BLASTX nr result
ID: Ephedra28_contig00006823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00006823
(2298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi... 460 e-126
ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Sela... 449 e-123
ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Sela... 447 e-123
ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [A... 340 2e-90
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 333 2e-88
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 333 2e-88
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 296 3e-77
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe... 294 1e-76
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 293 3e-76
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 292 4e-76
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 291 9e-76
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 291 1e-75
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 289 3e-75
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 289 4e-75
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 281 9e-73
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 278 6e-72
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 276 3e-71
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 270 3e-69
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 261 9e-67
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 259 4e-66
>ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi|162690816|gb|EDQ77181.1|
predicted protein [Physcomitrella patens]
Length = 832
Score = 460 bits (1183), Expect = e-126
Identities = 275/675 (40%), Positives = 399/675 (59%), Gaps = 46/675 (6%)
Frame = +1
Query: 412 MDIDMDGNDVKVE-EEKPDIAMDVDEXXXXXXXXXXXXXXXE--DRVIREIDVCFRPHID 582
++ DM +K E +E+P +VD+ DRV+REIDV P +D
Sbjct: 140 LESDMSKQSIKEEVKEEPPSVKEVDDELKDEPMVVDSVVSKPGVDRVVREIDVFLTPRVD 199
Query: 583 PDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKI 762
P+T +Y++QYPLRP+WR Y LEERC EVR+KP+Q +FEVDL +D ENYD + +++L+I
Sbjct: 200 PETNLYVLQYPLRPYWRPYNLEERCLEVRIKPQQTKFEVDLDIDTTSENYDQDREQHLQI 259
Query: 763 SKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNM 942
KQTL S+K + +YAIGILRGN+L+L PVQ VQ RP M +I + K+S K +
Sbjct: 260 EKQTLASSKVAMTTSYAIGILRGNRLHLNPVQAVVQFRPSMKYIDEYDAAKKKSNKEAGI 319
Query: 943 GDDAEKE----KPVEAKPALVSV-----KPETERQEQLRLRSYQHFKKLEEEEPWIVLEP 1095
D E+E +P E+K L + + ETERQE RL+S+ + K+L+E E WI LEP
Sbjct: 320 ADGDEEELFDAEPPESKTELTLLQVNVRRRETERQEATRLQSHAYLKQLDEAEAWIPLEP 379
Query: 1096 YGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHGDHTGNAGLS 1275
+G D+ +T + +K+VT I FN++ Y++TLVPGR ST++ L D +GN G+S
Sbjct: 380 HGTDSPITEGIRQKMVTSTQDRINFNLSPDAYLNTLVPGRASTSTAGSLIEDGSGNVGIS 439
Query: 1276 RSYLDSLKLQD-RIKAIFSQKRIQVFRFESLMRFA-SGHSTEEVLNVVKTYAFLVQGCWV 1449
RS+L++L L + R + + R+QV +FE LM+ A +G S EE+LNV+ +A LVQGCWV
Sbjct: 440 RSHLETLVLPEVRFEYLLRVSRVQVLQFERLMKMAPAGCSDEELLNVLSNFAVLVQGCWV 499
Query: 1450 PASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIADQKPQEG 1623
AS YRG L +RDY+L LFSKN+ + +EQL L L K +RE++ IA Q+ G
Sbjct: 500 AASHIRPEYRGGLRAMRDYILFLFSKNRVVKHEQLRGLPLTKGALREIMVPIAVQRAGVG 559
Query: 1624 CWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQA---LHGIQAS------ 1776
W F+E+TDK+FI+ +Q + KEQ QW+ +E I A + + +HG + S
Sbjct: 560 -WEFQEDTDKSFIKKHQSVVKEQTAQWVNSEPGIVGALVEMNPSFPEVHGFEPSETFEGN 618
Query: 1777 ---NISSGES-------------LDQLKRSAVNGTGELNKKANMKEKLQLDG---STMSQ 1899
N SG+ +++ + GE + +K ++ TMS
Sbjct: 619 KKLNTKSGKQGNSSLVSHSPKPPSGKIQGNKAGPLGEAGPSGDGHDKSNVENGAQGTMSD 678
Query: 1900 ESRTSLALALREILSS-HVCNLKEIRQSLQNLAKVKGTA-GNKKEAVKGMAAAKGATAPL 2073
E+R +L AL+EI + HVC ++ I QSL+++A + A N K A +AAAK A AP
Sbjct: 679 ETRMALPGALKEIFAKHHVCTMQIIVQSLRDMAIERTVANSNPKSAAAAVAAAKAANAPA 738
Query: 2074 GELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLE 2253
ELT+ + +VA+NI GVYFL +L NP +D +R VV+ L+R GP A +RK ++ A K
Sbjct: 739 SELTAAVCRVATNIGGVYFLTTLNNPALDPFREVVIALLRKMGPDAGLRKNDILLAFKSA 798
Query: 2254 VGDPSPQIYSKIMKE 2298
+ Y K+MKE
Sbjct: 799 GREAPSATYLKVMKE 813
>ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Selaginella moellendorffii]
gi|300143736|gb|EFJ10425.1| hypothetical protein
SELMODRAFT_447395 [Selaginella moellendorffii]
Length = 625
Score = 449 bits (1154), Expect = e-123
Identities = 262/602 (43%), Positives = 373/602 (61%), Gaps = 14/602 (2%)
Frame = +1
Query: 535 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 714
D V+REI+V P DPDTK Y++QYPLRP+WR Y LE+RC+ VRVK + + EVDL +D
Sbjct: 25 DTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYELEQRCEAVRVKHQHQKLEVDLQVD 84
Query: 715 ENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHI 894
G+NYDD AD++L+I+KQTLTST+ L+ YAIGIL+GNKL+L P+ VQLRP ++++
Sbjct: 85 RFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGILQGNKLHLNPLHAIVQLRPSLSYL 144
Query: 895 AQGLDDIKRSRKAVNMGD---DAEKEKPVEAKPALVSV-----KPETERQEQLRLRSYQH 1050
+ + K++ V D DAE+ E KP V+ K ETERQ+Q RL SY H
Sbjct: 145 NEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPVAFKVEIKKQETERQQQSRLMSYAH 204
Query: 1051 FKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRT-STT 1227
K+LEE E WI LEP+G D+ VT E+ K+ + + I F+M+ + Y+ LVPGR S
Sbjct: 205 LKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANNLIRFDMSRNEYMKKLVPGRAPSAA 264
Query: 1228 SNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFA-SGHSTEEVL 1404
++ + G G LS+SYLD+L L R+ A+ SQ R+ V +FE LM+ A +G + EEVL
Sbjct: 265 ASQAVPG--LGKEPLSKSYLDTLPLDKRLHAVLSQGRVHVLQFERLMKLAPAGCTEEEVL 322
Query: 1405 NVVKTYAFLVQGCWVPASIFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 1584
+V++ A+LVQGCWV S Y G C +RDY+LL F KN+ + E LE+L + KE +RE
Sbjct: 323 DVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFVKNRVVSRETLEQLRVSKEILRE 382
Query: 1585 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 1764
+L +A Q + G W F E TDKTFI+ + I K+Q ++W E I A +++Q
Sbjct: 383 ILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQRWTAGEKLISDRALAVQQ---- 438
