BLASTX nr result
ID: Ephedra28_contig00005242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005242
(693 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76741.1| unknown [Picea sitchensis] 296 3e-78
gb|ADE75619.1| unknown [Picea sitchensis] 295 7e-78
ref|XP_006850847.1| hypothetical protein AMTR_s00025p00137110 [A... 282 6e-74
gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| T... 281 2e-73
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li... 280 2e-73
ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group] g... 280 4e-73
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li... 279 5e-73
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S... 279 7e-73
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li... 278 2e-72
ref|XP_006645919.1| PREDICTED: exosome complex component rrp4-li... 276 3e-72
gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu] 275 1e-71
gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii] 275 1e-71
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li... 275 1e-71
emb|CBI32318.3| unnamed protein product [Vitis vinifera] 275 1e-71
ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citr... 273 3e-71
gb|EEE55452.1| hypothetical protein OsJ_03610 [Oryza sativa Japo... 273 3e-71
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao] 273 4e-71
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t... 272 6e-71
gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus... 272 8e-71
ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-li... 271 1e-70
>gb|ADE76741.1| unknown [Picea sitchensis]
Length = 328
Score = 296 bits (759), Expect = 3e-78
Identities = 144/208 (69%), Positives = 174/208 (83%)
Frame = +3
Query: 57 CVNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDI 236
CVNV DTIP Q++ L+GHG DL+G++VA CGVVERVNKLVLVR+ R+RY+ E GDI
Sbjct: 35 CVNVSDTIPGYQEEGILKGHGTADLNGEVVATLCGVVERVNKLVLVRTLRARYKPENGDI 94
Query: 237 VVGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICA 416
VVGRV EVA KRW VDIN +Q A+LMLS+MN+PDG+QRRRTAVDEL+MR +F+ENDVICA
Sbjct: 95 VVGRVFEVASKRWLVDINFNQAALLMLSSMNLPDGIQRRRTAVDELSMRSMFEENDVICA 154
Query: 417 EVRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGY 596
EVRG D S+ LQARS+KYGKLE G L+T ++YL+KRRKQH+HHLE+YGVD+ILGLNGY
Sbjct: 155 EVRGFQHDGSLHLQARSLKYGKLENGQLITTSAYLVKRRKQHFHHLEQYGVDMILGLNGY 214
Query: 597 IWVGAHVDVPNSEIQGEDTDGLDQKHQS 680
IWVG H DVPN E QGE+ +G +Q +S
Sbjct: 215 IWVGVHTDVPNLEGQGEEENGSEQSTKS 242
>gb|ADE75619.1| unknown [Picea sitchensis]
Length = 328
Score = 295 bits (756), Expect = 7e-78
Identities = 144/208 (69%), Positives = 173/208 (83%)
Frame = +3
Query: 57 CVNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDI 236
CVNV DTIP Q++ L+GHG DL+G++VA CGVVERVNKLVLVR+ R RY+ E GDI
Sbjct: 35 CVNVSDTIPGYQEEGILKGHGTADLNGEVVATLCGVVERVNKLVLVRTLRVRYKPENGDI 94
Query: 237 VVGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICA 416
VVGRV EVA KRW VDIN +Q A+LMLS+MN+PDG+QRRRTAVDEL+MR +F+ENDVICA
Sbjct: 95 VVGRVFEVASKRWLVDINFNQAALLMLSSMNLPDGIQRRRTAVDELSMRSMFEENDVICA 154
Query: 417 EVRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGY 596
EVRG D S+ LQARS+KYGKLE G L+T ++YL+KRRKQH+HHLE+YGVD+ILGLNGY
Sbjct: 155 EVRGFQHDGSLHLQARSLKYGKLENGQLITTSAYLVKRRKQHFHHLEQYGVDMILGLNGY 214
Query: 597 IWVGAHVDVPNSEIQGEDTDGLDQKHQS 680
IWVG H DVPN E QGE+ +G +Q +S
Sbjct: 215 IWVGVHTDVPNLEGQGEEENGSEQSTKS 242
>ref|XP_006850847.1| hypothetical protein AMTR_s00025p00137110 [Amborella trichopoda]
gi|548854518|gb|ERN12428.1| hypothetical protein
AMTR_s00025p00137110 [Amborella trichopoda]
Length = 327
Score = 282 bits (722), Expect = 6e-74
