BLASTX nr result

ID: Ephedra28_contig00005483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005483
         (371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16330.1| unknown [Picea sitchensis] gi|224286087|gb|ACN407...    58   1e-06

>gb|ABR16330.1| unknown [Picea sitchensis] gi|224286087|gb|ACN40754.1| unknown
           [Picea sitchensis]
          Length = 210

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = -2

Query: 241 MTEKGTIKDCGQHGDRREWLRN---RCXXXXXXXXXXXXXXXXXXXXXLHPHKPRFYVQE 71
           M  KG  KDCG HG  R        RC                     LHPHKPRFYVQ+
Sbjct: 1   MQGKGGSKDCGNHGSPRLLPGRGFRRCMGSLFVLVVIALFVILVVYLVLHPHKPRFYVQD 60

Query: 70  ASVRSFNLTNGNLLSANLEFTII 2
           A+V   NLTNG LL+++L+F+I+
Sbjct: 61  ATVHQLNLTNG-LLTSSLQFSIV 82


Top