Query: 1765 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREI-L 1941
+ SG+++ S + + + + + S+M+ E+ +L AL +I L
Sbjct: 439 -----MGSGKAMGAKPGSGLAASTGIPPRPS-------TSSSMAPETLAALPDALTQIFL 486
Query: 1942 SSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAKGATAPLGELTSVIDQVASNI 2115
HVC L+ I L+ A K A N K E +AAAKGA+AP+ ELT+++D +A+NI
Sbjct: 487 KHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVDTIATNI 546
Query: 2116 NGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGD-PSPQIYSKIM 2292
NGVYFL LG+PT D +R VV+ L++ K G +++ E+ EA KL + PS Q+Y KIM
Sbjct: 547 NGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIMEAFKLALRKMPSNQLYQKIM 604
Query: 2293 KE 2298
KE
Sbjct: 605 KE 606
>ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Selaginella moellendorffii]
gi|300153087|gb|EFJ19727.1| hypothetical protein
SELMODRAFT_418944 [Selaginella moellendorffii]
Length = 625
Score = 447 bits (1151), Expect = e-123
Identities = 261/602 (43%), Positives = 373/602 (61%), Gaps = 14/602 (2%)
Frame = +1
Query: 535 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 714
D V+REI+V P DPDTK Y++QYPLRP+WR Y LE+RC+ VRVK + + EVDL +D
Sbjct: 25 DTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYELEQRCEAVRVKHQHQKLEVDLQVD 84
Query: 715 ENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHI 894
G+NYDD AD++L+I+KQTLTST+ L+ YAIGIL+GNKL+L P+ VQLRP ++++
Sbjct: 85 RFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGILQGNKLHLNPLHAIVQLRPSLSYL 144
Query: 895 AQGLDDIKRSRKAVNMGD---DAEKEKPVEAKPALVSV-----KPETERQEQLRLRSYQH 1050
+ + K++ V D DAE+ E KP V+ K ETERQ+Q RL SY H
Sbjct: 145 NEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPVAFKVEIKKQETERQQQSRLMSYAH 204
Query: 1051 FKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRT-STT 1227
K+LEE E WI LEP+G D+ VT E+ K+ + + I F+M+ + Y+ LVPGR S
Sbjct: 205 LKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANNLIRFDMSRNEYMKKLVPGRAPSAA 264
Query: 1228 SNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFA-SGHSTEEVL 1404
++ + G G LS+SYLD+L L R+ A+ SQ R+ V +FE LM+ A +G + EEVL
Sbjct: 265 ASQAVPG--LGKEPLSKSYLDTLPLDKRLHAVLSQGRVHVLQFERLMKLAPAGCTEEEVL 322
Query: 1405 NVVKTYAFLVQGCWVPASIFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 1584
+V++ A+LVQGCWV S Y G C +RDY+LL F KN+ + E LE+L + KE +RE
Sbjct: 323 DVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFVKNRVVSRETLEQLRVSKEILRE 382
Query: 1585 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 1764
+L +A Q + G W F E TDKTFI+ + I K+Q ++W + I A +++Q
Sbjct: 383 ILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQRWTAGDKLISDRALAVQQ---- 438
Query: 1765 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREI-L 1941
+ SG+++ S + + + + + S+M+ E+ +L AL +I L
Sbjct: 439 -----MGSGKAMGAKPGSGLAASTGIPPRPS-------TSSSMAPETLAALPDALTQIFL 486
Query: 1942 SSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAKGATAPLGELTSVIDQVASNI 2115
HVC L+ I L+ A K A N K E +AAAKGA+AP+ ELT+++D +A+NI
Sbjct: 487 KHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVDTIATNI 546
Query: 2116 NGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGD-PSPQIYSKIM 2292
NGVYFL LG+PT D +R VV+ L++ K G +++ E+ EA KL + PS Q+Y KIM
Sbjct: 547 NGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIMEAFKLALRKMPSNQLYQKIM 604
Query: 2293 KE 2298
KE
Sbjct: 605 KE 606
>ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [Amborella trichopoda]
gi|548839643|gb|ERM99903.1| hypothetical protein
AMTR_s00110p00061160 [Amborella trichopoda]
Length = 763
Score = 340 bits (871), Expect = 2e-90
Identities = 218/641 (34%), Positives = 346/641 (53%), Gaps = 13/641 (2%)
Frame = +1
Query: 415 DIDMDGNDVKVEEEKPDIAMDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPH-IDPDT 591
D+++ +EE + +D++ EDR++R ID+ P IDPDT
Sbjct: 123 DVELKVKKDSMEEVMEEAKVDMEIESEGLGSSDSSWKGGEDRLVRTIDLFLVPSPIDPDT 182
Query: 592 KVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQ 771
++Y+ QYPLR WR Y +ERCQEVR++PKQ + E DL +D+ YD N D+ ++I+KQ
Sbjct: 183 QLYINQYPLRACWRPYEFDERCQEVRIRPKQSKVEFDLTVDDKSPYYDPNTDDDMRITKQ 242
Query: 772 TLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKR--SRKAVNMG 945
TLTS +A LA Y +GIL G+KL L VQ +QLRP M H+ + D ++ SR +
Sbjct: 243 TLTSMEASLATGYGVGILSGSKLFLNRVQAVLQLRPSMDHLKKSAQDSRKNDSRTSEEPT 302
Query: 946 DDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNE 1125
+K K P+ + E ++ R +E EPWI LE +G ++ +
Sbjct: 303 TSNKKSKQESVGPSKIQATDEGQKASTSR---------EDEPEPWITLEYHGMESPTRDY 353
Query: 1126 LLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQL--HGDHTGNAGLSRSYLDSLK 1299
+K+VT E+ + M+ +HYI + +PGR S HG ++ LS D+L
Sbjct: 354 FWQKMVTEENSQQQLFMSVNHYITSWIPGRDSAPLERACINHGRGASDSSLS----DALS 409
Query: 1300 LQDRIKAIFSQKRIQVFRFESLMRFAS-GHSTEEVLNVVKTYAFLVQGCWVPASIFHYRG 1476
L++ IK + S+ + ++ FE LMR A G + +EVL V++ +A LVQG WVP S Y
Sbjct: 410 LEEHIKLLLSKGQNEILPFEILMRHAPVGLTEQEVLKVLQKHAHLVQGYWVPKSPLRYEA 469
Query: 1477 DLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE-VLSYIADQKPQEGCWVFREETDK 1653
+ C VRDY+LLLF K + I +++++ L K + E V++ + + + W F+ T K
Sbjct: 470 EYCKVRDYILLLFHKERVIQHDEVKGLLSWKTEIFEKVMNPLGSRNRELKRWEFKLPTQK 529
Query: 1654 TFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNISSGESLDQLKRSAV--- 1824
+F+++++ + ++Q+ WL E + + +K +ASN ++ S+V
Sbjct: 530 SFLQSHENVVEDQSRLWLSLEKHLMDSLPWLKN-----KASNSRVSSKINTKGSSSVAPL 584
Query: 1825 NGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSS-HVCNLKEIRQSLQNLAKV 2001
+G G+ K+ + S MS+E R +++ ALR++ HVC+L +R L++L
Sbjct: 585 SGRGDQPAKSVADGAQISERSIMSEEVREAISDALRDVFKKYHVCSLPMLRSGLRDLGIS 644
Query: 2002 KGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVV 2181
K V AAA GA A EL S +++VA NI+GVY LKSL NP +D R VV+
Sbjct: 645 KSVTPKAATRV-AAAAAHGAAASDAELLSHVNKVAVNIHGVYALKSLSNPLLDPLREVVI 703
Query: 2182 KLIRAKGPGAIIRKVEVFEACKLEVG--DPSPQIYSKIMKE 2298
L+ A P A ++KVEV +A K++ D P +Y +++ E
Sbjct: 704 SLLCASKPKAKLKKVEVMQAFKIKFNKEDVPPNVYKQVLTE 744
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 333 bits (854), Expect = 2e-88
