BLASTX nr result
ID: Ephedra28_contig00006590
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00006590
(2028 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300170.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein... 191 1e-45
ref|XP_006850270.1| hypothetical protein AMTR_s00020p00108940 [A... 179 5e-42
ref|XP_006306689.1| hypothetical protein CARUB_v10008214mg [Caps... 172 6e-40
gb|AAL32541.1| Unknown protein [Arabidopsis thaliana] 169 5e-39
ref|NP_563719.1| ubiquitin-specific protease 2 [Arabidopsis thal... 169 5e-39
ref|XP_006418088.1| hypothetical protein EUTSA_v10006716mg [Eutr... 167 1e-38
gb|EOY05279.1| Ubiquitin carboxyl-terminal hydrolase, putative i... 163 2e-37
ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis l... 156 4e-35
ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabid... 155 6e-35
gb|ESW35835.1| hypothetical protein PHAVU_001G268800g [Phaseolus... 154 1e-34
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm... 154 1e-34
ref|XP_004296763.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 154 1e-34
ref|XP_006591431.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 152 4e-34
ref|XP_006601870.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 150 3e-33
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 148 8e-33
ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 148 1e-32
ref|XP_006365476.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 147 2e-32
ref|XP_006493055.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 147 2e-32
ref|XP_006420922.1| hypothetical protein CICLE_v10004226mg [Citr... 147 2e-32
ref|XP_004502210.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 147 2e-32
>ref|XP_002300170.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein [Populus trichocarpa]
gi|222847428|gb|EEE84975.1| UBIQUITIN-SPECIFIC PROTEASE 2
family protein [Populus trichocarpa]
Length = 925
Score = 191 bits (485), Expect = 1e-45
Identities = 163/597 (27%), Positives = 254/597 (42%), Gaps = 87/597 (14%)
Frame = +2
Query: 8 VSSTITCCDCRHSSVVFESYLDLSLPIPSRPNHQK------------------------- 112
+SST+ C +C HSS V E +LDLSLP+P++ K
Sbjct: 362 ISSTVCCVECGHSSTVHEPFLDLSLPVPTKKPPTKKVQPVSQAKKTKLPPKRGGKVQPKI 421
Query: 113 -----SMASLEASIVSANSGKKQESESKEIRNEDYAGSSGNGDCQSSSDDVAMENES--- 268
SM + S S S +++S E+ SS N S+ +E
Sbjct: 422 NRNTDSMPAQSVSKPSVQSDSPCQTQSAVPLTENTVASSDNIPAPGSTAPTTAVDERGEV 481
Query: 269 --------EKSSQESIQGANGDLAARP----LDQTNGECEAYHQESDPTRIIER------ 394
E S+++++ +A+ +D E + H + ++
Sbjct: 482 SQNLAAVIESDSKQAVETTMEQIASSFDDFWMDYIGAETTSEHDFAKENNVLAAGQQCGD 541
Query: 395 -----NNHLMDTELSVELDSLPKK-------SSFQDSSPKVIREESGLRNDCKET----Y 526
N+ L +T + +D P K + +++ P +R L KE
Sbjct: 542 KVNIPNDDLTETCQASSIDGEPNKKPESSSVNPWEEEVPLQVRSSEVLLLPYKEEGFTDR 601
Query: 527 EQALNDGDACSSVLEMKKDVSTQDC--------RLSTVERLLLDQAEKVQKPNLEKGKFR 682
E + +A SS + +D + D +S +V P+ G
Sbjct: 602 EIMKGESEAGSSFVGCGQDEAEFDGIGDLFNEPEVSAAPVAGPSLGNEVALPSFIAG-IS 660
Query: 683 RKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXXQK 856
+ P E + P++L+ CL +F +PE+L NDNAW+CE C K
Sbjct: 661 SESDPDEVDDSDSPVSLESCLALFIKPELLSNDNAWECENCSNILREQRLDA-------K 713
