BLASTX nr result

ID: Ephedra28_contig00005917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005917
         (1054 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23978.1| unknown [Picea sitchensis]                              70   1e-09

>gb|ABK23978.1| unknown [Picea sitchensis]
          Length = 114

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 43/114 (37%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
 Frame = -1

Query: 658 MEDAEQGISRNGKSLGPDQGKYTLLHGSEDD-LLDPDLRSALYDDPLXXXXXXXXXXXXX 482
           ME  E+G+     ++ PD+GKYTL+  + D+ L++P L   LYD+PL             
Sbjct: 1   MESMEKGVVHKETAVEPDEGKYTLIRSNSDEYLIEPYLYGGLYDEPLPCFGCGIGWFSFL 60

Query: 481 XXXXXXXXXXYATFLYFRNYSRKNPRERPGXXXXXXXXXXXXXXXXXITLGLVL 320
                     YA FLY R YSRKNPRERPG                 ITL LVL
Sbjct: 61  LGFVFPPLWYYAAFLYLRKYSRKNPRERPGLGASAIAALVCTVAAVIITLSLVL 114


Top