Identities = 219/600 (36%), Positives = 328/600 (54%), Gaps = 11/600 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED V+REIDV F P +D ++K+Y++QYPLRP WR Y E RC EVRVKP EVDL +
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 712 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D NYD+ AD ++ KQTLTS+ + LA +YA+G+L GNKL+L PV VQLRP
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
H+ G K + V D + E+ V+ A S K + + + K +
Sbjct: 237 HLNSGGPKRKNN---VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEV-------KTRD 286
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
EE WI L+ YG ++ ++ L+ +V+ + F+M+ H Y+D+L PG TST+ N
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPG-TSTSGNKP--- 342
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
G S+ YL SL L++RIK + ++ V RF +L +A + TEE + ++ YA
Sbjct: 343 -----KGPSKKYLLSLSLEERIKKLLTEGP-PVQRFSALKHYAPDYETEEFIETLQQYAQ 396
Query: 1429 LVQGCWVPASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 1602
LVQG WVP S+F G RD+VL LFSKN + Q+ ++RV+ L+
Sbjct: 397 LVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFG 456
Query: 1603 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 1782
++P W F+E+TD+ F+ N+ I ++Q E W E F+ +++ + +N
Sbjct: 457 VERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVE-----KGFTFLRSIKSVHHANA 511
Query: 1783 SSGE-----SLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSS 1947
++G+ L++ S T N N K MS E+R +L AL+++ +
Sbjct: 512 ATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK-------GAMSDETREALPKALQKLFQN 564
Query: 1948 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 2124
H VC+ + I Q L++LA + T K +A +AAA G AP EL +I QVA+ I+G+
Sbjct: 565 HKVCSFQLICQGLRDLAVSQSTL-PKADARMAVAAAYGVDAPPDELXKIISQVATEIHGL 623
Query: 2125 YFL-KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDP-SPQIYSKIMKE 2298
Y L S +P D R VV++L+R +GP A+++K +V EA K E+G + YSK+M E
Sbjct: 624 YVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNE 683
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 333 bits (854), Expect = 2e-88
Identities = 219/600 (36%), Positives = 328/600 (54%), Gaps = 11/600 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED V+REIDV F P +D ++K+Y++QYPLRP WR Y E RC EVRVKP EVDL +
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 712 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D NYD+ AD ++ KQTLTS+ + LA +YA+G+L GNKL+L PV VQLRP
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
H+ G K + V D + E+ V+ A S K + + + K +
Sbjct: 237 HLNSGGPKRKNN---VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEV-------KTRD 286
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
EE WI L+ YG ++ ++ L+ +V+ + F+M+ H Y+D+L PG TST+ N
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPG-TSTSGNKP--- 342
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
G S+ YL SL L++RIK + ++ V RF +L +A + TEE + ++ YA
Sbjct: 343 -----KGPSKKYLLSLSLEERIKKLLTEGP-PVQRFSALKHYAPDYETEEFIETLQQYAQ 396
Query: 1429 LVQGCWVPASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 1602
LVQG WVP S+F G RD+VL LFSKN + Q+ ++RV+ L+
Sbjct: 397 LVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFG 456
Query: 1603 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 1782
++P W F+E+TD+ F+ N+ I ++Q E W E F+ +++ + +N
Sbjct: 457 VERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVE-----KGFTFLRSIKSVHHANA 511
Query: 1783 SSGE-----SLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSS 1947
++G+ L++ S T N N K MS E+R +L AL+++ +
Sbjct: 512 ATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK-------GAMSDETREALPKALQKLFQN 564
Query: 1948 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 2124
H VC+ + I Q L++LA + T K +A +AAA G AP EL +I QVA+ I+G+
Sbjct: 565 HKVCSFQLICQGLRDLAVSQSTL-PKADARMAVAAAYGVDAPPDELKKIISQVATEIHGL 623
Query: 2125 YFL-KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDP-SPQIYSKIMKE 2298
Y L S +P D R VV++L+R +GP A+++K +V EA K E+G + YSK+M E
Sbjct: 624 YVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNE 683
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 296 bits (758), Expect = 3e-77
Identities = 202/599 (33%), Positives = 314/599 (52%), Gaps = 10/599 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPH-IDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLA 708
ED V+REIDV F P D +TK+Y++QYPLRP+WR Y L ERC EVRVKP EVDL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 709 MDENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLM 885
+D + +NYD +A ++ KQTL TS K Y +G+L GNKL+L P+ VQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 886 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1065
+++ G KR + A K + + ++ S+K +Q ++ + +
Sbjct: 219 EYLSSG--GAKRKNNVTGDTNSAVKLEVSNEEESVGSLK------KQNKIMGILDEQNTD 270
Query: 1066 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLH 1245
E W+ L+ + ++ + L+K+V ++ I F M+ + Y+++L P S N
Sbjct: 271 AAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNR--- 327
Query: 1246 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 1425
+ GLSR +L S+ L++R K + + V RF +L FA +S E+VL V+ +A
Sbjct: 328 -----SKGLSRRFLLSMPLEERFKTLLCEGP-PVHRFSALKHFAPDNSVEDVLGVLTKHA 381
Query: 1426 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSY 1596
LVQG WVP S + +G L RDY+LLLFSK I+Y Q++ G + ++ LS
Sbjct: 382 HLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSI 441
Query: 1597 IADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQAS 1776
+A ++P W F+E TD +F++ + I +EQ W E KQ I
Sbjct: 442 LAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLE----------KQITDIIHGG 491
Query: 1777 NISSGESLDQLKRSAVNGTGELNKK---ANMKEKLQLDGSTMSQESRTSLALALREILSS 1947
+ + K S N TG K + + MS E+R +L AL E+
Sbjct: 492 GRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRL 551
Query: 1948 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 2124
H VC+ + I Q+L++LA K T+ K + +AAA GA AP EL ++I + A+ ++GV
Sbjct: 552 HKVCSFQLICQALRDLAVSKSTS-PKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 610
Query: 2125 YFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKE 2298