Query: 857 TEKSNLQKQAVGQTVNGAESCLEEESVTV--DKEIKSTSDDNTNNXXXXXXXXXXXXMFR 1030
++S + +A ++NG E+ ++ +SV + S S D T++
Sbjct: 714 NKQSKISPKA---SINGDETQIQSDSVKTLSGPPVDSCSVDETSST-------------- 756
Query: 1031 HLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDG--------TMRNATKVLRISKAPPVL 1186
G+ ++ +DG R+ATK + I KAPP+L
Sbjct: 757 --------GYTMAKDEQTDCNFPGNCESDVNEDGDKTLKKLNVKRDATKRVLIDKAPPIL 808
Query: 1187 TIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGC 1366
T+HLKRF+ D+ GRL KL+ HV+F++ LDLRPY+D RC D + +Y+L+G+VEHSGTM
Sbjct: 809 TVHLKRFSQDARGRLSKLNGHVNFRDVLDLRPYMDPRCVDTQSYVYRLLGVVEHSGTMRG 868
Query: 1367 GHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 1537
GHY+AYV R D K +D WY SD V+EV+ EVL+ +AYLLFYEK
Sbjct: 869 GHYIAYV---RGDARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEK 922
>ref|XP_006850270.1| hypothetical protein AMTR_s00020p00108940 [Amborella trichopoda]
gi|548853891|gb|ERN11851.1| hypothetical protein
AMTR_s00020p00108940 [Amborella trichopoda]
Length = 1049
Score = 179 bits (453), Expect = 5e-42
Identities = 174/647 (26%), Positives = 264/647 (40%), Gaps = 137/647 (21%)
Frame = +2
Query: 8 VSSTITCCDCRHSSVVFESYLDLSLPIPSRPNHQKSMASLEASIVSANSGKKQESESKEI 187
+SST+ C +C SS V+E +LDLSLP+P++ +K+ + + GK ES++
Sbjct: 406 LSSTLCCSECGRSSTVYEPFLDLSLPVPAKKPTKKAPIARPKKLALGRPGKASLKESRKG 465
Query: 188 RNEDYAG----------SSGNG---DCQSSSD---DVAMENESEKSSQESIQGANG---- 307
R + G S+G G +C S + ++ E + +ES++ +
Sbjct: 466 RRDQEKGNSFIGPIWNPSAGIGLSSECSEGSSVPSNPVVKEEETVAPEESVRWLDYIEDP 525
Query: 308 -----------------DLAARPLD--------QTNGECEAYHQESDPTRIIERNNHLMD 412
D P D ++ +C H + D T+ ++D
Sbjct: 526 KEDSSCVNAPEESFCWLDYIKDPKDGSSCLDASESKPKCSFSHCDGDTTKRNPETGLVVD 585
Query: 413 TELSVELDSLPKKSSFQDSS--------------PKVIREESGLRNDCKETYEQALNDGD 550
+ + PK +DSS PK+ + SG N+ + E L GD
Sbjct: 586 NRDTSSYSAEPKHEDPKDSSLEKSETNSCLPNGEPKIGCDSSGDDNEFIDDGEP-LVIGD 644
Query: 551 ACSSVLEMKKDVSTQDCRLSTVERL--------------------------------LLD 634
+ +L K+ ST++ LS + L +
Sbjct: 645 SEVLLLPYKEMDSTEEGILSDPQEPDTLLNGYGLNGDSSSVVLGCEKGADEFDGLGDLFN 704
Query: 635 QAEKVQKPNLEKGKFRRKVQ---------------PQEE---GFLPMTLDGCLTVFTRPE 760
+ E V P E G +Q QEE P++++ CL FT+PE
Sbjct: 705 EPEIVSDPKKEPGSGGNNMQFIDEFVTQDLSETEFNQEEVDNTDAPVSVEICLADFTKPE 764
Query: 761 ILCNDNAWKCEGCXXXXXXXXXXXXXXXXXQ-------KTEKSNLQKQAV----GQTVNG 907
+L + + CEGC Q ++ +S A+ + +NG
Sbjct: 765 LLTGVHGFNCEGCSKALNHNNNRETKVLEDQVNGANGSESMESEASLDALETQKSRLING 824
Query: 908 AESCL--EEESVTVDKEIKSTSDDNTNNXXXXXXXXXXXXM-----------FRHLDGGD 1048
++ L E E ++++ + + D ++N G D
Sbjct: 825 SKGSLPFEPEESSINRRLPADVSDCSSNLDKRGCNESFCAQNCDDLCSSGCDSASSRGSD 884
Query: 1049 VYGFILSSLXXXXXXXXXXXXXXXXQDGTM----RNATKVLRISKAPPVLTIHLKRFTMD 1216
S +DG M R+ TK ISKAPPVLTIHLKRF+ D
Sbjct: 885 GCNLAEKSKREKYMLSGRTKNAEKRKDGQMECFKRDGTKRFLISKAPPVLTIHLKRFSQD 944
Query: 1217 SIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVS 1396
+ GRL KL+ HV+F+E L+LRPY+D RC DKD+ LY L+G+VEHSG+M GHYVAYVR
Sbjct: 945 ARGRLSKLNGHVNFREMLELRPYMDRRCPDKDSSLYSLVGVVEHSGSMRGGHYVAYVR-- 1002
Query: 1397 RCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 1537
G D E W+ SD V V+ +EVL+SEAY+LFYEK