Identities = 138/187 (73%), Positives = 161/187 (86%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+ +D L+GHG +L+G++VA CG VERVNKLVLVR R+RY+ E+GDIV
Sbjct: 33 VIVADTIPVNLEDNILKGHGTAELEGEVVATLCGAVERVNKLVLVRPFRARYKPEIGDIV 92
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIEVAPKRWR+DIN QDAILMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 93 VGRVIEVAPKRWRLDINFIQDAILMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE 152
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG+ D S+ LQARS KYGKLEKG LL+ + YL+KRRKQH+H+LE+YGVDLILG NGYI
Sbjct: 153 VRGSQNDGSLHLQARSQKYGKLEKGQLLSVSPYLVKRRKQHFHYLEQYGVDLILGCNGYI 212
Query: 600 WVGAHVD 620
WVGAH D
Sbjct: 213 WVGAHSD 219
>gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| TPA: hypothetical
protein ZEAMMB73_729707 [Zea mays]
Length = 319
Score = 281 bits (718), Expect = 2e-73
Identities = 135/188 (71%), Positives = 159/188 (84%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+Q+D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADTIPVNQEDNILKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LL A YL+KR+KQH+HHLEKY VDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSEKYGKLERGQLLMVAPYLVKRKKQHFHHLEKYNVDLILGCNGFI 215
Query: 600 WVGAHVDV 623
W G HV V
Sbjct: 216 WAGEHVVV 223
>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 319
Score = 280 bits (717), Expect = 2e-73
Identities = 135/204 (66%), Positives = 165/204 (80%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V D IPV+Q+D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADNIPVNQEDNILKGHGTSDHDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDV+CAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKL++G LLT +YL+KRRKQH+HHLE+Y VDLILG NG++
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVKRRKQHFHHLEQYDVDLILGCNGFV 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQK 671
WVG HV V + ED L +
Sbjct: 216 WVGQHVLVRENTESKEDKQKLSDE 239
>ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group]
gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza
sativa Japonica Group] gi|113564903|dbj|BAF15246.1|
Os04g0520000 [Oryza sativa Japonica Group]
gi|116310818|emb|CAH67607.1| OSIGBa0145G11.6 [Oryza
sativa Indica Group] gi|215736890|dbj|BAG95819.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|218195230|gb|EEC77657.1| hypothetical protein
OsI_16671 [Oryza sativa Indica Group]
Length = 315
Score = 280 bits (715), Expect = 4e-73
Identities = 136/204 (66%), Positives = 166/204 (81%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+ +D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 32 VTVADTIPVNDEDNILKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 91
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 92 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAE 151
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LL +YL+KRRKQH+HHLE+Y VDLILG NG+I
Sbjct: 152 VRGFQHDGSLHLQARSQKYGKLERGQLLVVPAYLVKRRKQHFHHLEQYDVDLILGCNGFI 211
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQK 671
WVG HV + GE+ + ++ K
Sbjct: 212 WVGEHV------VVGENANMMENK 229
>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
Length = 319
Score = 279 bits (714), Expect = 5e-73
Identities = 136/197 (69%), Positives = 161/197 (81%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+Q+D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADTIPVNQEDNILKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LLT YL+KR+KQH+HHL +Y VDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSEKYGKLERGQLLTVPPYLVKRKKQHFHHLAQYDVDLILGCNGFI 215
Query: 600 WVGAHVDVPNSEIQGED 650
WVG HV V ED
Sbjct: 216 WVGEHVVVDEKVKATED 232
>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
gi|241938452|gb|EES11597.1| hypothetical protein