Y K+ + + R VVV L K P A +++ ++ EA K+ + + + Y+K++ E
Sbjct: 611 YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSE 669
>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 294 bits (752), Expect = 1e-76
Identities = 212/638 (33%), Positives = 337/638 (52%), Gaps = 21/638 (3%)
Frame = +1
Query: 448 EEEKPDIAMDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKVYMVQYPLRPH 627
EE K D M+ D+ ED ++REIDV F PHID ++++Y++QYPLRP
Sbjct: 93 EEPKEDDPMEEDDV--------------EDTIVREIDVFFNPHIDDNSQLYVLQYPLRPW 138
Query: 628 WRSYGLEERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTLTST---KAQL 798
WR Y LE RC+EVR+KP E+DL+++ + +NYD++ LK++KQTL +T
Sbjct: 139 WRPYELENRCEEVRLKPATSEMEIDLSLNLDPKNYDEDCGNRLKMTKQTLYTTWKPTRTT 198
Query: 799 AAAYAIGILRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEA 978
YA+G+L G+KL+L P+ + VQLRP + H+ G SR+ ++ DAE + +E
Sbjct: 199 GTGYAVGVLMGDKLHLNPIDKVVQLRPSLEHLKSG-----SSRRKNSVTGDAEVKVKLEE 253
Query: 979 KPALVSVKPETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDR 1158
S P ++ +++ + KK E+EE W+ L+ + ++ + + L ++V E
Sbjct: 254 SRQETSSGPSKKQTKRMESSTE---KKTEDEESWVPLQYHSSESDFSAKYLRRMVGQESS 310
Query: 1159 EIPFNMNSHHYIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKR 1338
I F M+ + Y+++L P RT G SR +L SL L++RIK + ++
Sbjct: 311 PIQFTMSPYDYVNSLCP-RTC--------------KGSSRRFLLSLPLEERIKKLLVEEP 355
Query: 1339 IQVFRFESLMR-FASGHSTEEVLNVVKTYAFLV--QGCWVPASIFHY-------RGDLC- 1485
+ RF L + FA H+ EE+L+V++ +A L+ G WVP ++ Y R +
Sbjct: 356 L-ARRFSDLKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDRDHVAR 414
Query: 1486 -LVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIADQKPQEGCWVFREETDKTFI 1662
R+YVL LF KN I QL K E L +A +P W +E++DK+F
Sbjct: 415 QTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQSDKSFK 474
Query: 1663 RNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNISS--GESLDQLKRSAVNGTG 1836
IFK Q + W + E+ + A + G++ + ++S G+SL+ K + + +
Sbjct: 475 ELYPDIFKSQEQNWERMEEKLVNAFKA--HTDRGVKNACMTSKPGKSLNSDKGTTKSAS- 531
Query: 1837 ELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTA 2013
+Q+ G TMS E+R +L A++E+L H VCN + I + L+ LA K +
Sbjct: 532 ----------DVQIGGRTMSDETRAALPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSL 581
Query: 2014 GNKKEAVKGMA-AAKGATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAYRNVVVKL 2187
K + AA G AP EL VI QVA++I+G+Y LKS + D R VV+ L
Sbjct: 582 PKVDPKTKRVIDAAYGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDL 641
Query: 2188 IRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKE 2298
+ KGP A +++ EVFEA K+ + D + Y+K+M +
Sbjct: 642 LCTKGPNAKLKRGEVFEAAKIALERDINTNEYNKVMND 679
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 293 bits (749), Expect = 3e-76
Identities = 212/595 (35%), Positives = 313/595 (52%), Gaps = 10/595 (1%)
Frame = +1
Query: 466 IAMDVD-----EXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHW 630
+AMDVD E ED ++REIDV P IDP+TK+Y++QYPLRP W
Sbjct: 77 VAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSIDPNTKLYVLQYPLRPLW 136
Query: 631 RSYGLEERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTLTST-KAQLAAA 807
R Y L++RC+EVRVK K EVDLA+D + +NYD +AD + ++KQTLTS+ K + A
Sbjct: 137 RPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAG 196
Query: 808 YAIGILRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPA 987
YA+G+L GNKL+L P+ VQLRP M H + KR A + +D K + V
Sbjct: 197 YAVGVLVGNKLHLNPIHAVVQLRPSMQHYKP--ESSKRRTTASSNLEDNTKGEEVTTGSL 254
Query: 988 LVSVKPETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIP 1167
KP EQ + + E WI L +G + ++ + K+V + I
Sbjct: 255 KKQGKPSGPVIEQNK----------DTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQ 304
Query: 1168 FNMNSHHYIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQV 1347
F+MN H Y++TL PG TSN ++ G+ G SR L SL L++R + Q +
Sbjct: 305 FSMN-HDYVNTLCPG----TSN-----ENNGSNGPSRVLL-SLPLEERFRTWLLQGP-PI 352
Query: 1348 FRFESLMRFASGHSTEEVLNVVKTYAFLVQGCWVPASIFHY---RGDLCLVRDYVLLLFS 1518
RF++L A S E++L V+ +A LVQG W+P S Y +G L RDYVLLLFS
Sbjct: 353 HRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFS 412
Query: 1519 KNKNIHYEQLEELGLPKERVREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNE 1698
+ I+ QL + +R+VL +A ++ W F+E D TFI+ N I +EQ +
Sbjct: 413 RTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQ 472
Query: 1699 QWLQNEDAIRKAAFSIKQALHGIQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQL 1878
W + E I + F K + ++ S L + + L+K A+ +
Sbjct: 473 TWERLEKLITEKIFGDK--------NRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGV 524
Query: 1879 DGSTMSQESRTSLALALREILSSHVCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKG 2058
MS+E+R +L AL+++ SH ++I Q L+ +A V ++ K A + +AAA G
Sbjct: 525 PRRPMSEETREALPKALQKLFQSHKVCFQQICQRLREMA-VSESSRPKGFAREAIAAAHG 583
Query: 2059 ATAPLGELTSVIDQVASNINGVYFLKSLG-NPTIDAYRNVVVKLIRAKGPGAIIR 2220
AP EL ++I QVA NI+GVY LKS +P D + VV +L ++G +++
Sbjct: 584 VEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEF--VVQELCVSQGSAWVLK 636
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 292 bits (748), Expect = 4e-76
Identities = 204/619 (32%), Positives = 318/619 (51%), Gaps = 8/619 (1%)
Frame = +1
Query: 466 IAMDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGL 645
+ M+++E ED V+REIDV F P ID +T++Y++QYPLRP WR Y L
Sbjct: 96 VKMEIEEEAKEDVIMNEGNREEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYEL 155
Query: 646 EERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGI 822
+ERC+EVRVKP E+DLA+D + NYD LK++KQTL+S+ YA+G+
Sbjct: 156 DERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGV 215
Query: 823 LRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVK 1002
L G+KL+L P+ VQLRP M H+ + +++ A + + E+P + K A S K
Sbjct: 216 LMGDKLHLNPIHAVVQLRPSMCHLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTK 274
Query: 1003 PETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNS 1182
Q +K +++E W+ L+ + N + + L++++ E I F M+
Sbjct: 275 QNKRMQSSTE-------QKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSP 327
