BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006305
         (1038 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510553.1| zinc finger protein, putative [Ricinus commu...   122   3e-25
gb|EMJ23650.1| hypothetical protein PRUPE_ppa006185mg [Prunus pe...   117   1e-23
ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   114   5e-23
gb|ESW14746.1| hypothetical protein PHAVU_007G014100g [Phaseolus...   114   8e-23
ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   114   8e-23
ref|XP_004497245.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   113   1e-22
ref|XP_006359434.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   110   9e-22
gb|EPS63574.1| hypothetical protein M569_11208, partial [Genlise...   110   9e-22
ref|XP_004247465.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   109   2e-21
ref|XP_004291350.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   106   2e-20
ref|XP_006473675.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...    97   8e-18
ref|XP_006435197.1| hypothetical protein CICLE_v10001606mg [Citr...    97   8e-18
ref|XP_002968394.1| hypothetical protein SELMODRAFT_451322 [Sela...    97   8e-18
ref|XP_002970557.1| hypothetical protein SELMODRAFT_451325 [Sela...    97   8e-18
ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 ...    97   8e-18
ref|XP_002988229.1| hypothetical protein SELMODRAFT_451319 [Sela...    96   2e-17
ref|XP_002991361.1| hypothetical protein SELMODRAFT_429694 [Sela...    96   2e-17
ref|XP_006281909.1| hypothetical protein CARUB_v10028114mg [Caps...    93   2e-16
ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arab...    93   2e-16
emb|CBI19888.3| unnamed protein product [Vitis vinifera]               93   2e-16

>ref|XP_002510553.1| zinc finger protein, putative [Ricinus communis]
           gi|223551254|gb|EEF52740.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 358

 Score =  122 bits (305), Expect = 3e-25
 Identities = 60/90 (66%), Positives = 69/90 (76%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHRGAP 93
           R+LDW EIL GLEDN+IE  L +PE D YIGNPEDYVD AG+E LLQNLAESDD  RGAP
Sbjct: 194 RILDWAEILMGLEDNSIEFLLEVPETDRYIGNPEDYVDAAGYEALLQNLAESDDGRRGAP 253

Query: 92  PASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PASKS+V  LP+ VIT   ++    +CAIC
Sbjct: 254 PASKSSVSALPTAVIT---LEEQTRVCAIC 280


>gb|EMJ23650.1| hypothetical protein PRUPE_ppa006185mg [Prunus persica]
          Length = 423

 Score =  117 bits (292), Expect = 1e-23
 Identities = 61/91 (67%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDA-HRGA 96
           R+LDW EIL GLEDN+IE RL +PE D YIGNPEDYVD AG+E LLQ LAESD+A  RGA
Sbjct: 274 RILDWAEILMGLEDNSIEFRLEVPESDRYIGNPEDYVDAAGYEALLQTLAESDNAGRRGA 333

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PPASK+AV  LP+V I  E+    A +CAIC
Sbjct: 334 PPASKNAVSELPTVKIASED---EALVCAIC 361


>ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
          Length = 337

 Score =  114 bits (286), Expect = 5e-23
 Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESD-DAHRGA 96
           R+LDW EIL GLEDN+IE RL LPE D Y+GNPEDYVD A +E LLQ LAESD    RGA
Sbjct: 175 RILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLQTLAESDGGGRRGA 234

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PPASK+A+E LP+V I  E   S A  CAIC
Sbjct: 235 PPASKAALEALPTVKIASE---SEAVACAIC 262


>gb|ESW14746.1| hypothetical protein PHAVU_007G014100g [Phaseolus vulgaris]
          Length = 342

 Score =  114 bits (284), Expect = 8e-23
 Identities = 59/91 (64%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESD-DAHRGA 96
           R+LDW EIL GLEDN+IE RL +PE D Y+GNPEDYVD A +E LLQ LAE+D  + RGA
Sbjct: 180 RILDWAEILMGLEDNSIEFRLRVPESDRYVGNPEDYVDAAEYEALLQTLAETDGGSRRGA 239

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PPASKSAVE LP+V I  E   S   +CAIC
Sbjct: 240 PPASKSAVEALPTVKIASE---SETVVCAIC 267


>ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
           max]
          Length = 333

 Score =  114 bits (284), Expect = 8e-23
 Identities = 60/91 (65%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESD-DAHRGA 96
           R+LDW EIL GLEDN+IE RL LPE D Y+GNPEDYVD A +E LL  LAESD    RGA
Sbjct: 178 RILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLHTLAESDGGGRRGA 237

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PPASK+AVE LP+V I  E   S A  CAIC
Sbjct: 238 PPASKAAVEALPTVKIASE---SEAVACAIC 265


>ref|XP_004497245.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum]
          Length = 340

 Score =  113 bits (283), Expect = 1e-22
 Identities = 58/88 (65%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHR-GA 96
           R+LDW EIL GLEDN+IE RL  PE D Y+GNPEDYVD A +E LLQ LAESD + R GA
Sbjct: 180 RILDWAEILMGLEDNSIEFRLQAPESDRYVGNPEDYVDAAEYEALLQTLAESDGSGRGGA 239

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALC 12
           PPASKSAVE LP+V I  E+   G A+C
Sbjct: 240 PPASKSAVEALPTVKIVSESEVVGCAVC 267


>ref|XP_006359434.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Solanum
           tuberosum]
          Length = 378

 Score =  110 bits (275), Expect = 9e-22
 Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -2

Query: 317 DWNAQAGGARLESSGRVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEIL 138
           D+ A+A   R     R+LDW EIL GLED++IELR  +P+ D YIGNP DYVD AG+E L
Sbjct: 193 DFAARAANRR----NRILDWAEILMGLEDHSIELRFQVPDGDGYIGNPGDYVDAAGYEAL 248

Query: 137 LQNLAESD-DAHRGAPPASKSAVEGLPSVVITKENVDSGAALC 12
           LQ LAESD    RGAPPASKSA+EGL ++VI +E      A+C
Sbjct: 249 LQTLAESDGSGRRGAPPASKSAIEGLNTLVIKEEQEVMACAIC 291


>gb|EPS63574.1| hypothetical protein M569_11208, partial [Genlisea aurea]
          Length = 243

 Score =  110 bits (275), Expect = 9e-22
 Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDD-AHRGA 96
           R+LDW EIL GLED ++ELRL +P+ D YIGNP DYVD AG+E LLQN AESD+ A RGA
Sbjct: 101 RILDWAEILMGLEDQSVELRLQVPDSDAYIGNPGDYVDAAGYEALLQNFAESDNGARRGA 160

Query: 95  PPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           PPA+KSAVE L  V  T+++      LC+IC
Sbjct: 161 PPAAKSAVETLEDVTTTQQD---DTILCSIC 188


>ref|XP_004247465.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Solanum
           lycopersicum]
          Length = 377

 Score =  109 bits (272), Expect = 2e-21
 Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -2

Query: 317 DWNAQAGGARLESSGRVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEIL 138
           D+ A+A   R     R+LDW EIL GLED++IELRL +P+ D Y+GNP DYVD  G+E L
Sbjct: 194 DFAARAANRR----NRILDWAEILMGLEDHSIELRLQVPDGDGYVGNPGDYVDAEGYEAL 249

Query: 137 LQNLAESD-DAHRGAPPASKSAVEGLPSVVITKENVDSGAALC 12
           LQ LAESD    RGAPPASKSA+EGL ++VI +E      A+C
Sbjct: 250 LQTLAESDGGGRRGAPPASKSAIEGLNTLVIKEEQEVMACAIC 292


>ref|XP_004291350.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Fragaria vesca
           subsp. vesca]
          Length = 358

 Score =  106 bits (264), Expect = 2e-20
 Identities = 58/95 (61%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = -2

Query: 278 SGR--VLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESD-DA 108
           SGR  +LDW EIL GLEDN+IELR  +PE D Y+GNPEDYVD AG+E LLQ LAESD   
Sbjct: 198 SGRNQILDWAEILMGLEDNSIELRFEMPESDRYVGNPEDYVDAAGYEALLQTLAESDGSG 257

Query: 107 HRGAPPASKSAVEGLPSVVITKENVDSGAALCAIC 3
            RGAPPASK+AV  L +V          A +CAIC
Sbjct: 258 RRGAPPASKAAVSQLQAV--------DEAGVCAIC 284


