BLASTX nr result

ID: Ephedra28_contig00006542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006542
         (1295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26784.1| unknown [Picea sitchensis] gi|224285715|gb|ACN405...   127   8e-27

>gb|ABK26784.1| unknown [Picea sitchensis] gi|224285715|gb|ACN40573.1| unknown [Picea
            sitchensis]
          Length = 256

 Score =  127 bits (320), Expect = 8e-27
 Identities = 100/274 (36%), Positives = 144/274 (52%), Gaps = 20/274 (7%)
 Frame = -1

Query: 1106 MALRNVTNTVPQDENAEIYRGKAFLGKEV---------IERKTLSNITNTVKKTSA---T 963
            MA+R     V QDENAEI RGK+ + K V          +R TL+NITN  K  ++   +
Sbjct: 1    MAVRRQPLAVLQDENAEINRGKSTVTKSVGLKTQQPDLSDRITLANITNKPKPRNSGLVS 60

Query: 962  PVALQK-ENRQVASKGLAVNHQN-GKGLAYPLKTPLRTPLGDITNGTALKSRKTNNKASL 789
            P+A +K EN      G + +    G+    P     RT LGDITNG  ++S K  + A  
Sbjct: 61   PIAPRKAENHTKGGFGGSFSSAKIGRAGILP-----RTALGDITNG--VESCKAPDTAVK 113

Query: 788  RINKENELKNSKAGRAGSNKGELDEETKHKVDVWAREGIEKSHFTGKDIDCLRNKAAEQE 609
            R  K+ + KN K G   + + EL EE K K D WAREGIE+  F+GKD++ L+ K A++E
Sbjct: 114  R--KKVQGKNVKMGP--NPRYELTEEEKQKADAWAREGIERVQFSGKDMEALKEKIAKEE 169

Query: 608  INRNVEAVLSYKTEIPYFLPRAFEQEPLERKEKLELDDIGGLDHWPVPSYGQKASS---- 441
            +N  V   LSY+TEIP FLPRA +++     + LELD        PV    +K  S    
Sbjct: 170  VNSRVTQALSYRTEIPCFLPRALQKDSSIITDFLELD--------PVEDLCKKGDSPCDD 221

Query: 440  --YMNIDFGEEESICIDLLDAEASNWNPRVRDSI 345
                ++D+ +    C+++L   + NW   + D +
Sbjct: 222  MKLEDVDYDDSFLECLEILQNASKNWPGIMEDCV 255


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