BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006207
         (3498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850924.1| hypothetical protein AMTR_s00025p00181800 [A...   795   0.0  
ref|XP_001767745.1| predicted protein [Physcomitrella patens] gi...   761   0.0  
ref|XP_001767679.1| predicted protein [Physcomitrella patens] gi...   747   0.0  
ref|XP_001759120.1| predicted protein [Physcomitrella patens] gi...   738   0.0  
gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella pa...   736   0.0  
ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...   728   0.0  
ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...   728   0.0  
gb|EOY26282.1| Pumilio, putative isoform 1 [Theobroma cacao]          698   0.0  
ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Popu...   689   0.0  
ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1...   684   0.0  
gb|EMJ15751.1| hypothetical protein PRUPE_ppa000898mg [Prunus pe...   683   0.0  
ref|XP_001767683.1| predicted protein [Physcomitrella patens] gi...   681   0.0  
ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4...   680   0.0  
ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Cit...   674   0.0  
gb|EOY31966.1| Pumilio 5, putative isoform 3 [Theobroma cacao]        671   0.0  
ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Cit...   670   0.0  
gb|EOY31964.1| Pumilio 5, putative isoform 1 [Theobroma cacao] g...   670   0.0  
ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|2235...   669   0.0  
gb|EMJ18811.1| hypothetical protein PRUPE_ppa016404mg, partial [...   657   0.0  
ref|XP_006453301.1| hypothetical protein CICLE_v10007330mg [Citr...   654   0.0  

>ref|XP_006850924.1| hypothetical protein AMTR_s00025p00181800 [Amborella trichopoda]
            gi|548854595|gb|ERN12505.1| hypothetical protein
            AMTR_s00025p00181800 [Amborella trichopoda]
          Length = 1003

 Score =  795 bits (2052), Expect = 0.0
 Identities = 482/1013 (47%), Positives = 603/1013 (59%), Gaps = 27/1013 (2%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTE--KGNAEGVMFGSGPLSSSCHSRN 176
            RSGSAPP+ EGS AA+G L+ +  S     W +  +  +         S P  S  ++ N
Sbjct: 59   RSGSAPPSMEGSFAAIGSLWHSQSSNTEVGWGASNDALQNYDSEEQLRSNPAYSDYYASN 118

Query: 177  --QNPRLPK-----DFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
               NPRLP      D +R  HH+GG  D R                     TH+EE EE+
Sbjct: 119  INLNPRLPPPLMSGDKRRLAHHLGGFRDNRRLMSFDDSSNVSLRNSRGVLPTHEEESEED 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSPV NL+RQ  SDW     E+FS    +SLG+R KSLVDLIQEDFPRTPSPVY+ SRSA
Sbjct: 179  RSPVGNLVRQIPSDWTGSSSEFFSEQYVNSLGARHKSLVDLIQEDFPRTPSPVYNQSRSA 238

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAG--S 680
                NE                             +GS         S   H VG+   S
Sbjct: 239  ----NE-----------------------------EGSP--------SLGAHAVGSAPSS 257

Query: 681  IDSSSLPVAVSAGEPGETKLSES------ANIAAGGSNVNPELDTVILSSANTSDASKLV 842
              S S  + V   + G    S S      + ++ G ++     D  ++ S   SD + + 
Sbjct: 258  EPSPSPDITVMTSQAGLQGDSTSEFTGLVSELSTGSAHFE---DAPLVCSRADSDVTGME 314

Query: 843  DAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQ-FQ 1019
             A +  N+S+     NL + ++   P+         +  +   QQR H    QG+     
Sbjct: 315  AALKGLNLSETHKTENLKRHQERRQPQQSN------LQQRRMHQQRTHAPISQGQATPLP 368

Query: 1020 GSAQALYQHYYQIPHN-QPKPNLSSNFIQTLPMAVQSTFQPVVSTN---PHLYATAAAAY 1187
              +Q L++ +     + Q + N SS       MA     QPVV +    PHLYA AA+AY
Sbjct: 369  PLSQGLHRQFSGFDQSFQGQTNFSSP-----NMAPTVEVQPVVQSGGVTPHLYA-AASAY 422

Query: 1188 MTSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXX 1367
            M SGNP Y N+QP+ ++APQY +G Y  N  LI P+M+GYP+ GA+P+            
Sbjct: 423  MASGNPLYHNLQPS-IYAPQYGLGAYAFNAALIPPVMAGYPSHGAIPMAFDNSGSTTFNV 481

Query: 1368 XXSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSD 1547
              S S +T G    G+DI   YKF G  G  L +   DP  MH+LQ   ED+Y+     D
Sbjct: 482  P-SASASTGGNGSPGSDI---YKFNGPLGVALPSSFPDPHYMHYLQHPSEDAYSFGAQYD 537

Query: 1548 PLSVRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSS 1721
            P   RG   GG G+  +  ++        QKSQF+RSG LG  +  R     +P++YGS 
Sbjct: 538  PNVGRG---GGFGSQRDVFESQ------SQKSQFLRSGALGGAMSPRKGGFSSPSYYGSP 588

Query: 1722 SNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQS 1901
             NM  LM Y                      R ++++ RFP+ TN+ A  GSYSGWQ   
Sbjct: 589  PNMSLLMHYPTSPLASPVYPGSPMAVTSIPGR-SNENFRFPLGTNRTA--GSYSGWQGSR 645

Query: 1902 ASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKE 2081
             ++KL D K  SFLEELK+++ RR EL +I GH+VEFS DQHGSRFIQQKLE+ +PE+KE
Sbjct: 646  INEKLDDQKAFSFLEELKSSKARR-ELPEITGHIVEFSADQHGSRFIQQKLETCSPEEKE 704

Query: 2082 LVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQ 2261
             VFQEVLPHAS LMTDVFGNYVIQKFFEHGS +QR++LA QL G++L LSLQMYGCRV+Q
Sbjct: 705  SVFQEVLPHASSLMTDVFGNYVIQKFFEHGSSEQRRKLADQLVGQVLTLSLQMYGCRVIQ 764

Query: 2262 KALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVT 2441
            KALEVVD+DQ+ QLV ELDGHVI+CVRDQNGNHVIQKCIECVPTE+IEFIISAF GQVVT
Sbjct: 765  KALEVVDLDQKTQLVQELDGHVIRCVRDQNGNHVIQKCIECVPTEKIEFIISAFRGQVVT 824

Query: 2442 LSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKER 2621
            LSTHPYGCRVIQR+LEHCT +Q+   I++EILE +C LA DQYGNYV QHVLE G P ER
Sbjct: 825  LSTHPYGCRVIQRVLEHCTNEQQTQCIVDEILESVCVLAHDQYGNYVTQHVLEKGTPHER 884

Query: 2622 SIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDP 2801
            S II KL G+VVQMSQHKFASNV+EKCLEY +  ER+ LIDE++G +E ++NL  MMKD 
Sbjct: 885  SQIISKLNGQVVQMSQHKFASNVIEKCLEYSDPAERDHLIDEIVGHTEGNDNLLIMMKDQ 944

Query: 2802 FANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEE 2960
            FANYV+QK+LETCND QR+ LL  IR + NALKKYTYGKHIVAR EKL+ + E
Sbjct: 945  FANYVVQKILETCNDQQREILLDRIRVHLNALKKYTYGKHIVARVEKLLYVGE 997


>ref|XP_001767745.1| predicted protein [Physcomitrella patens] gi|162681065|gb|EDQ67496.1|
            predicted protein [Physcomitrella patens]
          Length = 1148

 Score =  761 bits (1964), Expect = 0.0
 Identities = 481/1080 (44%), Positives = 623/1080 (57%), Gaps = 93/1080 (8%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFP---NYVSGPNSTWESQTEKG-NAEGVMFGSGPLSSSCHS 170
            RSGSAPP+ EGSLAA+GGL     ++  G  +  +S  E   +AE             +S
Sbjct: 67   RSGSAPPSVEGSLAAMGGLLDMPTSHKGGRGANVQSGEEDVLDAEEAQRADPKYLVYYYS 126

Query: 171  R-NQNPRLPKDF---------QRFGHHVG--GMGDRRMXXXXXXXXXXXXXXXXXXXXTH 314
              N NPRLP            QR    +G  G GD++                     TH
Sbjct: 127  NINLNPRLPPPLISWNNYRLAQRLQSGMGAAGFGDKKKLRSMDDSSSRSLFSSQPLLPTH 186

Query: 315  KEEPE---EERSPVSNLIRQGSSDWADR----GFEYFSGSSLGSRPKSLVDLIQEDFPRT 473
            +EEPE   E+ SP+  L R  SSDWA+R    G    S S LG RPKSLVDLIQEDFPRT
Sbjct: 187  REEPEVPEEDNSPMEALARTVSSDWAERERGDGLMGLS-SGLGPRPKSLVDLIQEDFPRT 245

Query: 474  PSPVYSLSRSAIHTANEGAD-SNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATS 650
            PSPVY LSRS+   AN+ ++ +N  ++             +       GS  +  +   S
Sbjct: 246  PSPVYHLSRSSSRAANDESEGANPVLELQLAHLRESGAGESNAGASGMGSRSTTPVPGVS 305

Query: 651  NSMHTVG---------------AGSIDSSSLPVAVSAGEPGET------KLSESANIAAG 767
            N   + G               A S+ S+S  +A   G  G +        S++ ++  G
Sbjct: 306  NLHQSSGPAAPVPRIPTPEILLASSVRSASPSLARMGGVSGLSGGNISFSSSDARSVGLG 365

Query: 768  GSNVNPELDTVILSSA-NTSDASKLVD---AFQSFNMSDMQGIN-------------NLS 896
             +  +   D   ++   N S ++   D   AFQ  +MSD+QG                  
Sbjct: 366  RAASSSAADFAQMAMPMNRSASASTADFEAAFQGLSMSDIQGSTAAREEREMQQQQQKQQ 425

Query: 897  QLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQ-HYYQIPHNQP 1073
            Q +Q +  + +      ++  Q Q Q++        + Q Q  AQA     Y Q    Q 
Sbjct: 426  QKQQQQQLQQQQEQQQARLQQQQQAQRQQQRAQIAAQAQSQAQAQAAQALAYSQAFQQQL 485

Query: 1074 KPNLSSNFIQTLPMAVQST---------FQPVVSTN---PHLYATAAAA-YMTSGNPYYQ 1214
             P + S +       V  T          QP V  N    ++YA AAAA YM   NPYY 
Sbjct: 486  YPGVDSGYRGQPKFGVGGTASQQAGAAGLQPNVGANNNPANMYAAAAAAMYMAQQNPYYP 545

Query: 1215 NIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTA 1394
            N+  AA++ PQ+ +GGY +NP +++P+M+GYP     P                 S+   
Sbjct: 546  NLNSAAVYGPQHGLGGYPVNPAMLAPMMAGYPPPVFDPATAAALA----------SMGVR 595

Query: 1395 GGI-----EMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSV 1559
            GG+     +   D+QNLYK+ G  G + Q H  DPM + ++ R+ E++   ++  DP  +
Sbjct: 596  GGVPGSPGQAAVDMQNLYKYAG--GASPQMH--DPMYLQYM-RAAEEARAAAL--DPSVL 648

Query: 1560 RGFIGGGLGNNMEFHK----ASMVGYAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSS 1721
            R ++GGG  + +E  K    A + GY+A+QKSQF R+G++GIP+ S+     +PA+YGS 
Sbjct: 649  RNYMGGGPVDMVELQKNQLSAMLGGYSAEQKSQFGRAGSMGIPIASQKSGSMSPAYYGSP 708

Query: 1722 SNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNK------IASVGSYS 1883
              +G  M Y                      R  ++++R    +         AS  +Y+
Sbjct: 709  PGVG--MPYNNSPLTSPVLPGSPVGAGSFPMRRDERNMRLSSASRTSSGNMGAASGATYA 766

Query: 1884 GWQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESA 2063
            GWQ Q   +   + + S+ LEE KN++TRRFELSDI GHVVEFS DQHGSRFIQQKLE+A
Sbjct: 767  GWQGQKTGETTEESRGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETA 826

Query: 2064 TPEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMY 2243
            T EDK +VFQEVLP A  LMTDVFGNYVIQKFFEHG+ QQR+ELA +L G++L LSLQMY
Sbjct: 827  TLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMY 886

Query: 2244 GCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAF 2423
            GCRV+QKALEVVDVDQQ QLVSELDG+V++CVRDQNGNHVIQKCIECVP  +I FIISAF
Sbjct: 887  GCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAF 946

Query: 2424 YGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEH 2603
            Y QVVTLSTHPYGCRVIQR+LEHCT++QK  GIMEEIL   C+LA+DQYGNYV QHVLEH
Sbjct: 947  YNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEH 1006

Query: 2604 GRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQ 2783
            GR  ERS II KL G++VQMSQHKFASNVVEKCLEYG   ER++LIDEMLG ++E+E LQ
Sbjct: 1007 GRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQ 1066

Query: 2784 AMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
            AMMKD FANYV+QKVLETC++ QR+ LL  IR + +ALKKYTYGKHIVAR EKL++  E+
Sbjct: 1067 AMMKDQFANYVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLVAAGER 1126


>ref|XP_001767679.1| predicted protein [Physcomitrella patens] gi|162680999|gb|EDQ67430.1|
            predicted protein [Physcomitrella patens]
          Length = 1134

 Score =  747 bits (1929), Expect = 0.0
 Identities = 474/1079 (43%), Positives = 619/1079 (57%), Gaps = 92/1079 (8%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEKG-----NAEGVMFGSGPLSSSCH 167
            RSGSAPP+ EGSLA +GG F +  + P     +  + G     +AE             +
Sbjct: 67   RSGSAPPSVEGSLATMGGFF-DMPTSPKGGRTANLQSGEEDVLDAEEAQRADPKYLIYYY 125

Query: 168  SR-NQNPRLPKDF---------QRF--GHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXT 311
            S  N NPRLP            QR   G   GG GD++                     T
Sbjct: 126  SNINLNPRLPPPLISWNNYRLAQRLQSGMGAGGFGDKKKLRSMDDSSSRSLYSSQPVLPT 185

Query: 312  HKEEP---EEERSPVSNLIRQGSSDWADR----GFEYFSGSSLGSRPKSLVDLIQEDFPR 470
            HKEEP   EE+ SP+  L R  SSDWA+R    G    S S +G RPKSLVDLIQEDFPR
Sbjct: 186  HKEEPDVPEEDNSPMGALARTVSSDWAEREKGDGLMGLS-SGMGPRPKSLVDLIQEDFPR 244

Query: 471  TPSPVYSLSRSAIHTAN-EGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISAT 647
            TPSPVY LSRS+   AN E   +N+ +D             +       GS  +  IS  
Sbjct: 245  TPSPVYHLSRSSSRAANDENEAANAVLDLQLAHLRESAARESIAVVSGMGSRSTTPISGV 304

Query: 648  SNSMHTVGAGS----IDSSSLPVA--VSAGEPGETKLSESANIAAGGSNVNP-ELDTVIL 806
            SN   T G  +    I +  +P++  V +G P   ++   + +  G  +++  E  +V+L
Sbjct: 305  SNLHQTSGPAAPVPRIPTPEIPLSSTVRSGSPNLARMGGVSGLPGGNMSISSSETRSVVL 364

Query: 807  ---SSANTSDASKLV---------------DAFQSFNMSDMQGINNLSQ---LKQHEAPE 923
               S A+ +D S++                 AF+  +MSD+ G     +   L+Q +  +
Sbjct: 365  GCASGASPADFSQIAMQLNKTASASNADFEAAFKGLSMSDIHGSTAAREGRELQQRQQQQ 424

Query: 924  GEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQH---------YYQIPHNQ-- 1070
             +     +++  Q   QQ++H    Q     Q  AQA   +         Y Q    Q  
Sbjct: 425  QQQEQQQVRLQQQ---QQQLHRQRAQIAAHAQAQAQAAQTYGMFGCQALAYSQAVQQQQF 481

Query: 1071 -----------PKPNLSSNFIQTLPMAVQSTFQPVVSTNP---HLYATAAAA-YMTSGNP 1205
                       PK  + +   Q +  A     QP +  N    ++YA AAAA YM   NP
Sbjct: 482  YAGLDSGYPGQPKFGMGTMASQQVGAA---GLQPTLGANTSPANMYAAAAAAMYMAQQNP 538

Query: 1206 YYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSV 1385
            YY N+  AA++ P Y +GGY +NP ++ P+M+GYP     P                R+ 
Sbjct: 539  YYSNMNSAAVYGPPYGLGGYPVNPAMLVPMMTGYP-----PPVFDPATATALASMGVRAG 593

Query: 1386 NTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRG 1565
                  +    +QNLYK+ G  G +   H  DP+ + ++ R+ E+S   ++  +P ++R 
Sbjct: 594  VPGSPAQATVGMQNLYKYAG--GASPPMH--DPLYLQYM-RAAEESRAAAL--EPSALRN 646

Query: 1566 FIGGGLGNNMEFHK----ASMVGYAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSSSN 1727
            ++ G   + +E  K    A + GYA  QKSQF R+G++GIP+ S+     +PA+YGS   
Sbjct: 647  YMAGAPLDVVEMQKNQLNAMLGGYAVDQKSQFGRAGSMGIPIASQKSGSVSPAYYGSPPG 706