SORBIDRAFT_06g031660 [Sorghum bicolor]
Length = 319
Score = 279 bits (713), Expect = 7e-73
Identities = 134/188 (71%), Positives = 159/188 (84%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+Q+D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADTIPVNQEDNILKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LL YL+KR+KQH+HHLE+Y VDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSEKYGKLERGQLLMVPPYLVKRKKQHFHHLEQYNVDLILGCNGFI 215
Query: 600 WVGAHVDV 623
WVG HV V
Sbjct: 216 WVGEHVVV 223
>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
Length = 327
Score = 278 bits (710), Expect = 2e-72
Identities = 143/224 (63%), Positives = 172/224 (76%), Gaps = 1/224 (0%)
Frame = +3
Query: 3 ERARETXXXXXXXXXXXXCVNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNK 182
ERA+E V V DTIP++ +D L+GHG DL+G++VA+ CGVVERVNK
Sbjct: 17 ERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNK 76
Query: 183 LVLVRSNRSRYRSEVGDIVVGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTA 362
L+ VR+ R+RY+ EVGDIVVGRV EVAPKRWR+DIN QDA+LMLS+MN+PDG+QRRRTA
Sbjct: 77 LIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTA 136
Query: 363 VDELNMRCIFQENDVICAEVRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQH 542
VDELNMR IF+ENDVICAEVRG D + LQARS KYGKLE+G LLT + YLIKRRKQH
Sbjct: 137 VDELNMRSIFEENDVICAEVRGLQHD-GLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH 195
Query: 543 YHHLEKYGVDLILGLNGYIWVGAHVDVPNSEIQGED-TDGLDQK 671
+HHLE+YG+DLILG NG+IW+G HVD + ED D +QK
Sbjct: 196 FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQK 239
>ref|XP_006645919.1| PREDICTED: exosome complex component rrp4-like [Oryza brachyantha]
Length = 319
Score = 276 bits (707), Expect = 3e-72
Identities = 133/188 (70%), Positives = 159/188 (84%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V+V DTIPV+ +D L+GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VSVADTIPVNDEDNILKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 96 VGRVIELAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LL +YL+KRRKQH+HHLE+Y DLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLERGQLLIVPAYLVKRRKQHFHHLEQYDADLILGCNGFI 215
Query: 600 WVGAHVDV 623
WVG HV V
Sbjct: 216 WVGEHVVV 223
>gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu]
Length = 326
Score = 275 bits (703), Expect = 1e-71
Identities = 134/207 (64%), Positives = 163/207 (78%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V D IPV+ +D L+GHG D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADNIPVNHEDNILKGHGTTDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDV+CAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRAIFEENDVVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKL++G LLT +YL+KRRK H+HHLE+Y VDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVKRRKLHFHHLEQYDVDLILGCNGFI 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQKHQS 680
WVG HV V ED L + ++
Sbjct: 216 WVGEHVVVREIADLKEDEQKLSAEAET 242
>gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii]
Length = 316
Score = 275 bits (702), Expect = 1e-71
Identities = 134/207 (64%), Positives = 163/207 (78%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V D IPV+ +D L+GHG D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 36 VTVADNIPVNHEDNILKGHGTTDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDV+CAE
Sbjct: 96 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKL++G LLT +YL+KRRK H+HHLE+Y VDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVKRRKLHFHHLEQYDVDLILGCNGFI 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQKHQS 680
WVG HV V ED L + ++
Sbjct: 216 WVGEHVVVREIADLKEDEQKLSAEAET 242
>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
Length = 330
