BLASTX nr result
ID: Ephedra28_contig00005342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005342
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD41573.1|AF056561_1 unknown [Brassica rapa] 99 6e-19
ref|NP_187727.1| fatty acid desaturase 7 [Arabidopsis thaliana] ... 98 1e-18
ref|XP_004514216.1| PREDICTED: omega-3 fatty acid desaturase, ch... 98 1e-18
ref|XP_006297665.1| hypothetical protein CARUB_v10013689mg [Caps... 98 1e-18
ref|XP_002882717.1| hypothetical protein ARALYDRAFT_478456 [Arab... 98 1e-18
gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp. pekin... 98 1e-18
gb|AAD41800.1|AF140053_1 unknown [Brassica napus] 98 1e-18
gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana]... 98 1e-18
gb|AAD41803.1|AF140059_1 fatty acid desaturase [Arabidopsis thal... 98 1e-18
sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desatur... 97 2e-18
ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, ch... 97 2e-18
ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citr... 97 2e-18
ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citr... 97 2e-18
ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citr... 97 2e-18
ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citr... 97 2e-18
ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citr... 97 2e-18
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var.... 97 2e-18
gb|ACS26171.1| chloroplast fatty acid desaturase 8 [Brassica napus] 97 2e-18
ref|XP_006407468.1| hypothetical protein EUTSA_v10020755mg [Eutr... 97 3e-18
gb|AAT02410.1| chloroplast omega-3 fatty acid desaturase [Brassi... 97 3e-18
>gb|AAD41573.1|AF056561_1 unknown [Brassica rapa]
Length = 163
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/104 (46%), Positives = 59/104 (56%)
Frame = +3
Query: 114 QTSHNRRGLLLSRNVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIP 293
Q+ + R L SRN A T + S+ FD GAPPPF+LADIRAAIP
Sbjct: 7 QSPSSPRFRLNSRNWALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIRAAIP 66
Query: 294 KHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
KHCWVKN WKS+SYV+RD+ +N+W WP+YW A
Sbjct: 67 KHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWIA 110
>ref|NP_187727.1| fatty acid desaturase 7 [Arabidopsis thaliana]
gi|1169599|sp|P46310.1|FAD3C_ARATH RecName: Full=Omega-3
fatty acid desaturase, chloroplastic; Flags: Precursor
gi|6016681|gb|AAF01508.1|AC009991_4 omega-3 fatty acid
desaturase, chloroplast precursor [Arabidopsis thaliana]
gi|12321881|gb|AAG50977.1|AC073395_19 omega-3 fatty acid
desaturase, chloroplast precursor; 37125-39292
[Arabidopsis thaliana] gi|408481|gb|AAA61773.1| omega-3
fatty acid desaturase [Arabidopsis thaliana]
gi|468434|dbj|BAA05040.1| plastid fatty acid desaturase
[Arabidopsis thaliana] gi|541653|dbj|BAA03106.1|
omega-3-desaturase [Arabidopsis thaliana]
gi|332641488|gb|AEE75009.1| fatty acid desaturase 7
[Arabidopsis thaliana]
Length = 446
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+TP T + S FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 65 NVSTPLTTPIFEESP-----LEEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLS 119
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 120 YVVRDVAIVFALAAGAAYLNNWIVWPLYWLA 150
>ref|XP_004514216.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Cicer
arietinum]
Length = 440
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD G+PPPFSLADIRAAIPKHCWVK++WKS+SYV+RDI+ +N+W WP+Y
Sbjct: 84 FDPGSPPPFSLADIRAAIPKHCWVKDSWKSMSYVLRDIVIVFGLAAAAAYLNNWMVWPLY 143
Query: 417 WAA 425
WAA
Sbjct: 144 WAA 146
>ref|XP_006297665.1| hypothetical protein CARUB_v10013689mg [Capsella rubella]
gi|482566374|gb|EOA30563.1| hypothetical protein
CARUB_v10013689mg [Capsella rubella]
Length = 449
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+ P T +V S FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 65 NVSVPLTTPIVDESP--LEGEHEEDKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMS 122
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 123 YVVRDVAIVFALAAGAAYLNNWIVWPLYWLA 153
>ref|XP_002882717.1| hypothetical protein ARALYDRAFT_478456 [Arabidopsis lyrata subsp.