Query: 1728 MGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNK-------IASVGSYSG 1886
            +G  M +                      R  ++++R P   ++        AS  +Y G
Sbjct: 707  VG--MPHNNSPLTSPVLPGSSVGPGTFPMRRDERNMR-PSSASRTNSGNTGAASGLTYPG 763

Query: 1887 WQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESAT 2066
            WQ Q   +   + + S+ LEE KN++TRRFELSDI GHVVEFS DQHGSRFIQQKLE+AT
Sbjct: 764  WQVQKTGETTEETRGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETAT 823

Query: 2067 PEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYG 2246
            PEDK + FQE++P A  LM+DVFGNYVIQKFFEHG+ QQR+ELA QL G +L LSLQMYG
Sbjct: 824  PEDKNMGFQEIVPRAITLMSDVFGNYVIQKFFEHGTQQQRRELASQLVGHVLVLSLQMYG 883

Query: 2247 CRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFY 2426
            CRV+QKALEVVDVDQQ QLVSELDGHV++CVRDQNGNHVIQKCIECVP  +I FIISAFY
Sbjct: 884  CRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFY 943

Query: 2427 GQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHG 2606
             QVVTLSTHPYGCRVIQR+LEHCT++QK  GIMEEIL   C+LA+DQYGNYV QHVLEHG
Sbjct: 944  NQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHG 1003

Query: 2607 RPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQA 2786
            R  ERS II KL G++VQMSQHKFASNVVEKCLEYG   ER++L+DEMLG ++E+E LQA
Sbjct: 1004 RDHERSDIITKLAGQIVQMSQHKFASNVVEKCLEYGGPAERQILVDEMLGHTDENEPLQA 1063

Query: 2787 MMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
            MMKD FANYV+QKVLETC++ QR+ LL  IR + +ALKKYTYGKHIVAR EKL++  E+
Sbjct: 1064 MMKDQFANYVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLVAAGER 1122


>ref|XP_001759120.1| predicted protein [Physcomitrella patens] gi|162689819|gb|EDQ76189.1|
            predicted protein [Physcomitrella patens]
          Length = 1119

 Score =  738 bits (1905), Expect = 0.0
 Identities = 477/1067 (44%), Positives = 608/1067 (56%), Gaps = 80/1067 (7%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLF--PNYVSGPNSTWESQTEKG--NAEGVMFGSGPLSSSCHS 170
            RSGSAPP+ EGSLAA+GG+F  P    G  S      E+   NAE             +S
Sbjct: 67   RSGSAPPSVEGSLAAMGGMFDLPTSPKGGRSPNLQPGEEDVLNAEDAQRADPRYLVYYYS 126

Query: 171  R-NQNPRLPKDF---------QRF--GHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTH 314
              N NPRLP            QR   G   GG GD++                     TH
Sbjct: 127  NINLNPRLPPPLISWNNYRLAQRLQSGMGSGGFGDKKKLRSMDDSSSRSLFSTQPVLPTH 186

Query: 315  KEEPE---EERSPVSNLIRQGSSDWADR----GFEYFSGSSLGSRPKSLVDLIQEDFPRT 473
            +EEPE   EE SP+  L R  SSDWA+R    GF   S S    R KSLVD+IQEDFPRT
Sbjct: 187  REEPEVQEEEISPMGGLARTVSSDWAERDRGDGFMGLS-SEFHPRNKSLVDMIQEDFPRT 245

Query: 474  PSPVYSLSRSAIHTAN-EGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATS 650
            PSPV+ LSRS+   AN E   +N+ +D             A       GS  +  I   S
Sbjct: 246  PSPVFHLSRSSSRAANDENEATNAVLDLQLAHLRESASGEANAVANGMGSRSTTPIPGVS 305

Query: 651  NSMHTVGAGS------IDSSSLPVAVSAGEPGETKLSESANIAAGGSNVN-PELDTVILS 809
            N     G  +          SL   V +  P   ++     ++ G  + +  +  +V L 
Sbjct: 306  NLHQASGPAAPVPRIPTPEISLSNNVRSASPSLARMGSVPGLSGGNLSFSGSDARSVGLG 365

Query: 810  SANTSDASKLVD------------------AFQSFNMSDMQ---GINNLSQLKQHEAPEG 926
             A+++ A+                      AF+  +MSDM+         ++KQ +  + 
Sbjct: 366  RASSASAADFAQFAMQLNRSASASTADFEAAFKGLSMSDMEEAIAAREGKEMKQKQQQQL 425

Query: 927  EGNSHCIQISSQHQGQQRVHLTGR-QGEVQFQGSAQAL-------YQHYYQ----IPHNQ 1070
            +      Q   Q Q +QR  +  + Q + Q   SAQ L        QH Y         Q
Sbjct: 426  Q------QQQEQQQHRQRAQIAAQVQAQAQVAQSAQTLAYSQALQQQHLYPGVDPAYRGQ 479

Query: 1071 PKPNLSSNFIQTLPMAVQSTFQPVV--STNP-HLYATAAAA-YMTSGNPYYQNIQPAALF 1238
            PK  + +   Q    A  +  QP +  +TNP ++YA AAAA YM   N YY N+ PAA++
Sbjct: 480  PKFAVGNMASQ---QAGAAGLQPNLGANTNPANMYAAAAAAMYMAQQNLYYPNMNPAAVY 536

Query: 1239 APQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGGIEMGAD 1418
             PQY +GGY +NP +++P+M+GYP     P                R+           D
Sbjct: 537  GPQYGLGGYPVNPAMLAPMMAGYPLPMFDPATAAALASMGV-----RAGVPGSSAHSAVD 591

Query: 1419 IQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGGLGNNME 1598
            IQNLYK+ G+     Q H  DPM + ++ R  E++   ++  DP  +R ++GG   + + 
Sbjct: 592  IQNLYKYAGR--ALPQIH--DPMYLQYI-RMAEEARAAAL--DPSLLRNYMGGDPLDTVN 644

Query: 1599 FHK---ASMVG-YAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSSSNMGFLMQYXXXX 1760
              K   +SM+G Y A+QKS+F R+G +G+P+ S+     +P +YGS   +     Y    
Sbjct: 645  LQKKQLSSMLGVYGAEQKSEFGRTGTMGVPITSQKSGSVSPGYYGSPPGV----PYNNSP 700

Query: 1761 XXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNK------IASVGSYSGWQSQSASDKLSD 1922
                              R  D+++R    +         AS  +Y GWQ Q  S+   +
Sbjct: 701  LTSPVLPGSPVGLGSYPIRRDDRNLRSSSTSRTSGGYMGAASGTTYGGWQGQKTSETPDE 760

Query: 1923 IKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVL 2102
             + S+ LEE KN++TRRF+L DI  HVVEFS DQHGSRFIQQKLE+ATPEDK +VFQEVL
Sbjct: 761  TRGSTLLEEFKNSKTRRFDLLDITEHVVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVL 820

Query: 2103 PHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVD 2282
            P A  LMTDVFGNYVIQKFFEHG+ QQR+ELA+QL G +L LSLQMYGCRV+QKALEVVD
Sbjct: 821  PRALTLMTDVFGNYVIQKFFEHGTQQQRRELANQLVGHVLVLSLQMYGCRVIQKALEVVD 880

Query: 2283 VDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYG 2462
            VDQQ  LVSELDGHV++CVRDQNGNHVIQKCIECVP  +I FIISAFY QVVTLSTHPYG
Sbjct: 881  VDQQTVLVSELDGHVMRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYG 940

Query: 2463 CRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKL 2642
            CRVIQR+LEHCT++QK  GIMEEIL   C+LA+DQYGNYV QHVLEHGR  ER+ II KL
Sbjct: 941  CRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKL 1000

Query: 2643 FGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQ 2822
             G++VQMSQHKFASNVVEKCLEYG   ER++LIDEMLG ++E+E LQAMMKD FANYV+Q
Sbjct: 1001 AGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQ 1060

Query: 2823 KVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
            KVLETC++ QR+ LL  IR + +ALKKYTYGKHIVAR EKL++  E+
Sbjct: 1061 KVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLVAAGER 1107


>gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
          Length = 1118

 Score =  736 bits (1901), Expect = 0.0
 Identities = 475/1067 (44%), Positives = 606/1067 (56%), Gaps = 80/1067 (7%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLF--PNYVSGPNSTWESQTEKG--NAEGVMFGSGPLSSSCHS 170
            RSGSAPP+ EGSLAA+GG+F  P    G  S      E+   NAE             +S
Sbjct: 67   RSGSAPPSVEGSLAAMGGMFDLPTSPKGGRSPNLQPGEEDVLNAEDAQRADPRYLVYYYS 126

Query: 171  R-NQNPRLPKDF---------QRF--GHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTH 314
              N NPRLP            QR   G   GG GD++                     TH
Sbjct: 127  NINLNPRLPPPLISWNNYRLAQRLQSGMGSGGFGDKKKLRSMDDSSSRSLFSTQPVLPTH 186

Query: 315  KEEPE---EERSPVSNLIRQGSSDWADR----GFEYFSGSSLGSRPKSLVDLIQEDFPRT 473
            +EEPE   EE SP+  L R  SSDWA+R    GF   S S    R KSLVD+IQEDFPRT
Sbjct: 187  REEPEVQEEEISPMGGLARTVSSDWAERDRGDGFMGLS-SEFHPRNKSLVDMIQEDFPRT 245

Query: 474  PSPVYSLSRSAIHTAN-EGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATS 650
            PSPV+ LSRS+   AN E   +N+ +D             A       GS  +  I   S
Sbjct: 246  PSPVFHLSRSSSRAANDENEATNAVLDLQLAHLRESASGEANAVANGMGSRSTTPIPGVS 305

Query: 651  NSMHTVGAGS------IDSSSLPVAVSAGEPGETKLSESANIAAGGSNVN-PELDTVILS 809
            N     G  +          SL   V +  P   ++     ++ G  + +  +  +V L 
Sbjct: 306  NLHQASGPAAPVPRIPTPEISLSNNVRSASPSLARMGSVPGLSGGNLSFSGSDARSVGLG 365

Query: 810  SANTSDASKLVD------------------AFQSFNMSDMQ---GINNLSQLKQHEAPEG 926
             A+++ A+                      AF+  +MSDM+         ++KQ +  + 
Sbjct: 366  RASSASAADFAQFAMQLNRSASASTADFEAAFKGLSMSDMEEAIAAREGKEMKQKQQQQL 425

Query: 927  EGNSHCIQISSQHQGQQRVHLTGR-QGEVQFQGSAQAL-------YQHYYQ----IPHNQ 1070
            +      Q   Q Q +QR  +  + Q + Q   SAQ L        QH Y         Q
Sbjct: 426  Q------QQQEQQQHRQRAQIAAQVQAQAQVAQSAQTLAYSQALQQQHLYPGVDPAYRGQ 479

Query: 1071 PKPNLSSNFIQTLPMAVQSTFQPVV--STNP-HLYATAAAA-YMTSGNPYYQNIQPAALF 1238
            PK  + +   Q    A  +  QP +  +TNP ++YA AAAA YM   N YY N+ PAA++
Sbjct: 480  PKFAVGNMASQ---QAGAAGLQPNLGANTNPANMYAAAAAAMYMAQQNLYYPNMNPAAVY 536

Query: 1239 APQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGGIEMGAD 1418
             PQY +GGY +NP +++P+M+GYP     P                R+           D
Sbjct: 537  GPQYGLGGYPVNPAMLAPMMAGYPLPMFDPATAAALASMGV-----RAGVPGSSAHSAVD 591

Query: 1419 IQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGGLGNNME 1598
            IQNLYK+ G+     Q H  DPM + +++ +     + +   DP  +R ++GG   + + 
Sbjct: 592  IQNLYKYAGR--ALPQIH--DPMYLQYIRMAE----STAAALDPSLLRNYMGGDPLDTVN 643

Query: 1599 FHK---ASMVG-YAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSSSNMGFLMQYXXXX 1760
              K   +SM+G Y A+QKS+F R+G +G+P+ S+     +P +YGS   +     Y    
Sbjct: 644  LQKKQLSSMLGVYGAEQKSEFGRTGTMGVPITSQKSGSVSPGYYGSPPGV----PYNNSP 699

Query: 1761 XXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNK------IASVGSYSGWQSQSASDKLSD 1922
                              R  D+++R    +         AS  +Y GWQ Q  S+   +
Sbjct: 700  LTSPVLPGSPVGLGSYPIRRDDRNLRSSSTSRTSGGYMGAASGTTYGGWQGQKTSETPDE 759

Query: 1923 IKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVL 2102
             + S+ LEE KN++TRRF+L DI  HVVEFS DQHGSRFIQQKLE+ATPEDK +VFQEVL
Sbjct: 760  TRGSTLLEEFKNSKTRRFDLLDITEHVVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVL 819

Query: 2103 PHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVD 2282
            P A  LMTDVFGNYVIQKFFEHG+ QQR+ELA+QL G +L LSLQMYGCRV+QKALEVVD
Sbjct: 820  PRALTLMTDVFGNYVIQKFFEHGTQQQRRELANQLVGHVLVLSLQMYGCRVIQKALEVVD 879

Query: 2283 VDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYG 2462
            VDQQ  LVSELDGHV++CVRDQNGNHVIQKCIECVP  +I FIISAFY QVVTLSTHPYG
Sbjct: 880  VDQQTVLVSELDGHVMRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYG 939

Query: 2463 CRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKL 2642
            CRVIQR+LEHCT++QK  GIMEEIL   C+LA+DQYGNYV QHVLEHGR  ER+ II KL
Sbjct: 940  CRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKL 999

Query: 2643 FGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQ 2822
             G++VQMSQHKFASNVVEKCLEYG   ER++LIDEMLG ++E+E LQAMMKD FANYV+Q
Sbjct: 1000 AGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQ 1059

Query: 2823 KVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
            KVLETC++ QR+ LL  IR + +ALKKYTYGKHIVAR EKL++  E+
Sbjct: 1060 KVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLVAAGER 1106


>ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
            gi|296089553|emb|CBI39372.3| unnamed protein product
            [Vitis vinifera]
          Length = 1017

 Score =  728 bits (1880), Expect = 0.0
 Identities = 449/1008 (44%), Positives = 582/1008 (57%), Gaps = 23/1008 (2%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEKGNA--------EGVMFGSGPLSS 158
            RSGSAPP+ EGS AA+     N +S  NS+  ++    N+        E +      L+ 
Sbjct: 57   RSGSAPPSMEGSFAAI----ENLMSSQNSSLNARYANLNSLIENCEPEEQLRADPAYLAY 112

Query: 159  SCHSRNQNPRLPKDF-----QRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEE 323
             C   N NPRLP        +R   H+G  G+ R                     THKEE
Sbjct: 113  YCSKINLNPRLPPPLISWENRRLVRHIGSFGNSRGLTSLDDSGGRSLRLSQGTLSTHKEE 172

Query: 324  PEEERSPVSNLIRQGSSDWADRGFEYFSGSS---LGSRPKSLVDLIQEDFPRTPSPVYSL 494
             E++RSP     ++ S DW D+   ++SG     L  + +S VDLIQ+DFPRTPSPVY+ 
Sbjct: 173  SEDDRSP-----QKPSDDWEDQSSAFWSGQDAAFLAGQHRSSVDLIQDDFPRTPSPVYNQ 227

Query: 495  SRSAIH-----TANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSM 659
            SRS IH     T    ADS+S  D                  L   S  +  I+  SNS+
Sbjct: 228  SRSLIHGSPGKTVEHDADSSSLHDSSVGTSNLVASTLV-TDNLGPSSNANPAIAPVSNSL 286

Query: 660  HTVGAGSIDSSSLPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKL 839
               G GS   S    A+   +     +    ++  GG  V+  + T   S    S+ S L
Sbjct: 287  SLDGTGSTPPSP---ALIERDAHNLDVHLEDDVLIGGITVSDFVSTE--SKMKDSNTSSL 341

Query: 840  VDAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQ 1019
             ++    N  D    N      QH+  + +GNS  +Q              G + ++ FQ
Sbjct: 342  PNSGNKKNQEDWHH-NRQKNWLQHQVHQQQGNSFQVQ--------------GAKSQMVFQ 386

Query: 1020 GSAQALYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSG 1199
            G+      ++  I  +Q     S    +  P+   S F       P LYATAAA YMTS 
Sbjct: 387  GT------NHTNINMDQYLHGSSKFSTEAQPVLQSSGF------TPPLYATAAA-YMTSA 433

Query: 1200 NPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSR 1379
            NP+Y N+QP  LF+PQYS GG+ +N  ++ P ++GYP  GA+P+              S 
Sbjct: 434  NPFYPNLQPPGLFSPQYSFGGFALNTAVLPPFVAGYPPHGAIPLAFDNTVGPSFNAQTS- 492

Query: 1380 SVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSV 1559
            +V+T   I    D+Q+L KF GQ G   Q    DP+ M + Q+   D Y+VS   DPL  
Sbjct: 493  AVSTGESITQAVDMQHLNKFYGQLGYAPQPSFADPLYMQYFQQPFGDVYSVSGQFDPLVS 552