>ref|XP_006473675.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Citrus sinensis]
          Length = 365

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 53/90 (58%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHRGAP 93
           R+LDW EIL    +N+IE RL  PE D YIGNP DY+D AG+E LLQNLAESD   RGAP
Sbjct: 207 RILDWAEIL----NNSIEFRLEAPESDRYIGNPADYMDAAGYEALLQNLAESDGGRRGAP 262

Query: 92  PASKSAVEGLPSVVITKENVDSGAALCAIC 3
            A+KSAV  LP+V I  E       +CAIC
Sbjct: 263 RAAKSAVLELPTVEILSE---QETIVCAIC 289


>ref|XP_006435197.1| hypothetical protein CICLE_v10001606mg [Citrus clementina]
           gi|557537319|gb|ESR48437.1| hypothetical protein
           CICLE_v10001606mg [Citrus clementina]
          Length = 363

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 53/90 (58%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHRGAP 93
           R+LDW EIL    +N+IE RL  PE D YIGNP DY+D AG+E LLQNLAESD   RGAP
Sbjct: 205 RILDWAEIL----NNSIEFRLEAPESDRYIGNPADYMDAAGYEALLQNLAESDGGRRGAP 260

Query: 92  PASKSAVEGLPSVVITKENVDSGAALCAIC 3
            A+KSAV  LP+V I  E       +CAIC
Sbjct: 261 RAAKSAVLELPTVEILSE---QETIVCAIC 287


>ref|XP_002968394.1| hypothetical protein SELMODRAFT_451322 [Selaginella moellendorffii]
           gi|300164038|gb|EFJ30648.1| hypothetical protein
           SELMODRAFT_451322 [Selaginella moellendorffii]
          Length = 613

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 44/84 (52%), Positives = 66/84 (78%)
 Frame = -2

Query: 254 EILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHRGAPPASKSA 75
           E+L+ L    IE+R+ +P+   Y+GNP DYVD  GFE+LLQ LAE+D++ RGAPPA+KSA
Sbjct: 296 ELLQNLVGQNIEVRVEVPQ---YVGNPGDYVDARGFELLLQQLAENDNSRRGAPPAAKSA 352

Query: 74  VEGLPSVVITKENVDSGAALCAIC 3
           V+ LP+++I + ++D G+A+CA+C
Sbjct: 353 VDTLPTILIEQAHLDDGSAVCAVC 376


>ref|XP_002970557.1| hypothetical protein SELMODRAFT_451325 [Selaginella moellendorffii]
           gi|300162073|gb|EFJ28687.1| hypothetical protein
           SELMODRAFT_451325 [Selaginella moellendorffii]
          Length = 614

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 44/84 (52%), Positives = 66/84 (78%)
 Frame = -2

Query: 254 EILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDDAHRGAPPASKSA 75
           E+L+ L    IE+R+ +P+   Y+GNP DYVD  GFE+LLQ LAE+D++ RGAPPA+KSA
Sbjct: 293 ELLQNLVGQNIEVRVEVPQ---YVGNPGDYVDARGFELLLQQLAENDNSRRGAPPAAKSA 349

Query: 74  VEGLPSVVITKENVDSGAALCAIC 3
           V+ LP+++I + ++D G+A+CA+C
Sbjct: 350 VDTLPTILIEQAHLDDGSAVCAVC 373


>ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 isoform 1 [Vitis
           vinifera] gi|359492263|ref|XP_003634390.1| PREDICTED: E3
           ubiquitin-protein ligase CIP8 isoform 2 [Vitis vinifera]
           gi|147826680|emb|CAN66109.1| hypothetical protein
           VITISV_007725 [Vitis vinifera]
          Length = 334

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 53/87 (60%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -2

Query: 269 VLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDD-AHRGAP 93
           VLDW  IL   ED+TIE    +PE + Y GNPEDYVD AG+E LLQNLAESD  A RGAP
Sbjct: 175 VLDW-AILMASEDSTIEFHFQMPEPEGYTGNPEDYVDAAGYEELLQNLAESDGAARRGAP 233

