BLASTX nr result

ID: Ephedra28_contig00006952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006952
         (565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828549.1| hypothetical protein AMTR_s00060p00214220 [A...    66   7e-09
ref|XP_006827143.1| hypothetical protein AMTR_s00010p00250780 [A...    60   5e-07
gb|ACF22004.1| NBS-coding resistance gene protein [Nicotiana tab...    58   2e-06
gb|ACF21999.1| NBS-coding resistance gene protein [Nicotiana tab...    58   2e-06
gb|ACF21992.1| NBS-coding resistance gene protein [Nicotiana tab...    58   2e-06
gb|ACF21991.1| NBS-coding resistance gene protein [Nicotiana tab...    58   2e-06
ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vi...    56   5e-06
gb|ACF22003.1| NBS-coding resistance gene protein [Nicotiana tab...    55   9e-06

>ref|XP_006828549.1| hypothetical protein AMTR_s00060p00214220 [Amborella trichopoda]
           gi|548833297|gb|ERM95965.1| hypothetical protein
           AMTR_s00060p00214220 [Amborella trichopoda]
          Length = 1366

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 44/174 (25%), Positives = 84/174 (48%)
 Frame = +3

Query: 12  TKKVKHILDEKKQGRGLTCVEXXXXXXXXXXXFAYALYNTIRMHFKRCCFIEDVKDKMEK 191
           T+K++ +L+  ++GRG   +             A   +N +R  FK  CF++D+KD++ +
Sbjct: 206 TEKLQRLLEVGREGRGARVLGLVGMGGIGKTTLAKEFFNIMRSQFKASCFVDDIKDRVVR 265

Query: 192 DGPLQIHKTLLKDLFYRDTQSTNIAQAKAQLKKYIENEXXXXXXXXXXXKSRVSDILVQD 371
            G  ++   LLKDL   D Q  +I Q K  L+K +                ++  + V +
Sbjct: 266 AGLEKVQGFLLKDLLQIDNQIHSINQGKFLLRKCLVRAEVIIVLDNIDDFDQLDALQVPE 325

Query: 372 GAFLAPTSVIIVTSRDTHILNNDMAFCKSRAVIRVEIPRLPLNESKEVFCEYAF 533
              +  TS++++T+RD  ++      C    +I  ++  L  + +KE+FC +AF
Sbjct: 326 --VVHCTSIVLITTRDRRLVE-----CIPNVLI-YDMDGLEKHYAKELFCWHAF 371


>ref|XP_006827143.1| hypothetical protein AMTR_s00010p00250780 [Amborella trichopoda]
           gi|548831572|gb|ERM94380.1| hypothetical protein
           AMTR_s00010p00250780 [Amborella trichopoda]
          Length = 1140

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 42/174 (24%), Positives = 83/174 (47%)
 Frame = +3

Query: 12  TKKVKHILDEKKQGRGLTCVEXXXXXXXXXXXFAYALYNTIRMHFKRCCFIEDVKDKMEK 191
           T+K++ +L+  ++G G   +             A   ++ +R  FK   F++D+KD++ +
Sbjct: 206 TEKLQRLLEVGREGTGARVLGLVGMGGIGKTTLAKEFFSIMRSQFKAFSFVDDIKDRVVR 265

Query: 192 DGPLQIHKTLLKDLFYRDTQSTNIAQAKAQLKKYIENEXXXXXXXXXXXKSRVSDILVQD 371
            G  ++   LLKDL   D Q  +I Q K  L+K +                ++  + V +
Sbjct: 266 AGLEKVQGFLLKDLLQIDHQIHSINQGKFLLRKCLSRAEVIIVLDNIDDFDQLDALRVPE 325

Query: 372 GAFLAPTSVIIVTSRDTHILNNDMAFCKSRAVIRVEIPRLPLNESKEVFCEYAF 533
              +  TS++++T+RD  ++      C   A+I  ++  L  + +KE+FC +AF
Sbjct: 326 --VVHCTSIVLITTRDRRLVE-----CIPNALI-YDMDGLEKHHAKELFCWHAF 371


>gb|ACF22004.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKD-LFYRDTQSTNIAQAKAQLK 287
           A A+YN +  HF   CF+ DV+ + E+ G +++ + LL+  L  +D +  ++AQ    +K
Sbjct: 73  AKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLKNKDIKVGSVAQGINLIK 132

Query: 288 KYIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAV 467
             +E++           K+++ + L ++ ++    S+II+T+RD  +L      C+    
Sbjct: 133 TRLESKKVLIALDDVDHKNQL-ESLTRERSWFGSGSLIIITTRDKRLL------CRLGEK 185