Query: 1560 RGFIGGGLGNNMEFHKASMVGYAA-QQKSQFVRSGNL-GIPLVSRAVPNPAFYGSSSNMG 1733
            RG + G   +  E H+ S V   +  +K Q  RSG L  +      + +P ++GS +NMG
Sbjct: 553  RGGVIGSQVSAFETHRESDVASCSVDKKLQHQRSGGLTNLNHRRGGIASPNYHGSPTNMG 612

Query: 1734 FLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASDK 1913
             LMQ+                         +  IR+P  + K  +VG +SGWQ Q   D 
Sbjct: 613  MLMQFPTSPLASPVLPRSPAGVTCLPGGRNE--IRYPPGSGK--NVGIFSGWQGQRGYD- 667

Query: 1914 LSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQ 2093
              D K  SFLEELK+ + RRFELSDI GH+VEFS DQHGSRFIQQKLE+ + E+K  VF+
Sbjct: 668  --DPKTHSFLEELKSGKGRRFELSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFK 725

Query: 2094 EVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALE 2273
            EVLPHASKLMTDVFGNYVIQKFFEHG+ +QRKELA QL+G+IL LSLQMYGCRV+QKAL+
Sbjct: 726  EVLPHASKLMTDVFGNYVIQKFFEHGNPEQRKELASQLAGQILPLSLQMYGCRVIQKALD 785

Query: 2274 VVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTH 2453
            V++++Q+  LV ELDGHV++CVRDQNGNHVIQKCIE VPTE+I FIISAF   V TLSTH
Sbjct: 786  VIELEQKTLLVRELDGHVMRCVRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTH 845

Query: 2454 PYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIII 2633
            PYGCRVIQR+LEHCT++ ++  I++EILE ICSLA+DQYGNYV QHVLE G+P ERS II
Sbjct: 846  PYGCRVIQRVLEHCTDELQSQFIVDEILESICSLAQDQYGNYVTQHVLERGKPHERSQII 905

Query: 2634 QKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANY 2813
             KL G +VQ+SQHKFASNVVEKCLEYG+  ER LLI+E++G +E ++NL  MMKD FANY
Sbjct: 906  NKLKGHIVQLSQHKFASNVVEKCLEYGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANY 965

Query: 2814 VIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLE 2957
            VIQK+L+ C D QR+ L   IR +++ALKKYTYGKHIV+R E+L   E
Sbjct: 966  VIQKILDICTDNQRESLFVRIRVHAHALKKYTYGKHIVSRFEQLFGEE 1013



 Score =  115 bits (287), Expect = 2e-22
 Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
 Frame = +3

Query: 2172 SGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQN 2351
            SG+ R+     ++G I+  S   +G R +Q+ LE   V+++  +  E+  H  K + D  
Sbjct: 680  SGKGRRFELSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVF 739

Query: 2352 GNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEE 2531
            GN+VIQK  E    EQ + + S   GQ++ LS   YGCRVIQ+ L+    +QK   ++ E
Sbjct: 740  GNYVIQKFFEHGNPEQRKELASQLAGQILPLSLQMYGCRVIQKALDVIELEQKTL-LVRE 798

Query: 2532 ILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEY 2711
            +   +     DQ GN+V Q  +E    ++   II      V  +S H +   V+++ LE+
Sbjct: 799  LDGHVMRCVRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRVLEH 858

Query: 2712 GNSK-ERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENS 2888
               + + + ++DE+L      E++ ++ +D + NYV Q VLE     +R +++  ++ + 
Sbjct: 859  CTDELQSQFIVDEIL------ESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHI 912

Query: 2889 NALKKYTYGKHIVARAEKLISLEEKPL 2969
              L ++ +  ++V +  +   + E+ L
Sbjct: 913  VQLSQHKFASNVVEKCLEYGDVNERGL 939


>ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
            gi|297735758|emb|CBI18445.3| unnamed protein product
            [Vitis vinifera]
          Length = 1053

 Score =  728 bits (1878), Expect = 0.0
 Identities = 452/1014 (44%), Positives = 585/1014 (57%), Gaps = 33/1014 (3%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFP--NYVSGPNSTWESQTEKGNAEGVMFGSGP--LSSSCHS 170
            RSGSAPP+ EGS AA+G L    N +    ++  S  E   +E  +  S P   +  C +
Sbjct: 59   RSGSAPPSMEGSFAAIGNLMTQRNNLDSSLASLSSAIENSESEEQL-RSDPAYFAYYCSN 117

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ QR   H+GG G+                       THKEE E++
Sbjct: 118  VNLNPRLPPPLISRENQRLVRHIGGFGNNWRLTSFDDSGNGSLHLSRGSLSTHKEESEDD 177

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSGSSLGS---RPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP     RQ S DW +       G    S   R KSLVDLIQEDFPRTPSPVY+ SRS+
Sbjct: 178  RSP-----RQTSDDWPESSSAVMPGQKTASSAGRHKSLVDLIQEDFPRTPSPVYNQSRSS 232

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTV-----G 671
             H A E                          EL D     H IS   +S+        G
Sbjct: 233  SHAATE--------------------------ELLDLDV--HAISLNDSSLEISKLPEPG 264

Query: 672  AGSIDSSSLPVAVSAGEPG-ETKLSESANIAAGGSNVNPELDTVILSSANTSD---ASKL 839
             G++D S+    + A   G      ++AN     S  + +  ++ L    +SD   A  L
Sbjct: 265  PGTVDVSASTCTLDAPAIGLMPNKDDAANSFPSSSYSDRKHSSLPLPKDESSDKGGAGAL 324

Query: 840  VDAFQSFNMSDMQG---INNLSQL--------KQHEAPEGEGNSHCIQISSQHQGQQRVH 986
            V       +S ++     +N+S L        KQ + P  E N       +Q     +V 
Sbjct: 325  VSGGAGLEVSRVESKTKASNVSSLLVAENNANKQEQKPSYERNMPPHHPYAQQSSPYKVQ 384

Query: 987  LTGRQGEVQFQGSAQALYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLY 1166
              G Q +V  QG +   Y    ++PH  PK     + ++  PM +QS         P LY
Sbjct: 385  --GVQAQVISQGMSHP-YNGMEKLPHAPPK----FSSVEVQPM-MQSP-----GLTPPLY 431

Query: 1167 ATAAAAYMTSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXX 1346
            ATAAA Y+ SG+P+Y NIQP+ LFAPQY +GGY ++  L+   + GYP+  A+P+     
Sbjct: 432  ATAAA-YIASGSPFYPNIQPSGLFAPQYGMGGYGLSSALVPQFIGGYPSPAAIPMPFDAT 490

Query: 1347 XXXXXXXXXSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSY 1526
                      R+   + G  +  ++QNL KF G  G  LQ    DP+ M + Q   ED+Y
Sbjct: 491  SGPSFNV---RTTGASMGESIPHELQNLNKFYGHHGLMLQPSFLDPLHMQYFQHPFEDAY 547

Query: 1527 NVSMLSDPLSVRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRA-VPNP 1703
              +     L  RG IGG   +++   ++ +  Y   QK Q   +G+L +P   +  +   
Sbjct: 548  GAAGQYGRLPPRGVIGGQ-DSSVSQKESHVSAYMGDQKLQPPTNGSLSVPSPRKGGIMGS 606

Query: 1704 AFYGSSSNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYS 1883
            ++YGS  NMG + Q+                      R  +  +RFP     I +VG YS
Sbjct: 607  SYYGSPPNMGVMTQFPASPLSSPILPGSPVGGTNHPGRRNE--MRFPQ--GPIRNVGVYS 662

Query: 1884 GWQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESA 2063
            GWQ Q  +D   D K  SFLEELK+N  R+FELSDI G  VEFS DQHGSRFIQQKLE+ 
Sbjct: 663  GWQGQRGADNFEDPKKHSFLEELKSNNARKFELSDIAGRTVEFSVDQHGSRFIQQKLENC 722

Query: 2064 TPEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMY 2243
            + E+K  VF+EVLPHAS+LMTDVFGNYVIQKFFEHG+ +QR+ELA+QL+G+++ LSLQMY
Sbjct: 723  SGEEKASVFKEVLPHASRLMTDVFGNYVIQKFFEHGTPEQRRELAYQLAGQMIPLSLQMY 782

Query: 2244 GCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAF 2423
            GCRV+QKALEV+++DQ+ QLV ELDGHVI+CVRDQNGNHVIQKCIEC+PTE+I FIISAF
Sbjct: 783  GCRVIQKALEVIELDQKTQLVHELDGHVIRCVRDQNGNHVIQKCIECIPTEKIGFIISAF 842

Query: 2424 YGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEH 2603
             GQV  LS+HPYGCRVIQR+LEHC+E  ++  I++EILE    LAEDQYGNYV QHVLE 
Sbjct: 843  KGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIVDEILESAYVLAEDQYGNYVTQHVLER 902

Query: 2604 GRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQ 2783
            G P ERS II KL GK+VQMSQHK+ASNV+EKCLEYG++ E ELLI+E++G SE+++NL 
Sbjct: 903  GNPHERSQIISKLTGKIVQMSQHKYASNVIEKCLEYGSTSECELLIEEIIGQSEDNDNLL 962

Query: 2784 AMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKL 2945
             MMKD FANYV+QK+LET ND QR+ LL  IR + NALKKYTYGKHIVAR E+L
Sbjct: 963  VMMKDQFANYVVQKILETSNDKQREILLNRIRVHLNALKKYTYGKHIVARFEQL 1016



 Score =  115 bits (287), Expect = 2e-22
 Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
 Frame = +3

Query: 2172 SGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQN 2351
            S   RK     ++GR +  S+  +G R +Q+ LE    +++  +  E+  H  + + D  
Sbjct: 687  SNNARKFELSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVF 746

Query: 2352 GNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEE 2531
            GN+VIQK  E    EQ   +     GQ++ LS   YGCRVIQ+ LE    DQK   ++ E
Sbjct: 747  GNYVIQKFFEHGTPEQRRELAYQLAGQMIPLSLQMYGCRVIQKALEVIELDQKTQ-LVHE 805

Query: 2532 ILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEY 2711
            +   +     DQ GN+V Q  +E    ++   II    G+V  +S H +   V+++ LE+
Sbjct: 806  LDGHVIRCVRDQNGNHVIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEH 865

Query: 2712 GNS-KERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENS 2888
             +   + + ++DE+L      E+   + +D + NYV Q VLE  N  +R ++++ +    
Sbjct: 866  CSEVSQSQFIVDEIL------ESAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKI 919

Query: 2889 NALKKYTYGKHIVARAEKLISLEE 2960
              + ++ Y  +++ +  +  S  E
Sbjct: 920  VQMSQHKYASNVIEKCLEYGSTSE 943



 Score = 86.7 bits (213), Expect = 7e-14
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
 Frame = +3

Query: 1974 FELSDIIGHVVEFSGDQHGSRFIQQKLESATP-EDKELVFQEVLPHASKLMTDVFGNYVI 2150
            F +S   G V   S   +G R IQ+ LE  +     + +  E+L  A  L  D +GNYV 
Sbjct: 837  FIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIVDEILESAYVLAEDQYGNYVT 896

Query: 2151 QKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDG--- 2321
            Q   E G+  +R ++  +L+G+I+ +S   Y   V++K LE     +   L+ E+ G   
Sbjct: 897  QHVLERGNPHERSQIISKLTGKIVQMSQHKYASNVIEKCLEYGSTSECELLIEEIIGQSE 956

Query: 2322 ---HVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEH 2492
               +++  ++DQ  N+V+QK +E    +Q E +++     +  L  + YG  ++ R  + 
Sbjct: 957  DNDNLLVMMKDQFANYVVQKILETSNDKQREILLNRIRVHLNALKKYTYGKHIVARFEQL 1016

Query: 2493 CTE 2501
            C E
Sbjct: 1017 CCE 1019


>gb|EOY26282.1| Pumilio, putative isoform 1 [Theobroma cacao]
          Length = 1005

 Score =  698 bits (1802), Expect = 0.0
 Identities = 433/1020 (42%), Positives = 559/1020 (54%), Gaps = 35/1020 (3%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFP---NYVSGPNSTWESQTEKGNAEGVMFGSGPLSSSCHSR 173
            RSGSAPP+ EGS AALG L     N ++   ++  S  E   +E  +  S P   + +S 
Sbjct: 59   RSGSAPPSMEGSFAALGNLLAQQNNSLTSSLASLSSVIENCESEEQL-RSDPAYFAYYSS 117

Query: 174  N--QNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEE 332
            N   NPRLP     ++ +R   H+GG G+                       TH EE E+
Sbjct: 118  NINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLSTHGEESED 177

Query: 333  ERSPVSNLIRQGSSDWADRGFEYF---SGSSLGSRPKSLVDLIQEDFPRTPSPVYSLSRS 503
            +RSP     RQ S  W +           +SL  R KSLVDLIQEDFPRTPSPVYS SRS
Sbjct: 178  DRSP-----RQASDKWPEDSTVSLPEQDSASLTGRHKSLVDLIQEDFPRTPSPVYSQSRS 232

Query: 504  AIHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSI 683
            +  TA E                                 I H + A S++  ++ A  +
Sbjct: 233  SGITATE-------------------------------ETIDHDVHAISSNFPSINASEV 261

Query: 684  ------------DSSSLP----VAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSA 815
                        D+S+L       +S  +  ET +         G    P+ +   L   
Sbjct: 262  PDSNFGSTDVCMDTSALDAHTIALISQNDSLETSIPGQPCSEQTGRLPGPQKEDTSL--- 318

Query: 816  NTSDASKLVDAFQSFNMSDMQGINNLSQLKQHEAPEGEGNS-----HCIQISSQHQGQQR 980
               DAS   DA  +   S +  + +  + KQ EA +  G +       IQ  S HQ Q  
Sbjct: 319  --KDASLDADASDNVQQSVVSTVESRMRKKQ-EAQQSHGRNIPQHYSSIQPGSPHQAQG- 374

Query: 981  VHLTGRQGEVQFQGSAQALYQH-YYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNP 1157
                  QG   F      LY H  +  P +QP  + S                      P
Sbjct: 375  ---VAAQG---FSQGLSHLYSHPKFSSPESQPLLHSS-------------------GLTP 409

Query: 1158 HLYATAAAAYMTSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXX 1337
             +YAT AAAY+TSGNP+Y N QP+ ++ PQY +GGY ++P L  P M GYP+  A+P+  
Sbjct: 410  PMYAT-AAAYVTSGNPFYPNFQPSGVYGPQYDVGGYAVSPALFPPFMPGYPSHSAIPLTF 468

Query: 1338 XXXXXXXXXXXXSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVE 1517
                        +   +T       + +Q+L  F GQ G  L     DP+ M +LQ    
Sbjct: 469  DSTVSGSSFNNRTSGASTGETTPHSSGLQHLGHFYGQHGLMLPPSLVDPLHMQYLQHPFN 528

Query: 1518 DSYNVSMLSDPLSVRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRAVP 1697
            + +  S+    L+  G  GG + + ++  ++++  Y    K Q   +G+L IP   +   
Sbjct: 529  NVFGASVQRGHLASTGVTGGQVDSFVQ-KESTVAAYIGDPKLQPPINGSLSIPNPGKVGA 587

Query: 1698 NPAFYGSSSNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGS 1877
                YG   +MG + QY                      R  +  IRFP           
Sbjct: 588  TGGSYGGHPSMGVIAQYPSSPLASPLMPSSPVGGMSPLSRRNE--IRFP------PKAVP 639

Query: 1878 YSGWQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLE 2057
            YSGW  Q   +   D K  SFLEELK++  R+FE+SDI G +VEFS DQHGSRFIQQKLE
Sbjct: 640  YSGWHGQRGFNSFEDSKRHSFLEELKSSNARKFEISDIAGRIVEFSVDQHGSRFIQQKLE 699

Query: 2058 SATPEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQ 2237
              + EDKE VF+EVLPHAS+LMTDVFGNYVIQKFFEHGS +QRKELA QL G +LN SLQ
Sbjct: 700  HCSVEDKESVFKEVLPHASRLMTDVFGNYVIQKFFEHGSSEQRKELADQLVGNMLNFSLQ 759

Query: 2238 MYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIIS 2417
            MYGCRV+QKALEV+++DQ+ QLV ELDGH++KCVRDQNGNHVIQKCIECVPT +I FIIS
Sbjct: 760  MYGCRVIQKALEVIELDQKTQLVQELDGHIMKCVRDQNGNHVIQKCIECVPTYRIGFIIS 819

Query: 2418 AFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVL 2597
            AF GQV TLSTHPYGCRVIQR+LEHC+++ ++  I++EIL+    LA+DQYGNYV QHVL
Sbjct: 820  AFRGQVATLSTHPYGCRVIQRVLEHCSDEMQSQCIVDEILDAAYDLAQDQYGNYVTQHVL 879

Query: 2598 EHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHEN 2777
            E G+P ERS II KL GK+VQMSQHK+ASNVVEKCLEYG+S ERELL++E++G S+E++ 
Sbjct: 880  ERGKPHERSHIISKLTGKIVQMSQHKYASNVVEKCLEYGDSTERELLVEEIIGQSDENDT 939