Sbjct: 1003 ---GPHSRDPQG-LGEYSWFYASDVNVSRVSLTEVLKSEAYILFYEK 1045
>ref|XP_006306689.1| hypothetical protein CARUB_v10008214mg [Capsella rubella]
gi|565498102|ref|XP_006306690.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
gi|482575400|gb|EOA39587.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
gi|482575401|gb|EOA39588.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
Length = 959
Score = 172 bits (435), Expect = 6e-40
Identities = 106/289 (36%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Frame = +2
Query: 677 FRRKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXX 850
F + P+E + P++++ CLT FT+PEIL +DNAW CE C
Sbjct: 687 FSSESDPEEIDDSDTPVSVERCLTHFTKPEILSDDNAWHCENCSKNLKL----------- 735
Query: 851 QKTEKSNLQKQAVGQTVNGAESCLEEESVTVDKEIKSTSDDNTNNXXXXXXXXXXXXMFR 1030
Q+ ++ K+ ++ N + L+E + EI + T+
Sbjct: 736 QRLKEKQKSKKDESRSSNSSNGWLKEN----ENEIGNGVSGETDVLAVTQETSDSCSAKD 791
Query: 1031 HLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTMRNATKVLRISKAPPVLTIHLKRFT 1210
H G LS+ R+ATK + I+KAPPVLTIHLKRF+
Sbjct: 792 HSTNGRKATSSLSANESDSKGAQDEDEDSENLITVKRDATKRVLINKAPPVLTIHLKRFS 851
Query: 1211 MDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVR 1390
D GRL KL+ HV F+E +DLR Y+DSRC+++D +Y+L G+VEHSGTM GHYVAYVR
Sbjct: 852 QDLRGRLSKLNGHVAFKEVIDLRQYMDSRCKEEDPPVYRLAGLVEHSGTMRGGHYVAYVR 911
Query: 1391 VSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 1537
G Q+ + ++ WY +SD +VR+V++ +VL SEAY+LFYE+
Sbjct: 912 -----GGQRV-KETDSSLTTWYNVSDAYVRQVSWEKVLHSEAYILFYER 954
>gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]
Length = 961
Score = 169 bits (427), Expect = 5e-39
Identities = 108/292 (36%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Frame = +2
Query: 677 FRRKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXX 850
F + P+E + LP++++ CL FT+ EIL +DNAW CE C
Sbjct: 693 FSSESDPEEIDDSDLPVSVERCLGHFTKHEILSDDNAWNCENCSKNLKLQRL-------- 744
Query: 851 QKTEKSNLQKQAVGQTVNGAESCLEEESVTVDKEIKSTSDDNTNNXXXXXXXXXXXXMFR 1030
++ KSN + T NG E+E + + D N +
Sbjct: 745 REKRKSNEDESRSSNTSNGWVKENEDEGFGETEILAVKQDPNDTSCVKD----------- 793
Query: 1031 HLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTMRNATKVLRISKAPPVLTIHLKRFT 1210
H G I S+ R+ATK + I+KAPPVLTIHLKRF+
Sbjct: 794 HSSDGRKAARIHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFS 853
Query: 1211 MDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVR 1390
D GRL KL+ HV F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYVAYVR
Sbjct: 854 QDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRGGHYVAYVR 913
Query: 1391 VSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 1546
G Q+ + ++ WY +SD +VR+V+ +VL SEAY+LFYE+ S
Sbjct: 914 -----GGQRV-KETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERIFS 959
>ref|NP_563719.1| ubiquitin-specific protease 2 [Arabidopsis thaliana]
gi|62901383|sp|Q8W4N3.2|UBP2_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=Deubiquitinating enzyme 2; Short=AtUBP2; AltName:
Full=Ubiquitin thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|7211980|gb|AAF40451.1|AC004809_9 Strong similarity to
the putative ubiquitin-specific protease F24L7.8 from A.
