BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006657
         (3124 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   210   4e-51
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   208   1e-50
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   206   5e-50
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     205   9e-50
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   203   4e-49
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   202   1e-48
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   200   3e-48
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   199   5e-48
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   199   8e-48
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-47
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   196   5e-47
ref|XP_006645333.1| PREDICTED: pentatricopeptide repeat-containi...   195   9e-47
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   194   2e-46
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   194   3e-46
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus...   193   3e-46
ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group] g...   193   3e-46
gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indi...   192   8e-46
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi...   191   1e-45
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   186   4e-44
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   186   7e-44

>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  210 bits (534), Expect = 4e-51
 Identities = 124/410 (30%), Positives = 208/410 (50%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            ++   EW NE E++L  + I +++  V+  LK L+  P KAL+FF+W  K   +    ++
Sbjct: 206  VVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERY--ECNT 263

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            + +NA+ RV            +++EMK     ++  T +++  + Q ++ + GD   +Y 
Sbjct: 264  ITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQ-KNKLMGDAVKLYE 322

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
            + ++   K PS + C  ++  +S +   +++    VV  +   G  + K +YD +HR LT
Sbjct: 323  FMMDGPFK-PSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLT 381

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
              G F             G+ PD +TY+ L+FGLCKA+ L+EAC  + E++  G   D K
Sbjct: 382  SIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIK 441

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC A+E  KAL   + M+   C+    L+  L+    S+ R   A+ L   +
Sbjct: 442  TWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDM 501

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
            V++  L P   TY+ +I KL     ++EA  +  LMK H +  F EP  + I+R G   D
Sbjct: 502  VDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDD 561

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSP 2463
            A  FL     K   S  + + ++++F   G+H  A+ L+ K P HI K P
Sbjct: 562  AADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHP 611


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  208 bits (530), Expect = 1e-50
 Identities = 126/416 (30%), Positives = 204/416 (49%)
 Frame = +1

Query: 1252 WCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIHNAM 1431
            W +E E+KL  L    S+  V+  L+ L+G P KALRFF W  + P  G   SS+ +N +
Sbjct: 214  WSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECP--GYEHSSITYNVI 271

Query: 1432 VRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKVEKE 1611
             RV            +++EMK+K   ++  T +++  + Q    +  D   +Y   ++  
Sbjct: 272  ARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLE-DAVKLYEIMMDGP 330

Query: 1612 KKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAGRFX 1791
             K PS + C  ++  +S ++  ++     V + +   G  + K +YD +HR LT  GRF 
Sbjct: 331  YK-PSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFD 389

Query: 1792 XXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWEVLI 1971
                        G  PD +TY+ L++GLCKA+ L+EAC  + E++  G   D K W +LI
Sbjct: 390  EAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILI 449

Query: 1972 QAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQKNL 2151
            Q HC A E  KAL  F+ M+   C+    L++ L+    S+ R   A+ L+  +V   +L
Sbjct: 450  QGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHL 509

Query: 2152 TPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYSFLT 2331
             P   TY+ +I KL     ++EA  +  LMK   Y  F EP  + I++ G   DA  FL 
Sbjct: 510  VPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGEFLN 569

Query: 2332 KTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETSSD 2499
                K   S  + + ++++F   G+   A+ L+ K P HI K P +  +     S+
Sbjct: 570  ALSAKKYPSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKLFGSAKSE 625


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
            gi|548855973|gb|ERN13836.1| hypothetical protein
            AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  206 bits (524), Expect = 5e-50
 Identities = 126/409 (30%), Positives = 207/409 (50%)
 Frame = +1

Query: 1231 RILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSS 1410
            ++L D EW  E + KL+SL +P+S+  ++  L+ ++ +P KAL F+ W    P    S+ 
Sbjct: 149  KLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFRHSA- 207

Query: 1411 SVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMY 1590
             + +N+++RV       +    +++EMK   F ++  + ++L  R Q  + +  +  ++Y
Sbjct: 208  -ITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLK-EAVELY 265

Query: 1591 IWKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCL 1770
             +  E   + PS + C  ++  L+ +     D    VVK F   G  + K IYD +HR L
Sbjct: 266  EFMSEGPYQ-PSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRSL 324

Query: 1771 TKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDH 1950
            T  GRF             GF+PD +TY+ LIFGLCKA   DEAC  + E++  G   D 
Sbjct: 325  TSMGRFDEAQNILEAMEKAGFIPDNITYSQLIFGLCKAHRFDEACKFLDEMEALGCTPDL 384

Query: 1951 KPWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICA 2130
            K W +LIQ HC A E  +AL  F  M+    E    L++ LV   C++ R  DA+ L+  
Sbjct: 385  KTWTILIQGHCLAGEVKEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAYTLLSV 444

Query: 2131 IVEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSS 2310
            ++ + +L P   TY+ +I  L    M++EA K+  LMK  +   F +P    I++ G + 
Sbjct: 445  MMTKTHLKPWQATYKILIEGLLGRRMLEEALKLLLLMKKQKLPAFVDPFIGYISKNGMAE 504

