BLASTX nr result
ID: Ephedra28_contig00005526
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005526
(477 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa] 81 2e-13
ref|XP_004137007.1| PREDICTED: protein TIC 62, chloroplastic-lik... 80 2e-13
ref|NP_188519.2| protein TIC 62 [Arabidopsis thaliana] gi|751518... 78 1e-12
dbj|BAB03098.1| unnamed protein product [Arabidopsis thaliana] 78 1e-12
gb|EXB41556.1| hypothetical protein L484_013631 [Morus notabilis] 77 2e-12
ref|XP_006590908.1| PREDICTED: protein TIC 62, chloroplastic-lik... 77 2e-12
ref|XP_006590906.1| PREDICTED: protein TIC 62, chloroplastic-lik... 77 2e-12
gb|ESW03860.1| hypothetical protein PHAVU_011G048000g [Phaseolus... 77 2e-12
ref|XP_006592114.1| PREDICTED: protein TIC 62, chloroplastic-lik... 76 5e-12
ref|XP_006479363.1| PREDICTED: protein TIC 62, chloroplastic-lik... 76 5e-12
ref|XP_006470896.1| PREDICTED: protein TIC 62, chloroplastic-lik... 76 5e-12
ref|XP_006423140.1| hypothetical protein CICLE_v10028081mg [Citr... 76 5e-12
ref|XP_003541088.1| PREDICTED: protein TIC 62, chloroplastic-lik... 76 5e-12
ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabido... 75 7e-12
ref|XP_006297181.1| hypothetical protein CARUB_v10013185mg [Caps... 75 1e-11
ref|XP_004166207.1| PREDICTED: uncharacterized protein LOC101225... 75 1e-11
ref|XP_006406552.1| hypothetical protein EUTSA_v10020309mg [Eutr... 74 2e-11
ref|XP_003576689.1| PREDICTED: uncharacterized protein LOC100834... 74 3e-11
ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso... 74 3e-11
emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera] 74 3e-11
>gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa]
Length = 624
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Frame = -3
Query: 340 NRYFRPSILSSETVKLKGK----LTLK-DEKGKLRNVQISATTSDSQNQPKDDQLVFVAG 176
NR R S L + + +K + L+L+ +KG ++ S + ++ K+ LVFVAG
Sbjct: 31 NRIVRFSGLKNHSDSIKSRSFFDLSLRASDKGPIKASSAVTDASPTNSESKEQDLVFVAG 90
Query: 175 ATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLN--ENFQNADKSTLV 17
ATGKVGSRTVRELLK GFRVRAG RS+ AK L++SV +N E Q +K +V
Sbjct: 91 ATGKVGSRTVRELLKLGFRVRAGVRSAQRAKGLVQSVKDMNTDEGTQPVEKLEVV 145
>ref|XP_004137007.1| PREDICTED: protein TIC 62, chloroplastic-like [Cucumis sativus]
Length = 579
Score = 80.5 bits (197), Expect = 2e-13
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 14/108 (12%)
Frame = -3
Query: 334 YFRPSILSSETVKLKGKLTLKDEKGKLR----NVQISATTSD----------SQNQPKDD 197
+ S+L+++ +KL K T G+L+ Q S++TS+ + K++
Sbjct: 58 FLEKSVLNAQPLKLSNKKTFP-LPGRLKFLHTRAQASSSTSNFSSGAAPTISKKEDSKNE 116
Query: 196 QLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLN 53
LVFVAGATGKVGSRTVRELLK GFRVRAG RSS A+ L+ESV ++N
Sbjct: 117 DLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSSQKAETLIESVKKIN 164
>ref|NP_188519.2| protein TIC 62 [Arabidopsis thaliana]
gi|75151827|sp|Q8H0U5.1|TIC62_ARATH RecName:
Full=Protein TIC 62, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 62; Short=AtTIC62; Flags: Precursor
gi|25083201|gb|AAN72050.1| Unknown protein [Arabidopsis
thaliana] gi|30725480|gb|AAP37762.1| At3g18890
[Arabidopsis thaliana] gi|332642643|gb|AEE76164.1|
protein TIC 62 [Arabidopsis thaliana]
Length = 641
Score = 77.8 bits (190), Expect = 1e-12
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = -3
Query: 340 NRYFRPSILSSETVKLKGK---LTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGAT 170
NR R S + +V K + L+L+ G +R + S + K++ LVFVAGAT
Sbjct: 32 NRIVRFSGFKNHSVSGKSRSFDLSLR-ASGPIRASSVVTEASPTNLNSKEEDLVFVAGAT 90
Query: 169 GKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKST 23
GKVGSRTVRELLK GFRVRAG RS+ A L++SV ++ QN D+ T
Sbjct: 91 GKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEM--KLQNTDEGT 137
>dbj|BAB03098.1| unnamed protein product [Arabidopsis thaliana]
Length = 649
Score = 77.8 bits (190), Expect = 1e-12
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = -3
Query: 340 NRYFRPSILSSETVKLKGK---LTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGAT 170
NR R S + +V K + L+L+ G +R + S + K++ LVFVAGAT
Sbjct: 32 NRIVRFSGFKNHSVSGKSRSFDLSLR-ASGPIRASSVVTEASPTNLNSKEEDLVFVAGAT 90
Query: 169 GKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKST 23