Query: 1183 HHYIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFES 1362
+ Y+D+L PG ++N++ G SR L S+ L++R+K + S+ RF +
Sbjct: 328 YDYVDSLCPG---ASNNNKAQGP-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSA 376
Query: 1363 LMRFASGHSTEEVLNVVKTYAFLVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIH 1536
L FA S E++ V++ +A LVQG WVP S + D L RDYVLLLFSKN I
Sbjct: 377 LKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIIS 436
Query: 1537 YEQLEELG-LPKERVREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQN 1713
Q+ L KE V+ L +A ++P W +E D+ F + I K Q + W
Sbjct: 437 LAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAG 496
Query: 1714 EDAIRKAAFSIKQALHGIQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTM 1893
ED + I G + + A+N + + A + G TM
Sbjct: 497 EDNV------INHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTM 546
Query: 1894 SQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAP 2070
S E+R ++ AL+++ +H VC+L+ IR+ L++LA + T K +A + AA GA AP
Sbjct: 547 SDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAP 605
Query: 2071 LGELTSVIDQVASNINGVYFL--KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC 2244
EL V+ +VA ++G F+ S +P D R VV+ L+R KG ++K +V A
Sbjct: 606 EHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKGK---LKKADVSAAA 662
Query: 2245 KLEV-GDPSPQIYSKIMKE 2298
L + + S Y+K+M +
Sbjct: 663 LLSLKREISNNEYNKVMSD 681
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 291 bits (745), Expect = 9e-76
Identities = 203/599 (33%), Positives = 312/599 (52%), Gaps = 10/599 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPH-IDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLA 708
ED V+REIDV F P D +TK+Y++QYPLRP+WR Y L ERC EVRVKP EVDL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 709 MDENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLM 885
+D + +NYD +A ++ KQTL TS K Y +G+L GNKL+L P+ VQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 886 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1065
+++ G +++ N+ D +VK E +E+ S KK
Sbjct: 219 EYLSSG-----GAKRKNNVTGDTNS-----------AVKLEVSNEEE----SVGSLKK-- 256
Query: 1066 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLH 1245
+ W+ L+ + ++ + L+K+V ++ I F M+ + Y+++L P S N
Sbjct: 257 --QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNR--- 311
Query: 1246 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 1425
+ GLSR +L S+ L++R K + + V RF +L FA +S E+VL V+ +A
Sbjct: 312 -----SKGLSRRFLLSMPLEERFKTLLCEGP-PVHRFSALKHFAPDNSVEDVLGVLTKHA 365
Query: 1426 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSY 1596
LVQG WVP S + +G L RDY+LLLFSK I+Y Q++ G + ++ LS
Sbjct: 366 HLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSI 425
Query: 1597 IADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQAS 1776
+A ++P W F+E TD +F++ + I +EQ W E KQ I
Sbjct: 426 LAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLE----------KQITDIIHGG 475
Query: 1777 NISSGESLDQLKRSAVNGTGELNKK---ANMKEKLQLDGSTMSQESRTSLALALREILSS 1947
+ + K S N TG K + + MS E+R +L AL E+
Sbjct: 476 GRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRL 535
Query: 1948 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 2124
H VC+ + I Q+L++LA K T+ K + +AAA GA AP EL ++I + A+ ++GV
Sbjct: 536 HKVCSFQLICQALRDLAVSKSTS-PKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 594
Query: 2125 YFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKE 2298
Y K+ + + R VVV L K P A +++ ++ EA K+ + + + Y+K++ E
Sbjct: 595 YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSE 653
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 291 bits (744), Expect = 1e-75
Identities = 199/601 (33%), Positives = 307/601 (51%), Gaps = 12/601 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED ++REIDV F P ID D+K+Y++QYPLRP WR Y L+ERC+EVRVKP E+DL++
Sbjct: 110 EDMIVREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSI 169
Query: 712 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D + N+D L + KQTL++T A YAIG+L GNKL+L P+ VQLR M
Sbjct: 170 DVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMG 229
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
+ G K ++ E PV+ + + + +++ R+ S + ++ E
Sbjct: 230 FLKSGGSKRK---------NNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIE--QRSNE 278
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
EE W+ L+ +G + + L++++ E+ I F MN + Y+ +L PG S
Sbjct: 279 EECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGS--------- 329
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
++T + G SR +L S+ L++R K + + V RF +LM FA + E+V+ V+
Sbjct: 330 NNTKSKGPSRRFLLSMPLEERFKKLLCEGE-PVQRFSTLMHFAPNDTVEDVIGVLHKNGL 388
Query: 1429 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 1602
LVQG W P S + D CL RDYVLL FSKN + ++ L ++ ++ L+ A
Sbjct: 389 LVQGLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFA 448
Query: 1603 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 1782
++P W FR++TD +FI+ + I +Q + W E I + +
Sbjct: 449 VERPDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGK---------- 498
Query: 1783 SSGESL--DQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-V 1953
SG +L D K + VN + +N +S ESR +L AL+++ H V
Sbjct: 499 -SGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKV 557
Query: 1954 CNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAA--AKGATAPLGELTSVIDQVASNINGVY 2127
C+L I+Q L++LA + T + +AA + E VI QVA+NI+G Y
Sbjct: 558 CSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFY 617
Query: 2128 FLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC----KLEVGDPSPQIYSKIMK 2295
KS +P R VV L+ A GP A ++K +V EA K E+ + YSK+M
Sbjct: 618 VSKSSEDPQHGPLRKVVTDLLLAGGPDAKLKKADVVEAARHVLKREISNAE---YSKVMS 674
Query: 2296 E 2298
+
Sbjct: 675 D 675
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 289 bits (740), Expect = 3e-75
Identities = 207/582 (35%), Positives = 298/582 (51%), Gaps = 9/582 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED ++REIDV F P ID T++Y++QYPLRP WR Y L+ERC+EVRVKP+ EVDL +
