BLASTX nr result
ID: Ephedra28_contig00005903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005903
(1064 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 210 7e-52
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra... 209 1e-51
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra... 204 4e-50
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra... 204 4e-50
ref|XP_006432822.1| hypothetical protein CICLE_v10002300mg [Citr... 204 4e-50
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A... 204 4e-50
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 203 8e-50
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus... 197 6e-48
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 197 6e-48
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 197 8e-48
ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II tra... 196 1e-47
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 196 1e-47
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote... 196 2e-47
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra... 194 4e-47
gb|EMT10122.1| ATP-dependent DNA helicase Q1 [Aegilops tauschii] 192 2e-46
gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [... 192 2e-46
gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, ... 191 4e-46
ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like... 191 4e-46
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc... 191 4e-46
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra... 189 1e-45
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 210 bits (535), Expect = 7e-52
Identities = 120/255 (47%), Positives = 165/255 (64%), Gaps = 1/255 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++ E+DVTSHA ++V+ LQ++ DNDQR T+LQLV+ K K + +L DLK+
Sbjct: 482 CAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVDKVKNKHK-----ELGADLKR 536
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC-KGTRDNR 706
E++EQL+IQLILDNV KEEFQHTAY TNAYV G AK++LQG+KIVKL++ K +D +
Sbjct: 537 EEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISNKQNKDGK 596
Query: 705 QVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQ 526
+ KA + + SGL LD+LR ELS GI P++VLS+QQ++M+ QKP + E+
Sbjct: 597 --MNKAKRSLML---SGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNSTEE 651
Query: 525 VEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNA 346
+EKIIGK K +YG I+ I+KF +N +SD L + K
Sbjct: 652 LEKIIGKLKTERYGNRILEEIKKFAGSN------------ESDNGILNDEGSKRRPSKRL 699
Query: 345 KTKRAFMYVSSSDDE 301
KTK+ + + SSDDE
Sbjct: 700 KTKKDLVLIESSDDE 714
>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum tuberosum]
Length = 706
Score = 209 bits (533), Expect = 1e-51
Identities = 119/256 (46%), Positives = 171/256 (66%), Gaps = 2/256 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++EE+DV+SHA +V+ L+++Q+NDQR T+LQLVE K K + +L DLKK
Sbjct: 475 CAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVEKLKVKQK-----NLGPDLKK 529
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
+++EQL+I+L+LD+VLKEEFQHTAY TNAYV++G AK++LQG KI+K+++ TR +R
Sbjct: 530 DELEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEM--STRQSR- 586
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
+ + + ++GL LDELR EL+ GGIFP++VLSTQQI+ L QKP ++E++
Sbjct: 587 -TSSSMKSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLSTQQISTLSGQKPKSIEEL 645
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRD--KN 349
EKIIGK K KYG I +E+ +S +SDP S+ K + K
Sbjct: 646 EKIIGKLKTEKYGDRI---LEEIVS-------------YESDPQKDADGSKETKGNTVKK 689
Query: 348 AKTKRAFMYVSSSDDE 301
KTK+A + + SS+DE
Sbjct: 690 LKTKKALVVLESSEDE 705