GKVGSRTVRELLK GFRVRAG RS+ A L++SV ++ QN D+ T
Sbjct: 91 GKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEM--KLQNTDEGT 137
>gb|EXB41556.1| hypothetical protein L484_013631 [Morus notabilis]
Length = 503
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = -3
Query: 205 KDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKS 26
KD+ L FVAGATG+VGSR VRELLK GFRVRAG RSS AK L+ESV QL + +NA
Sbjct: 80 KDENLAFVAGATGRVGSRAVRELLKLGFRVRAGVRSSDRAKALVESVKQLKLDNENAGGE 139
Query: 25 T 23
T
Sbjct: 140 T 140
>ref|XP_006590908.1| PREDICTED: protein TIC 62, chloroplastic-like isoform X3 [Glycine
max]
Length = 555
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/83 (51%), Positives = 53/83 (63%)
Frame = -3
Query: 304 TVKLKGKLTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNG 125
T K K + T G ++ +A + KDD LVFVAGATG+VGSRTVREL+K G
Sbjct: 76 TTKHKIRCTRAQASGSTKSCTGTAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLG 135
Query: 124 FRVRAGTRSSGNAKKLLESVTQL 56
FRVRAG RS+ A L++SV QL
Sbjct: 136 FRVRAGVRSAQRAGALVQSVEQL 158
>ref|XP_006590906.1| PREDICTED: protein TIC 62, chloroplastic-like isoform X1 [Glycine
max] gi|571488342|ref|XP_006590907.1| PREDICTED: protein
TIC 62, chloroplastic-like isoform X2 [Glycine max]
Length = 557
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/83 (51%), Positives = 53/83 (63%)
Frame = -3
Query: 304 TVKLKGKLTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNG 125
T K K + T G ++ +A + KDD LVFVAGATG+VGSRTVREL+K G
Sbjct: 76 TTKHKIRCTRAQASGSTKSCTGTAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLG 135
Query: 124 FRVRAGTRSSGNAKKLLESVTQL 56
FRVRAG RS+ A L++SV QL
Sbjct: 136 FRVRAGVRSAQRAGALVQSVEQL 158
>gb|ESW03860.1| hypothetical protein PHAVU_011G048000g [Phaseolus vulgaris]
gi|561004867|gb|ESW03861.1| hypothetical protein
PHAVU_011G048000g [Phaseolus vulgaris]
Length = 528
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = -3
Query: 313 SSETVKLKGKLTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELL 134
++ + K + + T G ++ +A + KDD LVFVAGATGKVGSRTVREL+
Sbjct: 42 TTRSTKHRIRCTKAQASGSTKSSVGTAEGISEKTDSKDDNLVFVAGATGKVGSRTVRELI 101
Query: 133 KNGFRVRAGTRSSGNAKKLLESVTQL 56
K GFRVRAG RS+ A L+ESV QL
Sbjct: 102 KLGFRVRAGVRSAQRAGALIESVQQL 127
>ref|XP_006592114.1| PREDICTED: protein TIC 62, chloroplastic-like isoform X3 [Glycine
max]
Length = 526
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = -3
Query: 313 SSETVKLKGKLTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELL 134
++ + K K T G ++ SA + KDD LVFVAGATG+VGSRTVREL+
Sbjct: 44 TTRSTKQKILCTRAQASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELI 103
Query: 133 KNGFRVRAGTRSSGNAKKLLESVTQL 56
K GFRVRAG RS+ A L++SV QL
Sbjct: 104 KLGFRVRAGVRSAQRAGALVQSVEQL 129
>ref|XP_006479363.1| PREDICTED: protein TIC 62, chloroplastic-like isoform X1 [Citrus
sinensis] gi|568851366|ref|XP_006479364.1| PREDICTED:
protein TIC 62, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 530
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = -3
Query: 247 VQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLES 68
V ++ T +DS KDD L FVAGATGKVGSRTVRELLK GFRVRAG RS A+ L++S
Sbjct: 68 VGVTPTKADS----KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
Query: 67 VTQLNENFQNADK 29
V Q+ + + A+K
Sbjct: 124 VKQMKLDGELANK 136
>ref|XP_006470896.1| PREDICTED: protein TIC 62, chloroplastic-like [Citrus sinensis]
Length = 368
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = -3
Query: 247 VQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLES 68
V ++ T +DS KDD L FVAGATGKVGSRTVRELLK GFRVRAG RS A+ L++S
Sbjct: 68 VGVTPTKADS----KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
Query: 67 VTQLNENFQNADK 29
V Q+ + + A+K
Sbjct: 124 VKQMKLDGELANK 136
>ref|XP_006423140.1| hypothetical protein CICLE_v10028081mg [Citrus clementina]
gi|557525074|gb|ESR36380.1| hypothetical protein
CICLE_v10028081mg [Citrus clementina]
Length = 585
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = -3
Query: 247 VQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLES 68
V ++ T +DS KDD L FVAGATGKVGSRTVRELLK GFRVRAG RS A+ L++S
Sbjct: 123 VGVTPTKADS----KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 178