thaliana gi|2914695 on BAC gb|AC003974 and to ubiquitin
carboxyl-terminal hydrolase family PF|00442 and PF|00443.
ESTs gb|Z17750 and gb|Z17572 come from this gene
[Arabidopsis thaliana]
gi|11993463|gb|AAG42750.1|AF302659_1 ubiquitin-specific
protease 2 [Arabidopsis thaliana]
gi|332189631|gb|AEE27752.1| ubiquitin-specific protease 2
[Arabidopsis thaliana]
Length = 961
Score = 169 bits (427), Expect = 5e-39
Identities = 108/292 (36%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Frame = +2
Query: 677 FRRKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXX 850
F + P+E + LP++++ CL FT+ EIL +DNAW CE C
Sbjct: 693 FSSESDPEEIDDSDLPVSVERCLGHFTKHEILSDDNAWNCENCSKNLKLQRL-------- 744
Query: 851 QKTEKSNLQKQAVGQTVNGAESCLEEESVTVDKEIKSTSDDNTNNXXXXXXXXXXXXMFR 1030
++ KSN + T NG E+E + + D N +
Sbjct: 745 REKRKSNEDESRSSNTSNGWVKENEDEGFGETEILAVKQDPNDTSCVKD----------- 793
Query: 1031 HLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTMRNATKVLRISKAPPVLTIHLKRFT 1210
H G I S+ R+ATK + I+KAPPVLTIHLKRF+
Sbjct: 794 HSSDGRKAARIHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFS 853
Query: 1211 MDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVR 1390
D GRL KL+ HV F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYVAYVR
Sbjct: 854 QDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRGGHYVAYVR 913
Query: 1391 VSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 1546
G Q+ + ++ WY +SD +VR+V+ +VL SEAY+LFYE+ S
Sbjct: 914 -----GGQRV-KETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERIFS 959
>ref|XP_006418088.1| hypothetical protein EUTSA_v10006716mg [Eutrema salsugineum]
gi|557095859|gb|ESQ36441.1| hypothetical protein
EUTSA_v10006716mg [Eutrema salsugineum]
Length = 944
Score = 167 bits (424), Expect = 1e-38
Identities = 113/297 (38%), Positives = 153/297 (51%), Gaps = 7/297 (2%)
Frame = +2
Query: 677 FRRKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXX 850
F + P+E + P++++ CL FT+PEIL +DNAW CE C
Sbjct: 689 FSSESDPEEIDDSDSPVSVERCLAHFTKPEILSDDNAWNCENCSKNLKLQRLREKQKSKK 748
Query: 851 QKTEKSNLQKQAVGQTVNGAESCLEEESVTVDKEIKSTSDDN----TNNXXXXXXXXXXX 1018
++ SN V + +G EE TV + +K DN TN+
Sbjct: 749 DESRSSNTNNGWVSENEDG----FSEE--TVVQAMKQDPSDNEAMGTNSANDS------- 795
Query: 1019 XMFRHLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTMRNATKVLRISKAPPVLTIHL 1198
+ GD S R+ATK + ++KAPPVLTIHL
Sbjct: 796 ------ESGDEEAVDDSEKLVT----------------VKRDATKRVLLNKAPPVLTIHL 833
Query: 1199 KRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYV 1378
KRF+ D GRL KL+ HV F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYV
Sbjct: 834 KRFSQDLRGRLSKLNGHVAFKEFIDLRHYMDSRCNGEDPPIYRLAGLVEHSGTMRGGHYV 893
Query: 1379 AYVRVSRCDGSQKA-DSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 1546
AYVR G QKA D+D+ + WY +SD+ VR+V+ +VL SEAY+LFYE+ S
Sbjct: 894 AYVR-----GGQKAKDTDSSSV---WYHVSDSHVRQVSLEKVLHSEAYILFYERIFS 942
>gb|EOY05279.1| Ubiquitin carboxyl-terminal hydrolase, putative isoform 1 [Theobroma
cacao] gi|508713383|gb|EOY05280.1| Ubiquitin
