BLASTX nr result

ID: Ephedra28_contig00006787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006787
         (767 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17384.1| unknown [Picea sitchensis]                             213   4e-53
gb|ACN41214.1| unknown [Picea sitchensis]                             147   5e-33
ref|XP_001775093.1| predicted protein [Physcomitrella patens] gi...   115   1e-23

>gb|ABR17384.1| unknown [Picea sitchensis]
          Length = 307

 Score =  213 bits (543), Expect = 4e-53
 Identities = 110/198 (55%), Positives = 143/198 (72%)
 Frame = -3

Query: 594 HPSQDDIKNELQDHIRNLHSQDQNXXXXXXXXXXXXXXVSSAENYLSPAGKQLSLLLVTS 415
           HPSQ++I+ E++D IRNLHS++Q               + SAE YL PA  QLSLLL  +
Sbjct: 38  HPSQENIRKEVEDEIRNLHSENQVTVAKAAAALVMVATLPSAEPYLLPAVTQLSLLLENA 97

Query: 414 ESIFVQRNACAALSAIMNSSFQNYKTIVQLPSLMERLLLCLEDNNSDKALQINVVSAISI 235
            SI V+RNACAAL+AIMN+S  +Y  + +   LMERLL CLE+ + DK LQINVV+A+++
Sbjct: 98  GSIHVRRNACAALTAIMNASLHHYIAVAESSHLMERLLQCLENEDGDKGLQINVVAAVTV 157

Query: 234 MAQHSEGLKIIQAAEADTKLISLLDSNDDTKLEEEITDALCALAVHEEMRPYLVTKGIIP 55
           +AQ  EGL++I+  EAD KL+SLL+  DD  LEEEITDALCALAVH+EMR +LV KG + 
Sbjct: 158 LAQRGEGLQVIKETEADVKLLSLLECTDDASLEEEITDALCALAVHQEMRSHLVMKGAVS 217

Query: 54  KFVRKLKADSTEICVRVL 1
           +   KL+ DS+EICVRVL
Sbjct: 218 RLAVKLRTDSSEICVRVL 235


>gb|ACN41214.1| unknown [Picea sitchensis]
          Length = 194

 Score =  147 bits (370), Expect = 5e-33
 Identities = 71/122 (58%), Positives = 93/122 (76%)
 Frame = -3

Query: 366 MNSSFQNYKTIVQLPSLMERLLLCLEDNNSDKALQINVVSAISIMAQHSEGLKIIQAAEA 187
           MN+S  +Y  + +   LMERLL CLE+ + DK LQINVV+A++++AQ  EGL++I+  EA
Sbjct: 1   MNASLHHYIAVAESSHLMERLLQCLENEDGDKGLQINVVAAVTVLAQRGEGLQVIKETEA 60

Query: 186 DTKLISLLDSNDDTKLEEEITDALCALAVHEEMRPYLVTKGIIPKFVRKLKADSTEICVR 7
           D KL+SLL+  DD  LEEEITDALCALAVH+EMR +LV KG + +   KL+ DS+EICVR
Sbjct: 61  DVKLLSLLECTDDASLEEEITDALCALAVHQEMRSHLVMKGAVSRLAVKLRTDSSEICVR 120

Query: 6   VL 1
           VL
Sbjct: 121 VL 122


>ref|XP_001775093.1| predicted protein [Physcomitrella patens]
           gi|162673544|gb|EDQ60065.1| predicted protein
           [Physcomitrella patens]
          Length = 395

 Score =  115 bits (289), Expect = 1e-23
 Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
 Frame = -3

Query: 588 SQDDIKNELQDHIRNLHSQDQNXXXXXXXXXXXXXXVSSAENYLSPAGKQL-SLLLVTSE 412
           S  D++ E+Q  I NL + D                +  A   L  A   L  LL   S 
Sbjct: 84  STKDVRQEIQKEIANLETGDHLVMAKAAASIVMLATLPDAVPSLEAAIPHLVPLLQDISL 143

Query: 411 SIFVQRNACAALSAIMNSSFQNYKTIVQLPSLMERLLLCLEDNNS---DKALQINVVSAI 241
           S+ VQRNACAAL++IM +    Y    + P L E L+ CL+ +     D+ LQ+N  + I
Sbjct: 144 SVHVQRNACAALTSIMTADPSLYLAAAKTPMLGEGLVQCLKGDGESPFDEGLQLNAAAGI 203

Query: 240 SIMAQHSEGLKIIQAAEADTKLISLLDSNDDTKLEEEITDALCALAVHEEMRPYLVTKGI 61
           S++AQ  EGL ++Q A+A+  +IS L S  D  ++EEI DALCAL+ H ++R  L  KG 
Sbjct: 204 SVLAQSVEGLLVLQEADAENAIISSLCSASDANVKEEIVDALCALSSHPDIRNSLFLKGA 263

Query: 60  IPKFVRKLKADSTEICVRVL 1
           + +  + ++  S EICVR L
Sbjct: 264 VEQLAKVIQGASAEICVRGL 283


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