Query: 2311 DAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAK 2457
            DA   L       + S    + +++AF   G+   A+ L+ + P HI K
Sbjct: 505  DAMDLLKTLTLGQNPSSAVYVNIFEAFMKEGRFTDAQDLLHRFPHHIRK 553


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  205 bits (522), Expect = 9e-50
 Identities = 122/416 (29%), Positives = 203/416 (48%)
 Frame = +1

Query: 1249 EWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIHNA 1428
            +W +E E++L  + + +S+  V+  LK L+  P KA  FF W  + P  G   +SV +NA
Sbjct: 212  QWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYP--GYEHNSVTYNA 269

Query: 1429 MVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKVEK 1608
              RV            +I+EMK   + ++    +++  + Q +  +  D   +Y + ++ 
Sbjct: 270  AARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQ-KSKMMEDSVKLYEFMMDG 328

Query: 1609 EKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAGRF 1788
              K PS + C  ++  +S     +   A  V K +   G  + K  YD +HR LT AGRF
Sbjct: 329  PFK-PSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRF 387

Query: 1789 XXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWEVL 1968
                         G+ PD +TY+ L+FGLCKA+ L+EA   + E++  G   D K W +L
Sbjct: 388  DEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCTPDIKTWTIL 447

Query: 1969 IQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQKN 2148
            IQ HC A E  K L  F  M+  +C V   L+  L+    S+ +   A+DL+  +V++  
Sbjct: 448  IQGHCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIELVDKAR 507

Query: 2149 LTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYSFL 2328
            + P   TY+ +I K+     ++EA  +  LMK H+Y  + +P    I++ G   +A  FL
Sbjct: 508  VIPWQATYKNLIEKMLEVRKLEEAMNLLRLMKKHKYPPYHDPFVPYISKFGTVEEAAEFL 567

Query: 2329 TKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETSS 2496
                 K + S  +   ++++F   G+H  A+ L+ K P HI K   +  +   T S
Sbjct: 568  KALSVKKNPSPSAYFHIFESFFREGRHSEAKDLLFKCPHHIRKHRDIAKLFGSTQS 623


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  203 bits (516), Expect = 4e-49
 Identities = 135/479 (28%), Positives = 225/479 (46%)
 Frame = +1

Query: 1081 MKRLENDEGVENRTHKRERRIADDEDDTENKRLQKXXXXXXXXXXXXXISRILKDKEWCN 1260
            +K  + D  V    H  ER I ++  D + K++                  ++   EW +
Sbjct: 172  LKTGKMDADVSAFKHFYERMIQENAGDEDVKKVMD----------------VVLGAEWSD 215

Query: 1261 ETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIHNAMVRV 1440
            + E++L  + + +SE+ V+  L+ L+  P KALRFF W  +    G   +SV +N M  V
Sbjct: 216  KVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCA--GYEHNSVTYNGMSLV 273

Query: 1441 ACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKVEKEKKT 1620
                        +I+EMK     ++  T ++L  + Q    +  D   +Y   ++   K 
Sbjct: 274  LGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVE-DAVKLYELMMDGPYK- 331

Query: 1621 PSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAGRFXXXX 1800
            PS +    ++  +S N   ++D    VVK F   G  + K +YD +HR LT  GRF    
Sbjct: 332  PSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEAE 391

Query: 1801 XXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWEVLIQAH 1980
                     GF PD +TY+ ++FGLCKAK LDEAC  + ++++ G   D K W +LIQ H
Sbjct: 392  DTLIAMRNAGFEPDNITYSQVVFGLCKAKKLDEACKLLDDMEENGCVPDIKTWMILIQGH 451

Query: 1981 CDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQKNLTPS 2160
            C A+E  KAL  F+ M+  EC+    ++  L+  L  + +   A+ L+  ++   ++ P 
Sbjct: 452  CAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYKLLIEMLNTAHVRPW 511

Query: 2161 HDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYSFLTKTG 2340
              T++ +I  L  +  ++EA ++  LMK   Y  + EP    I++ G   DA  F     
Sbjct: 512  QATFKNLIQNLLGARKLEEAMELLCLMKKQGYPPYPEPFVGYISKFGSVEDASEFFKALS 571

Query: 2341 KKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETSSDKLPSAA 2517
             K   S  + + ++K+F   G+H  A+ L+ K P HI K   +  +   T   K  + A
Sbjct: 572  VKEYPSNAAYVHVFKSFFKEGRHSEAKDLLYKCPHHIRKLGEVRKLFGATERSKTTAIA 630


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  202 bits (513), Expect = 1e-48
 Identities = 122/436 (27%), Positives = 219/436 (50%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            ++   +W ++  +KL  + I +S+  V+  LK L+  P KAL FF W  +    G   ++
Sbjct: 209  VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS--GYKHNT 266

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            + +N ++RV       +    +++EMK + + ++  T +++  + Q +  I  D   ++ 
Sbjct: 267  ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ-KFRIMEDAVKLFE 325