>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Citrus sinensis]
Length = 567
Score = 204 bits (520), Expect = 4e-50
Identities = 110/256 (42%), Positives = 167/256 (65%), Gaps = 3/256 (1%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++ E+DVT HA +++ LQ++QDN+QR T+LQLV+ K K + ++ DLK+
Sbjct: 329 CAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLK-----EIDSDLKR 383
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC---KGTRD 712
E++EQL++QLI+D VL EEFQHTAY+TNAYV++G AK +LQG+KI+KL++ K T D
Sbjct: 384 EEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTAD 443
Query: 711 NRQVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTV 532
N++ K++ + ++ LDELR EL+ GGI P++VLS+Q I ++ +KP+T+
Sbjct: 444 NKKSTKRSLTSSALEFE------LDELRKELASISGGILPHSVLSSQLIRLISARKPSTM 497
Query: 531 EQVEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDK 352
E++EKIIGK K KYG I+ I K G SE+ ++ + E+ + + K
Sbjct: 498 EELEKIIGKLKTGKYGSRILEVISKC------GNSEQ---QHDNNAVSKEEQGRGARASK 548
Query: 351 NAKTKRAFMYVSSSDD 304
K ++A + V SSDD
Sbjct: 549 RTKKEKAVVVVDSSDD 564
>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Citrus sinensis]
Length = 715
Score = 204 bits (520), Expect = 4e-50
Identities = 110/256 (42%), Positives = 167/256 (65%), Gaps = 3/256 (1%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++ E+DVT HA +++ LQ++QDN+QR T+LQLV+ K K + ++ DLK+
Sbjct: 477 CAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLK-----EIDSDLKR 531
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC---KGTRD 712
E++EQL++QLI+D VL EEFQHTAY+TNAYV++G AK +LQG+KI+KL++ K T D
Sbjct: 532 EEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTAD 591
Query: 711 NRQVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTV 532
N++ K++ + ++ LDELR EL+ GGI P++VLS+Q I ++ +KP+T+
Sbjct: 592 NKKSTKRSLTSSALEFE------LDELRKELASISGGILPHSVLSSQLIRLISARKPSTM 645
Query: 531 EQVEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDK 352
E++EKIIGK K KYG I+ I K G SE+ ++ + E+ + + K
Sbjct: 646 EELEKIIGKLKTGKYGSRILEVISKC------GNSEQ---QHDNNAVSKEEQGRGARASK 696
Query: 351 NAKTKRAFMYVSSSDD 304
K ++A + V SSDD
Sbjct: 697 RTKKEKAVVVVDSSDD 712
>ref|XP_006432822.1| hypothetical protein CICLE_v10002300mg [Citrus clementina]
gi|557534944|gb|ESR46062.1| hypothetical protein
CICLE_v10002300mg [Citrus clementina]
Length = 243
Score = 204 bits (520), Expect = 4e-50
Identities = 110/256 (42%), Positives = 167/256 (65%), Gaps = 3/256 (1%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++ E+DVT HA +++ LQ++QDN+QR T+LQLV+ K K + ++ DLK+
Sbjct: 5 CAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVDKMKIKLK-----EIDSDLKR 59
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC---KGTRD 712
E++EQL++QLI+D VL EEFQHTAY+TNAYV++G AK +LQG+KI+KL++ K T D
Sbjct: 60 EEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTAD 119
Query: 711 NRQVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTV 532
N++ K++ + ++ LDELR EL+ GGI P++VLS+Q I ++ +KP+T+
Sbjct: 120 NKKSTKRSLTSSALEFE------LDELRKELASISGGILPHSVLSSQLIRLISARKPSTM 173
Query: 531 EQVEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDK 352
E++EKIIGK K KYG I+ I K G SE+ ++ + E+ + + K
Sbjct: 174 EELEKIIGKLKTGKYGSRILEVISKC------GNSEQ---QHDNNAVSKEEQGRGARASK 224
Query: 351 NAKTKRAFMYVSSSDD 304
K ++A + V SSDD
Sbjct: 225 RTKKEKAVVVVDSSDD 240
>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
gi|548857895|gb|ERN15693.1| hypothetical protein
AMTR_s00048p00224070 [Amborella trichopoda]
Length = 713
Score = 204 bits (520), Expect = 4e-50
Identities = 113/255 (44%), Positives = 163/255 (63%), Gaps = 1/255 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKD-VTDLSKDLK 886
