BLASTX nr result

ID: Ephedra28_contig00006072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00006072
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006420491.1| hypothetical protein CICLE_v10006739mg [Citr...    56   4e-06
gb|AGO32690.1| accelerated cell death 6 [Arabidopsis thaliana]         55   1e-05

>ref|XP_006420491.1| hypothetical protein CICLE_v10006739mg [Citrus clementina]
           gi|557522364|gb|ESR33731.1| hypothetical protein
           CICLE_v10006739mg [Citrus clementina]
          Length = 227

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
 Frame = +3

Query: 9   MDP--FEHLKKGDVDYFKGVPLDVLENSRDENNDTLFSKAAILKKLDCCREIYNR----- 167
           MDP  F+    G V+ FK +  +V+E+S      T+ +K  IL     C+E  N      
Sbjct: 25  MDPNLFKAAADGSVEPFKDMAREVIESSL-----TVHTKNTILHINIICQETENAPTKFV 79

Query: 168 ------CPSLIWHQNCFLNTALHHAIYYGASIQFVEFLIAAVTAESGGD------LESGQ 311
                 CP+L+   N   +T LH A  Y +    V  LI        GD      +E+ +
Sbjct: 80  EEILEICPALLLQVNAKGDTPLHLAAKY-SHFDIVRVLIERAQLAQHGDEEPENGVEAFR 138

Query: 312 KWLAIQNYERDTALHYAVTQRNIEATRILMEADSDH 419
           + + I N E++TALH AV+  N+E  +IL   D D+
Sbjct: 139 QMIRIVNNEKNTALHQAVSHGNVEVVKILTSEDPDY 174


>gb|AGO32690.1| accelerated cell death 6 [Arabidopsis thaliana]
          Length = 670

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = +3

Query: 75  LENSRDENNDTLFSKAAILKKLDCCREIYNRCPSLIWHQNCFLNTALHHAIYYGASIQFV 254
           +E  +    D++   AA    L+  +EI   CP L++ QN    T LH A + G   + V
Sbjct: 93  MERVKSNTGDSILHIAAKWGHLELVKEIVFECPCLLFEQNSSRQTPLHVAAH-GGHTKVV 151

Query: 255 EFLIAAVTAESGG---DLESGQKWLAIQNYERDTALHYAVTQRNIEATRILMEADSD 416
           E L+A+VT+ S     +    +    +++ + +TAL+YA+ +R +E    L+ AD D
Sbjct: 152 EALVASVTSASASLSTEESERRNPHVLKDEDGNTALYYAIERRYLETATCLVNADKD 208


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