BLASTX nr result
ID: Ephedra28_contig00005046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00005046
(2260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006837119.1| hypothetical protein AMTR_s00110p00121530 [A... 711 0.0
ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi... 672 0.0
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,... 655 0.0
gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis] 640 0.0
ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Caps... 631 e-178
ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containi... 630 e-177
ref|XP_002893403.1| pentatricopeptide repeat-containing protein ... 629 e-177
ref|XP_004490167.1| PREDICTED: pentatricopeptide repeat-containi... 628 e-177
ref|XP_006437942.1| hypothetical protein CICLE_v10031249mg [Citr... 627 e-177
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar... 624 e-176
gb|AAM61409.1| unknown [Arabidopsis thaliana] 624 e-176
gb|EOY01721.1| Tetratricopeptide repeat (TPR)-like superfamily p... 622 e-175
ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containi... 621 e-175
ref|XP_004297246.1| PREDICTED: pentatricopeptide repeat-containi... 615 e-173
ref|XP_003614060.1| Pentatricopeptide repeat-containing protein ... 612 e-172
ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutr... 611 e-172
ref|XP_003518766.1| PREDICTED: pentatricopeptide repeat-containi... 608 e-171
ref|XP_003516357.1| PREDICTED: pentatricopeptide repeat-containi... 604 e-170
ref|XP_002315005.2| pentatricopeptide repeat-containing family p... 601 e-169
ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containi... 601 e-169
>ref|XP_006837119.1| hypothetical protein AMTR_s00110p00121530 [Amborella trichopoda]
gi|548839712|gb|ERM99972.1| hypothetical protein
AMTR_s00110p00121530 [Amborella trichopoda]
Length = 617
Score = 711 bits (1834), Expect = 0.0
Identities = 352/562 (62%), Positives = 440/562 (78%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
+QSLVP+G+ + S R+Q+FS LDL S+L+ FADWMTSQ+W ++K
Sbjct: 79 SQSLVPLGFL-------------HQTPSTRIQAFSQTLDLPSLLNAFADWMTSQRWSDLK 125
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
+LFE WI+SLD +G+PN+PDVNLYNHYLRANLM V+QM +Y + PNTAS+
Sbjct: 126 QLFEFWIRSLDTNGKPNKPDVNLYNHYLRANLMIGGSAGELLDLVAQMEDYGISPNTASY 185
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
NLVLKAM+Q+RE++AA +LLDRMI G+DASPDEE+Y++V+GL F N+I+ ALKYLDL
Sbjct: 186 NLVLKAMYQARESEAAEKLLDRMIQAGKDASPDEESYDLVIGLQFLVNKIDDALKYLDLT 245
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
LKSGYM+S VF CVR+CV AG LDTLT IIE CK MDQNK+LCP WNLCTY++DVA+Q
Sbjct: 246 LKSGYMLSMRVFTDCVRSCVKAGTLDTLTSIIERCKRMDQNKALCPSWNLCTYLADVALQ 305
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
AD KLAF L+F +RW+ARG RPPV+LSVDEGL VSA+GTAARTC+ +LL +W IL
Sbjct: 306 ADNGKLAFHSLEFFARWIARGENVRPPVLLSVDEGLVVSALGTAARTCNSNLLDASWAIL 365
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL +++R P+ E+YL KI+A++ LG L+ AF +L+E ETAY N A ++