Query: 2778 LQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLE 2957
            L  MMKD FANYV+QK+L+  ND QR+ LL  +R + NALKKYTYGKHI AR E+L   E
Sbjct: 940  LLTMMKDQFANYVVQKILDISNDRQREVLLGRVRVHLNALKKYTYGKHIAARFEQLFGEE 999



 Score = 84.3 bits (207), Expect = 3e-13
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
 Frame = +3

Query: 1974 FELSDIIGHVVEFSGDQHGSRFIQQKLESATPE-DKELVFQEVLPHASKLMTDVFGNYVI 2150
            F +S   G V   S   +G R IQ+ LE  + E   + +  E+L  A  L  D +GNYV 
Sbjct: 816  FIISAFRGQVATLSTHPYGCRVIQRVLEHCSDEMQSQCIVDEILDAAYDLAQDQYGNYVT 875

Query: 2151 QKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGH-- 2324
            Q   E G   +R  +  +L+G+I+ +S   Y   VV+K LE  D  ++  LV E+ G   
Sbjct: 876  QHVLERGKPHERSHIISKLTGKIVQMSQHKYASNVVEKCLEYGDSTERELLVEEIIGQSD 935

Query: 2325 ----VIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEH 2492
                ++  ++DQ  N+V+QK ++     Q E ++      +  L  + YG  +  R  + 
Sbjct: 936  ENDTLLTMMKDQFANYVVQKILDISNDRQREVLLGRVRVHLNALKKYTYGKHIAARFEQL 995

Query: 2493 CTEDQKNNG 2519
              E+   +G
Sbjct: 996  FGEESDESG 1004


>ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Populus trichocarpa]
            gi|550332073|gb|EEE89263.2| hypothetical protein
            POPTR_0008s00490g [Populus trichocarpa]
          Length = 992

 Score =  689 bits (1779), Expect = 0.0
 Identities = 433/996 (43%), Positives = 565/996 (56%), Gaps = 15/996 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK----GNAEGVMFGSGPLSSSCHS 170
            RSGSAPP+ EGS AA+G L   + SG +S+ ES         + E +       +  C +
Sbjct: 59   RSGSAPPSMEGSFAAIGNLLAQHNSGMSSSLESLGSVIENCESEEQLRSDPAYFAYYCSN 118

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ +R  HH+GG G+                       THKEEP E+
Sbjct: 119  VNLNPRLPPPLLSRENRRLVHHIGGFGNN----WRPESGNGSLQLPKSSLSTHKEEPNED 174

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP      +G+S+       Y SG   +SL  R KSLVDLIQEDFPRTPSPVYS SRS+
Sbjct: 175  RSP------RGASE---NSGVYISGQNTTSLAGRHKSLVDLIQEDFPRTPSPVYSQSRSS 225

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEIS-HTISATSNSMHTVGAGSI 683
             H A  G D     D             +K++E   GS++   T +   +++  V     
Sbjct: 226  SHAAEVGIDH----DVHAISSNVSSASMSKISESNAGSDVCVDTYALEVDALRLVSINDP 281

Query: 684  DSSSLPVA-VSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSF 860
             S+ LP +   AG P + K  ES+    G      E+D  I  S  +  A       ++ 
Sbjct: 282  PSADLPTSPCRAGTPTQQK-GESSTKGTGF-----EVDASIRGSRQSGSARM---ELRTK 332

Query: 861  NMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALY 1040
            N  D Q       + QH +   +G  H +Q+ SQ  G    H            S+    
Sbjct: 333  NKQDQQTYGR--NIPQHHSHSQQGIPHQVQVISQ--GTNPSH------------SSMGKP 376

Query: 1041 QHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGNPYYQNI 1220
             H Y        P  SS  + T      S+  P +  NP  YA   A YMT+G P+YQ  
Sbjct: 377  SHGY--------PKFSSTEVLT------SSHSPAM--NPPFYAPQGA-YMTAGTPFYQ-- 417

Query: 1221 QPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGG 1400
             P++++ PQY++GGY +    ISP M G+P+   +PV              +     A  
Sbjct: 418  -PSSVYPPQYNMGGYAVGSAFISPYMPGFPSHSTIPVSFGGAPGPSNDGRTA----DASA 472

Query: 1401 IEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGG 1580
            ++    +Q+L KF GQ G  LQ    DP+     Q    D Y+ +   + L+  G  G  
Sbjct: 473  VQQIGSLQHLAKFYGQHGLMLQPSFVDPLHAQLFQHPFGDVYSATP-HNRLASSGTTGPQ 531

Query: 1581 LGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSR-AVPNPAFYGSSSNMGFLMQYXXX 1757
            + + +     +   + A QK     +G L IP+  +  +   ++YG   +MG +  +   
Sbjct: 532  IDSFIPQKDLAAAAHMANQKVLTSTNGGLSIPVPGKIGISGGSYYGGPPSMGVITHFPAS 591

Query: 1758 XXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASDKLSDIKCSS 1937
                               R TD  +RFP  +N+ A  G Y   Q Q A +   D K   
Sbjct: 592  PLTSPVLPSSPVGGVNHLSRRTD--LRFPQGSNRNA--GLYFRGQEQRAVNSADDPKRHY 647

Query: 1938 FLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPHASK 2117
            FLEELK+N  R+FELSD+ G +VEFS DQHGSRFIQQKLE+   E+KE VF+EVLPHA K
Sbjct: 648  FLEELKSNNARKFELSDVAGRIVEFSVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPK 707

Query: 2118 LMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQM 2297
            LMTDVFGNYVIQKFFEHGS +QR ELA +LSG+IL LSLQMYGCRV+QKALEV+++DQ+ 
Sbjct: 708  LMTDVFGNYVIQKFFEHGSPEQRMELAEKLSGQILQLSLQMYGCRVIQKALEVIELDQKA 767

Query: 2298 QLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQ 2477
            +L  ELDGHV++CV DQNGNHVIQKCIECVP E IEFIISAF GQVVTLSTHPYGCRVIQ
Sbjct: 768  KLAQELDGHVMRCVHDQNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQ 827

Query: 2478 RILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVV 2657
            R+LEHC+++ ++  I++EILE    LA+DQYGNYV QHVLE G+P ERS II KL GK+V
Sbjct: 828  RVLEHCSDELQSQCIVDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIV 887

Query: 2658 QMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLET 2837
            QMSQHK+ASNVVEKCL++ ++ EREL+I E++G SEE++NL  MMKD FANYV+QK+LET
Sbjct: 888  QMSQHKYASNVVEKCLKHADAAERELMIGEIIGQSEENDNLLIMMKDQFANYVVQKILET 947

Query: 2838 CNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKL 2945
             ND Q++ LL+ I  + NALKKYTYGKHIVAR E+L
Sbjct: 948  SNDKQKEILLSRINAHLNALKKYTYGKHIVARFEQL 983



 Score =  121 bits (304), Expect = 2e-24
 Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 1/319 (0%)
 Frame = +3

Query: 2016 GDQHGSRFIQQKLESATPEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKEL 2195
            G  H SR    +    +  +  L F+     A     D   +Y ++   E  S   RK  
Sbjct: 605  GVNHLSRRTDLRFPQGSNRNAGLYFRGQEQRAVNSADDPKRHYFLE---ELKSNNARKFE 661

Query: 2196 AHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKC 2375
               ++GRI+  S+  +G R +Q+ LE  +V+++  +  E+  H  K + D  GN+VIQK 
Sbjct: 662  LSDVAGRIVEFSVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKF 721

Query: 2376 IECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSL 2555
             E    EQ   +     GQ++ LS   YGCRVIQ+ LE    DQK   + +E+   +   
Sbjct: 722  FEHGSPEQRMELAEKLSGQILQLSLQMYGCRVIQKALEVIELDQKAK-LAQELDGHVMRC 780

Query: 2556 AEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSK-ERE 2732
              DQ GN+V Q  +E    +    II    G+VV +S H +   V+++ LE+ + + + +
Sbjct: 781  VHDQNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQ 840

Query: 2733 LLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTY 2912
             ++DE+L      E+   + +D + NYV Q VLE     +R ++++ +      + ++ Y
Sbjct: 841  CIVDEIL------ESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKY 894

Query: 2913 GKHIVARAEKLISLEEKPL 2969
              ++V +  K     E+ L
Sbjct: 895  ASNVVEKCLKHADAAEREL 913



 Score = 93.2 bits (230), Expect = 7e-16
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
 Frame = +3

Query: 1974 FELSDIIGHVVEFSGDQHGSRFIQQKLESATPE-DKELVFQEVLPHASKLMTDVFGNYVI 2150
            F +S   G VV  S   +G R IQ+ LE  + E   + +  E+L  +  L  D +GNYV 
Sbjct: 804  FIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESSYLLAQDQYGNYVT 863

Query: 2151 QKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDG--- 2321
            Q   E G   +R ++  +L+G+I+ +S   Y   VV+K L+  D  ++  ++ E+ G   
Sbjct: 864  QHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHADAAERELMIGEIIGQSE 923

Query: 2322 ---HVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEH 2492
               +++  ++DQ  N+V+QK +E    +Q E ++S     +  L  + YG  ++ R  + 
Sbjct: 924  ENDNLLIMMKDQFANYVVQKILETSNDKQKEILLSRINAHLNALKKYTYGKHIVARFEQL 983

Query: 2493 CTEDQ 2507
            C E Q
Sbjct: 984  CVEGQ 988


>ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1 [Citrus sinensis]
            gi|568827490|ref|XP_006468091.1| PREDICTED: pumilio
            homolog 5-like isoform X2 [Citrus sinensis]
            gi|568827492|ref|XP_006468092.1| PREDICTED: pumilio
            homolog 5-like isoform X3 [Citrus sinensis]
          Length = 1019

 Score =  684 bits (1766), Expect = 0.0
 Identities = 434/1008 (43%), Positives = 571/1008 (56%), Gaps = 18/1008 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAEGV-MFGSGP--LSSSCHS 170
            RSGSAPP+ EGS+AA+G L   + S  N++ ES +   GN E      S P   +  C +
Sbjct: 59   RSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYESEEQLRSHPAYFAYYCSN 118

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ +R   H+G  G                        TH+EEPEE+
Sbjct: 119  VNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSNSVDDVGNGTLHLSRSSLSTHEEEPEED 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP     RQ S + ++    +F G   +SL  R KSLVDLIQEDFPRTPSPV++ SRS+
Sbjct: 179  RSP-----RQASENLSEISSAFFPGQKSTSLVGRHKSLVDLIQEDFPRTPSPVFNQSRSS 233

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSID 686
             H   E  D +                   ++       IS T  A  ++   V    +D
Sbjct: 234  SHATEELIDLDVHA----------------ISLDVSSMNISETPEANGSADVHVDPCVMD 277

Query: 687  SSSLPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSFNM 866
               + + +S   P     S S       ++ NP +D     +A   D + +  A QS   
Sbjct: 278  PQDIAL-ISNNGPAAVSFSSSPCPDGTETSRNPRIDDTNSKNAGLEDVASVSAASQS--- 333

Query: 867  SDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQH 1046
             D+    +  + KQ E  + +G     Q  S  QG Q   + G QG+    G   A    
Sbjct: 334  -DVSRAESRMRKKQEEQ-KYQGRIMMQQYPSAQQGFQ-YQVQGVQGQAVSLGMNNA---- 386

Query: 1047 YYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGNPYYQNIQP 1226
                 HN    N   +   +   A  S   P ++  P LYA+A   YM SGNP+Y + QP
Sbjct: 387  -----HNGMDKNSYGHGKFSSFEAQPSMNSPGLT--PPLYASAGT-YMASGNPFYPSFQP 438

Query: 1227 --AALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGG 1400
              A ++  QY++GGY +N  L  P ++GYP+QG +P+              + SV+T  G
Sbjct: 439  SGAGVYPSQYNVGGYALNSALFPPFVAGYPSQGPVPMPFDATSGSSFNIRTT-SVSTGEG 497

Query: 1401 IEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGG 1580
            I      Q+  KF G  G  LQ+   DP+ M + Q    D+YN S+    L+  G + G 
Sbjct: 498  IPHIGSTQH-QKFYGHQGLMLQSPFVDPLHMQYFQHPFGDAYNASV-QHRLASSG-VNGA 554

Query: 1581 LGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRA-VPNPAFYGSSSNMGFLMQYXXX 1757
            L +     +  +  Y   Q  Q   +G   I    +  +P   +YG    MG + Q+   
Sbjct: 555  LADPSSKKEPIVAAYMGDQNLQSSLNGGPSISNPRKVGMPVGGYYGGLPGMGVMGQFPTS 614

Query: 1758 XXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASD---KLSDIK 1928
                                     +R P   N+  + G YSGWQ Q   +      D K
Sbjct: 615  PIASPVLPSSPVGSTSQLG--LRHEMRLPQGLNR--NTGIYSGWQGQRTFEGQRTFEDSK 670

Query: 1929 CSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPH 2108
              SFLEELK++  ++FELSDI G +VEFS DQHGSRFIQQKLE  + E+K  VF+EVLPH
Sbjct: 671  KHSFLEELKSSNAQKFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVSVFKEVLPH 730

Query: 2109 ASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVD 2288
            ASKLMTDVFGNYVIQKFFEHGS  QRKEL+ +L G++L LSLQMYGCRV+QKALEV+++ 
Sbjct: 731  ASKLMTDVFGNYVIQKFFEHGSPDQRKELSEKLVGQVLPLSLQMYGCRVIQKALEVIELH 790

Query: 2289 QQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCR 2468
            Q+ QLV ELDGHV++CVRDQNGNHVIQKC+ECVP E+IEFIISAF GQV TLSTHPYGCR
Sbjct: 791  QKSQLVLELDGHVMRCVRDQNGNHVIQKCVECVPAEKIEFIISAFRGQVATLSTHPYGCR 850

Query: 2469 VIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFG 2648
            VIQR+LEHC+++Q+   I++EILE   +LA+DQYGNYV QHVLE G+P ER+ I+ KL G
Sbjct: 851  VIQRVLEHCSDEQQGQCIVDEILESAFALAQDQYGNYVTQHVLERGKPYERTQILSKLAG 910

Query: 2649 KVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKV 2828
            K+VQMSQHK+ASNVVEKCLEYG++ ERELLI+E+LG SEE++NL  MMKD +ANYV+QK+
Sbjct: 911  KIVQMSQHKYASNVVEKCLEYGDTAERELLIEEILGQSEENDNLLVMMKDQYANYVVQKI 970

Query: 2829 LETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEKPLE 2972
            LE CN+  R+ L++ IR + +ALKKYTYGKHIVAR E+L   E +P E
Sbjct: 971  LEKCNEKLRETLISRIRVHCDALKKYTYGKHIVARFEQLYGEESQPSE 1018


>gb|EMJ15751.1| hypothetical protein PRUPE_ppa000898mg [Prunus persica]
          Length = 967

 Score =  683 bits (1762), Expect = 0.0
 Identities = 439/1003 (43%), Positives = 567/1003 (56%), Gaps = 16/1003 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVS---GPNSTWESQTEKGNAEGVMFGSGP-LSSSCHS 170
            RSGSAPPT EGS  ++  L     S   G  ++  S  E+  +E  +      L+  C +
Sbjct: 57   RSGSAPPTMEGSFLSIDNLLSQQHSSTTGSLASLSSVIERCESEEQLLADPAYLAYYCAN 116

Query: 171  RNQNPRLPKDF-----QRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP        +R   H+G                           THKEE E++
Sbjct: 117  VNLNPRLPPPLISWENRRLVRHIGSFSQN--WGPVDDSGNAPLHVSQGSLPTHKEESEDD 174

Query: 336  RSPVSNLIRQGSSDWADRGFEYFS---GSSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            +SP     +Q SSDW D+  + +S    +SL  + K+  DLIQEDF  +P PVY+ SR+ 
Sbjct: 175  QSP-----KQVSSDWVDQTSQIWSEEDAASLVGQHKNAGDLIQEDFGGSPQPVYNHSRTL 229

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSID 686
             +   E       V                VT     + I  T+ ATS   +TV + + D
Sbjct: 230  GNEIPEEFIDQRPVSSSLHDPPI------NVT-----AAIRTTMVATSAD-NTVLSLNDD 277

Query: 687  SSSLPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSFNM 866
            SS  P+A S+                        LD    +  N +  + +    ++ N+
Sbjct: 278  SSPAPIASSSS-----------------------LDFTRTTGINDAGVAVIESEMKALNI 314

Query: 867  SDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQH 1046
            S+M     L   K  E  +    +H      QHQ  Q+ +   +    + Q ++Q  Y  
Sbjct: 315  SNM-----LENKKNQEQWQRSYQNHF----PQHQIHQQQNSLSQLQSGKSQIASQGAYIG 365

Query: 1047 YYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTN---PHLYATAAAAYMTSGNPYYQN 1217
              Q  H+  K                +  QP++ T+   P LYATAAA YM+S NPYY N
Sbjct: 366  MDQYLHSTTK--------------FAADVQPLLQTSGFTPPLYATAAA-YMSSANPYYSN 410

