T+SYVVLDKP GTSVGGTTDNI E+CA F RA+G P Sbjct: 213 VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFSTP 272 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L+TTHQ+DNCTEGCVVL++T E+CS FH K RE++VKKLYLALT A +P G + HYM Sbjct: 273 LKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPI 332 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 +F KGW PWP +Q + IE GWP ++ AYECK++LL Sbjct: 333 NMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWPLKDHAYECKINLL 392 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQ+RAQ A GAP++GD++YMP I+ + P + PF + ND+ + AI E Sbjct: 393 TGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKKHTSENDKEI--AITE 450 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRT 1547 WI Q G +P +AIGLQACQISWD+G YKA PWWR+ Sbjct: 451 WISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWRS 488 >ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6, chloroplastic-like [Cicer arietinum] Length = 467 Score = 475 bits (1222), Expect = e-131 Identities = 230/428 (53%), Positives = 294/428 (68%), Gaps = 13/428 (3%) Frame = +3 Query: 300 CRSAHXXXXXXXXXXXXXYPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPR 479 CRS+H YPKY+RLLPCP+ +PPRIEH++V + G V++ I +ALD+P Sbjct: 44 CRSSHNSSAVAFSLS---YPKYNRLLPCPTHKIPPRIEHIVVSEGGPVLEYICKALDLPP 100 Query: 480 LYVKDLILFGAVHYALVCPILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTF 659 L+V DLI FGAV++ALVCP P TATAE++ ++KK T P VL+ R SIKGKT+REAQKTF Sbjct: 101 LFVADLIKFGAVYFALVCPKPPPTATAEEIRVFKKATEPLVLRKRASIKGKTIREAQKTF 160 Query: 660 RISDATEVVEEGSYMRIHVHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDN 839 ++D + VE G+Y+R+HVHPKRFPR Y++DW SR+IA ESYV+LDKP GTSVGGTT N Sbjct: 161 LVTDVDQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVILDKPAGTSVGGTTGN 220 Query: 840 IYETCANFTTRAIGLKIPLRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLA 1019 E+CANF TRA+ L PL TTHQ+DNCTEGCVVL++ E+CS FH K RE++VKK+YLA Sbjct: 221 TEESCANFATRALELTTPLMTTHQIDNCTEGCVVLARNKEYCSVFHGKIREKKVKKIYLA 280 Query: 1020 LTTAYIPPGKLIHYM------------XXXXXXXXXXXXEFTKGWQXXXXXXXXXXXXPW 1163 L + +P G + HYM F KGW PW Sbjct: 281 LAASPLPTGIIKHYMRPINMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVLECIKIPW 340 Query: 1164 PSSTLQASAFIEGCGWPSREVAYECKVDLLTGRTHQIRAQFADIGAPVVGDTIYMPAAIS 1343 P++ +Q +E CGWPS++ AYECK++LLTGRTHQIRAQFA AP++GD++YMPAAI+ Sbjct: 341 PTTVVQEKYCVEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSMYMPAAIA 400 Query: 1344 RMEFPNIYPFKQDSVIEDINDESVK-AAIDEWILQHGNDPPLAIGLQACQISWDNGRKVY 1520 M P + PF + +D ES K A+ WI QHG +P +AIGLQACQISWD+G +Y Sbjct: 401 EMMNPGLNPFGKYK--KDFTSESEKETAVINWIAQHGKEPSVAIGLQACQISWDDGEHIY 458 Query: 1521 KAHLPWWR 1544 +A PWWR Sbjct: 459 EAGSPWWR 466 >ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis sativus] Length = 475 Score = 471 bits (1213), Expect = e-130 Identities = 225/399 (56%), Positives = 283/399 (70%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS + PPR+EH++V + G V++ I ++L++P LYV DLI FGAV+YALVC Sbjct: 76 YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ L+KK T PS LK R SIKGKTVREAQKTFRI+ E VE G+Y+R+H Sbjct: 136 PQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SR+IA TESYVVLDKP GTSVGGTTDNI E+CA F TRA+GL P Sbjct: 196 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSP 255 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCV+ ++T E+CS FH K RE++V KLYLAL+ A +P G + HYM Sbjct: 256 LWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPI 315 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 + GW WP + ++A +E CGWPS++ AYEC+++LL Sbjct: 316 NIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWPSKKKAYECRINLL 375 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQIRAQ AD GAP+VGD++YMPA ++ M P + PF + E N+E + A+ E Sbjct: 376 TGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK-EYTNEEDKETAVAE 434 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRTE 1550 W HG +P +AIGLQA +ISWD+ Y A PWWR E Sbjct: 435 WSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWRQE 473 >ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6, chloroplastic-like [Cucumis sativus] Length = 475 Score = 469 bits (1207), Expect = e-129 Identities = 223/399 (55%), Positives = 282/399 (70%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPCPS + PPR+EH++V + G V++ I ++L++P