BLASTX nr result

ID: Ephedra28_contig00006446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006446
         (1391 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853603.1| hypothetical protein AMTR_s00056p00036030 [A...    68   1e-08

>ref|XP_006853603.1| hypothetical protein AMTR_s00056p00036030 [Amborella trichopoda]
            gi|548857264|gb|ERN15070.1| hypothetical protein
            AMTR_s00056p00036030 [Amborella trichopoda]
          Length = 511

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 81/374 (21%), Positives = 135/374 (36%), Gaps = 19/374 (5%)
 Frame = -2

Query: 1090 DSDGIEKAKNGTVSAGD-----VSLKQPD--ESTAKTQQSFWVDLGNASSTEPEGSLENS 932
            +  G  + K+G  + GD     +  + PD  +S +K  ++F+ DLG   + +    L   
Sbjct: 34   EEGGNHRPKDGNFTMGDFLQKGIETRGPDGNDSGSKNHENFFTDLGKRPALDSSTELHGK 93

Query: 931  TIQTQLSGHKEGWLTGENSAQNPQTSKQSETGNAEQQKQNENQPEGESEKRGMAAVTDLT 752
            +  +Q +G K+ W+T      N +   + +    + ++Q + + E E+  +    V + T
Sbjct: 94   S--SQFTGFKDSWIT------NTEGGNKRKMLFEDPKQQKKVEREAENTDKSPFGVKNST 145

Query: 751  GXXXXXXXXXXXXXXXXXXXXXXXXXXXEATXXXXXXXXXKRSVAISGADNXXXXXXXXX 572
                                                      +  +S ADN         
Sbjct: 146  --------------------------------------VSVTTEEVSSADNEATAESETE 167

Query: 571  XXXXXXXXXXTKESLKQSMIGGDQGEKK------------EIQVTILQSTNGADSKQDHN 428
                       K+ +K+ + GG    K             ++ V    S  G DS  +  
Sbjct: 168  GSSSRTLSSVEKDGIKRFIGGGSDKRKDKQGFCEPSSTDPQVPVVKQLSVLGNDSNHELG 227

Query: 427  HAPVVTSVTMTSAAMPYSYQPFSVANAPYGHTPQVTNNATVQYPTGYSLPYLTQYTMPNV 248
            + P           MPYS QP  +   PY       N+      +G  +PYL Q   P  
Sbjct: 228  NRPY---------GMPYSIQPVGIMAMPYPLPKLNPNSGPHPSGSGIPMPYLMQLMPPGS 278

Query: 247  NGAERTVVRPINSSAFQLPHNYSSFQFPTPENPPSAWXXXXXXXXXXXXXSRNVVRASME 68
            NG ER  +R ++ +  QL   YS+ Q PT E+  S W             +R  + A+ E
Sbjct: 279  NG-ERPTIRAMSPAMGQLAFGYSAVQLPTLEH-ESPWGALSQAQQFPLFGNRGGM-ANGE 335

Query: 67   HVDDQARTAQASMV 26
            HVD+  R  QA+MV
Sbjct: 336  HVDNDLRIPQAAMV 349


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