Query: 1218 IQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAG 1397
             Q   +F PQY +GGY +NPT   P + GY   GA+PV              S  V T G
Sbjct: 411  FQAPGVFPPQY-VGGYALNPTGFPPYIGGYHPPGAVPVVVDGTVGPSFNAQTS-GVATGG 468

Query: 1398 GIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGG 1577
             I  GAD+Q+L KF GQ G  LQT  +DPM M + Q+   +SY VS   D L+ RG    
Sbjct: 469  SISPGADMQHLSKFYGQLGFPLQTSFSDPMYMQYHQQPFVESYGVSSQFDSLASRG---- 524

Query: 1578 GLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRAVP-NPAFYGSSSNMGFLMQYXX 1754
            GL +    + A+   Y    K Q  R+G+LG     R  P +P ++GS+ N+G LMQY  
Sbjct: 525  GLDSKKVSNHAT---YLDDHKIQQQRNGSLGNLNPQRGGPVSPNYFGSAPNVGILMQYPT 581

Query: 1755 XXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASDKLSDIKCS 1934
                                         P+ + +  + G YSGW  Q   D   D K  
Sbjct: 582  SPLSGPVLPVS------------------PISSGR--NTGLYSGWPGQRGFDSFDDPKIY 621

Query: 1935 SFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPHAS 2114
            +FLEELK+ + R+FELSDI GH+VEFS DQHGSRFIQQKLE+ + E+K  VF+EVLPHAS
Sbjct: 622  NFLEELKSGKGRKFELSDITGHIVEFSADQHGSRFIQQKLENCSAEEKASVFKEVLPHAS 681

Query: 2115 KLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQ 2294
            KLMTDVFGNYVIQKFFE+GS QQRKELA QLSG+IL LSLQMYGCRV+QKALEV++++Q+
Sbjct: 682  KLMTDVFGNYVIQKFFEYGSSQQRKELAKQLSGQILPLSLQMYGCRVIQKALEVIEIEQK 741

Query: 2295 MQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVI 2474
            +QLV ELDGHV++CVRDQNGNHVIQKCIE +PTE+I FIISAF+GQV TLS HPYGCRVI
Sbjct: 742  VQLVHELDGHVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFHGQVATLSMHPYGCRVI 801

Query: 2475 QRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKV 2654
            QR+LEHCT++ +   I++EILE +C+LA+DQYGNYV QHVLE G+P ERS II KL G +
Sbjct: 802  QRVLEHCTDELQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPHERSQIISKLSGHI 861

Query: 2655 VQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLE 2834
            VQ+SQHKFASNVVEKCLEYG + ERE L+ E++G +E +ENL  MMKD FANYVIQK LE
Sbjct: 862  VQLSQHKFASNVVEKCLEYGGAAERERLVREIVGHNEGNENLLVMMKDQFANYVIQKALE 921

Query: 2835 TCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
             C D QR  L+  IR +++ALKKYTYGKHIV+R E+L   E +
Sbjct: 922  ICTDSQRVILINRIRAHTHALKKYTYGKHIVSRFEQLFGEENQ 964



 Score = 89.7 bits (221), Expect = 8e-15
 Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 7/240 (2%)
 Frame = +3

Query: 1815 RLTDQSIRFPMVTNKIASVGSYSGWQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDII 1994
            R+  +++    +  K+  V    G   +   D+  +      +E +   +   F +S   
Sbjct: 727  RVIQKALEVIEIEQKVQLVHELDGHVMRCVRDQNGNHVIQKCIESIPTEKIG-FIISAFH 785

Query: 1995 GHVVEFSGDQHGSRFIQQKLESATPEDK-ELVFQEVLPHASKLMTDVFGNYVIQKFFEHG 2171
            G V   S   +G R IQ+ LE  T E + + +  E+L     L  D +GNYV Q   E G
Sbjct: 786  GQVATLSMHPYGCRVIQRVLEHCTDELQCQFIVDEILESVCALAQDQYGNYVTQHVLERG 845

Query: 2172 SGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGH------VIK 2333
               +R ++  +LSG I+ LS   +   VV+K LE     ++ +LV E+ GH      ++ 
Sbjct: 846  KPHERSQIISKLSGHIVQLSQHKFASNVVEKCLEYGGAAERERLVREIVGHNEGNENLLV 905

Query: 2334 CVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKN 2513
             ++DQ  N+VIQK +E     Q   +I+        L  + YG  ++ R  +   E+ ++
Sbjct: 906  MMKDQFANYVIQKALEICTDSQRVILINRIRAHTHALKKYTYGKHIVSRFEQLFGEENQS 965


>ref|XP_001767683.1| predicted protein [Physcomitrella patens] gi|162681003|gb|EDQ67434.1|
            predicted protein [Physcomitrella patens]
          Length = 1085

 Score =  681 bits (1757), Expect = 0.0
 Identities = 440/1022 (43%), Positives = 574/1022 (56%), Gaps = 93/1022 (9%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFP---NYVSGPNSTWESQTEKG-NAEGVMFGSGPLSSSCHS 170
            RSGSAPP+ EGSLAA+GGL     ++  G  +  +S  E   +AE             +S
Sbjct: 67   RSGSAPPSVEGSLAAMGGLLDMPTSHKGGRGANVQSGEEDVLDAEEAQRADPKYLVYYYS 126

Query: 171  R-NQNPRLPKDF---------QRFGHHVG--GMGDRRMXXXXXXXXXXXXXXXXXXXXTH 314
              N NPRLP            QR    +G  G GD++                     TH
Sbjct: 127  NINLNPRLPPPLISWNNYRLAQRLQSGMGAAGFGDKKKLRSMDDSSSRSLFSSQPLLPTH 186

Query: 315  KEEPE---EERSPVSNLIRQGSSDWADR----GFEYFSGSSLGSRPKSLVDLIQEDFPRT 473
            +EEPE   E+ SP+  L R  SSDWA+R    G    S S LG RPKSLVDLIQEDFPRT
Sbjct: 187  REEPEVPEEDNSPMEALARTVSSDWAERERGDGLMGLS-SGLGPRPKSLVDLIQEDFPRT 245

Query: 474  PSPVYSLSRSAIHTANEGAD-SNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATS 650
            PSPVY LSRS+   AN+ ++ +N  ++             +       GS  +  +   S
Sbjct: 246  PSPVYHLSRSSSRAANDESEGANPVLELQLAHLRESGAGESNAGASGMGSRSTTPVPGVS 305

Query: 651  NSMHTVG---------------AGSIDSSSLPVAVSAGEPGET------KLSESANIAAG 767
            N   + G               A S+ S+S  +A   G  G +        S++ ++  G
Sbjct: 306  NLHQSSGPAAPVPRIPTPEILLASSVRSASPSLARMGGVSGLSGGNISFSSSDARSVGLG 365

Query: 768  GSNVNPELDTVILSSA-NTSDASKLVD---AFQSFNMSDMQGIN-------------NLS 896
             +  +   D   ++   N S ++   D   AFQ  +MSD+QG                  
Sbjct: 366  RAASSSAADFAQMAMPMNRSASASTADFEAAFQGLSMSDIQGSTAAREEREMQQQQQKQQ 425

Query: 897  QLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQ-HYYQIPHNQP 1073
            Q +Q +  + +      ++  Q Q Q++        + Q Q  AQA     Y Q    Q 
Sbjct: 426  QKQQQQQLQQQQEQQQARLQQQQQAQRQQQRAQIAAQAQSQAQAQAAQALAYSQAFQQQL 485

Query: 1074 KPNLSSNFIQTLPMAVQST---------FQPVVSTN---PHLYATAAAA-YMTSGNPYYQ 1214
             P + S +       V  T          QP V  N    ++YA AAAA YM   NPYY 
Sbjct: 486  YPGVDSGYRGQPKFGVGGTASQQAGAAGLQPNVGANNNPANMYAAAAAAMYMAQQNPYYP 545

Query: 1215 NIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTA 1394
            N+  AA++ PQ+ +GGY +NP +++P+M+GYP     P                 S+   
Sbjct: 546  NLNSAAVYGPQHGLGGYPVNPAMLAPMMAGYPPPVFDPATAAALA----------SMGVR 595

Query: 1395 GGI-----EMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSV 1559
            GG+     +   D+QNLYK+ G  G + Q H  DPM + ++ R+ E++   ++  DP  +
Sbjct: 596  GGVPGSPGQAAVDMQNLYKYAG--GASPQMH--DPMYLQYM-RAAEEARAAAL--DPSVL 648

Query: 1560 RGFIGGGLGNNMEFHK----ASMVGYAAQQKSQFVRSGNLGIPLVSR--AVPNPAFYGSS 1721
            R ++GGG  + +E  K    A + GY+A+QKSQF R+G++GIP+ S+     +PA+YGS 
Sbjct: 649  RNYMGGGPVDMVELQKNQLSAMLGGYSAEQKSQFGRAGSMGIPIASQKSGSMSPAYYGSP 708

Query: 1722 SNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNK------IASVGSYS 1883
              +G  M Y                      R  ++++R    +         AS  +Y+
Sbjct: 709  PGVG--MPYNNSPLTSPVLPGSPVGAGSFPMRRDERNMRLSSASRTSSGNMGAASGATYA 766

Query: 1884 GWQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESA 2063
            GWQ Q   +   + + S+ LEE KN++TRRFELSDI GHVVEFS DQHGSRFIQQKLE+A
Sbjct: 767  GWQGQKTGETTEESRGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETA 826

Query: 2064 TPEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMY 2243
            T EDK +VFQEVLP A  LMTDVFGNYVIQKFFEHG+ QQR+ELA +L G++L LSLQMY
Sbjct: 827  TLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMY 886

Query: 2244 GCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAF 2423
            GCRV+QKALEVVDVDQQ QLVSELDG+V++CVRDQNGNHVIQKCIECVP  +I FIISAF
Sbjct: 887  GCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAF 946

Query: 2424 YGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEH 2603
            Y QVVTLSTHPYGCRVIQR+LEHCT++QK  GIMEEIL   C+LA+DQYGNYV QHVLEH
Sbjct: 947  YNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEH 1006

Query: 2604 GRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQ 2783
            GR  ERS II KL G++VQMSQHKFASNVVEKCLEYG   ER++LIDEMLG ++E+E LQ
Sbjct: 1007 GRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQ 1066

Query: 2784 AM 2789
             +
Sbjct: 1067 VL 1068



 Score =  110 bits (276), Expect = 3e-21
 Identities = 71/267 (26%), Positives = 138/267 (51%), Gaps = 1/267 (0%)
 Frame = +3

Query: 2136 GNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSEL 2315
            G+ ++++F    S  +R EL+  ++G ++  S   +G R +Q+ LE   ++ +  +  E+
Sbjct: 782  GSTLLEEF--KNSKTRRFELS-DIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEV 838

Query: 2316 DGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHC 2495
                +  + D  GN+VIQK  E    +Q   + S   GQV+ LS   YGCRVIQ+ LE  
Sbjct: 839  LPRALVLMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMYGCRVIQKALEVV 898

Query: 2496 TEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHK 2675
              DQ+   ++ E+   +     DQ GN+V Q  +E   P +   II   + +VV +S H 
Sbjct: 899  DVDQQTQ-LVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHP 957

Query: 2676 FASNVVEKCLEYGNSKEREL-LIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQ 2852
            +   V+++ LE+   ++++  +++E+L       +   + +D + NYV+Q VLE   D +
Sbjct: 958  YGCRVIQRVLEHCTDEQKQKGIMEEIL------RSTCTLAQDQYGNYVVQHVLEHGRDHE 1011

Query: 2853 RQKLLACIRENSNALKKYTYGKHIVAR 2933
            R +++  +      + ++ +  ++V +
Sbjct: 1012 RSEIITKLAGQIVQMSQHKFASNVVEK 1038



 Score = 82.8 bits (203), Expect = 1e-12
 Identities = 54/186 (29%), Positives = 91/186 (48%)
 Frame = +3

Query: 2406 FIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVA 2585
            F +S   G VV  S   +G R IQ+ LE  T + KN  + +E+L     L  D +GNYV 
Sbjct: 797  FELSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNM-VFQEVLPRALVLMTDVFGNYVI 855

Query: 2586 QHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSE 2765
            Q   EHG  ++R  +  KL G+V+ +S   +   V++K LE  +  ++  L+ E+ G   
Sbjct: 856  QKFFEHGTHQQRRELASKLEGQVLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDG--- 912

Query: 2766 EHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKL 2945
               N+   ++D   N+VIQK +E     +   +++        L  + YG  ++ R  + 
Sbjct: 913  ---NVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEH 969

Query: 2946 ISLEEK 2963
             + E+K
Sbjct: 970  CTDEQK 975


>ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4 [Citrus sinensis]
          Length = 1014

 Score =  680 bits (1755), Expect = 0.0
 Identities = 432/1003 (43%), Positives = 568/1003 (56%), Gaps = 18/1003 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAEGV-MFGSGP--LSSSCHS 170
            RSGSAPP+ EGS+AA+G L   + S  N++ ES +   GN E      S P   +  C +
Sbjct: 59   RSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYESEEQLRSHPAYFAYYCSN 118

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ +R   H+G  G                        TH+EEPEE+
Sbjct: 119  VNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSNSVDDVGNGTLHLSRSSLSTHEEEPEED 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP     RQ S + ++    +F G   +SL  R KSLVDLIQEDFPRTPSPV++ SRS+
Sbjct: 179  RSP-----RQASENLSEISSAFFPGQKSTSLVGRHKSLVDLIQEDFPRTPSPVFNQSRSS 233

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSID 686
             H   E  D +                   ++       IS T  A  ++   V    +D
Sbjct: 234  SHATEELIDLDVHA----------------ISLDVSSMNISETPEANGSADVHVDPCVMD 277

Query: 687  SSSLPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSFNM 866
               + + +S   P     S S       ++ NP +D     +A   D + +  A QS   
Sbjct: 278  PQDIAL-ISNNGPAAVSFSSSPCPDGTETSRNPRIDDTNSKNAGLEDVASVSAASQS--- 333

Query: 867  SDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQH 1046
             D+    +  + KQ E  + +G     Q  S  QG Q   + G QG+    G   A    
Sbjct: 334  -DVSRAESRMRKKQEEQ-KYQGRIMMQQYPSAQQGFQ-YQVQGVQGQAVSLGMNNA---- 386

Query: 1047 YYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGNPYYQNIQP 1226
                 HN    N   +   +   A  S   P ++  P LYA+A   YM SGNP+Y + QP
Sbjct: 387  -----HNGMDKNSYGHGKFSSFEAQPSMNSPGLT--PPLYASAGT-YMASGNPFYPSFQP 438

Query: 1227 --AALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGG 1400
              A ++  QY++GGY +N  L  P ++GYP+QG +P+              + SV+T  G
Sbjct: 439  SGAGVYPSQYNVGGYALNSALFPPFVAGYPSQGPVPMPFDATSGSSFNIRTT-SVSTGEG 497

Query: 1401 IEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGG 1580
            I      Q+  KF G  G  LQ+   DP+ M + Q    D+YN S+    L+  G + G 
Sbjct: 498  IPHIGSTQH-QKFYGHQGLMLQSPFVDPLHMQYFQHPFGDAYNASV-QHRLASSG-VNGA 554

Query: 1581 LGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRA-VPNPAFYGSSSNMGFLMQYXXX 1757
            L +     +  +  Y   Q  Q   +G   I    +  +P   +YG    MG + Q+   
Sbjct: 555  LADPSSKKEPIVAAYMGDQNLQSSLNGGPSISNPRKVGMPVGGYYGGLPGMGVMGQFPTS 614

Query: 1758 XXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASD---KLSDIK 1928
                                     +R P   N+  + G YSGWQ Q   +      D K
Sbjct: 615  PIASPVLPSSPVGSTSQLG--LRHEMRLPQGLNR--NTGIYSGWQGQRTFEGQRTFEDSK 670

Query: 1929 CSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPH 2108
              SFLEELK++  ++FELSDI G +VEFS DQHGSRFIQQKLE  + E+K  VF+EVLPH
Sbjct: 671  KHSFLEELKSSNAQKFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVSVFKEVLPH 730

Query: 2109 ASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVD 2288
            ASKLMTDVFGNYVIQKFFEHGS  QRKEL+ +L G++L LSLQMYGCRV+QKALEV+++ 
Sbjct: 731  ASKLMTDVFGNYVIQKFFEHGSPDQRKELSEKLVGQVLPLSLQMYGCRVIQKALEVIELH 790

Query: 2289 QQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCR 2468
            Q+ QLV ELDGHV++CVRDQNGNHVIQKC+ECVP E+IEFIISAF GQV TLSTHPYGCR
Sbjct: 791  QKSQLVLELDGHVMRCVRDQNGNHVIQKCVECVPAEKIEFIISAFRGQVATLSTHPYGCR 850

Query: 2469 VIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFG 2648
            VIQR+LEHC+++Q+   I++EILE   +LA+DQYGNYV QHVLE G+P ER+ I+ KL G
Sbjct: 851  VIQRVLEHCSDEQQGQCIVDEILESAFALAQDQYGNYVTQHVLERGKPYERTQILSKLAG 910