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
            + ++   K PS + C  ++  +S+    ++     V   +   G  + K +YD +HR LT
Sbjct: 326  FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
            K GRF             GF PD +TY+ +IFGLCKA   ++AC  + E+++ G   D K
Sbjct: 385  KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC A+E  +AL  F+ M+    +    L+  L+    S+ R   A+ L+  +
Sbjct: 445  TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
            +E+ +L P   T++ +I KL  +  ++EA  +  LMK   Y  F EP  + I++ G + D
Sbjct: 505  IEKVHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTAED 564

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETS 2493
            A  FL     K   S  + + ++++F N G+H  A+ L+ K P HI +   +  +     
Sbjct: 565  ASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624

Query: 2494 SDKLPSAASSLTVPSR 2541
            S+K       +T+PSR
Sbjct: 625  SNK-------VTIPSR 633


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  200 bits (509), Expect = 3e-48
 Identities = 128/427 (29%), Positives = 212/427 (49%), Gaps = 2/427 (0%)
 Frame = +1

Query: 1225 ISRILKDKEWCNETEEKLNSLSIPISEEDVMPALKILK--GNPGKALRFFSWYSKSPAHG 1398
            +S ++  +EW  E E +L  + + +S+  V+  LK L+  GNP KA  FF W +++    
Sbjct: 205  VSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDF- 263

Query: 1399 QSSSSVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDI 1578
               S+V +N ++RV C +   +    +++EM +  F ++  T +++    Q    +  D 
Sbjct: 264  -QHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLK-DA 321

Query: 1579 ADMYIWKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSL 1758
             ++Y   ++ + K PS   C  ++  ++ +  +++D    VV+ F   G    K IYD +
Sbjct: 322  VELYELMMDGQFK-PSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVI 380

Query: 1759 HRCLTKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGF 1938
            HRCLT  GRF             GF PD +TY+ LI+GLCK + L+EA   I  +++ G 
Sbjct: 381  HRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGC 440

Query: 1939 KFDHKPWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHD 2118
              D K W VLIQ HC A E  KAL  F+ M+    +    L+  L+    S+ R   A+ 
Sbjct: 441  IPDIKTWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQ 500

Query: 2119 LICAIVEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARC 2298
            L+  +V +  + P   TY+ VI KL      +EA  +   MK H Y  F EP  + I++ 
Sbjct: 501  LLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKS 560

Query: 2299 GRSSDAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSV 2478
            G   DA  FL     K   S  +   ++++F   G+H  A+ L+ K P HI + P +  +
Sbjct: 561  GTVEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPYHIRQHPAICGL 620

Query: 2479 IKETSSD 2499
               ++S+
Sbjct: 621  FGSSNSN 627


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  199 bits (507), Expect = 5e-48
 Identities = 121/436 (27%), Positives = 217/436 (49%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            ++   +W ++  +KL  + I +S+  V+  LK L+  P KAL FF W  +    G   ++
Sbjct: 209  VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS--GYKHNT 266

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            + +N ++RV       +    +++EMK + + ++  T +++  + Q +  +  D   ++ 
Sbjct: 267  ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ-KFRMMEDAVKLFE 325

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
            + ++   K PS + C  ++  +S+    ++     V   +   G  + K +YD +HR LT
Sbjct: 326  FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
            K GRF             GF PD +TY+ +IFGLCKA   ++AC  + E+++ G   D K
Sbjct: 385  KLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEENGCIPDIK 444

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC A+E  +AL  F+ M+    +    L+  L+    S+ R   A+ L+  +
Sbjct: 445  SWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
            +E+  L P   T++ +I KL  +  ++EA  +  LMK   Y  F EP  + I++ G   D
Sbjct: 505  IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETS 2493
            A  FL     K   S  + + ++++F N G+H  A+ L+ K P HI +   +  +     
Sbjct: 565  ASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624

Query: 2494 SDKLPSAASSLTVPSR 2541
            S+K       +T+PSR
Sbjct: 625  SNK-------VTIPSR 633


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  199 bits (505), Expect = 8e-48
 Identities = 128/459 (27%), Positives = 212/459 (46%)
 Frame = +1

Query: 1081 MKRLENDEGVENRTHKRERRIADDEDDTENKRLQKXXXXXXXXXXXXXISRILKDKEWCN 1260
            +K+ + D  V    H  ER + D+  D   K+                ++ ++   EW  
Sbjct: 190  LKKGKMDNDVVAFKHFFERMMKDNATDEVAKK----------------VADVVSGSEWSA 233

Query: 1261 ETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIHNAMVRV 1440
              E++L  L I +S+  V+  LK L+  P KAL FF W  +S   G   +++ +NA+ R+
Sbjct: 234  GIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHWVGQSS--GYEHNTITYNAVARI 291

Query: 1441 ACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKVEKEKKT 1620
                        +I+EMK     ++  T +++  + Q +  +  D   +Y   ++   K 
Sbjct: 292  LAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQ-KSKMMEDAVKLYELMMDGPYK- 349

Query: 1621 PSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAGRFXXXX 1800
            PS + C  ++  +S N + ++D    V K F   G  + K +YD +HR LT AG F    
Sbjct: 350  PSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEAE 409