carboxyl-terminal hydrolase, putative isoform 1
[Theobroma cacao]
Length = 1028
Score = 163 bits (413), Expect = 2e-37
Identities = 76/133 (57%), Positives = 101/133 (75%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
RNATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F+E +DLRPY+D+RC+D DNC
Sbjct: 898 RNATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFRETIDLRPYVDARCEDIDNC 957
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
+Y L+G+VEHSGTM GHY+AYVR +K ++ WY +SD +VR+V+ E
Sbjct: 958 IYHLMGVVEHSGTMRGGHYIAYVRGGE---KRKGKAETEYVSSPWYYVSDHYVRQVSLEE 1014
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 1015 VLRCEAYILFYEK 1027
>ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
gi|297338089|gb|EFH68506.1| ubiquitin-specific protease 2
[Arabidopsis lyrata subsp. lyrata]
Length = 927
Score = 156 bits (394), Expect = 4e-35
Identities = 102/295 (34%), Positives = 150/295 (50%), Gaps = 5/295 (1%)
Frame = +2
Query: 677 FRRKVQPQE--EGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXX 850
F + P+E + P++++ CL FT+PEIL +DNAW CE C
Sbjct: 659 FSSESDPEEIDDSDSPVSVERCLAHFTKPEILSDDNAWHCENCSKNLKLQRLREKQKSKK 718
Query: 851 QKTEKSNLQKQAVGQTVNGAESCLEEESVTVDKEIKST---SDDNTNNXXXXXXXXXXXX 1021
++ SN V + N +E E + + V ++ T D ++N
Sbjct: 719 DESRSSNTSNGWVKE--NESEGFGETDILAVKQDPNDTCCVKDHSSNGRKATRSHSADES 776
Query: 1022 MFRHLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTMRNATKVLRISKAPPVLTIHLK 1201
+ D + ++ R+A+K + I+KAPPVLTIHLK
Sbjct: 777 ESKGTQDEDEDSEKVITVK--------------------RDASKRVLINKAPPVLTIHLK 816
Query: 1202 RFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVA 1381
RF+ D GRL KL+ HV FQE +DL Y+D+R +D +Y+L G+VEHSGTM GHYVA
Sbjct: 817 RFSQDLRGRLSKLNGHVAFQEVIDLGQYMDTRFSGEDPPVYRLAGLVEHSGTMRGGHYVA 876
Query: 1382 YVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 1546
YVR G Q+ ++ ++ WY +SD VR+V+ +VL SEAY+LFYE+ +S
Sbjct: 877 YVR-----GGQRV-KESDSSSTVWYNVSDAHVRQVSLEKVLHSEAYILFYERIIS 925
>ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
gi|62901388|sp|Q9FPT5.2|UBP1_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 1; AltName:
Full=Deubiquitinating enzyme 1; Short=AtUBP1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|2914695|gb|AAC04485.1| ubiquitin-specific protease 1
(UBP1), putative [Arabidopsis thaliana]
gi|330253645|gb|AEC08739.1| ubiquitin carboxyl-terminal
hydrolase 1 [Arabidopsis thaliana]
Length = 1083
Score = 155 bits (392), Expect = 6e-35
Identities = 106/305 (34%), Positives = 145/305 (47%), Gaps = 26/305 (8%)
Frame = +2
Query: 701 EEGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXXQKTEKSNLQK 880
+E P+++D CL FT+ EIL DNAW CE C ++ K L
Sbjct: 793 DESDSPVSVDRCLAQFTKHEILSEDNAWHCENCSKNLKLQRLRE------KRRTKEGLSN 846
Query: 881 QAVGQTVNGAESCLEE------ESVTVD-----------------KEIKSTSDDNTNNXX 991
+ V + NGA S +E +D KE +S DD
Sbjct: 847 RWVNE--NGASSAFDECRDSSLNQSCIDLENGYKAAPPITKLPNCKEEESAIDDGFVGEE 904
Query: 992 XXXXXXXXXXMFRHLDGGDVYGFILSSLXXXXXXXXXXXXXXXXQDGTM--RNATKVLRI 1165