Query: 2649 KVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKV 2828
            K+VQMSQHK+ASNVVEKCLEYG++ ERELLI+E+LG SEE++NL  MMKD +ANYV+QK+
Sbjct: 911  KIVQMSQHKYASNVVEKCLEYGDTAERELLIEEILGQSEENDNLLVMMKDQYANYVVQKI 970

Query: 2829 LETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLE 2957
            LE CN+  R+ L++ IR + +ALKKYTYGKHIVAR E+L   E
Sbjct: 971  LEKCNEKLRETLISRIRVHCDALKKYTYGKHIVARFEQLYGEE 1013



 Score =  118 bits (296), Expect = 2e-23
 Identities = 79/271 (29%), Positives = 143/271 (52%), Gaps = 8/271 (2%)
 Frame = +3

Query: 2172 SGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQN 2351
            S  Q+ EL+  ++GRI+  S+  +G R +Q+ LE    ++++ +  E+  H  K + D  
Sbjct: 681  SNAQKFELS-DIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVSVFKEVLPHASKLMTDVF 739

Query: 2352 GNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEE 2531
            GN+VIQK  E    +Q + +     GQV+ LS   YGCRVIQ+ LE     QK+  ++E 
Sbjct: 740  GNYVIQKFFEHGSPDQRKELSEKLVGQVLPLSLQMYGCRVIQKALEVIELHQKSQLVLE- 798

Query: 2532 ILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEY 2711
            +   +     DQ GN+V Q  +E    ++   II    G+V  +S H +   V+++ LE+
Sbjct: 799  LDGHVMRCVRDQNGNHVIQKCVECVPAEKIEFIISAFRGQVATLSTHPYGCRVIQRVLEH 858

Query: 2712 GNSKER-ELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENS 2888
             + +++ + ++DE+L      E+  A+ +D + NYV Q VLE     +R ++L+ +    
Sbjct: 859  CSDEQQGQCIVDEIL------ESAFALAQDQYGNYVTQHVLERGKPYERTQILSKLAGKI 912

Query: 2889 NALKKYTYGKHIVAR-------AEKLISLEE 2960
              + ++ Y  ++V +       AE+ + +EE
Sbjct: 913  VQMSQHKYASNVVEKCLEYGDTAERELLIEE 943



 Score = 91.7 bits (226), Expect = 2e-15
 Identities = 54/187 (28%), Positives = 98/187 (52%)
 Frame = +3

Query: 2403 EFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYV 2582
            +F +S   G++V  S   +G R IQ+ LEHC+ ++K + + +E+L     L  D +GNYV
Sbjct: 685  KFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVS-VFKEVLPHASKLMTDVFGNYV 743

Query: 2583 AQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDS 2762
             Q   EHG P +R  + +KL G+V+ +S   +   V++K LE     ++  L+ E+ G  
Sbjct: 744  IQKFFEHGSPDQRKELSEKLVGQVLPLSLQMYGCRVIQKALEVIELHQKSQLVLELDG-- 801

Query: 2763 EEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEK 2942
                ++   ++D   N+VIQK +E     + + +++  R     L  + YG  ++ R  +
Sbjct: 802  ----HVMRCVRDQNGNHVIQKCVECVPAEKIEFIISAFRGQVATLSTHPYGCRVIQRVLE 857

Query: 2943 LISLEEK 2963
              S E++
Sbjct: 858  HCSDEQQ 864


>ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
            gi|567887730|ref|XP_006436387.1| hypothetical protein
            CICLE_v100306131mg [Citrus clementina]
            gi|557538581|gb|ESR49625.1| hypothetical protein
            CICLE_v100306131mg [Citrus clementina]
            gi|557538583|gb|ESR49627.1| hypothetical protein
            CICLE_v100306131mg [Citrus clementina]
          Length = 1019

 Score =  674 bits (1740), Expect = 0.0
 Identities = 433/1016 (42%), Positives = 563/1016 (55%), Gaps = 26/1016 (2%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAEGV-MFGSGP--LSSSCHS 170
            RSGSAPP+ EGS+AA+G L   + S  N++ ES +   GN E      S P   +  C +
Sbjct: 59   RSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYESEEQLRSHPAYFAYYCSN 118

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ +R   H+G  G                        TH+EEPEE+
Sbjct: 119  VNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSTSVDDAGNGTLHLSRSSLSTHEEEPEED 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP     RQ S + ++    +F G   +SL  R KSLVDLIQEDFPRTPSPV++ SRS+
Sbjct: 179  RSP-----RQASDNLSEISSAFFPGQKSTSLVGRHKSLVDLIQEDFPRTPSPVFNQSRSS 233

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSID 686
             H   E  D                          D   IS  +S+ + S      GS D
Sbjct: 234  SHATEELID-------------------------LDVHAISLDVSSMNISEAPEANGSAD 268

Query: 687  SSSLP--------VAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLV 842
                P          +S   P     S S       ++ NP +D     +A   D +  V
Sbjct: 269  VHVDPCVMDPQDIALISNNGPAAVSFSSSPCPDGTETSRNPRIDDTNSKNAGLEDVAS-V 327

Query: 843  DAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQG 1022
             A    ++S  +        K+ E  + +G     Q  S  QG Q   + G QG+    G
Sbjct: 328  SAASQLDVSRAES----RMRKKQEEQKYQGRIMMQQYPSAQQGFQ-YQVQGVQGQAVSLG 382

Query: 1023 SAQALYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGN 1202
               A         HN    N   +   +   A  S   P     P LYA +A  YM SGN
Sbjct: 383  MNNA---------HNGMDKNSYGHGKFSSFEAQPSMNSP--GLTPPLYA-SAGTYMPSGN 430

Query: 1203 PYYQNIQPA--ALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXS 1376
            P+Y + QP+   ++  QY++GGY +N     P ++GYP+QG +P+              +
Sbjct: 431  PFYPSFQPSGPGVYPSQYNVGGYALNSAHFPPFVAGYPSQGPVPM-PFDATSGSSFNIRT 489

Query: 1377 RSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLS 1556
             SV+T  GI      Q+  KF G  G  LQ+   DP+ M + Q    D+YN S +   L+
Sbjct: 490  TSVSTGEGIPHIGSTQH-QKFYGHQGLMLQSPFVDPLHMQYFQHPFGDAYNAS-VQHRLA 547

Query: 1557 VRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSR-AVPNPAFYGSSSNMG 1733
              G + G L +     +  +  Y   Q  Q   +G   I    +  +P   +YG    MG
Sbjct: 548  SSG-VNGALADPSSKKEPIVAAYMGDQNLQSSLNGGPSISNPRKVGMPVGGYYGGLPGMG 606

Query: 1734 FLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASD- 1910
             + Q+                            +R P   N+  + G YSGWQ Q   + 
Sbjct: 607  VMGQFPTSPIASPVLPSSPVGSTSQLG--LRHEMRLPQGLNR--NTGIYSGWQGQRTFEG 662

Query: 1911 --KLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKEL 2084
                 D K  SFLEELK++  ++FELSDI G +VEFS DQHGSRFIQQKLE  + E+K  
Sbjct: 663  QRTFEDSKKHSFLEELKSSNAQKFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVS 722

Query: 2085 VFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQK 2264
            VF+EVLPHASKLMTDVFGNYVIQKFFEHGS  QRKELA +L G++L LSLQMYGCRV+QK
Sbjct: 723  VFKEVLPHASKLMTDVFGNYVIQKFFEHGSPDQRKELAEKLVGQVLPLSLQMYGCRVIQK 782

Query: 2265 ALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTL 2444
            ALEV+++ Q+ QLV ELDGHV++CVRDQNGNHVIQKCIECVP E+IEFIISAF GQV TL
Sbjct: 783  ALEVIELHQKSQLVLELDGHVMRCVRDQNGNHVIQKCIECVPAEKIEFIISAFRGQVATL 842

Query: 2445 STHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERS 2624
            STHPYGCRVIQR+LEHC+++Q+   I++EILE   +LA+DQYGNYV QHVLE G+  ER+
Sbjct: 843  STHPYGCRVIQRVLEHCSDEQQGQCIVDEILESAFALAQDQYGNYVTQHVLERGKSYERT 902

Query: 2625 IIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPF 2804
             I+ KL GK+VQMSQHK+ASNV+EKCLEYG++ ERELLI+E+LG SEE++NL  MMKD +
Sbjct: 903  QILSKLAGKIVQMSQHKYASNVIEKCLEYGDTAERELLIEEILGQSEENDNLLVMMKDQY 962

Query: 2805 ANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEKPLE 2972
            ANYV+QK+LE CN+  R+ L++ IR + +ALKKYTYGKHIVAR E+L   E +P E
Sbjct: 963  ANYVVQKILEKCNEKLRETLISRIRVHCDALKKYTYGKHIVARFEQLYGEESQPSE 1018


>gb|EOY31966.1| Pumilio 5, putative isoform 3 [Theobroma cacao]
          Length = 1029

 Score =  671 bits (1730), Expect = 0.0
 Identities = 428/1022 (41%), Positives = 581/1022 (56%), Gaps = 32/1022 (3%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNY---VSGPNSTWESQTEKGNAEGVMFGSGP-LSSSCHS 170
            RSGSAPP+ EGS  A+  L       V+  +++  S  EK  +E  +      ++  C +
Sbjct: 57   RSGSAPPSMEGSYLAIDNLISQQNPTVNLNSASLNSALEKCQSEEQLCAHPAYIAYYCSN 116

Query: 171  RNQNPRLPKDF-----QRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP        Q     +G  G+ ++                    THKE PE++
Sbjct: 117  VNLNPRLPPPLISWRNQHLKCQIGRFGNNQVLSSIDDSGNTFLHFSKGSLSTHKEVPEDD 176

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            +SP     RQ S D  +    +  G   +SL  + K  V+L+QE+FP T SPVY+ S+  
Sbjct: 177  QSP-----RQSSDDLIESANGFLFGQDAASLVGQQKESVNLVQENFPCTSSPVYNQSQPL 231

Query: 507  IHTANE----GADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGA 674
             +   E      DSNS  D                  +   S I+ T+ A       +G 
Sbjct: 232  SYGITEMDYCDGDSNSLHDL----------------SISAASTITSTLDAD------IGL 269

Query: 675  GS-IDSSSLPVAVSAGEPGETKLSESANIAAGGSNVNPEL---DTVILSSANTSDASKLV 842
             S  D  ++P + S   P  T  + S      G   N ++   D  I+  A++SD S + 
Sbjct: 270  SSRADQKTIPSSSSLSHPC-TATASSVPYLQKGVLHNRDIHLKDEAIVGDASSSDVSVIE 328

Query: 843  DAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQG 1022
                    S+M+G+N +S L+             +Q S  H+ Q++     +   VQ QG
Sbjct: 329  --------SEMKGLN-ISTLR-------------LQNSENHKNQEQKRRNYQNSLVQHQG 366

Query: 1023 SAQALYQHYY-QIPHNQPKPN------LSSNFIQTLPMAVQSTFQPVVSTN---PHLYAT 1172
              Q     +  Q   +Q  P       +  +     P    +  QPV+ ++   P  YAT
Sbjct: 367  PFQQPSNPFQVQTAKSQSTPQGVNGAYIGMDQFMQAPSKFAAEVQPVLQSSGFTPPFYAT 426

Query: 1173 AAAAYMTSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXX 1352
            A   YM + NP+Y N+Q   L +PQY +GGY  N + + P ++ YP  GA+P        
Sbjct: 427  AG--YMPTPNPFYTNVQAPGLHSPQYGVGGYGFNSSAVPPFIT-YPPNGAIPFVFDGPMG 483

Query: 1353 XXXXXXXSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNV 1532
                     +V++ G I  GAD+Q+L KF GQFG   Q+   DP+ M   Q+   ++Y +
Sbjct: 484  PNFNAQMP-AVSSGGSIANGADMQHLNKFYGQFGYAAQSSFGDPLYMQCYQQPFGEAYGI 542

Query: 1533 SMLSDPLSVRGFIGGGLGNNMEFHKASMVGYAAQ-QKSQFVRSGNLGIPLVSRA-VPNPA 1706
            S   DP++ RG I G   +  + HK S +    + QK Q  R G        R  + +P 
Sbjct: 543  SGQYDPMA-RGGIVGSQNSAFDSHKGSNLAACTEDQKLQHQRGGGSSNLHTGRGGLMSPH 601

Query: 1707 FYGSSSNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSG 1886
            + G+  NM   +QY                         D  IRF       AS G +SG
Sbjct: 602  YVGNPQNM---IQYPSASFASPVMPGSQVAGTGVPVGKND--IRFA------ASSGIHSG 650

Query: 1887 WQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESAT 2066
            WQ Q   +  +D +  +FLEELK+ + RRFELSDI+GH+VEFS DQHGSRFIQQKLE+ +
Sbjct: 651  WQPQRGFESSNDPQIYNFLEELKSGKGRRFELSDIVGHIVEFSADQHGSRFIQQKLENCS 710

Query: 2067 PEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYG 2246
             E+K  VF+EVLPHASKLMTDVFGNYVIQKFFE+GS +QRKELA++LSG+ILN SLQMYG
Sbjct: 711  IEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPEQRKELAYKLSGQILNFSLQMYG 770

Query: 2247 CRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFY 2426
            CRV+QKALEV+D++Q+ QLV ELDGHV++CVRDQNGNHVIQKCIE VPT++I FIISAF+
Sbjct: 771  CRVIQKALEVIDLEQKAQLVRELDGHVMRCVRDQNGNHVIQKCIESVPTDKIGFIISAFH 830

Query: 2427 GQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHG 2606
            GQV TLSTHPYGCRVIQR+LEHCT++Q+   I++EILE +C+LA+DQYGNYV QHVLE G
Sbjct: 831  GQVATLSTHPYGCRVIQRVLEHCTDEQQCQFIVDEILESVCALAQDQYGNYVTQHVLERG 890

Query: 2607 RPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQA 2786
            + +ERS II KL G +VQ+SQHKFASNV+EKCLEYG+  ERE++++E++G +E ++NL  
Sbjct: 891  KHQERSKIISKLSGYIVQLSQHKFASNVIEKCLEYGSPSEREVIVEEIVGHTEGNDNLLI 950

Query: 2787 MMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEKP 2966
            MMKD FANYV+QK+ ETC D QR  LL+ IR +++ALKKYTYGKHIVAR E+L   E+  
Sbjct: 951  MMKDQFANYVVQKIFETCTDNQRAVLLSRIRLHAHALKKYTYGKHIVARFEQLFGEEKIR 1010

Query: 2967 LE 2972
            L+
Sbjct: 1011 LQ 1012


>ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
            gi|557538582|gb|ESR49626.1| hypothetical protein
            CICLE_v100306131mg [Citrus clementina]
          Length = 1014

 Score =  670 bits (1729), Expect = 0.0
 Identities = 431/1011 (42%), Positives = 560/1011 (55%), Gaps = 26/1011 (2%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAEGV-MFGSGP--LSSSCHS 170
            RSGSAPP+ EGS+AA+G L   + S  N++ ES +   GN E      S P   +  C +
Sbjct: 59   RSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYESEEQLRSHPAYFAYYCSN 118

Query: 171  RNQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++ +R   H+G  G                        TH+EEPEE+
Sbjct: 119  VNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSTSVDDAGNGTLHLSRSSLSTHEEEPEED 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            RSP     RQ S + ++    +F G   +SL  R KSLVDLIQEDFPRTPSPV++ SRS+
Sbjct: 179  RSP-----RQASDNLSEISSAFFPGQKSTSLVGRHKSLVDLIQEDFPRTPSPVFNQSRSS 233

Query: 507  IHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSID 686
             H   E  D                          D   IS  +S+ + S      GS D
Sbjct: 234  SHATEELID-------------------------LDVHAISLDVSSMNISEAPEANGSAD 268

Query: 687  SSSLP--------VAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLV 842
                P          +S   P     S S       ++ NP +D     +A   D +  V
Sbjct: 269  VHVDPCVMDPQDIALISNNGPAAVSFSSSPCPDGTETSRNPRIDDTNSKNAGLEDVAS-V 327

Query: 843  DAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQG 1022
             A    ++S  +        K+ E  + +G     Q  S  QG Q   + G QG+    G
Sbjct: 328  SAASQLDVSRAES----RMRKKQEEQKYQGRIMMQQYPSAQQGFQ-YQVQGVQGQAVSLG 382

Query: 1023 SAQALYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGN 1202
               A         HN    N   +   +   A  S   P     P LYA +A  YM SGN
Sbjct: 383  MNNA---------HNGMDKNSYGHGKFSSFEAQPSMNSP--GLTPPLYA-SAGTYMPSGN 430

Query: 1203 PYYQNIQPA--ALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXS 1376
            P+Y + QP+   ++  QY++GGY +N     P ++GYP+QG +P+              +
Sbjct: 431  PFYPSFQPSGPGVYPSQYNVGGYALNSAHFPPFVAGYPSQGPVPM-PFDATSGSSFNIRT 489

Query: 1377 RSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLS 1556
             SV+T  GI      Q+  KF G  G  LQ+   DP+ M + Q    D+YN S +   L+
Sbjct: 490  TSVSTGEGIPHIGSTQH-QKFYGHQGLMLQSPFVDPLHMQYFQHPFGDAYNAS-VQHRLA 547