Query: 1801 XXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWEVLIQAH 1980
                     G+ PD +TY+ L+FGLCKAK L+EAC  + E++  G   D   W +LIQ H
Sbjct: 410  KITKVMRNAGYEPDNITYSQLVFGLCKAKRLEEACKVLDEMEANGCVPDIMTWTILIQGH 469

Query: 1981 CDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQKNLTPS 2160
            C A+E   AL  F+ M+   C+    L+  L+     + +   A+ L+  +V    L P 
Sbjct: 470  CAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLIEMVNMTRLRPW 529

Query: 2161 HDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYSFLTKTG 2340
              TY+ +I  L     + EA  +  LMK   Y  + +P  + +++ G   DA  F     
Sbjct: 530  QATYKNLIENLLGVRKLDEAFALLHLMKKQSYPPYPDPFVQYLSKFGSVEDAAEFFKALS 589

Query: 2341 KKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAK 2457
             K   S  + + ++K+F   G+   A+ L+ K P HI K
Sbjct: 590  VKEYPSSAAYVHVFKSFFKEGRDSEAKELLYKCPYHIRK 628


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  198 bits (503), Expect = 1e-47
 Identities = 126/427 (29%), Positives = 211/427 (49%), Gaps = 2/427 (0%)
 Frame = +1

Query: 1225 ISRILKDKEWCNETEEKLNSLSIPISEEDVMPALKILK--GNPGKALRFFSWYSKSPAHG 1398
            +S ++   EW  E E +L  + +P+S+  V+  LK L+  G P KA  FF W +++    
Sbjct: 205  VSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDF- 263

Query: 1399 QSSSSVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDI 1578
               +++ +N ++RV C +   +    +++EM +  F ++  T +++    Q    +  D 
Sbjct: 264  -QHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLK-DA 321

Query: 1579 ADMYIWKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSL 1758
             ++Y   ++ + K PS   C  ++  ++ +  +++D    VV+ F   G    K IYD +
Sbjct: 322  VELYELMMDGQFK-PSLGECNILLRSIAQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVI 380

Query: 1759 HRCLTKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGF 1938
            HRCLT  GRF             GF PD +TY+ LI+GLCK + L+EA   I  +++ G 
Sbjct: 381  HRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGC 440

Query: 1939 KFDHKPWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHD 2118
              D K W VLIQ HC A E  KAL  F+ M+    +    L+  L+    S+ R   A+ 
Sbjct: 441  IPDIKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDADLLDVLLNGFLSQRRVFGAYQ 500

Query: 2119 LICAIVEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARC 2298
            L+  +V +  + P   TY+ VI KL      +EA  +   MK H Y  F EP  + I++ 
Sbjct: 501  LLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKS 560

Query: 2299 GRSSDAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSV 2478
            G   DA  FL     K   S  +   ++++F   G+H  A+ L+ K P HI + P +  +
Sbjct: 561  GTVEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPHHIRQHPAICGL 620

Query: 2479 IKETSSD 2499
               ++S+
Sbjct: 621  FGSSNSN 627


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  196 bits (498), Expect = 5e-47
 Identities = 123/411 (29%), Positives = 202/411 (49%)
 Frame = +1

Query: 1225 ISRILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQS 1404
            + RI+ ++EW  E E+KL  + I +++  V+  LK L+  P KALRFF W  +    G  
Sbjct: 62   VVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRR--EGYQ 119

Query: 1405 SSSVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIAD 1584
             ++V +NA+VRV            ++ EMK   + ++  T +++  + Q +  +  D   
Sbjct: 120  HNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQ-KIKLMEDAVR 178

Query: 1585 MYIWKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHR 1764
            +Y + ++   K PS + CY ++  ++ +   ++D    VV  ++  G  + K +YD +HR
Sbjct: 179  LYEFMMDGPFK-PSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHR 237

Query: 1765 CLTKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKF 1944
              T AG+F             G+ PD +TY+ L+FGLCK+K L+EAC  + E++  G   
Sbjct: 238  SFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIP 297

Query: 1945 DHKPWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLI 2124
            D K W +LIQ H  A++  K L     M     +    L+  LV    S+ +   A+  +
Sbjct: 298  DIKTWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTFL 357

Query: 2125 CAIVEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGR 2304
              +V +  L P   TY+ +I KL     ++EA  +  LMK H Y  F EP  + I++ G 
Sbjct: 358  VEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFGT 417

Query: 2305 SSDAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAK 2457
              DA +F      K   S  + + M  +F   G+   AR L+ K P HI K
Sbjct: 418  VEDAVNFFKVLSVKEYPSSVAYLRMLDSFLREGRDSEARDLLFKCPHHIRK 468


>ref|XP_006645333.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Oryza brachyantha]
          Length = 562

 Score =  195 bits (496), Expect = 9e-47
 Identities = 131/429 (30%), Positives = 213/429 (49%)
 Frame = +1