Score = 275 bits (702), Expect = 1e-71
Identities = 133/203 (65%), Positives = 165/203 (81%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+ +D L+GHG DLDG++VA CGVVERVNKLV +R+ R+RY+ E GDI+
Sbjct: 36 VAVADTIPVNYEDGVLKGHGTLDLDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRV E+APKRWR+DIN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+END++CAE
Sbjct: 96 VGRVTEIAPKRWRLDINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G +LT + YL+KRRKQH H+LE++GVDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLERGQVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFI 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQ 668
WVG HV+ I+ + TD +Q
Sbjct: 216 WVGEHVEAKGILIE-DQTDKAEQ 237
>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 275 bits (702), Expect = 1e-71
Identities = 133/203 (65%), Positives = 165/203 (81%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+ +D L+GHG DLDG++VA CGVVERVNKLV +R+ R+RY+ E GDI+
Sbjct: 36 VAVADTIPVNYEDGVLKGHGTLDLDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDII 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRV E+APKRWR+DIN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+END++CAE
Sbjct: 96 VGRVTEIAPKRWRLDINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G +LT + YL+KRRKQH H+LE++GVDLILG NG+I
Sbjct: 156 VRGFQHDGSLHLQARSQKYGKLERGQVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFI 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQ 668
WVG HV+ I+ + TD +Q
Sbjct: 216 WVGEHVEAKGILIE-DQTDKAEQ 237
>ref|XP_006444154.1| hypothetical protein CICLE_v10021133mg [Citrus clementina]
gi|568852241|ref|XP_006479788.1| PREDICTED: exosome
complex component RRP4-like [Citrus sinensis]
gi|557546416|gb|ESR57394.1| hypothetical protein
CICLE_v10021133mg [Citrus clementina]
Length = 327
Score = 273 bits (699), Expect = 3e-71
Identities = 135/225 (60%), Positives = 170/225 (75%), Gaps = 2/225 (0%)
Frame = +3
Query: 3 ERARETXXXXXXXXXXXXCVNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNK 182
E+A E CV VGDTIPV +D L+GHG +D G+L A CGVVER+NK
Sbjct: 17 EKALERLESLSSKSNPNSCVTVGDTIPV-YEDGILKGHGTSDQKGELAATVCGVVERINK 75
Query: 183 LVLVRSNRSRYRSEVGDIVVGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTA 362
L+ VR+ R+RY+ E GDIV+GRVIEV PKRW+++IN QDAILMLS+MN+PDG+QRRRTA
Sbjct: 76 LIYVRALRARYKPETGDIVIGRVIEVVPKRWKLEINFTQDAILMLSSMNLPDGIQRRRTA 135
Query: 363 VDELNMRCIFQENDVICAEVRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQH 542
VDELNMR IF END++CAEVR + D S+QLQAR+ KYGKLE+G LLT YL+KRRKQH
Sbjct: 136 VDELNMRSIFTENDLVCAEVRSSQGDGSLQLQARNQKYGKLERGQLLTVDPYLVKRRKQH 195
Query: 543 YHHLEKYGVDLILGLNGYIWVGAHVDVPNSEI--QGEDTDGLDQK 671
+HHLE+YG+DLI+G NGYIW+G HV+ + + QG +++ L K
Sbjct: 196 FHHLEEYGIDLIIGCNGYIWIGEHVEARDKMVVDQGSNSEQLIAK 240
>gb|EEE55452.1| hypothetical protein OsJ_03610 [Oryza sativa Japonica Group]
Length = 428
Score = 273 bits (699), Expect = 3e-71
Identities = 133/204 (65%), Positives = 164/204 (80%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V +TIPV ++ +GHG +D DG++VA CGVVERVNKLV VR+ R+RY+ EVGDI+
Sbjct: 32 VTVAETIPVKDGEKIFKGHGTSDQDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDII 91
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+ENDVICAE
Sbjct: 92 VGRVIEIAPKRWRLEINFSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAE 151
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D S+ LQARS KYGKLE+G LL +YL+KRRKQH+HHLE+Y VDLILG NG+I
Sbjct: 152 VRGFQHDGSLHLQARSQKYGKLERGQLLVVPAYLVKRRKQHFHHLEQYDVDLILGCNGFI 211
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQK 671
WVG HV + GE+ + ++ K
Sbjct: 212 WVGEHV------VVGENANMMENK 229
>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
Length = 319