Query: 1557 VRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSR-AVPNPAFYGSSSNMG 1733
              G + G L +     +  +  Y   Q  Q   +G   I    +  +P   +YG    MG
Sbjct: 548  SSG-VNGALADPSSKKEPIVAAYMGDQNLQSSLNGGPSISNPRKVGMPVGGYYGGLPGMG 606

Query: 1734 FLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASD- 1910
             + Q+                            +R P   N+  + G YSGWQ Q   + 
Sbjct: 607  VMGQFPTSPIASPVLPSSPVGSTSQLG--LRHEMRLPQGLNR--NTGIYSGWQGQRTFEG 662

Query: 1911 --KLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKEL 2084
                 D K  SFLEELK++  ++FELSDI G +VEFS DQHGSRFIQQKLE  + E+K  
Sbjct: 663  QRTFEDSKKHSFLEELKSSNAQKFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVS 722

Query: 2085 VFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQK 2264
            VF+EVLPHASKLMTDVFGNYVIQKFFEHGS  QRKELA +L G++L LSLQMYGCRV+QK
Sbjct: 723  VFKEVLPHASKLMTDVFGNYVIQKFFEHGSPDQRKELAEKLVGQVLPLSLQMYGCRVIQK 782

Query: 2265 ALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTL 2444
            ALEV+++ Q+ QLV ELDGHV++CVRDQNGNHVIQKCIECVP E+IEFIISAF GQV TL
Sbjct: 783  ALEVIELHQKSQLVLELDGHVMRCVRDQNGNHVIQKCIECVPAEKIEFIISAFRGQVATL 842

Query: 2445 STHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERS 2624
            STHPYGCRVIQR+LEHC+++Q+   I++EILE   +LA+DQYGNYV QHVLE G+  ER+
Sbjct: 843  STHPYGCRVIQRVLEHCSDEQQGQCIVDEILESAFALAQDQYGNYVTQHVLERGKSYERT 902

Query: 2625 IIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPF 2804
             I+ KL GK+VQMSQHK+ASNV+EKCLEYG++ ERELLI+E+LG SEE++NL  MMKD +
Sbjct: 903  QILSKLAGKIVQMSQHKYASNVIEKCLEYGDTAERELLIEEILGQSEENDNLLVMMKDQY 962

Query: 2805 ANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLE 2957
            ANYV+QK+LE CN+  R+ L++ IR + +ALKKYTYGKHIVAR E+L   E
Sbjct: 963  ANYVVQKILEKCNEKLRETLISRIRVHCDALKKYTYGKHIVARFEQLYGEE 1013



 Score =  119 bits (298), Expect = 9e-24
 Identities = 78/271 (28%), Positives = 143/271 (52%), Gaps = 8/271 (2%)
 Frame = +3

Query: 2172 SGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQN 2351
            S  Q+ EL+  ++GRI+  S+  +G R +Q+ LE    ++++ +  E+  H  K + D  
Sbjct: 681  SNAQKFELS-DIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVSVFKEVLPHASKLMTDVF 739

Query: 2352 GNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEE 2531
            GN+VIQK  E    +Q + +     GQV+ LS   YGCRVIQ+ LE     QK+  ++E 
Sbjct: 740  GNYVIQKFFEHGSPDQRKELAEKLVGQVLPLSLQMYGCRVIQKALEVIELHQKSQLVLE- 798

Query: 2532 ILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEY 2711
            +   +     DQ GN+V Q  +E    ++   II    G+V  +S H +   V+++ LE+
Sbjct: 799  LDGHVMRCVRDQNGNHVIQKCIECVPAEKIEFIISAFRGQVATLSTHPYGCRVIQRVLEH 858

Query: 2712 GNSKER-ELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENS 2888
             + +++ + ++DE+L      E+  A+ +D + NYV Q VLE     +R ++L+ +    
Sbjct: 859  CSDEQQGQCIVDEIL------ESAFALAQDQYGNYVTQHVLERGKSYERTQILSKLAGKI 912

Query: 2889 NALKKYTYGKHIVAR-------AEKLISLEE 2960
              + ++ Y  +++ +       AE+ + +EE
Sbjct: 913  VQMSQHKYASNVIEKCLEYGDTAERELLIEE 943



 Score = 92.4 bits (228), Expect = 1e-15
 Identities = 54/187 (28%), Positives = 98/187 (52%)
 Frame = +3

Query: 2403 EFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYV 2582
            +F +S   G++V  S   +G R IQ+ LEHC+ ++K + + +E+L     L  D +GNYV
Sbjct: 685  KFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSAEEKVS-VFKEVLPHASKLMTDVFGNYV 743

Query: 2583 AQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDS 2762
             Q   EHG P +R  + +KL G+V+ +S   +   V++K LE     ++  L+ E+ G  
Sbjct: 744  IQKFFEHGSPDQRKELAEKLVGQVLPLSLQMYGCRVIQKALEVIELHQKSQLVLELDG-- 801

Query: 2763 EEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEK 2942
                ++   ++D   N+VIQK +E     + + +++  R     L  + YG  ++ R  +
Sbjct: 802  ----HVMRCVRDQNGNHVIQKCIECVPAEKIEFIISAFRGQVATLSTHPYGCRVIQRVLE 857

Query: 2943 LISLEEK 2963
              S E++
Sbjct: 858  HCSDEQQ 864


>gb|EOY31964.1| Pumilio 5, putative isoform 1 [Theobroma cacao]
            gi|508784709|gb|EOY31965.1| Pumilio 5, putative isoform 1
            [Theobroma cacao]
          Length = 1013

 Score =  670 bits (1729), Expect = 0.0
 Identities = 427/1019 (41%), Positives = 579/1019 (56%), Gaps = 32/1019 (3%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNY---VSGPNSTWESQTEKGNAEGVMFGSGP-LSSSCHS 170
            RSGSAPP+ EGS  A+  L       V+  +++  S  EK  +E  +      ++  C +
Sbjct: 57   RSGSAPPSMEGSYLAIDNLISQQNPTVNLNSASLNSALEKCQSEEQLCAHPAYIAYYCSN 116

Query: 171  RNQNPRLPKDF-----QRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP        Q     +G  G+ ++                    THKE PE++
Sbjct: 117  VNLNPRLPPPLISWRNQHLKCQIGRFGNNQVLSSIDDSGNTFLHFSKGSLSTHKEVPEDD 176

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSG---SSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSA 506
            +SP     RQ S D  +    +  G   +SL  + K  V+L+QE+FP T SPVY+ S+  
Sbjct: 177  QSP-----RQSSDDLIESANGFLFGQDAASLVGQQKESVNLVQENFPCTSSPVYNQSQPL 231

Query: 507  IHTANE----GADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGA 674
             +   E      DSNS  D                  +   S I+ T+ A       +G 
Sbjct: 232  SYGITEMDYCDGDSNSLHDL----------------SISAASTITSTLDAD------IGL 269

Query: 675  GS-IDSSSLPVAVSAGEPGETKLSESANIAAGGSNVNPEL---DTVILSSANTSDASKLV 842
             S  D  ++P + S   P  T  + S      G   N ++   D  I+  A++SD S + 
Sbjct: 270  SSRADQKTIPSSSSLSHPC-TATASSVPYLQKGVLHNRDIHLKDEAIVGDASSSDVSVIE 328

Query: 843  DAFQSFNMSDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQG 1022
                    S+M+G+N +S L+             +Q S  H+ Q++     +   VQ QG
Sbjct: 329  --------SEMKGLN-ISTLR-------------LQNSENHKNQEQKRRNYQNSLVQHQG 366

Query: 1023 SAQALYQHYY-QIPHNQPKPN------LSSNFIQTLPMAVQSTFQPVVSTN---PHLYAT 1172
              Q     +  Q   +Q  P       +  +     P    +  QPV+ ++   P  YAT
Sbjct: 367  PFQQPSNPFQVQTAKSQSTPQGVNGAYIGMDQFMQAPSKFAAEVQPVLQSSGFTPPFYAT 426

Query: 1173 AAAAYMTSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXX 1352
            A   YM + NP+Y N+Q   L +PQY +GGY  N + + P ++ YP  GA+P        
Sbjct: 427  AG--YMPTPNPFYTNVQAPGLHSPQYGVGGYGFNSSAVPPFIT-YPPNGAIPFVFDGPMG 483

Query: 1353 XXXXXXXSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNV 1532
                     +V++ G I  GAD+Q+L KF GQFG   Q+   DP+ M   Q+   ++Y +
Sbjct: 484  PNFNAQMP-AVSSGGSIANGADMQHLNKFYGQFGYAAQSSFGDPLYMQCYQQPFGEAYGI 542

Query: 1533 SMLSDPLSVRGFIGGGLGNNMEFHKASMVGYAAQ-QKSQFVRSGNLGIPLVSRA-VPNPA 1706
            S   DP++ RG I G   +  + HK S +    + QK Q  R G        R  + +P 
Sbjct: 543  SGQYDPMA-RGGIVGSQNSAFDSHKGSNLAACTEDQKLQHQRGGGSSNLHTGRGGLMSPH 601

Query: 1707 FYGSSSNMGFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSG 1886
            + G+  NM   +QY                         D  IRF       AS G +SG
Sbjct: 602  YVGNPQNM---IQYPSASFASPVMPGSQVAGTGVPVGKND--IRFA------ASSGIHSG 650

Query: 1887 WQSQSASDKLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESAT 2066
            WQ Q   +  +D +  +FLEELK+ + RRFELSDI+GH+VEFS DQHGSRFIQQKLE+ +
Sbjct: 651  WQPQRGFESSNDPQIYNFLEELKSGKGRRFELSDIVGHIVEFSADQHGSRFIQQKLENCS 710

Query: 2067 PEDKELVFQEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYG 2246
             E+K  VF+EVLPHASKLMTDVFGNYVIQKFFE+GS +QRKELA++LSG+ILN SLQMYG
Sbjct: 711  IEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPEQRKELAYKLSGQILNFSLQMYG 770

Query: 2247 CRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFY 2426
            CRV+QKALEV+D++Q+ QLV ELDGHV++CVRDQNGNHVIQKCIE VPT++I FIISAF+
Sbjct: 771  CRVIQKALEVIDLEQKAQLVRELDGHVMRCVRDQNGNHVIQKCIESVPTDKIGFIISAFH 830

Query: 2427 GQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHG 2606
            GQV TLSTHPYGCRVIQR+LEHCT++Q+   I++EILE +C+LA+DQYGNYV QHVLE G
Sbjct: 831  GQVATLSTHPYGCRVIQRVLEHCTDEQQCQFIVDEILESVCALAQDQYGNYVTQHVLERG 890

Query: 2607 RPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQA 2786
            + +ERS II KL G +VQ+SQHKFASNV+EKCLEYG+  ERE++++E++G +E ++NL  
Sbjct: 891  KHQERSKIISKLSGYIVQLSQHKFASNVIEKCLEYGSPSEREVIVEEIVGHTEGNDNLLI 950

Query: 2787 MMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEK 2963
            MMKD FANYV+QK+ ETC D QR  LL+ IR +++ALKKYTYGKHIVAR E+L   E +
Sbjct: 951  MMKDQFANYVVQKIFETCTDNQRAVLLSRIRLHAHALKKYTYGKHIVARFEQLFGEENQ 1009



 Score = 88.2 bits (217), Expect = 2e-14
 Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
 Frame = +3

Query: 1974 FELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDK-ELVFQEVLPHASKLMTDVFGNYVI 2150
            F +S   G V   S   +G R IQ+ LE  T E + + +  E+L     L  D +GNYV 
Sbjct: 824  FIISAFHGQVATLSTHPYGCRVIQRVLEHCTDEQQCQFIVDEILESVCALAQDQYGNYVT 883

Query: 2151 QKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGH-- 2324
            Q   E G  Q+R ++  +LSG I+ LS   +   V++K LE     ++  +V E+ GH  
Sbjct: 884  QHVLERGKHQERSKIISKLSGYIVQLSQHKFASNVIEKCLEYGSPSEREVIVEEIVGHTE 943

Query: 2325 ----VIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEH 2492
                ++  ++DQ  N+V+QK  E     Q   ++S        L  + YG  ++ R  + 
Sbjct: 944  GNDNLLIMMKDQFANYVVQKIFETCTDNQRAVLLSRIRLHAHALKKYTYGKHIVARFEQL 1003

Query: 2493 CTEDQKNNG 2519
              E+ +  G
Sbjct: 1004 FGEENQTTG 1012


>ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|223547222|gb|EEF48717.1|
            pumilio, putative [Ricinus communis]
          Length = 1004

 Score =  669 bits (1726), Expect = 0.0
 Identities = 419/998 (41%), Positives = 558/998 (55%), Gaps = 17/998 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNY---VSGPNSTWESQTEKGNAEGVMFGSGPLSSSCHSR 173
            RSGSAPP+ EGS AA+G L       +S    +  S  E   +E  +       +  +S 
Sbjct: 59   RSGSAPPSMEGSFAAIGKLLAQQNFSMSSSLKSLSSAIENYESEEQLLSDPAYLAYYNSN 118

Query: 174  -NQNPRLP-----KDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N NPRLP     ++  R   H+GG+G++                       H+EEP +E
Sbjct: 119  INLNPRLPPPLLSRESHRLARHIGGLGNK---WRPSVDDGGNKSIQLSTLSIHEEEPGDE 175

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSGSSLGSRPKSLVDLIQEDFPRTPSPVYSLSRSAIHT 515
            +SP        +SD         +   L  R KSLVDLIQEDFPRTPSPVYS SRS+ H 
Sbjct: 176  KSPTE------ASDNTSVRIHGQNAILLAGRHKSLVDLIQEDFPRTPSPVYSQSRSSSHA 229

Query: 516  ANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAGSIDSSS 695
            A E  D    VD             +K +E   GS         S+      A  +D+  
Sbjct: 230  AEEAVD----VDAHAISSNVSPVNISKGSESNSGS---------SDVCVDTFALEVDAIR 276

Query: 696  LPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSFNMSDM 875
            L   +S   P  T  S S ++         E  T     + T D +  +++  SF  +  
Sbjct: 277  L---ISDTHPTVTSFSSSYSL--------DEKPTGEKDESGTEDTA--LESHVSFRGTLQ 323

Query: 876  QGINNLSQLKQHEAPEGEG-------NSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQA 1034
            +GI+      +++  E +        N   +Q    HQ Q      G Q ++  QG  Q+
Sbjct: 324  RGISRTEARARNKQEEQQSYGKNVPQNHLSVQQGIPHQAQ------GVQAQIISQGMTQS 377

Query: 1035 LYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGNPYYQ 1214
                     HN    ++ S       + VQ          P   +TAA  YMT G P+Y 
Sbjct: 378  ---------HNSL--DILSYDHHRFSIEVQQPMHSSALNQPSYASTAA--YMTGGTPFYP 424

Query: 1215 NIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTA 1394
            N QP+ L++PQYS+GGY +    + P ++GYP+  A+P+              S   +T 
Sbjct: 425  NFQPSGLYSPQYSMGGYAMGSAYLPPFITGYPSHCAIPMPFGASGPSFDGR--SSGASTG 482

Query: 1395 GGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIG 1574
              I     +Q L KF GQ G   Q    +P+ M + Q+   D+Y+ +   + ++  G +G
Sbjct: 483  ENIAHLGGLQQLGKFYGQQGLMFQPPYGNPLYMQYFQQPFGDAYSPTFQQNRMASSGALG 542

Query: 1575 GGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRA-VPNPAFYGSSSNMGFLMQYX 1751
            G +    +  ++S   Y   QK Q   +G+L +P   +  +   ++YG   +MG + Q+ 
Sbjct: 543  GQIDAFQQ--ESSFAAYKDDQKLQPPANGSLSMPSSGKVGITGSSYYGGPPSMGAMTQFP 600

Query: 1752 XXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASDKLSDIKC 1931
                                 R  D  +RFP   ++  ++G YSG Q Q  ++   + K 
Sbjct: 601  AGTLASPILPSSPVGGINHMGRRND--MRFPQTASR--NIGLYSGVQGQRGANSFDEPKR 656

Query: 1932 SSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPHA 2111
              FLEELK++  R+FELSDI GH+VEFS DQHGSRFIQQKLE  + E+K  VF+EVLPHA
Sbjct: 657  HYFLEELKSSNARKFELSDIAGHIVEFSVDQHGSRFIQQKLEHCSFEEKVSVFKEVLPHA 716

Query: 2112 SKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQ 2291
            SKLMTDVFGNYVIQKFFEHGS  QRKELA +LSG++L LSLQMYGCRV+QKALEV+++DQ
Sbjct: 717  SKLMTDVFGNYVIQKFFEHGSPDQRKELADKLSGQMLQLSLQMYGCRVIQKALEVIELDQ 776

Query: 2292 QMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRV 2471
            + QLV ELDGHV++CV DQNGNHVIQKCIECVPT  IEFIISAF GQV  L+THPYGCRV
Sbjct: 777  KTQLVQELDGHVLRCVHDQNGNHVIQKCIECVPTMNIEFIISAFQGQVAALATHPYGCRV 836

