BLASTX nr result

ID: Ephedra28_contig00005132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00005132
         (545 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL32616.1| SCARECROW gene regulator [Arabidopsis thaliana] g...    58   2e-06
ref|NP_201478.1| GRAS family transcription factor [Arabidopsis t...    58   2e-06
ref|XP_004143507.1| PREDICTED: scarecrow-like protein 4-like [Cu...    57   3e-06
emb|CBI17529.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vi...    57   3e-06
emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera]    56   5e-06
gb|ADL36819.1| SCL domain class transcription factor [Malus dome...    56   6e-06
ref|XP_001755257.1| predicted protein [Physcomitrella patens] gi...    55   8e-06

>gb|AAL32616.1| SCARECROW gene regulator [Arabidopsis thaliana]
           gi|27311949|gb|AAO00940.1| SCARECROW gene regulator
           [Arabidopsis thaliana]
          Length = 573

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +1

Query: 199 PETTTQVIMKDDGHGQQALDDRHKVVESAASPQLFQSLLDCAKIIDTDRENAQKMISQIK 378
           P  T +   K+D     + DD   +      P L +++ DCA+I D+D   A K + QI+
Sbjct: 178 PPLTHESPTKEDPETNDSEDDDFDL-----EPPLLKAIYDCARISDSDPNEASKTLLQIR 232

Query: 379 NLANPYGNPTQRIAFYFSDALAIRLN 456
              +  G+PT+R+AFYF++AL+ RL+
Sbjct: 233 ESVSELGDPTERVAFYFTEALSNRLS 258


>ref|NP_201478.1| GRAS family transcription factor [Arabidopsis thaliana]
           gi|75171370|sp|Q9FL03.1|SCL4_ARATH RecName:
           Full=Scarecrow-like protein 4; Short=AtSCL4; AltName:
           Full=GRAS family protein 32; Short=AtGRAS-32
           gi|9758127|dbj|BAB08619.1| SCARECROW gene regulator
           [Arabidopsis thaliana] gi|332010878|gb|AED98261.1| GRAS
           family transcription factor [Arabidopsis thaliana]
          Length = 584

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +1

Query: 199 PETTTQVIMKDDGHGQQALDDRHKVVESAASPQLFQSLLDCAKIIDTDRENAQKMISQIK 378
           P  T +   K+D     + DD   +      P L +++ DCA+I D+D   A K + QI+
Sbjct: 189 PPLTHESPTKEDPETNDSEDDDFDL-----EPPLLKAIYDCARISDSDPNEASKTLLQIR 243

Query: 379 NLANPYGNPTQRIAFYFSDALAIRLN 456
              +  G+PT+R+AFYF++AL+ RL+
Sbjct: 244 ESVSELGDPTERVAFYFTEALSNRLS 269


>ref|XP_004143507.1| PREDICTED: scarecrow-like protein 4-like [Cucumis sativus]
           gi|449527477|ref|XP_004170737.1| PREDICTED:
           scarecrow-like protein 4-like [Cucumis sativus]
          Length = 609

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 53/90 (58%)
 Frame = +1

Query: 199 PETTTQVIMKDDGHGQQALDDRHKVVESAASPQLFQSLLDCAKIIDTDRENAQKMISQIK 378
           P     V+  +D  G  +  D      + ++P L ++L++CA+I +++ + A + + ++K
Sbjct: 213 PNPPLAVLKSEDNGGSSSSAD------TESTPPLLKTLIECARISESEPDRAAQTLIKLK 266

Query: 379 NLANPYGNPTQRIAFYFSDALAIRLNKGKD 468
             ++ +G+PT+R+AFYF DAL  RL+   D
Sbjct: 267 ESSSEHGDPTERVAFYFMDALCRRLSLPSD 296


>emb|CBI17529.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 45/60 (75%)
 Frame = +1

Query: 277 ESAASPQLFQSLLDCAKIIDTDRENAQKMISQIKNLANPYGNPTQRIAFYFSDALAIRLN 456
           E+ ++P + ++LLDCA++ D++ + A K + +++   + +G+PT+R+AFYFS+AL  R++
Sbjct: 212 EAESAPPILKALLDCARLADSEPDRAVKSLIRLRESVSEHGDPTERVAFYFSEALYSRVS 271


>ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vitis vinifera]
          Length = 616

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/60 (36%), Positives = 45/60 (75%)
 Frame = +1

Query: 277 ESAASPQLFQSLLDCAKIIDTDRENAQKMISQIKNLANPYGNPTQRIAFYFSDALAIRLN 456
           E+ ++P + ++LLDCA++ D++ + A K + +++   + +G+PT+R+AFYFS+AL  R++
Sbjct: 241 EAESAPPILKALLDCARLADSEPDRAVKSLIRLRESVSEHGDPTERVAFYFSEALYSRVS 300


>emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera]
          Length = 893

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 22/60 (36%), Positives = 44/60 (73%)
 Frame = +1

Query: 277 ESAASPQLFQSLLDCAKIIDTDRENAQKMISQIKNLANPYGNPTQRIAFYFSDALAIRLN 456
           E  ++P + ++LLDCA++ D++ + A K + +++   + +G+PT+R+AFYFS+AL  R++
Sbjct: 274 EXESAPPILKALLDCARLADSEPDRAVKSLIRLRESVSEHGDPTERVAFYFSEALYSRVS 333


>gb|ADL36819.1| SCL domain class transcription factor [Malus domestica]
          Length = 485

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/60 (38%), Positives = 43/60 (71%)
 Frame = +1

Query: 277 ESAASPQLFQSLLDCAKIIDTDRENAQKMISQIKNLANPYGNPTQRIAFYFSDALAIRLN 456
           E  + P L ++LLDCA++ ++D + A K + +++   + +G+PTQR+AFYF++AL  R++
Sbjct: 108 EIESEPPLLKALLDCARLAESDPDGAVKSLVRLRESISDHGDPTQRVAFYFAEALQNRVS 167


>ref|XP_001755257.1| predicted protein [Physcomitrella patens]
           gi|162693385|gb|EDQ79737.1| predicted protein
           [Physcomitrella patens]
          Length = 420

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +1

Query: 295 QLFQSLLDCAKIIDTDR-ENAQKMISQIKNLANPYGNPTQRIAFYFSDALAIRLNK 459
           QL   LL CA+ I+    + A+ M+S++K ++NPYG+P QRI+ YF+DAL+ RL K
Sbjct: 54  QLVHLLLACAEAIEESNFDTARPMLSRLKAISNPYGDPMQRISLYFADALSDRLTK 109


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