Query: 1231 RILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSS 1410
            R L+  E   E ++KL  + +P++E  V   L+ ++ +P KAL FF W  +    G +  
Sbjct: 141  RGLEGSEAAAELDKKLEGVDLPLTETAVARVLREVRDHPIKALAFFRWAGRQM--GYTHG 198

Query: 1411 SVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMY 1590
            SV +NAM RV       +   + IQEMKA    V+  T ++L  + Q +  ++ +  ++Y
Sbjct: 199  SVAYNAMARVLGRDESMREFWEHIQEMKASGMHVDIDTYVKLSRQFQKRHMLT-EAVELY 257

Query: 1591 IWKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCL 1770
               ++   K PS +    ++  ++     ++     VV+ F        K ++D +HR L
Sbjct: 258  ELMMDGPYK-PSKQDGPVLIRRIALGPSPDLQLVYRVVRKFEAVWEFKTKDVFDGIHRAL 316

Query: 1771 TKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDH 1950
            T  GRF             G  PD +TY+ LIFGLCKA  LD+A   + E++ EG   D 
Sbjct: 317  TSNGRFDEAAEIVKRMKGEGHQPDNITYSQLIFGLCKADRLDDAHKVLDEMEAEGCIPDL 376

Query: 1951 KPWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICA 2130
            K W +LIQ HC A E  KAL+ F+ M+    E    L+  +V  LCS  +   ++ L   
Sbjct: 377  KTWTMLIQGHCVAGEVEKALQYFAEMIEKNLEADADLLDVMVKGLCSHDKVDASYALFVE 436

Query: 2131 IVEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSS 2310
            +V++  L+P   TY+ +I +L   + ++EA  +   MK H+++ F +P    IA+ G   
Sbjct: 437  MVDKAKLSPWQGTYKYIIGELLRVNKLEEALGLLRSMKAHKFQPFADPFPTHIAKYGTFD 496

Query: 2311 DAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKET 2490
            DA  FL      +  S  + + ++++F   G++  A+ L+ K P HI K P    V K  
Sbjct: 497  DARQFLKALTVNNHPSPTAYLHVFESFFTEGRYSEAQDLLYKCPIHIRKHP---DVTKLF 553

Query: 2491 SSDKLPSAA 2517
             S K+ SAA
Sbjct: 554  ESIKVESAA 562


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  194 bits (494), Expect = 2e-46
 Identities = 121/430 (28%), Positives = 211/430 (49%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            I+   +W N+   KL  L I +S+  V+  LK L+ +P KAL FF W    P +  ++ S
Sbjct: 201  IVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVS 260

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
              +NA+ RV       +    +I+EMK     ++  T +++  + Q +  + G+   +Y 
Sbjct: 261  --YNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQ-KSKMMGEAVKLYE 317

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K PS + C  ++  ++ +   ++     V K F   G  + K +YD +HR LT
Sbjct: 318  LMMDGPYK-PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLT 376

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
              G+F             G+ PD +TY+ L+FGLCKA+ L+EA   + E++ +G   D K
Sbjct: 377  STGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIK 436

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC+A+E   AL  F+ M+   C+    L+  L++   ++ +   A+ L+  +
Sbjct: 437  TWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIEL 496

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
              + ++ P   TY+++I  L     ++EA  +  LMK   Y  F EP  + I++ G   D
Sbjct: 497  TNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQD 556

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKETS 2493
            A  FL     K   S  + + ++ +F N G++  A+ L+ K P HI K   +  +     
Sbjct: 557  ADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAE 616

Query: 2494 SDKLPSAASS 2523
            S+   +  SS
Sbjct: 617  SNTTAATQSS 626


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  194 bits (492), Expect = 3e-46
 Identities = 124/424 (29%), Positives = 204/424 (48%), Gaps = 2/424 (0%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            I+   EW +E   +L  L I +S+  V+  LK L+  P KA +FF W  K    G    +
Sbjct: 207  IISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQS--GYEHDT 264

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            V +NA+ RV       +    +I+EMK     ++  T +++  + Q ++ +  D   +Y 
Sbjct: 265  VTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQ-RNRMMEDAVKLYE 323

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K P  + C  +++ +S N + N+D    V K +   G  + K IYD +HR LT
Sbjct: 324  LMMDGSCK-PLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLT 382

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
             AG F             G+ PD +TY+ ++FGLCK +  +EAC  + +++      D K
Sbjct: 383  SAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIK 442

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC A+E  KAL  F+ M+   C+    L+  L     S+ R   A++L+  I
Sbjct: 443  TWTILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEI 502

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
              +  ++P   TY+++I KL      +EA ++  LMK H Y  +  P    I++ G   D
Sbjct: 503  SRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMKSHNYPPYHLPFVPYISKFGSVED 562

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVI--KE 2487
            A +FL     KS  S    + ++++    G+   A+ L+ K P HI     +  +    E
Sbjct: 563  AEAFLKALSVKSYPSHIVYVQVFESLFREGRLSEAKDLLYKTPHHIRTHSKICKLFGSSE 622