L GG+ +SS + + R+A K + I
Sbjct: 905 NTKQAPITSVTETPLLGGET----ISSQPASDNECENWEDLAVDSEEVIVKRDARKKVLI 960
Query: 1166 SKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVE 1345
+KAPPVLTIHLKRF+ D+ GR+ KLS HVDFQE +DL Y+D+RC ++D +Y+L G+VE
Sbjct: 961 NKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVE 1020
Query: 1346 HSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDK-WYRISDTFVREVTFSEVLQSEAYL 1522
H G M GHYV+Y+R ++ DSD WY SD+ VR + EVL+SEAY+
Sbjct: 1021 HLGAMSRGHYVSYIRGGH---KERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYI 1077
Query: 1523 LFYEK 1537
LFYE+
Sbjct: 1078 LFYER 1082
>gb|ESW35835.1| hypothetical protein PHAVU_001G268800g [Phaseolus vulgaris]
Length = 978
Score = 154 bits (390), Expect = 1e-34
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+EK+D+RPY+D RC ++
Sbjct: 849 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFREKMDIRPYIDPRCIIEEKY 908
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y+L+G+VEHSGTM GHYVAYVR G + + +N + WY+ SD +VREV+ E
Sbjct: 909 EYQLVGLVEHSGTMRGGHYVAYVR----GGHRNSGKENEGSTSTWYQASDAYVREVSLDE 964
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 965 VLRCEAYILFYEK 977
>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
gi|223542682|gb|EEF44219.1| conserved hypothetical
protein [Ricinus communis]
Length = 1006
Score = 154 bits (390), Expect = 1e-34
Identities = 73/133 (54%), Positives = 97/133 (72%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + + KAPP+LTIHLKRF+ D+ GRL KL+ HV+F + LDLRPY+D RC D++
Sbjct: 876 RDATKRVLVDKAPPILTIHLKRFSQDARGRLSKLNGHVNFGDVLDLRPYMDPRCTDREKY 935
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
+Y+L+G+VEH GTM GHYVAYVR + K ++N + WY SD +VREV+ E
Sbjct: 936 VYRLLGVVEHLGTMRGGHYVAYVRGGQ---KSKGKAENESGSSVWYHASDAYVREVSLEE 992
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 993 VLRCEAYILFYEK 1005
>ref|XP_004296763.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Fragaria
vesca subsp. vesca]
Length = 1008
Score = 154 bits (389), Expect = 1e-34
Identities = 77/133 (57%), Positives = 95/133 (71%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I +APP+LTIHLKRF+ D+ GRL KL+ HV F+EK++LRPY+DSRC++K+N
Sbjct: 878 RDATKRVLIGRAPPILTIHLKRFSQDARGRLSKLNGHVTFREKIELRPYMDSRCREKENY 937
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y LIG+VEHSGTM GHYVAYVR K + N WY SD VREV+ E
Sbjct: 938 EYHLIGVVEHSGTMRGGHYVAYVRGGE---RSKGKTGNEKIGHAWYYASDAHVREVSLEE 994
Query: 1499 VLQSEAYLLFYEK 1537
VL EAY+LFYEK
Sbjct: 995 VLHCEAYILFYEK 1007
>ref|XP_006591431.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 980
Score = 152 bits (385), Expect = 4e-34
Identities = 74/133 (55%), Positives = 99/133 (74%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+E +D+RPY+D RC +++
Sbjct: 849 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKY 908
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y L+G+VEHSGTM GHYVAYVR + + + D +N + WY+ SD +VREV+ E
Sbjct: 909 EYHLVGLVEHSGTMRGGHYVAYVRGGQRNSGKGGDKENEGS--TWYQASDAYVREVSLDE 966