Sbjct: 114 EDMIVREIDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTI 173
Query: 712 DENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D++ N+D KQTL TS YA+G+L GNKL+L P+ VQLRP +
Sbjct: 174 DDS-SNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLE 232
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
H+ +D KR A + + + E E KP S K
Sbjct: 233 HV--NSNDSKRKNSA-TLNPEVKLEDSNEGKPIGSSKK---------------------- 267
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
+ WI L+ +G + ++ LEK++ E + F M + Y+ +L P SN
Sbjct: 268 -QCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCP----VASN----- 317
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
+ T + G R +L SL L +R+K + + V RF L FA S E+VL V++ Y
Sbjct: 318 EKTKSKGPPRRFLLSLPLAERLKKLILEGP-PVQRFSVLKHFAPDDSVEDVLKVLQEYGQ 376
Query: 1429 LVQGCWVPAS--IFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 1602
LVQG W P S +F +RDYVLLLFSKN I+ Q+ KE ++ L+ A
Sbjct: 377 LVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFA 436
Query: 1603 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 1782
++P W F+E TD TFI+ I K+Q E W E + K S
Sbjct: 437 VERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKV----------FDRSGK 486
Query: 1783 SSGESLDQLKRSAVNGTGELNKKANMKE----KLQLDGSTMSQESRTSLALALREILSSH 1950
+S ++ N L+ + +M + +L +T++ E+R +L AL ++ SH
Sbjct: 487 ASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSH 546
Query: 1951 -VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVY 2127
VC+ + I Q L++LA + T K + +AAA GA AP EL +I QVA+NI+G Y
Sbjct: 547 KVCSFQLICQGLRDLAVSQSTL-PKADPRIAVAAASGADAPPEELQEIISQVATNIHGFY 605
Query: 2128 FLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKL 2250
LKS +P D R V++ L+ A+GP A ++K EVFEA +L
Sbjct: 606 VLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARL 647
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 289 bits (739), Expect = 4e-75
Identities = 200/602 (33%), Positives = 309/602 (51%), Gaps = 7/602 (1%)
Frame = +1
Query: 472 MDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEE 651
M+++E ED V+REIDV F P ID +T++Y++QYPLRP WR Y L+E
Sbjct: 1 MEIEEEAKEDVIMNEGNREEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDE 60
Query: 652 RCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILR 828
RC+EVRVKP E+DLA+D + NYD LK++KQTL+S+ YA+G+L
Sbjct: 61 RCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLM 120
Query: 829 GNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPE 1008
G+KL+L P+ VQLRP M H+ + +++ A + + E+P + K A S K
Sbjct: 121 GDKLHLNPIHAVVQLRPSMCHLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTKQN 179
Query: 1009 TERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHH 1188
Q +K +++E W+ L+ + N + + L++++ E I F M+ +
Sbjct: 180 KRMQSSTE-------QKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYD 232
Query: 1189 YIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLM 1368
Y+D+L PG ++N++ G SR L S+ L++R+K + S+ RF +L
Sbjct: 233 YVDSLCPG---ASNNNKAQGP-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSALK 281
Query: 1369 RFASGHSTEEVLNVVKTYAFLVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYE 1542
FA S E++ V++ +A LVQG WVP S + D L RDYVLLLFSKN I
Sbjct: 282 HFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLA 341
Query: 1543 QLEELG-LPKERVREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNED 1719
Q+ L KE V+ L +A ++P W +E D+ F + I K Q + W ED
Sbjct: 342 QVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGED 401
Query: 1720 AIRKAAFSIKQALHGIQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQ 1899
+ I G + + A+N + + A + G TMS
Sbjct: 402 NV------INHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTMSD 451
Query: 1900 ESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLG 2076
E+R ++ AL+++ +H VC+L+ IR+ L++LA + T K +A + AA GA AP
Sbjct: 452 ETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAPEH 510
Query: 2077 ELTSVIDQVASNINGVYFL--KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKL 2250
EL V+ +VA ++G F+ S +P D R VV+ L+R KG ++K +V A L
Sbjct: 511 ELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKGK---LKKADVSAAALL 567
Query: 2251 EV 2256
+
Sbjct: 568 SL 569
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 281 bits (719), Expect = 9e-73
Identities = 198/585 (33%), Positives = 305/585 (52%), Gaps = 13/585 (2%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED V+REIDV F P ID T++Y++QYPLRP WR Y L+ERC+EVRVKP E+DL++
Sbjct: 107 EDMVVREIDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSL 166
Query: 712 DENGENYDDNADEYLKISKQTLTSTKAQ-LAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D + +NYD + + L ++KQTL + Q A YA+G+L GNKL+L + +QLRP +
Sbjct: 167 DVDSKNYDPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLK 226
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVE---AKPALVSVKPETERQEQLRLRSYQHFKK 1059
H+ S+K N+ DAE +E K A+ S K +Q++ + +K
Sbjct: 227 HLISA-----GSKKKNNVKVDAEDTVKLEESSGKKAIGSSK------KQIKQENSSVKQK 275
Query: 1060 LEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQ 1239
+ +EE W+ L+ +G ++ + L K+ E + F M+ + Y+++L PG + +
Sbjct: 276 IADEEGWVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPK 335
Query: 1240 LHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKT 1419
G SR L SL L++RIK++ + V RF L FA +T+E+L+ ++
Sbjct: 336 ---------GPSRRALLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQN 386
Query: 1420 YAFLVQGCWVPASIF-----HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 1584
+A LVQG W P S G + RDYVLLLF KN + L K V +
Sbjct: 387 HALLVQGLWAPKSSLLLGTSKETGAQRIARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNK 446
Query: 1585 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 1764
L+ + ++P W F+ +TD +FI+N + K+Q E W E I F ++ G
Sbjct: 447 FLNILGVERPSVKDWKFKGQTDISFIKNYPDVVKKQEEVWGDLERDIMN-MFGDGKSGRG 505
Query: 1765 IQASNISSGESLDQLKRSAV-NGTGELNKKANMKEKLQLDGSTMSQESRTSL-ALALREI 1938
+ ++I S V GT E+ + G + + R L + L ++
Sbjct: 506 PKNTSIPSRPVKPLNSNKGVPKGTSEV-----------VGGKKIPDDIREVLCSKILPKV 554