Query: 2488 TSSD 2499
            T SD
Sbjct: 623  TKSD 626


>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score =  193 bits (491), Expect = 3e-46
 Identities = 119/406 (29%), Positives = 200/406 (49%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            I+   EW  E   +L  L I +S+  V+  LK L+  P K+ +FF W    P  G   ++
Sbjct: 205  IISVSEWGEEVMGELAKLKIQLSDNFVIRVLKDLRNTPLKSYKFFHWVGTQP--GYEHNT 262

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            V +NA+  V       Q    +I+E+K+    ++  T +++  + Q ++ +  D   +Y 
Sbjct: 263  VTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIKISRQLQ-KNRMMEDAVKLYE 321

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K P  + C  +++ +S + + N+D    V + +   G  + K IYD +HR LT
Sbjct: 322  HMMDGSYK-PLVQDCSLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRSLT 380

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
             AG+F             G  PD +TY+ +++GLCK +  +EAC  + E++  G   D K
Sbjct: 381  GAGKFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRRFEEACKVLEEMESCGCIPDIK 440

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HCDA+E  KAL  FS M+  +C     L+  LV    S+ R   A+++   I
Sbjct: 441  TWTILIQGHCDANELEKALLCFSKMIEKDCNPDADLLDVLVDGFFSQKRIQGAYEVFIEI 500

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
              +  ++P   TY+++I KL      +EA ++  LMK H Y  +  P    I++ G   D
Sbjct: 501  SRKCRISPWQATYKKLIEKLLEVTKFEEALELLRLMKTHNYPPYHLPFVPYISKFGSVED 560

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHI 2451
            A +FL     KS  S    + ++++    G+   A+ L+ K P HI
Sbjct: 561  AEAFLKALSAKSYPSHVVYVQVFESLFQEGRLSEAKDLLYKTPHHI 606


>ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
            gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR)
            repeat-containing protein -like [Oryza sativa Japonica
            Group] gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza
            sativa Japonica Group] gi|125573469|gb|EAZ14984.1|
            hypothetical protein OsJ_04919 [Oryza sativa Japonica
            Group] gi|215678751|dbj|BAG95188.1| unnamed protein
            product [Oryza sativa Japonica Group]
            gi|215693250|dbj|BAG88632.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 573

 Score =  193 bits (491), Expect = 3e-46
 Identities = 128/415 (30%), Positives = 206/415 (49%), Gaps = 1/415 (0%)
 Frame = +1

Query: 1243 DKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIH 1422
            D +   E +EKL  + +P++E  V   L+ ++ +P KAL FF W  +    G    SV +
Sbjct: 153  DSDASAELDEKLEGVDLPLTETAVARVLREVRDHPIKALAFFRWAGRQI--GYKHGSVSY 210

Query: 1423 NAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKV 1602
            NAMVRV   +   +    LIQEMKA    V+  T ++L  + Q +  ++ +  ++Y   +
Sbjct: 211  NAMVRVLGREESMREFWDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLT-EAVELYELMM 269

Query: 1603 EKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAG 1782
            +   K PS +    ++  ++     +++    VV+ F        K ++D +HR LT  G
Sbjct: 270  DGPYK-PSKQDGPVLIRRIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSNG 328

Query: 1783 RFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWE 1962
            RF             G  PD +TY+ LIFGLCKA   DEA  A+ E++ EG   D K W 
Sbjct: 329  RFDEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWT 388

Query: 1963 VLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQ 2142
            +LIQ HC A E  KAL+ F+ MV    E   +L+  +V  LCS  +   ++     +V++
Sbjct: 389  MLIQGHCAAGEVEKALQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFVEMVDK 448

Query: 2143 KNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYS 2322
             NL+P   TY+ +I +L     ++EA  +   MK  ++  F +P    IA+ G   DA  
Sbjct: 449  ANLSPWQGTYKHIIGELLRVKKLEEALGLLRSMKARKFPPFADPFPTHIAKYGTFDDARQ 508

Query: 2323 FL-TKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIK 2484
            FL   T      S  + + ++K+F   G++  A+ L+ K P HI K P +  + +
Sbjct: 509  FLKALTVNNKYPSPTAYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFE 563


>gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
          Length = 573

 Score =  192 bits (488), Expect = 8e-46
 Identities = 127/415 (30%), Positives = 206/415 (49%), Gaps = 1/415 (0%)
 Frame = +1

Query: 1243 DKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSSVIH 1422
            D +   E +EKL  + +P++E  V   L+ ++ +P KAL FF W  +    G    SV +
Sbjct: 153  DSDASAELDEKLEGVDLPLTETAVARVLREVRDHPIKALAFFRWAGRQI--GYKHGSVSY 210

Query: 1423 NAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYIWKV 1602
            NAMVRV   +   +    LIQEMKA    V+  T ++L  + Q +  ++ +  ++Y   +
Sbjct: 211  NAMVRVLGREESMREFWDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLT-EAVELYELMM 269

Query: 1603 EKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLTKAG 1782
            +   K PS +    ++  ++     +++    VV+ F        K ++D +HR LT  G
Sbjct: 270  DGPYK-PSKQDGPVLIRRIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSNG 328