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 967 VLRCEAYILFYEK 979
>ref|XP_006601870.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 980
Score = 150 bits (378), Expect = 3e-33
Identities = 75/133 (56%), Positives = 98/133 (73%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+E +D+RPY+D RC +++
Sbjct: 850 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKY 909
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y L+G+VEHSGTM GHYVAYVR + K D +N + WY+ SD +VREV+ E
Sbjct: 910 AYHLVGLVEHSGTMRGGHYVAYVRGGQ-RNCGKGDKENEGS--TWYQASDAYVREVSLDE 966
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 967 VLRCEAYILFYEK 979
>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 1070
Score = 148 bits (374), Expect = 8e-33
Identities = 71/134 (52%), Positives = 101/134 (75%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I +APPVLTIHLKRF+ D+ GRL KL+ HV+F+E +DLRPY+D RC +++
Sbjct: 939 RDATKRVLIYRAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDLRPYMDPRCINEEEY 998
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y+L+G+VEHSGTM GHYVAYVR + + + + +N ++ WY SD +VR+V+ E
Sbjct: 999 KYQLVGVVEHSGTMRGGHYVAYVRGGQRNREKVDNKENESS--TWYHASDAYVRQVSLDE 1056
Query: 1499 VLQSEAYLLFYEKD 1540
VL+ EAY+LFYE++
Sbjct: 1057 VLRCEAYILFYERN 1070
>ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Cucumis
sativus]
Length = 980
Score = 148 bits (373), Expect = 1e-32
Identities = 75/134 (55%), Positives = 92/134 (68%), Gaps = 2/134 (1%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK I KAPP+LTIH+KRF+ D+ GR KL+ HV F+E +DL+PYLD+RC D+D C
Sbjct: 850 RDATKRFLIHKAPPILTIHMKRFSPDARGRYSKLNGHVRFKETIDLKPYLDTRCADRDKC 909
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDK--WYRISDTFVREVTF 1492
Y+L+G+VEHSG+M GHYVAYVR G + S A ED WY SD V EVT
Sbjct: 910 SYRLVGVVEHSGSMRGGHYVAYVR-----GGNRKRSSGEAEEDASVWYYASDAVVDEVTL 964
Query: 1493 SEVLQSEAYLLFYE 1534
VL EAY+LFYE
Sbjct: 965 DRVLGCEAYILFYE 978
Score = 69.7 bits (169), Expect = 5e-09
Identities = 93/390 (23%), Positives = 154/390 (39%), Gaps = 63/390 (16%)
Frame = +2
Query: 5 EVSSTITCCDCRHSSVVFESYLDLSLPIPSRPNHQKSMASL----EASIVSANSGK---- 160
++SS + C +C H+S V+E +LDLSLP+P + K + + + + +GK
Sbjct: 361 QISSAVCCKECGHTSTVYEPFLDLSLPVPMKKPLAKKVQPVSRAKKTKVPPKRNGKTIPK 420
Query: 161 -KQESESKEIRNEDYAGSSGN----GDCQSSSDDVAMENES-------EKSSQESIQGAN 304
+ S+ I+ SS + +SS ME S K S + I N
Sbjct: 421 TNKVSDIVPIQIASVPSSSNESSLPSEASASSTTTIMEKTSTSQNVSDAKESGKEISVEN 480
Query: 305 GDLAARP----LDQTNGECEAYHQESDPTRIIERNNHLMDTE--------LSVELDSLPK 448
G A +D E A + + T+ E N + ++ LS+ + SL
Sbjct: 481 GGECASDNLTWMDFLEPELNADNCDISTTQDSENNIEVFISDNSQQSVSGLSMPVSSLHS 540
Query: 449 K----------SSFQDSSPKVIREESGLRNDCKE---TYEQALNDGDACSSVLEMKKDVS 589
+ +S+ D +P ++ L KE T E A D A SS+L ++
Sbjct: 541 EPNQRPDFSSVNSWNDEAPLQVQASEVLLLPYKEESSTAEVAKEDDQASSSILGCAQE-D 599
Query: 590 TQDCRLSTVERLLLDQAE----KVQKPN----LEKGKFRRKVQPQE--EGFLPMTLDGCL 739
L + D+ E + +P+ + + F + P+E P++++ CL
Sbjct: 600 FDGFGLGD----MFDEPEIPIGPIGRPSTSNEVAESSFNSESDPEEVDNTDAPVSVESCL 655