Query: 1939 LSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNI 2115
+ H VC+L+ + Q L+ LA K K + AAA G +P GEL ++D+ A NI
Sbjct: 555 IQEHKVCSLQLMCQGLRELALNKLNL-PKADDRFARAAACGTASP-GELVKLLDETAINI 612
Query: 2116 NGVYFLKSLG-NPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACK 2247
+G+Y LKS +P D +RNVV+ L+R G A ++K E+F+A K
Sbjct: 613 HGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDAAK 657
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 278 bits (712), Expect = 6e-72
Identities = 213/642 (33%), Positives = 331/642 (51%), Gaps = 15/642 (2%)
Frame = +1
Query: 418 IDMDGNDVKVEEEKPDIAMDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKV 597
+++D + + K + MDVD+ +D V+REIDV + P +DP+T++
Sbjct: 81 MEIDAKEERGAAVKENDLMDVDKEEDE-----------DDVVVREIDVYYTPSVDPNTQL 129
Query: 598 YMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTL 777
Y++QYPLRP WR Y L+ERC+EVRVKP+ EVDL++D+ +NYD + L + KQTL
Sbjct: 130 YVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDT-KNYDPDIASRLNMKKQTL 188
Query: 778 TST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDA 954
+S+ A YA+G+L GNKL+L P+ VQLRP M +++ G + +K G+D+
Sbjct: 189 SSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSG---NSKGKKNATSGEDS 245
Query: 955 EKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLE 1134
+ KP+ ++Q + S + +K + EE WI L+ +G + +++ L+
Sbjct: 246 NEGKPLGLP------------KKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQ 293
Query: 1135 KLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRI 1314
+V E I F MN + Y+ +L PG + +N +L+G SR L SL L++RI
Sbjct: 294 NMVAPESSTIEFAMNPYDYMSSLCPG--ISNNNIKLNGP-------SRRVLLSLPLEERI 344
Query: 1315 KAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAFLVQGCWVPASIFHYRGD----- 1479
K +F + + RF +L S E++L V++ Y LVQG WVP + +
Sbjct: 345 KRLFLEGP-PIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEK 403
Query: 1480 -LCLVRDYVLLLFSKNKNIHYEQLEELGLPKER--VREVLSYIADQKPQEGCWVFREETD 1650
RDY+LLLFSK+ + EL +P + ++ L+ A ++P W F+E D
Sbjct: 404 VKLAARDYILLLFSKSLVV---TPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENVD 460
Query: 1651 KTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNISSGESLDQLKRSAVNG 1830
F+ I ++Q + W + NIS+ + D+ +S
Sbjct: 461 TLFVELYPDIVRKQEQAW-------------------EVMGKNISA--AFDRAGKS---- 495
Query: 1831 TGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-VC--NLKEIRQSLQNLAKV 2001
++K K K TM+ E+R +L AL ++L +H VC + I Q L+ LA
Sbjct: 496 ---VSKNVITKPK-----KTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAIS 547
Query: 2002 KGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFLKSL-GNPTIDAY-RNV 2175
+ T K + +AAA GA AP EL VI +VA+NI+G Y LKS +P D R V
Sbjct: 548 QSTL-PKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKV 606
Query: 2176 VVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKE 2298
V+ L A+GP A I+K EV A +LE+ +PS Y K+M +
Sbjct: 607 VIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTD 648
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 276 bits (706), Expect = 3e-71
Identities = 205/655 (31%), Positives = 322/655 (49%), Gaps = 44/655 (6%)
Frame = +1
Query: 466 IAMDVDEXXXXXXXXXXXXXXXEDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGL 645
+ M+++E ED V+REIDV F P ID +T++Y++QYPLRP WR Y L
Sbjct: 96 VKMEIEEEAKEDVIMNEGNREEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYEL 155
Query: 646 EERCQEVRVKPKQVRFEVDLAMDENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGI 822
+ERC+EVRVKP E+DLA+D + NYD LK++KQTL+S+ YA+G+
Sbjct: 156 DERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGV 215
Query: 823 LRGNKLNLTPVQEAVQLRPLMTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVK 1002
L G+KL+L P+ VQLRP M H+ + +++ A + + E+P + K A S K
Sbjct: 216 LMGDKLHLNPIHAVVQLRPSMCHLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTK 274
Query: 1003 PETERQEQLRLRSYQHFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNS 1182
Q +K +++E W+ L+ + N + + L++++ E I F M+
Sbjct: 275 QNKRMQSSTE-------QKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSP 327
Query: 1183 HHYIDTLVPGRTSTTSNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFES 1362
+ Y+D+L PG ++N++ G SR L S+ L++R+K + S+ RF +
Sbjct: 328 YDYVDSLCPG---ASNNNKAQGP-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSA 376
Query: 1363 LMRFASGHSTEEVLNVVKTYAFLVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIH 1536
L FA S E++ V++ +A LVQG WVP S + D L RDYVLLLFSKN I
Sbjct: 377 LKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIIS 436
Query: 1537 YEQLEELG-LPKERVREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQN 1713
Q+ L KE V+ L +A ++P W +E D+ F + I K Q + W
Sbjct: 437 LAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAG 496
Query: 1714 EDAIRKAAFSIKQALHGIQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTM 1893
ED + I G + + A+N + + A + G TM
Sbjct: 497 EDNV------INHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTM 546
Query: 1894 SQESRTSLALALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAP 2070
S E+R ++ AL+++ +H VC+L+ IR+ L++LA + T K +A + AA GA AP
Sbjct: 547 SDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAP 605
Query: 2071 LGELTSVIDQVASNIN-GVYFLKS--------------------------------LGNP 2151
EL V+ +VA ++ G++ L+S L NP
Sbjct: 606 EHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNP 665
Query: 2152 TIDA-----YRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKE 2298
+ + R VV+ L+R KG ++K +V A L + + S Y+K+M +
Sbjct: 666 SFSSELFFPCREVVINLLRVKGK---LKKADVSAAALLSLKREISNNEYNKVMSD 717
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 270 bits (689), Expect = 3e-69
Identities = 181/548 (33%), Positives = 281/548 (51%), Gaps = 8/548 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED ++REIDV F P ID D+K+Y++QYPLRP WR Y L+ERC+EVRVKP E+DL++
Sbjct: 110 EDMIVREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSI 169
Query: 712 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D + N+D L + KQTL++T A YAIG+L GNKL+L P+ VQLR M
Sbjct: 170 DVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMG 229
