BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005546
         (550 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93050.1| Tetratricopeptide repeat-like superfamily protein...   110   3e-22
ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [S...   110   3e-22
ref|XP_004972659.1| PREDICTED: pentatricopeptide repeat-containi...   108   7e-22
ref|XP_006357891.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004243629.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|EXC08259.1| hypothetical protein L484_012716 [Morus notabilis]     107   2e-21
ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group] g...   106   4e-21
ref|XP_002298285.1| hypothetical protein POPTR_0001s22750g [Popu...   106   4e-21
gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indi...   106   4e-21
ref|XP_006468968.1| PREDICTED: pentatricopeptide repeat-containi...   105   6e-21
ref|XP_006446843.1| hypothetical protein CICLE_v10014674mg [Citr...   105   6e-21
ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containi...   105   7e-21
gb|AFW56940.1| plastid transcriptionally active 12-like protein ...   105   9e-21
ref|XP_004165731.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_006659201.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_006402731.1| hypothetical protein EUTSA_v10005856mg [Eutr...   103   4e-20
ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
ref|XP_006290805.1| hypothetical protein CARUB_v10016912mg [Caps...   102   6e-20
gb|EMJ18179.1| hypothetical protein PRUPE_ppa002772mg [Prunus pe...   102   6e-20

>gb|EOX93050.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 582

 Score =  110 bits (274), Expect = 3e-22
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++MK+IE  GSA TV+   R  +  LPR+L+LG L RFK  K W+YVSE++EWL+ Q 
Sbjct: 110 WRRLMKDIEDTGSASTVLRRQRTNEQYLPRDLVLGTLVRFKQMKKWQYVSEILEWLRAQS 169

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+F+ +D+ + + AYGKQG++ KAE+ +  M
Sbjct: 170 WWDFSEMDFIMLITAYGKQGDFNKAERIMSFM 201


>ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
           gi|241940341|gb|EES13486.1| hypothetical protein
           SORBIDRAFT_07g005470 [Sorghum bicolor]
          Length = 602

 Score =  110 bits (274), Expect = 3e-22
 Identities = 47/98 (47%), Positives = 67/98 (68%)
 Frame = -1

Query: 295 EIPDWRWRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVME 116
           E     WR+MM+EIE  GSAV ++   R GK PLPR+++LG L RFK  K W  VSE++E
Sbjct: 69  EAEQMNWRRMMREIEEAGSAVPILKTQRSGKGPLPRDVILGTLVRFKQLKKWNIVSEILE 128

Query: 115 WLKGQDWWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WL+ Q WW+F+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 129 WLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYM 166


>ref|XP_004972659.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Setaria italica]
          Length = 602

 Score =  108 bits (271), Expect = 7e-22
 Identities = 46/92 (50%), Positives = 66/92 (71%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR+MM+EIE  GSAV+++   R GK PLPR+++LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 74  WRRMMREIEEKGSAVSILKTQRSGKEPLPRDVILGTLVRFKQLKKWNIVSEILEWLRTQH 133

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+F  +D+ + + AYGK G++ +AE+ L  M
Sbjct: 134 WWDFTEMDFLMLVTAYGKLGDFSRAERVLKYM 165


>ref|XP_006357891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Solanum tuberosum]
          Length = 576

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/92 (52%), Positives = 63/92 (68%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WRKMM EIE  GSAV+V+   R     LP+ L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 76  WRKMMNEIEEAGSAVSVLRTQRDKNQALPKNLVLGSLVRFKQLKKWNLVSEILEWLRTQH 135

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+FN +D+ + + AYGKQG++ KAE+ L  M
Sbjct: 136 WWDFNEMDFLMLITAYGKQGDFSKAERILGYM 167


>ref|XP_004243629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Solanum lycopersicum]
          Length = 580

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/92 (52%), Positives = 63/92 (68%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WRKMM EIE  GSAV+V+   R     LP+ L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 76  WRKMMNEIEEAGSAVSVLRTQRDKNQALPKNLVLGSLVRFKQLKKWNLVSEILEWLRTQH 135

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+FN +D+ + + AYGKQG++ KAE+ L  M
Sbjct: 136 WWDFNEMDFLMLITAYGKQGDFSKAERILGYM 167


>gb|EXC08259.1| hypothetical protein L484_012716 [Morus notabilis]
          Length = 181

 Score =  107 bits (266), Expect = 2e-21
 Identities = 44/89 (49%), Positives = 64/89 (71%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M EIE  GSAV V+ + R+    +P++L+LG L RFK  K W+ VSE++EWL+ Q 
Sbjct: 31  WRRLMNEIEETGSAVAVLRSERMKNREIPKDLVLGTLVRFKQLKKWKLVSEILEWLRNQT 90