Query: 2472 IQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGK 2651
            IQR+LEHC++D ++  I++EILE    LA+DQYGNYV QHVLE G+P ERS II KL GK
Sbjct: 837  IQRVLEHCSDDLQSQCIVDEILESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGK 896

Query: 2652 VVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVL 2831
            +VQMSQHK+ASNV+EKCLE+G+  E+ELLI+E++G SEE +    MMKD FANYV+QK+L
Sbjct: 897  IVQMSQHKYASNVIEKCLEHGSPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKIL 956

Query: 2832 ETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKL 2945
            E  ND QR+ LL+ IR + +ALKKYTYGKHIVAR E+L
Sbjct: 957  EISNDKQREILLSRIRIHLHALKKYTYGKHIVARFEQL 994



 Score = 84.7 bits (208), Expect = 3e-13
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
 Frame = +3

Query: 1974 FELSDIIGHVVEFSGDQHGSRFIQQKLESATPE-DKELVFQEVLPHASKLMTDVFGNYVI 2150
            F +S   G V   +   +G R IQ+ LE  + +   + +  E+L  A  L  D +GNYV 
Sbjct: 815  FIISAFQGQVAALATHPYGCRVIQRVLEHCSDDLQSQCIVDEILESAYLLAQDQYGNYVT 874

Query: 2151 QKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGH-- 2324
            Q   E G   +R ++  +L+G+I+ +S   Y   V++K LE     +Q  L+ E+ G   
Sbjct: 875  QHVLERGKPYERSQIISKLTGKIVQMSQHKYASNVIEKCLEHGSPIEQELLIEEIIGQSE 934

Query: 2325 ----VIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEH 2492
                 +  ++DQ  N+V+QK +E    +Q E ++S     +  L  + YG  ++ R  + 
Sbjct: 935  ESDQFLTMMKDQFANYVVQKILEISNDKQREILLSRIRIHLHALKKYTYGKHIVARFEQL 994

Query: 2493 CTE 2501
            C E
Sbjct: 995  CGE 997


>gb|EMJ18811.1| hypothetical protein PRUPE_ppa016404mg, partial [Prunus persica]
          Length = 1011

 Score =  657 bits (1695), Expect = 0.0
 Identities = 432/996 (43%), Positives = 566/996 (56%), Gaps = 15/996 (1%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVS--GPNSTWESQTEKGNAEGVMFGSGPLSSSCHSRN 176
            RSGSAPP+ EGS +++  L   + S  G +ST  S             S P   + +  N
Sbjct: 59   RSGSAPPSMEGSFSSIENLLSQHNSRMGTSSTNLSSIVNNVEFDEHLRSDPAYLAYYLSN 118

Query: 177  QN-------PRLPKDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEPEEE 335
             N       P + ++  +    +GG+G  R                      HKE+P + 
Sbjct: 119  MNLNASLPPPLILRENHQMVRQIGGLGTNRRLPSLDDSSNGSLHLSQGSLSIHKEDPTDA 178

Query: 336  RSPVSNLIRQGSSDWADRGFEYFSGSSLGSRPKSLVDLIQEDFPRTPSPVYSLSR-SAIH 512
            RS  + + +   ++ +       + +SL S  KSLVDLIQ+DFPRTPSPVY+ S  S++ 
Sbjct: 179  RS--ATISKDNLAENSGAVMPVKNTASLASYNKSLVDLIQQDFPRTPSPVYNQSLPSSLG 236

Query: 513  TANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSN-SMHTVGAGSIDS 689
            T +E  D+    D             +K+ E   GS  ++  S TS+   H VG    D 
Sbjct: 237  TTDEQTDT----DVHSISPNASSLNKSKLPEPNAGS--TNDCSDTSSLDAHAVGYIPND- 289

Query: 690  SSLPVAVSAGEPGETKLSESANIAAGGSNVNPELDTVILSSANTSDASKLVDAFQSFNMS 869
              +P+A +   P       + N+    SN   E D  + ++A+ S    L       ++S
Sbjct: 290  --VPLATTT--PSIQHRDATGNLQQDESNF--EHDDGLGNNASISGELGL-------DLS 336

Query: 870  DMQGIN-NLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQGEVQFQGSAQALYQH 1046
             ++  N +++  KQ+E           Q+S+Q     +  L G Q ++  QG    L   
Sbjct: 337  RVRASNVDINNNKQNEKQSYGRYVPQDQLSTQQSVPYQ--LKGVQTQLVSQGMNH-LQSG 393

Query: 1047 YYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTNPHLYATAAAAYMTSGNPYYQNIQP 1226
               +PH  PK   SS  IQ       S   P     P LYAT AA YMTSGNP+Y N QP
Sbjct: 394  MENLPHGYPK--FSSIDIQP------SLHSP--GFTPPLYATTAA-YMTSGNPFYPNYQP 442

Query: 1227 AALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXXXSRSVNTAGGIE 1406
            + +F  QY  GGY +  T +   M GY + G+ P+              +  V+    I 
Sbjct: 443  SGIFPAQYGAGGYALGSTFLPSYMPGYASHGSFPMPFDATSGPSFNGRTA-DVSRGERIP 501

Query: 1407 MGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDPLSVRGFIGGGLG 1586
             G D+Q   +F GQ G  LQ   +DP+ M +  R +ED+Y  S     L+ R  IGG L 
Sbjct: 502  HGGDMQYPSRFYGQHGPMLQPPFSDPLNMQYYPRPLEDAYGASSQYGHLASR-VIGGQL- 559

Query: 1587 NNMEFHKASMVG--YAAQQKSQFVRSGNLGIPLVSRA-VPNPAFYGSSSNMGFLMQYXXX 1757
            +  E +  +  G  Y   Q  Q    GNLGIP   +  +    +YG++S M  + Q+   
Sbjct: 560  SQQELYSTAYTGDAYTGDQNFQSSSIGNLGIPSPRKVGINGSGYYGNNSTMPIMTQFPAS 619

Query: 1758 XXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASDKLSDIKCSS 1937
                               R  +  IRFP  +      G YSGWQ   +     D K  S
Sbjct: 620  PLGSPILPSSPMGRTNHLGRKNE--IRFPQGSIS----GVYSGWQGPRSFSS-DDPKRHS 672

Query: 1938 FLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVFQEVLPHASK 2117
            FLEELK +  R+FELSDI G +VEFS DQHGSRFIQQKLE  T EDK  VF+E+LP ASK
Sbjct: 673  FLEELKTSNPRKFELSDIAGRIVEFSVDQHGSRFIQQKLEYCTAEDKASVFKEILPRASK 732

Query: 2118 LMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQM 2297
            LMTDVFGNYVIQKFFE+GS ++RKELA QL+G++L LSLQMYGCRV+QKALEV+++DQ+ 
Sbjct: 733  LMTDVFGNYVIQKFFEYGSAEERKELADQLAGQMLPLSLQMYGCRVIQKALEVIELDQKT 792

Query: 2298 QLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQ 2477
            QLV ELDGHV+KCVRDQNGNHVIQKCIEC+PTE+I FIISAF GQV TLSTHPYGCRVIQ
Sbjct: 793  QLVHELDGHVLKCVRDQNGNHVIQKCIECIPTEKIGFIISAFRGQVSTLSTHPYGCRVIQ 852

Query: 2478 RILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVV 2657
            R+LEHC++D ++  I++EILE   +LA+DQYGNYV QHVLE G+P ERS II KL GK+V
Sbjct: 853  RVLEHCSDDIQSQSIVDEILESSYTLAQDQYGNYVTQHVLERGKPYERSQIISKLIGKIV 912

Query: 2658 QMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLET 2837
            Q+SQHK+ASNVVEKCLE+G+  ERELLI+E++G  EE+++L  MMKD FANYV+QKVLET
Sbjct: 913  QLSQHKYASNVVEKCLEHGDVAERELLIEEIIGQMEENDSLLPMMKDQFANYVVQKVLET 972

Query: 2838 CNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKL 2945
             ND QR+ LL  IR + +ALKKYTYGKHIV R E+L
Sbjct: 973  SNDRQRETLLNLIRVHIDALKKYTYGKHIVVRFEQL 1008



 Score =  112 bits (281), Expect = 9e-22
 Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 8/267 (2%)
 Frame = +3

Query: 2184 RKELAHQLSGRILNLSLQMYGCRVVQKALEVVDVDQQMQLVSELDGHVIKCVRDQNGNHV 2363
            RK     ++GRI+  S+  +G R +Q+ LE    + +  +  E+     K + D  GN+V
Sbjct: 683  RKFELSDIAGRIVEFSVDQHGSRFIQQKLEYCTAEDKASVFKEILPRASKLMTDVFGNYV 742

Query: 2364 IQKCIECVPTEQIEFIISAFYGQVVTLSTHPYGCRVIQRILEHCTEDQKNNGIMEEILEF 2543
            IQK  E    E+ + +     GQ++ LS   YGCRVIQ+ LE    DQK   ++ E+   
Sbjct: 743  IQKFFEYGSAEERKELADQLAGQMLPLSLQMYGCRVIQKALEVIELDQKTQ-LVHELDGH 801

Query: 2544 ICSLAEDQYGNYVAQHVLEHGRPKERSIIIQKLFGKVVQMSQHKFASNVVEKCLEY-GNS 2720
            +     DQ GN+V Q  +E    ++   II    G+V  +S H +   V+++ LE+  + 
Sbjct: 802  VLKCVRDQNGNHVIQKCIECIPTEKIGFIISAFRGQVSTLSTHPYGCRVIQRVLEHCSDD 861

Query: 2721 KERELLIDEMLGDSEEHENLQAMMKDPFANYVIQKVLETCNDLQRQKLLACIRENSNALK 2900
             + + ++DE+L      E+   + +D + NYV Q VLE     +R ++++ +      L 
Sbjct: 862  IQSQSIVDEIL------ESSYTLAQDQYGNYVTQHVLERGKPYERSQIISKLIGKIVQLS 915

Query: 2901 KYTYGKHIVAR-------AEKLISLEE 2960
            ++ Y  ++V +       AE+ + +EE
Sbjct: 916  QHKYASNVVEKCLEHGDVAERELLIEE 942


>ref|XP_006453301.1| hypothetical protein CICLE_v10007330mg [Citrus clementina]
            gi|568840551|ref|XP_006474230.1| PREDICTED: pumilio
            homolog 6, chloroplastic-like isoform X1 [Citrus
            sinensis] gi|568840553|ref|XP_006474231.1| PREDICTED:
            pumilio homolog 6, chloroplastic-like isoform X2 [Citrus
            sinensis] gi|557556527|gb|ESR66541.1| hypothetical
            protein CICLE_v10007330mg [Citrus clementina]
          Length = 983

 Score =  654 bits (1688), Expect = 0.0
 Identities = 410/1014 (40%), Positives = 553/1014 (54%), Gaps = 24/1014 (2%)
 Frame = +3

Query: 3    RSGSAPPTFEGSLAALGGLFPNYVSGP------------NSTWESQTEKGNAEGVMFGSG 146
            RSGSAPP  EGS  A+  L     S              NS  E + +        +GS 
Sbjct: 57   RSGSAPPNMEGSFLAIENLIARKSSSSGVNLANFNGNIRNSESEERLQANQTCLKYYGSN 116

Query: 147  PLSSSCHSRNQNPRLPKDFQRFGHHVGGMGDRRMXXXXXXXXXXXXXXXXXXXXTHKEEP 326
                     N NPRLP+      H +   G+RR                     THKEE 
Sbjct: 117  V--------NLNPRLPRHLD---HDLNRFGNRRGLTSLDNSSNCSVHVSQVTLSTHKEES 165

Query: 327  EEERSPVSNLIRQGSSDWADRGFEYFSGSS---LGSRPKSLVDLIQEDFPRTPSPVYSLS 497
            E++RSP     +  S +  DR   + SG+    +  + ++LVD+ QEDFPR+ SPVY+ S
Sbjct: 166  EDDRSP-----KHFSDEMVDRKNGFCSGNEAVKVAGQNRNLVDIKQEDFPRSSSPVYNQS 220

Query: 498  RSAIHTANEGADSNSSVDXXXXXXXXXXXXXAKVTELKDGSEISHTISATSNSMHTVGAG 677
             S  ++     DS+S                     L+D S IS    +T+   H  G  
Sbjct: 221  HSFGYS-----DSSS---------------------LRDPSVISSNGVSTTTGAHNTGVS 254

Query: 678  SIDSSSLPVAVSAGEPGETKLSESANIAAGGSNVNPEL---DTVILSSANTSDASKLVDA 848
            S    S    VS+     T    S       ++ + ++   D V+    + SD S ++  
Sbjct: 255  SKVDVSTAYNVSSSSHDWTATISSTPPTEEVTSNDTDIWTKDEVLDRDISHSDISVIISN 314

Query: 849  FQSFNM--SDMQGINNLSQLKQHEAPEGEGNSHCIQISSQHQGQQRVHLTGRQ-GEVQFQ 1019
             + FN   S++    N +QL  H            Q+ + H     + L G   G  QF 
Sbjct: 315  MKDFNTGHSNLGNQKNQAQLNVHSQVSSSS-----QVENAHSQVSSLGLIGTHIGMDQFH 369

Query: 1020 GSAQALYQHYYQIPHNQPKPNLSSNFIQTLPMAVQSTFQPVVSTN---PHLYATAAAAYM 1190
                          H   +P+              +  QPVV ++   P LYA+AAA YM
Sbjct: 370  --------------HGPSRPS--------------TAVQPVVQSSGFTPPLYASAAA-YM 400

Query: 1191 TSGNPYYQNIQPAALFAPQYSIGGYNINPTLISPLMSGYPAQGAMPVXXXXXXXXXXXXX 1370
             S NP+Y N+Q    ++PQY +GGY +N ++  PL++GYP  G + +             
Sbjct: 401  ASPNPFYSNVQAPGFYSPQYGVGGYVMNSSIGPPLVAGYPPHGGIAMVLDGSAGPSFHPQ 460

Query: 1371 XSRSVNTAGGIEMGADIQNLYKFGGQFGTTLQTHNTDPMQMHFLQRSVEDSYNVSMLSDP 1550
             S  V+T G +  G+D+Q L K  GQFG +LQ    +P+ + + Q+   ++YN+S   +P
Sbjct: 461  PS-GVSTGGSVVHGSDMQYLNKIYGQFGFSLQPSFANPLHLQYYQQPFGEAYNISGQFEP 519

Query: 1551 LSVRGFIGGGLGNNMEFHKASMVGYAAQQKSQFVRSGNLGIPLVSRAVPNPAFYGSSSNM 1730
            L  +G + G   N+ E  K S +  +  Q  Q  RSG    P  S+   +P   G+  NM
Sbjct: 520  LGSKGGVLGSHTNSHELKKGSDMAASDVQTFQHYRSGETENPSTSKVTVSPYHMGNPPNM 579

Query: 1731 GFLMQYXXXXXXXXXXXXXXXXXXXXXXRLTDQSIRFPMVTNKIASVGSYSGWQSQSASD 1910
            G  +                        R     +RF  V+N+      YSGWQ Q   +
Sbjct: 580  GMFVYPSSPLASPALPGSPVVGTGLLGGR---NEMRFSPVSNR------YSGWQGQRGFE 630

Query: 1911 KLSDIKCSSFLEELKNNRTRRFELSDIIGHVVEFSGDQHGSRFIQQKLESATPEDKELVF 2090
              +D K  +FLEELK+ + RRFELSDI GH+VEFS DQHGSRFIQQKLE+ + ++K  VF
Sbjct: 631  SYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVF 690

Query: 2091 QEVLPHASKLMTDVFGNYVIQKFFEHGSGQQRKELAHQLSGRILNLSLQMYGCRVVQKAL 2270
            +E+LPHASKLMTDVFGNYVIQKFFE+GS  QRKELA+QL G+IL LS+QMYGCRV+QKAL
Sbjct: 691  KEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKAL 750

Query: 2271 EVVDVDQQMQLVSELDGHVIKCVRDQNGNHVIQKCIECVPTEQIEFIISAFYGQVVTLST 2450
            E ++++Q+ QLV ELDG V++CVRDQNGNHVIQKCIEC+P E+I FIISAF GQV  LS 
Sbjct: 751  ETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSM 810

Query: 2451 HPYGCRVIQRILEHCTEDQKNNGIMEEILEFICSLAEDQYGNYVAQHVLEHGRPKERSII 2630
            HPYGCRVIQR+LEHC +  +   I++EIL+ +C+LA+DQYGNYV QHVL+ G+P ERS I
Sbjct: 811  HPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKI 870

Query: 2631 IQKLFGKVVQMSQHKFASNVVEKCLEYGNSKERELLIDEMLGDSEEHENLQAMMKDPFAN 2810
            I+KL G +VQ+SQHKFASNV+EKCL YG   EREL+I+E+LG +E  E L  MMKD FAN
Sbjct: 871  IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE--ETLLTMMKDQFAN 928

Query: 2811 YVIQKVLETCNDLQRQKLLACIRENSNALKKYTYGKHIVARAEKLISLEEKPLE 2972
            YV+QK+ E  ++ Q+  +L+ IR +++ LKKYTYGKHIVAR E LI  E +  E
Sbjct: 929  YVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQTSE 982