Query: 1783 RFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHKPWE 1962
            RF             G  PD +TY+ LIFGLCKA   DEA  A+ E++ EG   D K W 
Sbjct: 329  RFDEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWT 388

Query: 1963 VLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAIVEQ 2142
            +LIQ HC A E  KAL+ F+ MV    E   +L+  +V  LCS  +   ++     +V++
Sbjct: 389  MLIQGHCAAGEVEKALQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFVEMVDK 448

Query: 2143 KNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSDAYS 2322
             NL+P   TY+ +I +L     ++EA  +   MK  ++  F +P    IA+ G   DA  
Sbjct: 449  ANLSPWQGTYKHIIGELLRVKKLEEALGLLRSMKARKFPPFADPFPTHIAKYGTFDDARQ 508

Query: 2323 FL-TKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIK 2484
            F+   T      S  + + ++K+F   G++  A+ L+ K P HI K P +  + +
Sbjct: 509  FVKALTVNNKYPSPTAYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFE 563


>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cicer arietinum]
          Length = 641

 Score =  191 bits (486), Expect = 1e-45
 Identities = 122/434 (28%), Positives = 209/434 (48%), Gaps = 1/434 (0%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            I+   EW ++ E KL+ L I +S+  V+  LK L+  P KA +FF W  K  ++    ++
Sbjct: 209  IVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNCPLKAYKFFQWVGKQSSY--QLNT 266

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            V +NA+ RV       +    +++EMK+    ++  T +++  + Q ++ +  D   +Y 
Sbjct: 267  VTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYIKISRQLQ-KNRMMEDAVKLYE 325

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K P+   C  ++  +S + + N+D    V K F   G  I K +YDS+HR LT
Sbjct: 326  LMMDSLYK-PTVVDCVVLLRTISASDKPNIDLVFRVAKKFESTGYTISKVVYDSIHRSLT 384

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
             AG+F             G+  D +TY+  IFGLCK +  +EA   + E+Q      D +
Sbjct: 385  SAGKFDEAEKMVQTMKNAGYELDNITYSQTIFGLCKFRRFEEANKVLDEMQSCNCYADKE 444

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LI+ +CDA +   AL  F+ M   +CE    L+  LV    ++ R   A+ ++  +
Sbjct: 445  TWTILIKGYCDAGQLDNALLYFAKMTEQQCEADADLLDVLVNGFLAQNRIDGAYKVLLEL 504

Query: 2134 VEQK-NLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSS 2310
                  LTP   TY+++I +L      +EA ++  +MK  +Y  + EP    I++ G   
Sbjct: 505  TTSAYRLTPRQATYKKLIDRLLGVRKFEEALELLRMMKAQKYPPYHEPFVPHISKFGTVE 564

Query: 2311 DAYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSVIKET 2490
            DA  FL     KS  S    + ++K+    G+   A+ L+ K PPHI K   +  +   +
Sbjct: 565  DAAEFLKVLSIKSYPSYTVYLKIFKSLFEEGRLSEAKDLLYKCPPHIRKHSQISELFGSS 624

Query: 2491 SSDKLPSAASSLTV 2532
             S K  S    + +
Sbjct: 625  ESQKAESQVVKIPI 638



 Score = 63.9 bits (154), Expect = 4e-07
 Identities = 75/350 (21%), Positives = 145/350 (41%), Gaps = 5/350 (1%)
 Frame = +1

Query: 1225 ISRILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQS 1404
            I  ++   +W  + E +L +    ++ E V+  LK L  NP KA  FF+W SK      S
Sbjct: 69   ILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRLDKNPEKAFSFFNWVSKKEWFMAS 128

Query: 1405 SSSVIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIAD 1584
            SS  +++ ++RV  ++   +     ++ MK K F ++  T L + V  + Q  ++ D+  
Sbjct: 129  SS--VYSLIIRVLANQETMKQFWITLRTMKEKGFYLDEETYLTISVGFKKQ-KMNSDVVA 185

Query: 1585 MYIWKVEKEKKTPSPRICYKVVECLSNNA-EANVDAAIGVVKAFRKYGGHIDKRIYDSLH 1761
            +  +     K+     +   VV  +S +  +  V+  +  +K   K   +   R+   L 
Sbjct: 186  LSHFYDGMIKQNAMQSVVTNVVGIVSGSEWDDKVENKLSELKI--KLSDNFVIRVLKELR 243

Query: 1762 RCLTKAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFK 1941
             C  KA +F            + +  + +TY  +   L K   ++E    + E++  G +
Sbjct: 244  NCPLKAYKF-----FQWVGKQSSYQLNTVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQ 298

Query: 1942 FDHKPWEVLIQAHCDASETVK-ALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHD 2118
             D   + + I      +  ++ A++L+  M+  +    P++V  +V        +    D
Sbjct: 299  LDLDTY-IKISRQLQKNRMMEDAVKLYELMM--DSLYKPTVVDCVVLLRTISASDKPNID 355