Sbjct: 366 RRSL----------RQKRAPNPESYLGKIYAYSMLGTLQRAFATLNEFETAYANPTAVDE 415
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
+LFSPFTSLNPLV +CSK GFA LDSVYFQLE+LSRADPPYKSV A+NC+ILGC+ IWD
Sbjct: 416 -ELFSPFTSLNPLVVACSKNGFATLDSVYFQLENLSRADPPYKSVAAVNCVILGCANIWD 474
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
LDRA+QTFE+I NTF L+P++HSYNAL+ AFG+ K+T EAS VF H+TSLGV+PNE +YS
Sbjct: 475 LDRAYQTFEAISNTFGLTPDIHSYNALLFAFGKMKKTFEASRVFEHLTSLGVRPNETTYS 534
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LLIDA+LIN+D KS+L+ I +MM+ GF PS+ +L+KVRRR VREFD++ EQVR L +KL
Sbjct: 535 LLIDAHLINKDQKSALSIIDEMMNAGFAPSKESLKKVRRRSVREFDDESNEQVRILASKL 594
Query: 1838 KYRMIGEGRRDMLFNLNYSTSL 1903
KYRM GE RRDMLF LNYST L
Sbjct: 595 KYRMGGEARRDMLFGLNYSTEL 616
>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Vitis vinifera]
gi|297738080|emb|CBI27281.3| unnamed protein product
[Vitis vinifera]
Length = 616
Score = 672 bits (1733), Expect = 0.0
Identities = 328/563 (58%), Positives = 431/563 (76%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
AQS++P+G+ S+S+RLQ+ S LD+ S+++VFADWMTSQ+W ++
Sbjct: 77 AQSIIPLGFL-------------HQSSSSRLQALSQTLDVPSLMNVFADWMTSQRWADMN 123
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
+LFE WI+SLD++G+PN+PDVNLYNHYLRA LM V+QM +YA++PNTASF
Sbjct: 124 QLFEFWIRSLDKNGKPNKPDVNLYNHYLRAKLMIGASAGELLDLVAQMEDYAIIPNTASF 183
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
NLVLKAM+Q+RET+AA +L RM+ TG+++ PD+E+YE+VVG+LF ++I++AL+Y+DL
Sbjct: 184 NLVLKAMYQARETEAAEKLFQRMLQTGKESMPDDESYELVVGMLFLTDQIDAALRYVDLT 243
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
LKSGYM+S VFA CVR+CV GRLD L IIE CK MDQNK+L P WN+C +I+D+A+Q
Sbjct: 244 LKSGYMLSMRVFAECVRSCVNKGRLDALVSIIERCKTMDQNKALSPSWNMCIFIADIAMQ 303
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
D SKLAF+ L+F++RW+ARG AR PV+LSVDEGL VSA+GTA RT +LL +W IL
Sbjct: 304 EDNSKLAFYALEFMARWIARGENARGPVLLSVDEGLVVSALGTAGRTYSSTLLDASWAIL 363
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL ++++ P E+YLAKI+A AALG L+ AF +LHE ETAY NS +
Sbjct: 364 RRSL----------RQKKAPQPESYLAKIYADAALGNLQRAFSTLHEFETAYRNSPKEAE 413
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
D+FSPFTSL+PLV + SK GF LD+VYFQLE+LSRADPPYKSV ALNC+ILGC+ IWD
Sbjct: 414 EDIFSPFTSLHPLVMASSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWD 473
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
LDRA+QTFE+I ++F L+P++HSYNALM+AFG+ K+T EAS VF H+TSLG+KPN +S+S
Sbjct: 474 LDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGKLKKTFEASRVFEHLTSLGIKPNAMSFS 533
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LL+DA+LINRD K++L+ I +M++ GF PS+ L+KVRRRC+RE D + +QV SL K
Sbjct: 534 LLVDAHLINRDQKAALSVIEEMINAGFAPSKEILKKVRRRCIREMDYESNDQVESLARKF 593
Query: 1838 KYRMIGEGRRDMLFNLNYSTSLA 1906
K RM E RRDMLFNL Y+T A
Sbjct: 594 KIRMGTENRRDMLFNLAYNTEYA 616
>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 655 bits (1689), Expect = 0.0