Query: 67 VTQLNENFQNADK 29
V Q+ + + A+K
Sbjct: 179 VKQMKLDGELANK 191
>ref|XP_003541088.1| PREDICTED: protein TIC 62, chloroplastic-like isoform X1 [Glycine
max] gi|571492051|ref|XP_006592113.1| PREDICTED: protein
TIC 62, chloroplastic-like isoform X2 [Glycine max]
Length = 528
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = -3
Query: 313 SSETVKLKGKLTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELL 134
++ + K K T G ++ SA + KDD LVFVAGATG+VGSRTVREL+
Sbjct: 44 TTRSTKQKILCTRAQASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELI 103
Query: 133 KNGFRVRAGTRSSGNAKKLLESVTQL 56
K GFRVRAG RS+ A L++SV QL
Sbjct: 104 KLGFRVRAGVRSAQRAGALVQSVEQL 129
>ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata] gi|297328997|gb|EFH59416.1| catalytic/ coenzyme
binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 668
Score = 75.5 bits (184), Expect = 7e-12
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Frame = -3
Query: 340 NRYFRPSILSSETVKLKGK---LTLKDEKGKLRNVQISATTSDSQNQPKDDQLVFVAGAT 170
NR R S L + +V K + L+++ G +R + + K+D LVFVAGAT
Sbjct: 32 NRIVRFSGLKNHSVSGKSRSFDLSIR-ASGPIRASSAVTEANPANLNSKEDDLVFVAGAT 90
Query: 169 GKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADK 29
GKVGSRTVRELLK GFRVRAG RS+ A L++SV ++ QN D+
Sbjct: 91 GKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEM--KLQNTDE 135
>ref|XP_006297181.1| hypothetical protein CARUB_v10013185mg [Capsella rubella]
gi|482565890|gb|EOA30079.1| hypothetical protein
CARUB_v10013185mg [Capsella rubella]
Length = 643
Score = 74.7 bits (182), Expect = 1e-11
Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = -3
Query: 340 NRYFRPSILSSETVKLKGK---LTLK-DEKGKLRNVQISATTSDSQNQPKDDQLVFVAGA 173
NR R S L + + K + L+L+ G +R S + K++ LVFVAGA
Sbjct: 32 NRIVRLSALKNHSGLGKARSLDLSLRASASGPIRASSAVTEAIPSNSNAKEEDLVFVAGA 91
Query: 172 TGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQL-----NENFQNADKSTLV 17
TGKVGSRTVRELLK GFRVRAG RS+ A L++SV ++ NE Q +K +V
Sbjct: 92 TGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTNEGTQPVEKLEIV 148
>ref|XP_004166207.1| PREDICTED: uncharacterized protein LOC101225248 [Cucumis sativus]
Length = 503
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = -3
Query: 205 KDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLN 53
K++ LVFVAGATGKVGSRTVRELLK GFRVRAG RSS A+ L+ESV ++N
Sbjct: 110 KNEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSSQKAETLIESVKKIN 160
>ref|XP_006406552.1| hypothetical protein EUTSA_v10020309mg [Eutrema salsugineum]
gi|557107698|gb|ESQ48005.1| hypothetical protein
EUTSA_v10020309mg [Eutrema salsugineum]
Length = 619
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -3
Query: 205 KDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKS 26
K++ LVFVAGATGKVGSRTVRELLK GFRVRAG RS+ A L++SV ++ QN D+
Sbjct: 78 KEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAASLVQSVKEM--KLQNTDEG 135
Query: 25 T 23
T
Sbjct: 136 T 136
>ref|XP_003576689.1| PREDICTED: uncharacterized protein LOC100834133 [Brachypodium
distachyon]
Length = 475
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = -3
Query: 253 RNVQISATTSDSQNQPKDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLL 74
R ++ A + + KD LVFVAGATGKVGSRTVREL+K GFRVRA RS+ A L+
Sbjct: 60 RTARVYAAAAAADAPAKDQDLVFVAGATGKVGSRTVRELIKQGFRVRAAVRSAARATPLV 119
Query: 73 ESVTQL 56
+SV QL
Sbjct: 120 KSVEQL 125
>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
gi|297741413|emb|CBI32544.3| unnamed protein product
[Vitis vinifera]
Length = 529
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = -3
Query: 205 KDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKS 26
KD+ L FVAGATG+VGSRTVRELLK GFRVRAG R++ A+ L++SV Q+ + ++A +
Sbjct: 78 KDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEG 137
Query: 25 T 23
T
Sbjct: 138 T 138
>emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]
Length = 535
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = -3
Query: 205 KDDQLVFVAGATGKVGSRTVRELLKNGFRVRAGTRSSGNAKKLLESVTQLNENFQNADKS 26
KD+ L FVAGATG+VGSRTVRELLK GFRVRAG R++ A+ L++SV Q+ + ++A +
Sbjct: 78 KDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEG 137
Query: 25 T 23
T
Sbjct: 138 T 138