Query: 2119 LICAIV---EQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYE 2259
            L+  +    E    T S   Y  +   L  +    EA KM + MK   YE
Sbjct: 356  LVFRVAKKFESTGYTISKVVYDSIHRSLTSAGKFDEAEKMVQTMKNAGYE 405


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  186 bits (473), Expect = 4e-44
 Identities = 121/415 (29%), Positives = 202/415 (48%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            I+   EW +E    L  L I +S+  V   LK L+  P KA  FF+W  K    G    +
Sbjct: 211  IISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNCPLKAYEFFNWVGKQS--GYEHDT 268

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            V +NA+ RV  S    +    +I+EMK+    ++  T +++  + Q ++ +  D   +Y 
Sbjct: 269  VTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQ-KNKMMEDAVKLYE 327

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K PS + C  +++ +S + + N+D    V K +      + K IYD +HR L+
Sbjct: 328  LTMDGSYK-PSVKDCSLLLKSISASDDPNLDLVFRVSKKYESTWHTLSKAIYDGIHRSLS 386

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
             AG+              G+ PD +TY   IFG CK + LDEAC  + E++  GF  + K
Sbjct: 387  GAGKLDEAESIVNHMRNAGYEPDNITYNQTIFGFCKMRKLDEACKVLEEMESCGFIPEIK 446

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ HC A+E  +AL   + M+   C    +++  L+     + R  DA+ L+  I
Sbjct: 447  TWTILIQGHCVANEVDRALLCLNRMIEKGCNADAAVLGVLIGSFLGQKRIDDAYKLLVEI 506

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
            V +   +P H TY ++I  L     ++EA  +  LM+ H +    EP  + I++ G   D
Sbjct: 507  VSKHGTSPRHGTYAKLIDNLLGIGKLEEALDLHCLMRNHEFTPIIEPFVQYISKFGSIED 566

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAKSPPMLSV 2478
            A  FL   G  +  S      ++K+    G+   A+ L+SK+ P+I+K   +L +
Sbjct: 567  AIKFLKSKG--TPRSHSVYFRVFKSLLGNGRLSDAKDLLSKI-PYISKRKKILEL 618


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  186 bits (471), Expect = 7e-44
 Identities = 116/408 (28%), Positives = 196/408 (48%)
 Frame = +1

Query: 1234 ILKDKEWCNETEEKLNSLSIPISEEDVMPALKILKGNPGKALRFFSWYSKSPAHGQSSSS 1413
            ++   EW +E   +L  L I +S+  V   LK L+  P KA +FF W      +    ++
Sbjct: 210  VILGSEWGDEVMNELAELEIRLSDSFVTRVLKELQNCPLKAYKFFHWVGSQSVY--EHNT 267

Query: 1414 VIHNAMVRVACSKLHNQHLIKLIQEMKAKCFTVETHTLLRLCVRCQGQDTISGDIADMYI 1593
            V +NA+ RV       +    +++EMK+  + ++  T   + ++      I   + ++Y 
Sbjct: 268  VTYNAVARVLARPGSIKEFWSILEEMKSVRYQLDIDTYTTITMQLVKNQMIENAV-ELYE 326

Query: 1594 WKVEKEKKTPSPRICYKVVECLSNNAEANVDAAIGVVKAFRKYGGHIDKRIYDSLHRCLT 1773
              ++   K PS   C  ++  +S +   N D A  V K +   G  + K IYD +HR LT
Sbjct: 327  LMMDGSYK-PSTHDCCVLLNAISTSDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHRSLT 385

Query: 1774 KAGRFXXXXXXXXXXXXNGFMPDKLTYTHLIFGLCKAKVLDEACVAIHELQKEGFKFDHK 1953
             AG+F             GF PD +TY+ ++FGLCK K L+EA   + +++  G   D  
Sbjct: 386  SAGKFDEAEKIVKTMSNAGFEPDSVTYSQVVFGLCKMKRLEEAHKVLEDMECCGCIPDSN 445

Query: 1954 PWEVLIQAHCDASETVKALELFSYMVRGECEVAPSLVQSLVTHLCSRGREADAHDLICAI 2133
             W +LIQ +C A+E  KAL     M+   C      +  LV    S+ +  DA+  +  +
Sbjct: 446  TWSILIQGYCAANEVDKALHCLLKMIEKGCNADAGAISVLVDSWLSQEKIDDAYKFLAEM 505

Query: 2134 VEQKNLTPSHDTYQEVITKLAHSDMMKEACKMFELMKGHRYEGFEEPLYKCIARCGRSSD 2313
            V   + +P   TY++VI  L     ++EA  +  LM  H+Y  F +P+ + I++ G   D
Sbjct: 506  VRNCDASPRQPTYEKVIENLLGIGKLEEALVLLCLMWKHKYTPFTKPIVQFISKSGTVED 565

Query: 2314 AYSFLTKTGKKSDISGKSCIAMYKAFCNVGKHRRARALVSKLPPHIAK 2457
            A  FL    K + +S  + + ++++F   GK   A+ L+SK P  I +
Sbjct: 566  AEKFLKAWRKGNPVSHSAYLHVFESFIREGKLSEAKDLLSKCPSRIRR 613