CA + +E+D ++ A +V+ L+E+Q+NDQRAT+LQLV+ K R T DLK
Sbjct: 473 CAHPTETKEVDASTQAKIIVSLLKEMQENDQRATMLQLVDKLKVNSRGSGGATPTIPDLK 532
Query: 885 KEDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNR 706
+E++EQLI+QL+LD VLKEEFQHTAY+TNAYV++G K+L+QG+K+VKL++ +R +R
Sbjct: 533 REELEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKLEISVNSRGSR 592
Query: 705 QVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQ 526
+K +GL LD+ R ELS GGIFP+AVLSTQQI+ L ++P ++EQ
Sbjct: 593 TNIKAVKCKHL----AGLELKLDDFRKELSSCHGGIFPHAVLSTQQISTLSTERPDSLEQ 648
Query: 525 VEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNA 346
+EK+IGK K KYG+ I+ CI +++ T S K E S + K A
Sbjct: 649 LEKLIGKTKTEKYGERILDCIRQYVETEVPNGSVK------------EGDSIQHRPTKRA 696
Query: 345 KTKRAFMYVSSSDDE 301
KTK+A + + +S+DE
Sbjct: 697 KTKKALINIDTSEDE 711
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 203 bits (517), Expect = 8e-50
Identities = 114/255 (44%), Positives = 163/255 (63%), Gaps = 1/255 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+DV+ HA +V+ LQE+Q +DQR+T+LQLV+ K K + ++ DLK+
Sbjct: 476 CAFSSEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQLVDKMKVKQK-----EIGSDLKR 530
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQLI+ L+LD LKEEFQHTAY+TNAY+++G AK++LQG+K VKL++ +
Sbjct: 531 EEMEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEVSTEKKTKAS 590
Query: 702 V-LKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQ 526
V LK+ + SGL LDELR ELS GGI P++VLSTQQI++LC QKP ++EQ
Sbjct: 591 VRLKRCLGS------SGLELKLDELRKELSSIHGGILPHSVLSTQQISLLCSQKPNSLEQ 644
Query: 525 VEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNA 346
+EK+IGK K KYG +I+ I VK SD ++ + K +
Sbjct: 645 LEKVIGKLKTEKYGNKILEQI-----------------VKYSDFKPTDEQVSDGRAAKRS 687
Query: 345 KTKRAFMYVSSSDDE 301
KTK+ + + SS DE
Sbjct: 688 KTKKNLVLIESSGDE 702
>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 197 bits (501), Expect = 6e-48
Identities = 109/256 (42%), Positives = 162/256 (63%), Gaps = 2/256 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS++++EMDV+ HA +V+ LQ++Q NDQR+T+LQLV+ K K +++ +LK+
Sbjct: 473 CAFSREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQLVDKMKIKQKKQ-----GSELKR 527
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
ED EQLI+ L+L LKEEFQHTAY TNAY+++G AK++LQG+K V L++ R
Sbjct: 528 EDNEQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVTLEIYTEHRTKAA 587
Query: 702 V--LKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVE 529
+ +K++ ++ ++L LDELR ELS GGI P++VLST+QI++L QKP ++E
Sbjct: 588 LRSVKRSLESSDLELK------LDELRKELSSAHGGILPHSVLSTEQISLLSSQKPNSLE 641
Query: 528 QVEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKN 349
Q+EK+IGK K KYG I+ IEK+ SD +K + K
Sbjct: 642 QLEKVIGKLKTEKYGNRILQQIEKY-----------------SDSELTDKQETDGRAAKR 684
Query: 348 AKTKRAFMYVSSSDDE 301
+KTK+ + + SS+DE
Sbjct: 685 SKTKKNLVLIESSEDE 700
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 197 bits (501), Expect = 6e-48
Identities = 117/258 (45%), Positives = 166/258 (64%), Gaps = 4/258 (1%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++EE+DV+SHA +V+ L+++Q+NDQR T+LQLVE K K + +L DLKK
Sbjct: 475 CAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVEKLKVKQK-----NLGPDLKK 529
Query: 882 EDVEQLIIQLILDNVL-KEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNR 706
+++EQL+I+L+ +VL KEEFQHTAY TNAYV++G AK++LQG KI+K++L TR R
Sbjct: 530 DELEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEL--STRQTR 587
Query: 705 QVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQ 526
+ + + ++GL LDELR EL+ GGIFP++VLSTQQI+ L QKP ++E+
Sbjct: 588 T--SSSMKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVLSTQQISTLSAQKPKSIEE 645