lyrata] gi|297328557|gb|EFH58976.1| hypothetical protein
ARALYDRAFT_478456 [Arabidopsis lyrata subsp. lyrata]
Length = 446
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+TP T + S FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 62 NVSTPLTTPIFEESP--LEEEYKDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLS 119
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 120 YVVRDVAIVFALAAGAAYLNNWIVWPLYWLA 150
>gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp. pekinensis]
Length = 432
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/109 (46%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = +3
Query: 117 TSHNRRGLLLSR------NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADI 278
+S N R + L+R NVATP T T FD GAPPPF+LADI
Sbjct: 39 SSLNSRSVFLARTRNWALNVATPLT-------TLETPPEEEEDASRFDPGAPPPFNLADI 91
Query: 279 RAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
RAAIPKHCWVKN WKS+SYV+RD+ N W WP+YW A
Sbjct: 92 RAAIPKHCWVKNPWKSMSYVVRDVAIVFGLAAVAAYFNSWLLWPLYWFA 140
>gb|AAD41800.1|AF140053_1 unknown [Brassica napus]
Length = 157
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/104 (45%), Positives = 59/104 (56%)
Frame = +3
Query: 114 QTSHNRRGLLLSRNVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIP 293
Q+ + R L SRN A T + S+ FD GAPPPF+LADI+AAIP
Sbjct: 7 QSPSSPRFRLNSRNWALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIKAAIP 66
Query: 294 KHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
KHCWVKN WKS+SYV+RD+ +N+W WP+YW A
Sbjct: 67 KHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWIA 110
>gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana] gi|20908084|gb|AAM26725.1|
AT3g11170/F9F8_4 [Arabidopsis thaliana]
Length = 446
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+TP T + S FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 65 NVSTPLTTPIFEESP-----LEEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLS 119
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 120 YVVRDVAIVFALAAGAAYLNNWIVWPLYWLA 150
>gb|AAD41803.1|AF140059_1 fatty acid desaturase [Arabidopsis thaliana]
Length = 177
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+TP T + S FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 40 NVSTPLTTPIFEESP-----LEEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLS 94
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 95 YVVRDVAIVFALAAGAAYLNNWIVWPLYWLA 125
>sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags:
Precursor
Length = 404
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/104 (45%), Positives = 59/104 (56%)
Frame = +3
Query: 114 QTSHNRRGLLLSRNVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIP 293
Q+ + R L SRN A T + S+ FD GAPPPF+LADIRAAIP
Sbjct: 5 QSPSSPRFRLNSRNWALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIRAAIP 64
Query: 294 KHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
KHCWVKN WKS+SYV+R++ +N+W WP+YW A
Sbjct: 65 KHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIA 108
>ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
[Citrus sinensis]
Length = 457
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|567873645|ref|XP_006429412.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
gi|557531468|gb|ESR42651.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
gi|557531469|gb|ESR42652.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 354
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFALAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531467|gb|ESR42650.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 256
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFALAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531466|gb|ESR42649.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 457
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFALAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531465|gb|ESR42648.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 430
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFALAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531464|gb|ESR42647.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 334
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFALAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
Length = 457
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 237 FDAGAPPPFSLADIRAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVY 416
FD GAPPPF LADIRAAIPKHCWVK+ WKS+SYV+RD++ +N+W WP+Y
Sbjct: 101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLY 160
Query: 417 WAA 425
WAA
Sbjct: 161 WAA 163
>gb|ACS26171.1| chloroplast fatty acid desaturase 8 [Brassica napus]
Length = 432
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/109 (45%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = +3
Query: 117 TSHNRRGLLLSR------NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADI 278
+S N R + L+R NVA P T T FD GAPPPF+LADI
Sbjct: 39 SSLNSRSVFLARTRNWALNVAIPLT-------TLETPPEEEKDASRFDPGAPPPFNLADI 91
Query: 279 RAAIPKHCWVKNTWKSVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
RAAIPKHCWVKN WKS+SYV+RD++ N W WP+YW A
Sbjct: 92 RAAIPKHCWVKNPWKSMSYVVRDVVIVFGLAAVAAYFNSWLLWPLYWFA 140
>ref|XP_006407468.1| hypothetical protein EUTSA_v10020755mg [Eutrema salsugineum]
gi|557108614|gb|ESQ48921.1| hypothetical protein
EUTSA_v10020755mg [Eutrema salsugineum]
Length = 438
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 153 NVATPFT---DVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWK 323
NV+TP T + H T+ FD GAPPPF+LADIRAAIPKHCWVKN WK
Sbjct: 67 NVSTPLTVETPIEEEHETQR-----------FDPGAPPPFNLADIRAAIPKHCWVKNPWK 115
Query: 324 SVSYVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
S+SYV+RD+ +N+W WP+YW A
Sbjct: 116 SMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWLA 149
>gb|AAT02410.1| chloroplast omega-3 fatty acid desaturase [Brassica napus]
Length = 439
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +3
Query: 153 NVATPFTDVVVSHSTKXXXXXXXXXXXXFDAGAPPPFSLADIRAAIPKHCWVKNTWKSVS 332
NV+TP T S+ FD GAPPPF+LADIRAAIPKHCWVKN WKS+S
Sbjct: 57 NVSTPLT----VDSSSSPPIEEEPKTQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMS 112
Query: 333 YVIRDIIXXXXXXXXXXSINHWAFWPVYWAA 425
YV+RD+ +N+W WP+YW A
Sbjct: 113 YVVRDVAIVFALAAGAAYLNNWLVWPLYWIA 143