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTL 11
           WWNF  +DY + + AYGKQG++ +AE+ L
Sbjct: 91  WWNFGEMDYLMLITAYGKQGDFNRAEKVL 119


>ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
           gi|40253652|dbj|BAD05595.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza
           sativa Japonica Group] gi|125602452|gb|EAZ41777.1|
           hypothetical protein OsJ_26318 [Oryza sativa Japonica
           Group] gi|215695295|dbj|BAG90486.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215704436|dbj|BAG93870.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 609

 Score =  106 bits (264), Expect = 4e-21
 Identities = 46/92 (50%), Positives = 64/92 (69%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR MM+EIE  GSAV+++   R  K PLPR+ +LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 77  WRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLKKWNLVSEILEWLRTQH 136

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WWNF+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYM 168


>ref|XP_002298285.1| hypothetical protein POPTR_0001s22750g [Populus trichocarpa]
           gi|222845543|gb|EEE83090.1| hypothetical protein
           POPTR_0001s22750g [Populus trichocarpa]
          Length = 575

 Score =  106 bits (264), Expect = 4e-21
 Identities = 48/92 (52%), Positives = 65/92 (70%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++MK+IE  GSAV+V+   RI K  LPR+L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 51  WRRLMKQIEDTGSAVSVLRRERIKKDGLPRDLVLGTLVRFKQLKKWDLVSEILEWLQSQH 110

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+FN +D+ + + AYGK G++  AE  L SM
Sbjct: 111 WWDFNEMDFLMLITAYGKLGDFNGAEMVLRSM 142


>gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
          Length = 608

 Score =  106 bits (264), Expect = 4e-21
 Identities = 46/92 (50%), Positives = 64/92 (69%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR MM+EIE  GSAV+++   R  K PLPR+ +LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 77  WRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLKKWNLVSEILEWLRTQH 136

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WWNF+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYM 168


>ref|XP_006468968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Citrus sinensis]
          Length = 599

 Score =  105 bits (263), Expect = 6e-21
 Identities = 46/92 (50%), Positives = 64/92 (69%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M +IE  GSAV V+ + R    PLP++L+LG L R K  K W  VSEV+EWL+ Q 
Sbjct: 73  WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 132

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+FN +D+ + + AYGKQG++ KAE+ L  M
Sbjct: 133 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 164


>ref|XP_006446843.1| hypothetical protein CICLE_v10014674mg [Citrus clementina]
           gi|557549454|gb|ESR60083.1| hypothetical protein
           CICLE_v10014674mg [Citrus clementina]
          Length = 597

 Score =  105 bits (263), Expect = 6e-21
 Identities = 46/92 (50%), Positives = 64/92 (69%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M +IE  GSAV V+ + R    PLP++L+LG L R K  K W  VSEV+EWL+ Q 
Sbjct: 73  WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 132

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+FN +D+ + + AYGKQG++ KAE+ L  M
Sbjct: 133 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 164


>ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Brachypodium distachyon]
          Length = 606

 Score =  105 bits (262), Expect = 7e-21
 Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
 Frame = -1

Query: 433 SCKRLVKQVEFYGFCRRNSEC---FGTAR--REAVKAVVSDRGPSTRKPGIEIPDWRWRK 269
           SC  LV  V+     R    C   F T +  R+  + V +D     ++         WR+
Sbjct: 26  SCGSLVYNVKIKSNRRLEVVCQGMFATRKFVRKKKEEVFTDAADEAKQKN-------WRR 78

Query: 268 MMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQDWWN 89
           MM EIE  GSAV+++   R  K PLPR+ +LG L RFK  K W  VSE++EWL+ Q WW+
Sbjct: 79  MMNEIEESGSAVSILKTQRSTKEPLPRDAVLGTLVRFKQLKKWNLVSEILEWLRTQHWWD 138

Query: 88  FNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           F+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 139 FSEMDFLMLVTAYGKLGDFSRAERVLKYM 167


>gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
          Length = 600

 Score =  105 bits (261), Expect = 9e-21
 Identities = 46/98 (46%), Positives = 66/98 (67%)
 Frame = -1

Query: 295 EIPDWRWRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVME 116
           E     WR+MM+EIE  GSAV ++   R  K PLPR+++LG L RFK  K W  VSE++E
Sbjct: 69  ETEQMNWRRMMREIEQEGSAVPILKTQRNRKEPLPRDVILGTLIRFKQLKKWNIVSEILE 128