Query: 525 VEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPA--NLEKSSQTPKRD- 355
+EKIIGK K KYG I+ I + +SDP N + S +T
Sbjct: 646 LEKIIGKLKTEKYGGRILEEIASY----------------ESDPQKNNADGSKETKGNTV 689
Query: 354 KNAKTKRAFMYVSSSDDE 301
K KTK+ + + SS+DE
Sbjct: 690 KKLKTKKTLVVLESSEDE 707
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
Length = 711
Score = 197 bits (500), Expect = 8e-48
Identities = 113/254 (44%), Positives = 163/254 (64%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+DV+ A ++++ LQ++QDNDQR T+LQ+V+ K K + DL DL+K
Sbjct: 475 CAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNK-----DLGSDLRK 529
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++E L+IQLI D VLKEEFQHTAY TNAYV+LG K++ G++IVKL++ +
Sbjct: 530 EEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTG 589
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
+K + + T +SGL LDELR ELS T GGIFP++VLSTQQI++L QKPT++ ++
Sbjct: 590 NMKSSKRSLT---SSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILEL 646
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNAK 343
E +IGK K KYG +I+ I K+ T E+ K+D E + K K
Sbjct: 647 ETMIGKLKTEKYGSKILEEIAKYTET------EQPENRLKTD----EGQGSENRAPKRLK 696
Query: 342 TKRAFMYVSSSDDE 301
+ +A + + SS DE
Sbjct: 697 SNKAVVLIESSGDE 710
>ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 237
Score = 196 bits (498), Expect = 1e-47
Identities = 112/254 (44%), Positives = 162/254 (63%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CA + +++E+DV SHA +++ LQ++Q ++Q+ T+LQLV+ KTK L DL+K
Sbjct: 5 CAVASEVKEVDVCSHARVIISILQDVQKSNQKMTMLQLVDKLKTKHN-----GLVSDLRK 59
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQLIIQL+LD VLKEEFQHTAY TNAYV++G A+++LQG+K+VK+++ +Q
Sbjct: 60 EEIEQLIIQLLLDRVLKEEFQHTAYATNAYVTVGPLARQVLQGKKVVKIEI-----SGKQ 114
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
+ + SGL LD+LR EL+ GGIFP++VLSTQQI +L QKPT+++Q+
Sbjct: 115 KVTGVKSKRKSVAPSGLECKLDKLRKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQL 174
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNAK 343
E +IGK KA KYG I+ IEK+ SE+ E ++TPKR K
Sbjct: 175 ETMIGKVKAEKYGDRILEEIEKWSIGQNPNASEE---------EQEEDENRTPKRPKTID 225
Query: 342 TKRAFMYVSSSDDE 301
T + + SSD+E
Sbjct: 226 T---HVVIESSDEE 236
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 196 bits (498), Expect = 1e-47
Identities = 110/257 (42%), Positives = 161/257 (62%), Gaps = 3/257 (1%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+DV+ A ++++ LQ++QDNDQR T+LQ+V+ K K + DL DL+K
Sbjct: 475 CAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKVKNK-----DLGSDLRK 529
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++E L+IQLI D VLKEEFQHTAY TNAYV+LG K++ G++IVKL++ +
Sbjct: 530 EEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKTG 589
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
+K + + T +SGL LDELR ELS T GGIFP++VLSTQQI++L QKPT++ +
Sbjct: 590 NMKSSKRSLT---SSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILEA 646
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANL---EKSSQTPKRDK 352
+ +IGK K KYG +I+ I K+ T P N+ ++ + K
Sbjct: 647 KTMIGKLKTEKYGSKILEEIAKYTET--------------EQPENVPPDDRQGSENRAPK 692
Query: 351 NAKTKRAFMYVSSSDDE 301
K+ +A + + SS DE
Sbjct: 693 RLKSNKAVVLIESSGDE 709
>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 196 bits (497), Expect = 2e-47
Identities = 109/254 (42%), Positives = 160/254 (62%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS ++ E+DV+ HA +V+ LQ++Q +DQR+T+LQLVE KTK + ++ LK+
Sbjct: 458 CAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKTKQK-----EIGSYLKR 512
