BLASTX nr result

ID: Ephedra28_contig00005277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005277
         (852 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17783.1| unknown [Picea sitchensis]                              59   2e-06
ref|XP_006856091.1| hypothetical protein AMTR_s00059p00128230 [A...    58   5e-06

>gb|ABR17783.1| unknown [Picea sitchensis]
          Length = 472

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 28/99 (28%)
 Frame = +3

Query: 636 AVKREELT------ESPSVKS-TSDEAPLLSKKNQQKYG--------------------E 734
           A+K++ LT      +SPS K    D+APLLSK  +                        +
Sbjct: 51  AIKQDSLTMKKIELDSPSSKFIVGDQAPLLSKSQKFPLSHEFEPSPSSDGEKKVDSFTVQ 110

Query: 735 GSG-ISLMGIEEMEVKYAAYVRHDAFGTFGRGPFPLKEK 848
           GS  +S   ++EME KYAA++RHD +GT GRGP PLKEK
Sbjct: 111 GSATVSSEALKEMEAKYAAFLRHDIYGTMGRGPLPLKEK 149


>ref|XP_006856091.1| hypothetical protein AMTR_s00059p00128230 [Amborella trichopoda]
           gi|548859950|gb|ERN17558.1| hypothetical protein
           AMTR_s00059p00128230 [Amborella trichopoda]
          Length = 394

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 33/71 (46%), Positives = 39/71 (54%)
 Frame = +3

Query: 639 VKREELTESPSVKSTSDEAPLLSKKNQQKYGEGSGISLMGIEEMEVKYAAYVRHDAFGTF 818
           +  E   ES    S  DE PLL          GS   +  + EME KYAAYVRHD +GT 
Sbjct: 14  ISAEPGDESHPESSRKDERPLLKI--------GSETVVYDLAEMEKKYAAYVRHDIYGTM 65

Query: 819 GRGPFPLKEKI 851
           G+GPFPL EK+
Sbjct: 66  GQGPFPLIEKL 76


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