Query: 740 TVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXXQKTEKSNLQKQAVGQTVNGAE-- 913
T FT+PE+L N+N + CE C Q+ E K A NG +
Sbjct: 656 TFFTKPELLSNENGYNCEKC-----------SKRLQQQRLEMKKQSKVACKAVANGCQTA 704
Query: 914 ------SCLEEESVTVDKEIKSTSDDNTNN 985
SC E+ SV E+K+ + N N
Sbjct: 705 VGGDISSCNEDSSV----EVKNKRNMNLTN 730
>ref|XP_006365476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Solanum
tuberosum]
Length = 1010
Score = 147 bits (371), Expect = 2e-32
Identities = 74/133 (55%), Positives = 95/133 (71%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I K PP+L+IHLKRF D+ GRL KLS HV+F++ +DL+PY+D+RC KD
Sbjct: 881 RDATKRILIDKVPPILSIHLKRFRQDARGRLSKLSCHVNFRDAVDLKPYVDTRCLQKDTY 940
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y+LIG+V HSGTM GHYVAYVR G + D A + WY SDT VREV+ +
Sbjct: 941 KYQLIGVVVHSGTMRGGHYVAYVR----GGPKITGKDENAEDFVWYYASDTHVREVSLKD 996
Query: 1499 VLQSEAYLLFYEK 1537
VL+SEAY+LFYE+
Sbjct: 997 VLRSEAYILFYEE 1009
>ref|XP_006493055.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Citrus
sinensis]
Length = 1046
Score = 147 bits (370), Expect = 2e-32
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F E ++LRPY+D C D DN
Sbjct: 916 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 975
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y+L+G+VEH GTM GHYVAYVR K + + WY SD +VREV+ E
Sbjct: 976 DYRLVGVVEHLGTMRGGHYVAYVRGG---PKNKVKAKKESVGGVWYHASDVYVREVSLEE 1032
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 1033 VLRCEAYILFYEK 1045
>ref|XP_006420922.1| hypothetical protein CICLE_v10004226mg [Citrus clementina]
gi|567855607|ref|XP_006420923.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
gi|557522795|gb|ESR34162.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
gi|557522796|gb|ESR34163.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
Length = 1042
Score = 147 bits (370), Expect = 2e-32
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F E ++LRPY+D C D DN
Sbjct: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 1498
Y+L+G+VEH GTM GHYVAYVR K + + WY SD +VREV+ E
Sbjct: 972 DYRLVGVVEHLGTMRGGHYVAYVRGG---PKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Query: 1499 VLQSEAYLLFYEK 1537
VL+ EAY+LFYEK
Sbjct: 1029 VLRCEAYILFYEK 1041
>ref|XP_004502210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Cicer
arietinum]
Length = 973
Score = 147 bits (370), Expect = 2e-32
Identities = 75/135 (55%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
Frame = +2
Query: 1139 RNATKVLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 1318
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV F+E +DLRPY+D RC +++
Sbjct: 842 RDATKKVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVTFRETMDLRPYIDPRCINEEKY 901
Query: 1319 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAE-DKWYRISDTFVREVTFS 1495
Y L+G+VEHSGTM GHYVAYVR + DN E WY SD +VREV+
Sbjct: 902 EYNLVGLVEHSGTMRGGHYVAYVRGGL---RNRGKVDNKECETSTWYHASDAYVREVSLD 958
Query: 1496 EVLQSEAYLLFYEKD 1540
EVL+ EAY+LFYE++
Sbjct: 959 EVLRCEAYILFYERN 973