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQLI+ L+L+ LKEEFQHTAY+TNAY+++G AK++LQG+K VKL++ +
Sbjct: 513 EEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEISTEEKTKAS 572
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
K + +SGL LDELR ELS GGI P++VLSTQQI++LC QKP ++E++
Sbjct: 573 ARLKRSLG-----SSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEEL 627
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNAK 343
EK IGK K KYG +I+ I VK SD ++ + K +K
Sbjct: 628 EKAIGKLKTEKYGNKILAQI-----------------VKYSDFELTDEQVNDGRAAKRSK 670
Query: 342 TKRAFMYVSSSDDE 301
TK+ + + +S+DE
Sbjct: 671 TKKNLVLIETSEDE 684
>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Fragaria vesca subsp. vesca]
Length = 708
Score = 194 bits (494), Expect = 4e-47
Identities = 111/254 (43%), Positives = 157/254 (61%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+DV+ HA +VT L+++Q+N+QR T+LQLV+ K K + K+V +LK+
Sbjct: 477 CAFSNEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQLVD--KIKIKHKEV---GSELKR 531
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQL+IQLIL VLKEEFQHTAY+TNAYV+LG AK++LQG+ VKL++ G +
Sbjct: 532 EEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGRSSVKLEMSTGQKKVAG 591
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
V +S L + LDELR ELS GGIFP++VLSTQQI+M+ QKP ++EQ+
Sbjct: 592 VRSVKRSR----ASSCLEQKLDELRKELSSDHGGIFPHSVLSTQQISMIDDQKPNSMEQL 647
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNAK 343
EKIIGK K KYG I+ + + P ++ +T +R
Sbjct: 648 EKIIGKVKTEKYGSRILEQVSMYADA--------------KQPVEDKEEQETERRSSKRL 693
Query: 342 TKRAFMYVSSSDDE 301
+ + SSDDE
Sbjct: 694 KNTEPLLIESSDDE 707
>gb|EMT10122.1| ATP-dependent DNA helicase Q1 [Aegilops tauschii]
Length = 278
Score = 192 bits (488), Expect = 2e-46
Identities = 112/254 (44%), Positives = 154/254 (60%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
C S +++++D T H +V+ LQE+Q NDQRATLLQLV+ +KTK + ++ + DLKK
Sbjct: 50 CVSSIELKDIDATYHTKIIVSLLQEMQQNDQRATLLQLVDKFKTKWKHSGCSNEAVDLKK 109
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQLI+QLILD VLKEEFQHTAYTTNAYV LG K LQG + VKL ++D+
Sbjct: 110 EEIEQLIVQLILDRVLKEEFQHTAYTTNAYVVLGPLWKPALQGNRPVKLTSAIHSQDSGD 169
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
K A NQ S L LD+LR +S GG+FP+AVLST+QI++L PTT+ ++
Sbjct: 170 RFKSAKRNQM----SNLEAKLDDLRRTISSRNGGVFPHAVLSTEQISLLNCHTPTTIAEL 225
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKRDKNAK 343
EK+IGK K KYG +I+ V +S+ + + S KR K K
Sbjct: 226 EKLIGKVKTDKYGSDIIE-------------------VMRSETGSGKDSGDGAKRQKKDK 266
Query: 342 TKRAFMYVSSSDDE 301
++V SS++E
Sbjct: 267 ---GVVFVESSEEE 277
>gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
Length = 308
Score = 192 bits (488), Expect = 2e-46
Identities = 112/255 (43%), Positives = 158/255 (61%), Gaps = 1/255 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+D + HA +++ LQ+ Q+NDQR T+LQLV+ K K + +L +LK+
Sbjct: 76 CAFSNEVKEVDASRHAKLIISLLQDTQENDQRLTVLQLVDKIKAKHK-----ELGSELKR 130
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQL+I+LILD LKEEFQHTAY+TNAYV++G A ++L G+ VKL++ G N+
Sbjct: 131 EEIEQLVIKLILDRSLKEEFQHTAYSTNAYVTIGPLANQVLHGKCSVKLEISSG--QNKV 188
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
K+ +SGL LDELR ELS GGIFP++VLSTQQI M+ QKP ++E +
Sbjct: 189 AGIKSVKRSCA--SSGLELKLDELRKELSSVHGGIFPHSVLSTQQINMISAQKPNSMELL 246
Query: 522 EKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANLEKSSQTPKR-DKNA 346
E IIGK KA KYG I+ NT+ S + P + ++ R K
Sbjct: 247 ENIIGKLKAEKYGSRIL------EQVNTYANS--------TQPEDAKEDQDIENRASKRL 292
Query: 345 KTKRAFMYVSSSDDE 301
K+K+ + V SSDDE
Sbjct: 293 KSKKHLVLVESSDDE 307
>gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 191 bits (485), Expect = 4e-46