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
+ G K ++ E PV+ + + + +++ R+ S + ++ E
Sbjct: 230 FLKSGGSKRK---------NNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIE--QRSNE 278
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
EE W+ L+ +G + + L++++ E+ I F MN + Y+ +L PG S
Sbjct: 279 EECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGS--------- 329
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
++T + G SR +L S+ L++R K + + V RF +LM FA + E+V+ V+
Sbjct: 330 NNTKSKGPSRRFLLSMPLEERFKKLLCEGE-PVQRFSTLMHFAPNDTVEDVIGVLHKNGL 388
Query: 1429 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 1602
LVQG W P S + D CL RDYVLL FSKN + ++ L ++ ++ L+ A
Sbjct: 389 LVQGLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFA 448
Query: 1603 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 1782
++P W FR++TD +FI+ + I +Q + W E I + +
Sbjct: 449 VERPDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGK---------- 498
Query: 1783 SSGESL--DQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-V 1953
SG +L D K + VN + +N +S ESR +L AL+++ H V
Sbjct: 499 -SGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKV 557
Query: 1954 CNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAA--AKGATAPLGELTSVIDQVASNINGVY 2127
C+L I+Q L++LA + T + +AA + E VI QVA+NI+G Y
Sbjct: 558 CSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFY 617
Query: 2128 FLKSLGNP 2151
KS +P
Sbjct: 618 VSKSSEDP 625
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 261 bits (667), Expect = 9e-67
Identities = 188/590 (31%), Positives = 305/590 (51%), Gaps = 10/590 (1%)
Frame = +1
Query: 532 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 711
ED V+REIDV F P ID DTK+Y++QYPLRP WR Y L+E+C+EVR+KP EVDL++
Sbjct: 105 EDTVVREIDVYFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSI 164
Query: 712 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 888
D N + + LK +KQTL++T K A A+G+L G+KL+L P+ VQLRP
Sbjct: 165 DLESYNVEKATADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRH 224
Query: 889 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1068
++ G + K + N K T EQ + +K +
Sbjct: 225 YLDSGGSEKKNVATSNNQN------------------KQTTPSMEQKSDGAPSIEQKSDS 266
Query: 1069 EEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLHG 1248
+ W+ LE +G + +++ +++VT E I F M+++ YI TL PG +S T
Sbjct: 267 NQCWVPLEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTL------ 320
Query: 1249 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 1428
G S+ YL SL ++ R++ + + + RF ++ FA S +E+L+V++ A
Sbjct: 321 ----AKGPSKRYLLSLPVEKRLQTLLIEGP-PLHRFSAIKHFAPECSDDELLSVLEKQAQ 375
Query: 1429 LVQGCWVPAS--IFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPK--ERVREVLSY 1596
L++G WVP S +F G L R+Y+L+ F K+ + ++L LG + R++ +
Sbjct: 376 LLRGYWVPRSSLLFPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQ 435
Query: 1597 IA----DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 1764
A D K +E W F+E D++FI+ I+ K+Q E + E+ + SI L G
Sbjct: 436 FALEKFDLKSKENYWKFKELPDESFIKEFPIVVKKQEEIFKILENEVN----SIIGTLGG 491
Query: 1765 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILS 1944
+ S + + + T + ++ E TMS E+R +L +AL+++
Sbjct: 492 --KRKLKSAITNSGVNNALFTSTNSDPRATSLGED-PPRSMTMSSETRHALPIALKKLFQ 548
Query: 1945 SH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNING 2121
+H VC+ + I Q L+ LA + T K + + AA P EL +++ +VA +I+G
Sbjct: 549 THKVCSFQLICQELRGLALAQ-TMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHG 607
Query: 2122 VYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDPSP 2271
Y LKS N D +R+VV+ ++R GP ++K E+ EA + ++G P
Sbjct: 608 CYVLKSAQN---DPFRDVVIDMLRGSGPNGKLKKAEILEAARRKLGRDVP 654
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 259 bits (662), Expect = 4e-66
Identities = 186/605 (30%), Positives = 306/605 (50%), Gaps = 17/605 (2%)
Frame = +1
Query: 535 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 714
D ++REIDVC P DP T++Y+ QYPL+ WR Y LEERCQEVR++P EVDLA+D
Sbjct: 92 DEIVREIDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151
Query: 715 ENGENYDDNADEYLKISKQTLTSTKAQL---AAAYAIGILRGNKLNLTPVQEAVQLRPLM 885
+ +N+D ++ + KQ L+++ L + YA+G+L G+KL+L PV VQLRP
Sbjct: 152 LDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSK 211
Query: 886 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1065
++ + ++K++ N E E E +P V P ++ + + +
Sbjct: 212 RNLKE--SELKKNIITNNDEKSVENEDVKEKRP----VGPSKKQNKSPGIEK-------D 258
Query: 1066 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDREIPFNMNSHHYIDTLVPGRTSTTSNHQLH 1245
E W+ L+ +G + ++ L+K+ E +PF+M+ Y++ PGR + T +
Sbjct: 259 IGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLK-- 316
Query: 1246 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 1425
+ R+ L L L++R++ I+ + + RF++LM A +S +E++ V++ YA
Sbjct: 317 --------ILRTRLSQLPLEERVR-IWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYA 367
Query: 1426 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSK----NKNIHYEQLEELGLPKERVRE 1584
LVQG WVP S Y G L R++VL F+K K++ + E L +
Sbjct: 368 QLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFL----KAATP 423
Query: 1585 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 1764
L +A ++P W +E DK F + +EQ W G
Sbjct: 424 ALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATW----------------ECLG 467
Query: 1765 IQASNISSGESLDQLKRSAVNGTGELN--KKANMKEKLQLDGSTMSQESRTSLALALREI 1938
Q +++ G ++ +N ++ + L ++MS+E R +L AL+E+
Sbjct: 468 KQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEIREALPKALQEV 527
Query: 1939 LSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAKGATAPLGELTSVIDQVAS 2109
++ VC+ ++IRQ L+ L K G ++A+ A+ AP E+ +VI+QVA
Sbjct: 528 FRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAI--TASVDVFDAPQEEIQAVINQVAV 585
Query: 2110 NINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVG-DPSPQIYS 2283
NI+GVY LKS NP D R +V+ L A+GP A ++K V EA KL++ D + +
Sbjct: 586 NIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFL 645
Query: 2284 KIMKE 2298
K+MKE
Sbjct: 646 KVMKE 650