LYV DLI FGAV+YALVC Sbjct: 76 YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TAT EQ+ L+K T PS LK R SIKGKTVREAQKTFRI+ E VE G+Y+R+H Sbjct: 136 PQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SR+IA TESYVVLDKP GTSVGGTTDNI E+CA F TRA+GL P Sbjct: 196 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSP 255 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCV+ ++T E+CS FH K RE++V KLYLAL+ A +P G + HYM Sbjct: 256 LWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPI 315 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 + GW WP + +A +E CGWPS++ AYEC+++LL Sbjct: 316 NIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECRINLL 375 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQIRAQ AD GAP+VGD++YMPA ++ M P + PF + E N+E + ++ E Sbjct: 376 TGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK-EYTNEEDKETSVAE 434 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRTE 1550 W HG +P +AIGLQA +ISWD+ +Y A PWWR E Sbjct: 435 WSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQE 473 >ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis sativus] Length = 475 Score = 466 bits (1199), Expect = e-128 Identities = 223/399 (55%), Positives = 284/399 (71%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YP+Y RLLPC S +PPR+EHL+V + G V++ IS++LD+P +YV DLI FGAV+YALVC Sbjct: 76 YPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVC 135 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TA++E++ L+KK T PS L R SIKGKT+REAQKTFRI+ E VE G+Y+R++ Sbjct: 136 PQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY 195 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y+VDW SR+IA T+SYVVLDKP GTSVGGTT+NI ETC F TRA+GL P Sbjct: 196 VHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSP 255 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCV+L++T E+CS FH K RE++V KLYLAL +P G + HYM Sbjct: 256 LWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMRPN 315 Query: 1074 XXXXXXXXXEFTKGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPSREVAYECKVDLL 1253 + GW WP + ++A IE CGWPS++ A+ECK++LL Sbjct: 316 NLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKINLL 375 Query: 1254 TGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIEDINDESVKAAIDE 1433 TGRTHQIR Q AD GAP+VGD+IYMPAA++ M P + PF + E ++E + A+ E Sbjct: 376 TGRTHQIRVQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK-EYTSEEDKENAVAE 434 Query: 1434 WILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWWRTE 1550 WI HG +P +AIGLQA +ISWD+G +Y A PWWR E Sbjct: 435 WIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWRQE 473 >ref|XP_003626283.1| RNA pseudourine synthase [Medicago truncatula] gi|355501298|gb|AES82501.1| RNA pseudourine synthase [Medicago truncatula] Length = 462 Score = 461 bits (1186), Expect = e-127 Identities = 226/409 (55%), Positives = 286/409 (69%), Gaps = 13/409 (3%) Frame = +3 Query: 354 YPKYSRLLPCPSEALPPRIEHLIVQKTGNVVDTISEALDIPRLYVKDLILFGAVHYALVC 533 YPKY RLLPCPS +PPRIEHL+V + G V+ I +ALD+P L+V DLI FGAV++ALV Sbjct: 57 YPKYDRLLPCPSHKIPPRIEHLVVSQEGPVLQYICKALDLPHLFVADLIQFGAVYFALVS 116 Query: 534 PILPSTATAEQVELYKKVTSPSVLKDRISIKGKTVREAQKTFRISDATEVVEEGSYMRIH 713 P P TATAEQ+ ++++VT P VL+ R S+KGKT+REAQKTFR++DA + VE G+Y+R+H Sbjct: 117 PEPPPTATAEQIRIFEQVTEPLVLQKRSSLKGKTIREAQKTFRVTDANQFVEPGTYLRVH 176 Query: 714 VHPKRFPRSYQVDWHSRVIAETESYVVLDKPVGTSVGGTTDNIYETCANFTTRAIGLKIP 893 VHPKRFPR Y++DW SR+IA ESYVVLDKP GTSVG TT NI E+C F TRA+GL P Sbjct: 177 VHPKRFPRCYEIDWRSRIIAVEESYVVLDKPAGTSVGETTGNIEESCVTFATRALGLTTP 236 Query: 894 LRTTHQLDNCTEGCVVLSKTLEFCSEFHSKFRERQVKKLYLALTTAYIPPGKLIHYMXXX 1073 L TTHQ+DNCTEGCVVL++ E+CS FH K RE++VKK+YLAL + +P G + HYM Sbjct: 237 LITTHQIDNCTEGCVVLARNKEYCSVFHCKIREKKVKKIYLALAASPLPIGIIKHYMRPT 296 Query: 1074 XXXXXXXXXEFT------------KGWQXXXXXXXXXXXXPWPSSTLQASAFIEGCGWPS 1217 + KGW PWP+ +Q E CGWPS Sbjct: 297 NTAPRLISEGNSTQIGMLCKDYCIKGWHICQLEVMDCRKIPWPAIVVQD----EYCGWPS 352 Query: 1218 REVAYECKVDLLTGRTHQIRAQFADIGAPVVGDTIYMPAAISRMEFPNIYPFKQDSVIED 1397 ++ AYECK++LLTGRTHQIRAQFA AP++GDT+YMPAAI+ M P + PF + + +D Sbjct: 353 QDYAYECKINLLTGRTHQIRAQFAACKAPIIGDTMYMPAAIAEMINPGLNPFGKYN--KD 410 Query: 1398 INDES-VKAAIDEWILQHGNDPPLAIGLQACQISWDNGRKVYKAHLPWW 1541 + ES K A+ WI QHG +P +AIGLQACQISWD+ +Y+A LPWW Sbjct: 411 FSSESEKKTAVINWIAQHGKEPSVAIGLQACQISWDDDEYIYRAGLPWW 459