Query: 115 WLKGQDWWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WL+ Q WW+F+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 129 WLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYM 166


>ref|XP_004165731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like, partial [Cucumis sativus]
          Length = 303

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/92 (47%), Positives = 66/92 (71%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M EIE  GSAV+V+ + RI    +P++L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 73  WRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWLRTQS 132

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WWNF+ +D+ + + AYGK G++ +AE+ L+ M
Sbjct: 133 WWNFSEMDFVMLITAYGKLGDFNRAEKVLNLM 164


>ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Cucumis sativus]
          Length = 580

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/92 (47%), Positives = 66/92 (71%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M EIE  GSAV+V+ + RI    +P++L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 73  WRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWLRTQS 132

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WWNF+ +D+ + + AYGK G++ +AE+ L+ M
Sbjct: 133 WWNFSEMDFVMLITAYGKLGDFNRAEKVLNLM 164


>ref|XP_006659201.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like [Oryza brachyantha]
          Length = 610

 Score =  103 bits (257), Expect = 3e-20
 Identities = 45/92 (48%), Positives = 63/92 (68%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR MM+EIE  GSAV+++   R  K PLPR  +LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 79  WRLMMREIEESGSAVSILKTQRSKKEPLPRHAVLGTLVRFKQLKKWNLVSEILEWLRTQH 138

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+F+ +D+ + + AYGK G++ +AE+ L  M
Sbjct: 139 WWDFSEMDFLMLVTAYGKLGDFSRAERVLKYM 170


>ref|XP_006402731.1| hypothetical protein EUTSA_v10005856mg [Eutrema salsugineum]
           gi|557103830|gb|ESQ44184.1| hypothetical protein
           EUTSA_v10005856mg [Eutrema salsugineum]
          Length = 587

 Score =  103 bits (256), Expect = 4e-20
 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = -1

Query: 280 RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 104
           RWR +M EIES GSAV+V+   R  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72  RWRGLMLEIESTGSAVSVLRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 103 QDWWNFNRLDYNLFMLAYGKQGNYEKAEQTL 11
           Q+WWNF+ +D+ + + AYGK GN+  AE+ L
Sbjct: 132 QNWWNFSEMDFLMLITAYGKLGNFNGAERVL 162


>ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
           [Vitis vinifera] gi|302143502|emb|CBI22063.3| unnamed
           protein product [Vitis vinifera]
          Length = 548

 Score =  102 bits (255), Expect = 5e-20
 Identities = 46/93 (49%), Positives = 65/93 (69%)
 Frame = -1

Query: 280 RWRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQ 101
           +WR+MMKEIE  GSAV+V++        LPR+L+LG L RFK  K W  VSE++EWL+ Q
Sbjct: 77  KWRRMMKEIEEVGSAVSVLSTKN---QALPRDLVLGTLVRFKQLKKWSLVSEILEWLQTQ 133

Query: 100 DWWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
            WW+F+ +D+ + + AYGKQG++ KAE+    M
Sbjct: 134 PWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDM 166


>ref|XP_006290805.1| hypothetical protein CARUB_v10016912mg [Capsella rubella]
           gi|482559512|gb|EOA23703.1| hypothetical protein
           CARUB_v10016912mg [Capsella rubella]
          Length = 586

 Score =  102 bits (254), Expect = 6e-20
 Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = -1

Query: 280 RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 104
           RWR +M EIES GSAV V+   R  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72  RWRGLMLEIESTGSAVPVLRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 103 QDWWNFNRLDYNLFMLAYGKQGNYEKAEQTL 11
           Q+WWNF+ +D+ + + AYGK GN+  AE+ L
Sbjct: 132 QNWWNFSEMDFLMLITAYGKLGNFNGAERVL 162


>gb|EMJ18179.1| hypothetical protein PRUPE_ppa002772mg [Prunus persica]
          Length = 635

 Score =  102 bits (254), Expect = 6e-20
 Identities = 42/92 (45%), Positives = 67/92 (72%)
 Frame = -1

Query: 277 WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 98
           WR++M EIE  GSAV+V+ + R+    +P++L+LG L RFK  K W  VS+++EWL+ Q+
Sbjct: 73  WRRLMNEIEETGSAVSVLKSERLKDRTIPKDLVLGTLVRFKQLKKWNLVSQILEWLQTQN 132

Query: 97  WWNFNRLDYNLFMLAYGKQGNYEKAEQTLDSM 2
           WW+F+++D+ + + AYGKQG++  AE+ L  M
Sbjct: 133 WWDFSKMDFLMLITAYGKQGHFNGAEKVLSLM 164