Query: 468 IRVEIPRLPLNESKEVFCEYAF 533
            R E   L +NE+  +FC +AF
Sbjct: 186 ERYEAELLNVNEAMLLFCWHAF 207


>gb|ACF21999.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 280

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKD-LFYRDTQSTNIAQAKAQLK 287
           A A+YN +  HF   CF+ DV+ + E+ G +++ + LL+  L  +D +  ++AQ    +K
Sbjct: 63  AKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLKNKDIKVGSVAQGINLIK 122

Query: 288 KYIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAV 467
             +E++           K+++ + L ++ ++    S+II+T+RD  +L      C+    
Sbjct: 123 TRLESKKVLIVLDDVDHKNQL-ESLTRERSWFGSGSLIIITTRDKRLL------CRLGEK 175

Query: 468 IRVEIPRLPLNESKEVFCEYAF 533
            R E   L +NE+  +FC +AF
Sbjct: 176 ERYEAELLNVNEAMLLFCWHAF 197


>gb|ACF21992.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 258

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKD-LFYRDTQSTNIAQAKAQLK 287
           A A+YN +  HF   CF+ DV+ + E+ G +++ + LL+  L  +D +  ++AQ    +K
Sbjct: 41  AKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLKNKDIKVGSVAQGINLIK 100

Query: 288 KYIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAV 467
             +E++           K+++ + L ++ ++    S+II+T+RD  +L      C+    
Sbjct: 101 TRLESKKVLIVLDDVDHKNQL-ESLTRERSWFGSGSLIIITTRDKRLL------CRLGEK 153

Query: 468 IRVEIPRLPLNESKEVFCEYAF 533
            R E   L +NE+  +FC +AF
Sbjct: 154 ERYEAELLNVNEAMLLFCWHAF 175


>gb|ACF21991.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 294

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKD-LFYRDTQSTNIAQAKAQLK 287
           A A+YN +  HF   CF+ DV+ + E+ G +++ + LL+  L  +D +  ++AQ    +K
Sbjct: 77  AKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLKNKDIKVGSVAQGINLIK 136

Query: 288 KYIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAV 467
             +E++           K+++ + L ++ ++    S+II+T+RD  +L      C+    
Sbjct: 137 TRLESKKVLIVLDDADHKNQL-ESLTRERSWFGSGSLIIITTRDKRLL------CRLGEK 189

Query: 468 IRVEIPRLPLNESKEVFCEYAF 533
            R E   L +NE+  +FC +AF
Sbjct: 190 ERYEAELLNVNEAMLLFCWHAF 211


>ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/141 (24%), Positives = 65/141 (46%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKDLFYRDTQSTNIAQAKAQLKK 290
           A A+Y  I   F+ CCF+ +V++K +K+ P  I   LL  +F+    +T I        K
Sbjct: 233 AEAVYQKICTQFEGCCFLSNVREKSQKNDPAVIQMELLSQVFWEGNLNTRIFNRGINAIK 292

Query: 291 YIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAVI 470
              +            + +  ++L  +  +  P S II+T+R+ H+L+  +         
Sbjct: 293 KTLHSMRVLIVLDDVDRPQQLEVLAGNHNWFGPGSRIIITTREKHLLDEKVEI------- 345

Query: 471 RVEIPRLPLNESKEVFCEYAF 533
             E+  L  +E++ +F ++AF
Sbjct: 346 -YEVKELNKDEARRLFYQHAF 365


>gb|ACF22003.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 271

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
 Frame = +3

Query: 111 AYALYNTIRMHFKRCCFIEDVKDKMEKDGPLQIHKTLLKD-LFYRDTQSTNIAQAKAQLK 287
           A A+YN +  HF   CF+ DV+ + E+ G +++ + LL+  L  +D +  ++AQ    +K
Sbjct: 54  AKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLKNKDIKVGSVAQGINLIK 113

Query: 288 KYIENEXXXXXXXXXXXKSRVSDILVQDGAFLAPTSVIIVTSRDTHILNNDMAFCKSRAV 467
             +E++           K+++ + L ++ ++    S+II+ +RD  +L      C+    
Sbjct: 114 TRLESKKVLIVLDDVDHKNQL-ESLTRERSWFGSGSLIIIITRDKRLL------CRLGEK 166

Query: 468 IRVEIPRLPLNESKEVFCEYAF 533
            R E   L +NE+  +FC +AF
Sbjct: 167 ERYEAELLNVNEAMLLFCWHAF 188


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