BLASTX nr result

ID: Ephedra28_contig00006338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006338
         (680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Sela...    81   3e-13

>ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
           gi|300142370|gb|EFJ09071.1| hypothetical protein
           SELMODRAFT_428350 [Selaginella moellendorffii]
          Length = 2150

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
 Frame = +2

Query: 44  KKNRSKRKDGGAKVWASARSDILQAPENEVMPEPYPPRAIVWGNYNGQNWWPAQVMKVEE 223
           KK R+ RK+GGAK+WA+A SD L A  +E   E + P ++VW       WWPA V  +E 
Sbjct: 21  KKRRNGRKNGGAKIWAAA-SDELHASNDEA--EAFEPDSLVWARIEESLWWPAFVPSLEN 77

Query: 224 FPKGTSRQ-LKGKVCVKFLGSSKGSSVPEVACLKPSEVLSYEKHDQDLIKQVFTDKREIV 400
            P    RQ  +G VCVK+  ++  +S    A L+P +++ Y        +Q+  +  E  
Sbjct: 78  LPLSVLRQKQEGWVCVKYYNNALCNSC--FAWLEPKDIVLYNGGTDIFCQQIMPESSETE 135

Query: 401 KFEAAIILAKESLKKG------TMELKKTYFRKGRG-----------SRKKETNKDNNCD 529
           KF+AA+   +ES K          EL       G              RK ++ +D    
Sbjct: 136 KFQAALAELQESYKARFSDSDVATELPAANNNVGAALEDRINLDKELLRKWKSGQDG--V 193

Query: 530 EELKTVVTDEQQDVGRKRRKQTHNPNPSFDSSTKLHSKTSPSKRAR 667
           EE  ++   E ++  RKR  +      S         + SPSKR R
Sbjct: 194 EEDGSIAGMENEEGSRKRILKLRITRSSAPHEKPTADRNSPSKRTR 239


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