BLASTX nr result
ID: Ephedra28_contig00005180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005180
(461 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc... 82 7e-14
gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [The... 80 2e-13
gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [The... 80 2e-13
gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [The... 80 2e-13
gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlis... 80 3e-13
ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2,... 79 5e-13
gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus pe... 79 5e-13
emb|CBI23954.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,... 79 5e-13
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch... 78 1e-12
gb|ABR17785.1| unknown [Picea sitchensis] 77 3e-12
ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Popu... 76 5e-12
ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2,... 76 5e-12
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 76 5e-12
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 76 5e-12
ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ri... 76 5e-12
gb|AFK35529.1| unknown [Lotus japonicus] 75 9e-12
sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta c... 75 1e-11
ref|XP_006659804.1| PREDICTED: tryptophan synthase beta chain 1-... 75 1e-11
gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus... 75 1e-11
>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
Length = 474
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+LADGT+VVLNCSGRGDKDVHTAIKH
Sbjct: 432 ETSHALAYLEKLCPTLADGTRVVLNCSGRGDKDVHTAIKH 471
>gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [Theobroma cacao]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464
>gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [Theobroma cacao]
Length = 471
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464
>gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [Theobroma cacao]
Length = 479
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464
>gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlisea aurea]
Length = 399
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LE LCPSL DGTKVVLNCSGRGDKDVHTAIKH
Sbjct: 357 ETSHALAYLETLCPSLPDGTKVVLNCSGRGDKDVHTAIKH 396
>ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 411
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DG KVVLNCSGRGDKDVHTAIKH
Sbjct: 369 ETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKH 408
>gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus persica]
Length = 470
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DG KVVLNCSGRGDKDVHTAIKH
Sbjct: 428 ETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKH 467
>emb|CBI23954.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 365 ETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 404
>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
vinifera]
Length = 458
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 416 ETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 455
>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
synthase beta subunit [Camptotheca acuminata]
gi|2801771|gb|AAB97526.1| tryptophan synthase beta
[Camptotheca acuminata]
Length = 466
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 424 ETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 463
>gb|ABR17785.1| unknown [Picea sitchensis]
Length = 496
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV T IKH
Sbjct: 454 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTVIKH 493
>ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Populus trichocarpa]
gi|550328353|gb|EEE98195.2| hypothetical protein
POPTR_0011s13930g [Populus trichocarpa]
Length = 472
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469
>ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum lycopersicum]
Length = 456
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+LA+GTKVVLNCSGRGDKDV TAIK+
Sbjct: 414 ETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKY 453
>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469
>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469
>ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ricinus communis]
gi|223537819|gb|EEF39437.1| tryptophan synthase beta
chain, putative [Ricinus communis]
Length = 394
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
ETSHALA+LEKLCP+LA+GTKVVLNCSGRGDKDV TAIK+
Sbjct: 352 ETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKY 391
>gb|AFK35529.1| unknown [Lotus japonicus]
Length = 417
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
ETSHALA+LEKLCP+L +GTKVV+NCSGRGDKDV TA K+FN
Sbjct: 375 ETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKYFN 416
>sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
AltName: Full=Orange pericarp 2; Flags: Precursor
gi|168574|gb|AAA33491.1| tryptophan synthase
beta-subunit, partial [Zea mays]
Length = 443
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
ETSHALA+LEKLCP+LADG +VV+NCSGRGDKDVHTA K+ +
Sbjct: 401 ETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLD 442
>ref|XP_006659804.1| PREDICTED: tryptophan synthase beta chain 1-like [Oryza
brachyantha]
Length = 370
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
ETSHALA+LEKLCP+L DGT+VV+NCSGRGDKDVHTA K+ +
Sbjct: 328 ETSHALAYLEKLCPTLPDGTRVVVNCSGRGDKDVHTASKYLD 369
>gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus vulgaris]
Length = 408
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = -2
Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
ETSHALA+LEKLCP+L +GTKVV+NCSGRGDKDV TA+K+ N
Sbjct: 366 ETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAVKYLN 407