BLASTX nr result

ID: Ephedra28_contig00005180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005180
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...    82   7e-14
gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [The...    80   2e-13
gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [The...    80   2e-13
gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [The...    80   2e-13
gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlis...    80   3e-13
ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2,...    79   5e-13
gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus pe...    79   5e-13
emb|CBI23954.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,...    79   5e-13
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...    78   1e-12
gb|ABR17785.1| unknown [Picea sitchensis]                              77   3e-12
ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Popu...    76   5e-12
ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2,...    76   5e-12
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...    76   5e-12
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,...    76   5e-12
ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ri...    76   5e-12
gb|AFK35529.1| unknown [Lotus japonicus]                               75   9e-12
sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta c...    75   1e-11
ref|XP_006659804.1| PREDICTED: tryptophan synthase beta chain 1-...    75   1e-11
gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus...    75   1e-11

>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+LADGT+VVLNCSGRGDKDVHTAIKH
Sbjct: 432 ETSHALAYLEKLCPTLADGTRVVLNCSGRGDKDVHTAIKH 471


>gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [Theobroma cacao]
          Length = 467

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464


>gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [Theobroma cacao]
          Length = 471

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464


>gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [Theobroma cacao]
          Length = 479

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVV+NCSGRGDKDVHTAIKH
Sbjct: 425 ETSHALAYLEKLCPTLPDGTKVVINCSGRGDKDVHTAIKH 464


>gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlisea aurea]
          Length = 399

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LE LCPSL DGTKVVLNCSGRGDKDVHTAIKH
Sbjct: 357 ETSHALAYLETLCPSLPDGTKVVLNCSGRGDKDVHTAIKH 396


>ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 411

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DG KVVLNCSGRGDKDVHTAIKH
Sbjct: 369 ETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKH 408


>gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus persica]
          Length = 470

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DG KVVLNCSGRGDKDVHTAIKH
Sbjct: 428 ETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKH 467


>emb|CBI23954.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 365 ETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 404


>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
           vinifera]
          Length = 458

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 416 ETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 455


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
           synthase beta subunit [Camptotheca acuminata]
           gi|2801771|gb|AAB97526.1| tryptophan synthase beta
           [Camptotheca acuminata]
          Length = 466

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA LEKLCP+L +GTKVVLNCSGRGDKDVHTAIKH
Sbjct: 424 ETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 463


>gb|ABR17785.1| unknown [Picea sitchensis]
          Length = 496

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV T IKH
Sbjct: 454 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTVIKH 493


>ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Populus trichocarpa]
           gi|550328353|gb|EEE98195.2| hypothetical protein
           POPTR_0011s13930g [Populus trichocarpa]
          Length = 472

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469


>ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Solanum lycopersicum]
          Length = 456

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+LA+GTKVVLNCSGRGDKDV TAIK+
Sbjct: 414 ETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKY 453


>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469


>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+L DGTKVVLNCSGRGDKDV TAIK+
Sbjct: 430 ETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469


>ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223537819|gb|EEF39437.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 394

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKH 341
           ETSHALA+LEKLCP+LA+GTKVVLNCSGRGDKDV TAIK+
Sbjct: 352 ETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKY 391


>gb|AFK35529.1| unknown [Lotus japonicus]
          Length = 417

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
           ETSHALA+LEKLCP+L +GTKVV+NCSGRGDKDV TA K+FN
Sbjct: 375 ETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKYFN 416


>sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           AltName: Full=Orange pericarp 2; Flags: Precursor
           gi|168574|gb|AAA33491.1| tryptophan synthase
           beta-subunit, partial [Zea mays]
          Length = 443

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
           ETSHALA+LEKLCP+LADG +VV+NCSGRGDKDVHTA K+ +
Sbjct: 401 ETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLD 442


>ref|XP_006659804.1| PREDICTED: tryptophan synthase beta chain 1-like [Oryza
           brachyantha]
          Length = 370

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
           ETSHALA+LEKLCP+L DGT+VV+NCSGRGDKDVHTA K+ +
Sbjct: 328 ETSHALAYLEKLCPTLPDGTRVVVNCSGRGDKDVHTASKYLD 369


>gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus vulgaris]
          Length = 408

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = -2

Query: 460 ETSHALAHLEKLCPSLADGTKVVLNCSGRGDKDVHTAIKHFN 335
           ETSHALA+LEKLCP+L +GTKVV+NCSGRGDKDV TA+K+ N
Sbjct: 366 ETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAVKYLN 407


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