Query: 92  PASKSAVEGLPSVVITKENVDSGAALC 12
           PASKSA+  LPSV I  E      A+C
Sbjct: 234 PASKSAISALPSVEIKSEEQVLACAIC 260


>ref|XP_002988229.1| hypothetical protein SELMODRAFT_451319 [Selaginella moellendorffii]
           gi|300143961|gb|EFJ10648.1| hypothetical protein
           SELMODRAFT_451319 [Selaginella moellendorffii]
          Length = 517

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 302 AGGARLESSGRVLD-----WNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEIL 138
           +GG R E   R  +       EI + L +  +E+RL LP  D Y+GNP DY+D  GFE L
Sbjct: 230 SGGDREERVSRARNNLTFYMREIFQNLLEQNLEVRLELP--DVYLGNPGDYLDSRGFEQL 287

Query: 137 LQNLAESDDAHRGAPPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           LQ LAE+D   RGAPPA+KSAV+ L  V I + ++DSG A+CAIC
Sbjct: 288 LQQLAENDTTRRGAPPAAKSAVDELEMVKIAQHHIDSGIAVCAIC 332


>ref|XP_002991361.1| hypothetical protein SELMODRAFT_429694 [Selaginella moellendorffii]
           gi|300140754|gb|EFJ07473.1| hypothetical protein
           SELMODRAFT_429694 [Selaginella moellendorffii]
          Length = 512

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 302 AGGARLESSGRVLD-----WNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEIL 138
           +GG R E   R  +       EI + L +  +E+RL LP  D Y+GNP DY+D  GFE L
Sbjct: 225 SGGDREERVSRARNNLTFYMREIFQNLLEQNLEVRLELP--DVYLGNPGDYLDSRGFEQL 282

Query: 137 LQNLAESDDAHRGAPPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           LQ LAE+D   RGAPPA+KSAV+ L  V I + ++DSG A+CAIC
Sbjct: 283 LQQLAENDTTRRGAPPAAKSAVDELEMVKIAQHHIDSGIAVCAIC 327


>ref|XP_006281909.1| hypothetical protein CARUB_v10028114mg [Capsella rubella]
           gi|482550613|gb|EOA14807.1| hypothetical protein
           CARUB_v10028114mg [Capsella rubella]
          Length = 335

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDD-AGFEILLQNLAESD-DAHRG 99
           R+LDW EIL G+EDN++E R+   E D Y GNP DY+DD AG++ LLQNLAE D    RG
Sbjct: 173 RILDWAEILMGIEDNSVEFRM---ESDRYTGNPADYIDDAAGYDALLQNLAEGDGGGRRG 229

Query: 98  APPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           APPA+KSA+E L +  +T    +    +CA+C
Sbjct: 230 APPAAKSAIEALETFKVTSSEGEM-VMVCAVC 260


>ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
           lyrata] gi|297312476|gb|EFH42900.1| hypothetical protein
           ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
 Frame = -2

Query: 272 RVLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDD-AGFEILLQNLAESD---DAH 105
           R+LDW EIL G+EDN+IE R+   E + Y GNP DY+DD AG+E LLQNLAE D      
Sbjct: 169 RILDWAEILMGIEDNSIEFRM---ESERYTGNPADYIDDSAGYEALLQNLAEGDGGGGGR 225

Query: 104 RGAPPASKSAVEGLPSVVITKENVDSGAALCAIC 3
           RGAPPA+KSA+E L +  +T    ++   +CA+C
Sbjct: 226 RGAPPAAKSAIEALETFQVTSSEGET-VMVCAVC 258


>emb|CBI19888.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 50/75 (66%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -2

Query: 269 VLDWNEILRGLEDNTIELRLSLPEEDTYIGNPEDYVDDAGFEILLQNLAESDD-AHRGAP 93
           VLDW  IL   ED+TIE    +PE + Y GNPEDYVD AG+E LLQNLAESD  A RGAP
Sbjct: 168 VLDW-AILMASEDSTIEFHFQMPEPEGYTGNPEDYVDAAGYEELLQNLAESDGAARRGAP 226

Query: 92  PASKSAVEGLPSVVI 48
           PASKSA+  LPSV I
Sbjct: 227 PASKSAISALPSVEI 241