BLASTX nr result
ID: Ephedra28_contig00006497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00006497
(433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845710.1| hypothetical protein AMTR_s00019p00240770 [A... 42 1e-06
ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi... 45 5e-06
emb|CBI17857.3| unnamed protein product [Vitis vinifera] 45 5e-06
ref|XP_002329670.1| predicted protein [Populus trichocarpa] 43 8e-06
ref|XP_006453314.1| hypothetical protein CICLE_v10007360mg [Citr... 43 8e-06
gb|EOY31934.1| Villin 4 isoform 1 [Theobroma cacao] 45 1e-05
gb|EOY31935.1| Villin 4 isoform 2 [Theobroma cacao] gi|508784680... 45 1e-05
>ref|XP_006845710.1| hypothetical protein AMTR_s00019p00240770 [Amborella trichopoda]
gi|548848282|gb|ERN07385.1| hypothetical protein
AMTR_s00019p00240770 [Amborella trichopoda]
Length = 961
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAV 259
MTK+ FYKLPKWKQNK KMA+
Sbjct: 938 MTKEGFYKLPKWKQNKQKMAL 958
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +1
Query: 16 KSNSSSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
K NS+SMSSRIEALTIQ G +YPY
Sbjct: 869 KENSNSMSSRIEALTIQEDVKEGEAEDEEGLPMYPY 904
>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
Length = 1002
Score = 45.4 bits (106), Expect(2) = 5e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
MTK AFYKLPKWKQNKLKMA++
Sbjct: 979 MTKDAFYKLPKWKQNKLKMALQ 1000
Score = 30.4 bits (67), Expect(2) = 5e-06
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 19 SNSSSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
S +MSSRIEALTI+ G IYPY
Sbjct: 911 SKEKAMSSRIEALTIEEDVKEGEAEDEEGLPIYPY 945
>emb|CBI17857.3| unnamed protein product [Vitis vinifera]
Length = 961
Score = 45.4 bits (106), Expect(2) = 5e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
MTK AFYKLPKWKQNKLKMA++
Sbjct: 938 MTKDAFYKLPKWKQNKLKMALQ 959
Score = 30.4 bits (67), Expect(2) = 5e-06
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 19 SNSSSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
S +MSSRIEALTI+ G IYPY
Sbjct: 870 SKEKAMSSRIEALTIEEDVKEGEAEDEEGLPIYPY 904
>ref|XP_002329670.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 43.1 bits (100), Expect(2) = 8e-06
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
M K AFYKLPKWKQNKLKMA++
Sbjct: 954 MAKYAFYKLPKWKQNKLKMALQ 975
Score = 32.0 bits (71), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 19 SNSSSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
S +SMSSRIE+LTIQ G IYPY
Sbjct: 886 SKENSMSSRIESLTIQEDVKEDEAEDEEGLPIYPY 920
>ref|XP_006453314.1| hypothetical protein CICLE_v10007360mg [Citrus clementina]
gi|567922618|ref|XP_006453315.1| hypothetical protein
CICLE_v10007360mg [Citrus clementina]
gi|567922620|ref|XP_006453316.1| hypothetical protein
CICLE_v10007360mg [Citrus clementina]
gi|568840527|ref|XP_006474218.1| PREDICTED: villin-4-like
isoform X1 [Citrus sinensis]
gi|568840529|ref|XP_006474219.1| PREDICTED: villin-4-like
isoform X2 [Citrus sinensis]
gi|568840531|ref|XP_006474220.1| PREDICTED: villin-4-like
isoform X3 [Citrus sinensis] gi|557556540|gb|ESR66554.1|
hypothetical protein CICLE_v10007360mg [Citrus
clementina] gi|557556541|gb|ESR66555.1| hypothetical
protein CICLE_v10007360mg [Citrus clementina]
gi|557556542|gb|ESR66556.1| hypothetical protein
CICLE_v10007360mg [Citrus clementina]
Length = 963
Score = 43.1 bits (100), Expect(2) = 8e-06
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
M K AFYKLPKWKQNKLKMA++
Sbjct: 940 MKKDAFYKLPKWKQNKLKMALQ 961
Score = 32.0 bits (71), Expect(2) = 8e-06
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 19 SNSSSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
S +SMSSRIE+LTIQ G IYPY
Sbjct: 872 SKENSMSSRIESLTIQEDVKEGEAEDEEGLPIYPY 906
>gb|EOY31934.1| Villin 4 isoform 1 [Theobroma cacao]
Length = 1024
Score = 45.4 bits (106), Expect(2) = 1e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
MTK AFYKLPKWKQNKLKMA++
Sbjct: 1001 MTKDAFYKLPKWKQNKLKMALQ 1022
Score = 29.3 bits (64), Expect(2) = 1e-05
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 28 SSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
+SMSSR+E+LTIQ G +YPY
Sbjct: 936 NSMSSRLESLTIQEDVKEGEAEDEEGLPVYPY 967
>gb|EOY31935.1| Villin 4 isoform 2 [Theobroma cacao] gi|508784680|gb|EOY31936.1|
Villin 4 isoform 2 [Theobroma cacao]
Length = 960
Score = 45.4 bits (106), Expect(2) = 1e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 197 MTKQAFYKLPKWKQNKLKMAVE 262
MTK AFYKLPKWKQNKLKMA++
Sbjct: 937 MTKDAFYKLPKWKQNKLKMALQ 958
Score = 29.3 bits (64), Expect(2) = 1e-05
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 28 SSMSSRIEALTIQXXXXXXXXXXXXGQTIYPY 123
+SMSSR+E+LTIQ G +YPY
Sbjct: 872 NSMSSRLESLTIQEDVKEGEAEDEEGLPVYPY 903