Identities = 102/197 (51%), Positives = 134/197 (68%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
C S +++E+D T H +V+ L ++Q NDQRATLLQLV+ +K K + ++ S DLKK
Sbjct: 475 CTSSLELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFKAKWKDLGCSNESIDLKK 534
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E +EQL++QLILD VLKEEFQHTAY TNAYV+LG K LQG + VKL + ++D
Sbjct: 535 EGIEQLVVQLILDRVLKEEFQHTAYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKGS 594
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
K+ NQ S L LD+LR ELS + GG+FP+AVLS QQI++L QKPTTV ++
Sbjct: 595 GSKRTKRNQM----SNLEAKLDDLRRELSSSNGGVFPHAVLSAQQISLLNRQKPTTVAEL 650
Query: 522 EKIIGKRKAAKYGKEIV 472
EK+IGK K KYG I+
Sbjct: 651 EKLIGKVKTGKYGSAII 667
>ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 191 bits (485), Expect = 4e-46
Identities = 101/197 (51%), Positives = 136/197 (69%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CA S +++++D T H +V+ LQ++Q NDQRATLLQLV+ +KTK + ++ + DLKK
Sbjct: 475 CASSIELKDIDATYHTKIIVSLLQDMQHNDQRATLLQLVDKFKTKWKHSGCSNEAVDLKK 534
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQLI+QLI+D VLKEEFQHTAYTTNAYV+LG K LQG + VKL ++D
Sbjct: 535 EEIEQLIVQLIIDRVLKEEFQHTAYTTNAYVALGPLWKLALQGNRPVKLTGAIHSQDTGG 594
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQV 523
K +Q S L LD+LR +S GGIFP+AVLSTQQI++L KPTT+ ++
Sbjct: 595 ASKSTKRSQM----SNLEAKLDDLRRTISSDNGGIFPHAVLSTQQISLLSSHKPTTIAEL 650
Query: 522 EKIIGKRKAAKYGKEIV 472
E +IGK KA KYG +I+
Sbjct: 651 ENLIGKVKADKYGSDII 667
>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| DNA helicase family protein
[Populus trichocarpa]
Length = 718
Score = 191 bits (485), Expect = 4e-46
Identities = 110/260 (42%), Positives = 161/260 (61%), Gaps = 6/260 (2%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAF ++ E+DV+ HA +V+ LQ+ Q+ DQR T+LQLV+ K K +L D+KK
Sbjct: 479 CAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNK------KELGSDIKK 532
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLCKGTRDNRQ 703
E++EQL+IQLILD V KEE+QHTAY TNAYV++G A ++LQG+KIVKL++ ++
Sbjct: 533 EEMEQLVIQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSKQKNKGD 592
Query: 702 VLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVEQ- 526
+K A + SGL LDELR +LS GGIFP++VLS+QQ++M+ QKP++ ++
Sbjct: 593 SMKSAKHSLAF---SGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSAQEA 649
Query: 525 ----VEKIIGKRKAAKYGKEIVVCIEKFMSTNTHGTSEKWVCVKKSDPANL-EKSSQTPK 361
+EKIIGK K KYG +I+ I+K+ + + D L E+ +
Sbjct: 650 SPYHLEKIIGKLKTEKYGSKILDEIKKYTGS------------EPPDNGMLNEEEGSGNR 697
Query: 360 RDKNAKTKRAFMYVSSSDDE 301
K KTK+ + + SSD+E
Sbjct: 698 ASKRLKTKKGIVVIESSDEE 717
>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Glycine max]
Length = 690
Score = 189 bits (481), Expect = 1e-45
Identities = 100/205 (48%), Positives = 143/205 (69%), Gaps = 2/205 (0%)
Frame = -3
Query: 1062 CAFSKDIEEMDVTSHATSLVTFLQELQDNDQRATLLQLVENWKTKCRRKDVTDLSKDLKK 883
CAFS +++E+DV+ HA +V+ LQ++Q NDQR+T+LQLV+ K K + +L +LK+
Sbjct: 468 CAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVDKMKIKQK-----ELGSELKR 522
Query: 882 EDVEQLIIQLILDNVLKEEFQHTAYTTNAYVSLGSFAKRLLQGQKIVKLDLC--KGTRDN 709
E++EQLI+ L+L LKEEFQHT Y TNAY+++GS AK++LQG+K VKL++ + T+D
Sbjct: 523 EEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYTEQRTKDG 582
Query: 708 RQVLKKATDNQTMDLNSGLPRVLDELRNELSQTQGGIFPYAVLSTQQITMLCHQKPTTVE 529
+ K+ + SGL LDELR ELS GGI P++VLST+QI L QKP ++E
Sbjct: 583 VRSAKQCLGS------SGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSLE 636
Query: 528 QVEKIIGKRKAAKYGKEIVVCIEKF 454
Q+EK+IGK + KYG I+ IEK+
Sbjct: 637 QLEKLIGKLRTEKYGNRILKQIEKY 661