Score = 273 bits (698), Expect = 4e-71
Identities = 136/210 (64%), Positives = 167/210 (79%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V V DTIPV+ DD L+GHG +L+G+LVA CGVVERVNKLV VR+ R+RY+ EVGDIV
Sbjct: 36 VTVADTIPVNYDDAFLKGHGTTELNGELVATVCGVVERVNKLVYVRALRARYKPEVGDIV 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
VGRV+EVA KRWR++IN QDA+LMLS+MNMPDG+QRRRTA+DELNMR IF+ENDV+CAE
Sbjct: 96 VGRVVEVAQKRWRLEINFSQDAVLMLSSMNMPDGIQRRRTALDELNMRSIFEENDVVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VR + D SVQLQARS KYGKLEKG LL YL+K+ KQH+H+LE++G+DLILG NG+I
Sbjct: 156 VRNFHHDGSVQLQARSQKYGKLEKGQLLIIDPYLVKKSKQHFHYLEQFGIDLILGRNGFI 215
Query: 600 WVGAHVDVPNSEIQGEDTDGLDQKHQSAQN 689
WVG HV+ + I +DQ + S Q+
Sbjct: 216 WVGEHVEARDGMI-------VDQANNSEQS 238
>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
gi|217074186|gb|ACJ85453.1| unknown [Medicago
truncatula] gi|355510788|gb|AES91930.1| Exosome complex
exonuclease RRP4 [Medicago truncatula]
gi|388516977|gb|AFK46550.1| unknown [Medicago
truncatula]
Length = 327
Score = 272 bits (696), Expect = 6e-71
Identities = 133/196 (67%), Positives = 160/196 (81%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V + D+IPV+ +D L+GHG DLDG++VA CGVVERVNKLV VR+ RSRY+ EVGDIV
Sbjct: 36 VTIADSIPVNHEDGVLKGHGTADLDGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIV 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
+GRVIEVA KRWR+DIN Q+A LMLSAMNMPDGVQRRRTA+DELNMRCIF+E DVICAE
Sbjct: 96 IGRVIEVAQKRWRLDINYSQNAYLMLSAMNMPDGVQRRRTALDELNMRCIFEEADVICAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D + LQARS KYGKL G LLT YL+KR+KQH+HHLE+YG+DLI+G NG+I
Sbjct: 156 VRGFQHD-GLHLQARSQKYGKLSTGQLLTVTPYLVKRQKQHFHHLEQYGIDLIIGCNGFI 214
Query: 600 WVGAHVDVPNSEIQGE 647
WVG HV+V + ++ +
Sbjct: 215 WVGEHVEVRDDMVEDQ 230
>gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus vulgaris]
Length = 325
Score = 272 bits (695), Expect = 8e-71
Identities = 128/196 (65%), Positives = 163/196 (83%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRSRYRSEVGDIV 239
V + D+IPV+ +D L+GHG DL+G++VA CGVVERVNKLV VRS RSRY+ EVGDIV
Sbjct: 36 VIIADSIPVNHEDGVLKGHGTADLNGEVVATVCGVVERVNKLVYVRSLRSRYKPEVGDIV 95
Query: 240 VGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQENDVICAE 419
+GRV+EVA KRWR+DIN +QDA+LMLS+MNMPDGVQRRRTA+DELNMRCIF+ENDV+CAE
Sbjct: 96 IGRVVEVAQKRWRLDINFNQDAVLMLSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAE 155
Query: 420 VRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLILGLNGYI 599
VRG D + LQARS KYGKL +G LL+ YL+KR+KQH+HHLE++G+DLI+G NG+I
Sbjct: 156 VRGFQHD-GLHLQARSRKYGKLNRGQLLSVPPYLVKRQKQHFHHLEEFGIDLIIGCNGFI 214
Query: 600 WVGAHVDVPNSEIQGE 647
WVG H++ + ++ +
Sbjct: 215 WVGEHIEAKDDMVEDQ 230
>ref|XP_003580149.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 325
Score = 271 bits (693), Expect = 1e-70
Identities = 136/210 (64%), Positives = 164/210 (78%), Gaps = 6/210 (2%)
Frame = +3
Query: 60 VNVGDTIPVDQDDQSLRGHGINDLDGQLVANSCGVVERVNKLVLVRSNRS------RYRS 221
V V D+IPV+Q+D L+GHG D DG++VA CGVVERVNKLV VR+ R RY+
Sbjct: 36 VTVADSIPVNQEDNILKGHGAADHDGEVVATLCGVVERVNKLVYVRTLRRGILSLFRYKP 95
Query: 222 EVGDIVVGRVIEVAPKRWRVDINCHQDAILMLSAMNMPDGVQRRRTAVDELNMRCIFQEN 401
EVGDI+VGRVIE+APKRWR++IN QDA+LMLS+MN+PDG+QRRRTAVDELNMR IF+EN
Sbjct: 96 EVGDIIVGRVIEIAPKRWRLEINFTQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEN 155
Query: 402 DVICAEVRGTNIDQSVQLQARSIKYGKLEKGLLLTAASYLIKRRKQHYHHLEKYGVDLIL 581
DV+CAEVRG D S+ LQARS KYGKL++G LLT +YL+KRRKQH+HHLE+Y VDLIL
Sbjct: 156 DVVCAEVRGFQHDGSLHLQARSQKYGKLQRGQLLTVPAYLVKRRKQHFHHLEQYDVDLIL 215
Query: 582 GLNGYIWVGAHVDVPNSEIQGEDTDGLDQK 671
G NG+IWVG HV V + ED L +
Sbjct: 216 GCNGFIWVGQHVLVRENTELKEDQHKLSDE 245