Identities = 319/545 (58%), Positives = 419/545 (76%), Gaps = 2/545 (0%)
Frame = +2
Query: 278 PFG--QASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKELFEQWIKSLDQSGRPNR 451
PFG +AR QS S LDL+S+L++FADWMTSQ+W ++K+LFE WI+SLDQ+G+PN+
Sbjct: 84 PFGILHQPPTARFQSMSQTLDLNSLLNLFADWMTSQRWSDMKQLFEFWIRSLDQNGKPNK 143
Query: 452 PDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFNLVLKAMFQSRETQAAVR 631
PDVNL+NHYLRANLM ++QM +YA+LPNTASFNLVLKAMFQ+RET AA +
Sbjct: 144 PDVNLFNHYLRANLMTNATAVDLLDLLAQMEDYAVLPNTASFNLVLKAMFQARETAAAEK 203
Query: 632 LLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLALKSGYMISTNVFASCVRA 811
LL RM TG ++ PD+E+Y++V+G+LF N+I++ALKY+D LK+G+ +S VF CV++
Sbjct: 204 LLQRMELTGNESQPDDESYDLVIGMLFSTNQIDAALKYIDKTLKNGHTLSMRVFTECVKS 263
Query: 812 CVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQADISKLAFFGLDFLSRWM 991
CV GRLDTL IIE CK +DQNK+L P WN+C YI++VA+Q D SKLA++ L+F+++W+
Sbjct: 264 CVNKGRLDTLVSIIEKCKKVDQNKALSPTWNMCYYIAEVAMQEDNSKLAYYALEFMAKWI 323
Query: 992 ARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILMRSLXXXXXXXXEEKKRR 1171
ARG ARP ++LSVDEGL VSA+GTA RT +LL +W IL RSL + ++
Sbjct: 324 ARGENARPAILLSVDEGLVVSALGTAGRTYSSTLLDASWAILRRSL----------RDKK 373
Query: 1172 LPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDLDLFSPFTSLNPLVRSCS 1351
PS E+YL +I+A+A+LG L+ AF +L E E+AY +S+ + +LFSPFTSLNPLV +CS
Sbjct: 374 APSPESYLGRIYAYASLGNLQKAFTTLREYESAYDSSEKEAEEELFSPFTSLNPLVVACS 433
Query: 1352 KGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDLDRAFQTFESIQNTFELS 1531
K GF LD+VYFQLE+LSRA+ PYKSV ALNCIILGC+ IWD+DRA+QTFE+I ++FEL+
Sbjct: 434 KKGFETLDTVYFQLENLSRAERPYKSVAALNCIILGCANIWDIDRAYQTFEAIGSSFELT 493
Query: 1532 PNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSLLIDAYLINRDTKSSLAT 1711
PN+HSYNAL++AFGR K+T EA+ VF H+ SLG+KPN +Y LL+DA+LINRD K++L+
Sbjct: 494 PNIHSYNALIYAFGRLKKTFEAARVFEHLVSLGIKPNATTYLLLVDAHLINRDVKTALSV 553
Query: 1712 IHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLKYRMIGEGRRDMLFNLNY 1891
I +MM GFTPS+ TL+KVRRRCVRE D D ++V S+ K RM E RRDMLFNL Y
Sbjct: 554 IEEMMSAGFTPSKETLKKVRRRCVREMDYDSDDRVGSVAKNCKIRMGTENRRDMLFNLEY 613
Query: 1892 STSLA 1906
ST A
Sbjct: 614 STDYA 618
>gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]
Length = 665
Score = 640 bits (1650), Expect = 0.0
Identities = 322/558 (57%), Positives = 412/558 (73%)
Frame = +2
Query: 233 PIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKELFEQ 412
PI +S +QS+ Q+ AS +D S++DVFAD SQ W E+K LFE
Sbjct: 124 PIANSSTNQSVIPLDFLRQSPAS-------RAMDAKSLMDVFADCTASQNWSEVKRLFEA 176
Query: 413 WIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFNLVLK 592
W++SLD++G+PN+PDV+L+N+YLRANLM V+QM +YA+ PNTASFNLVLK
Sbjct: 177 WVQSLDKNGKPNKPDVSLFNYYLRANLMIGATAGDLLDVVAQMEDYAIKPNTASFNLVLK 236
Query: 593 AMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLALKSGY 772
AM Q+RET+AAV+LLDRM+ TG+++ PD+E+Y +V+GLLFQ ++I+ A KY+DL LKSGY
Sbjct: 237 AMCQARETEAAVKLLDRMLLTGKESLPDDESYNLVLGLLFQSDKIDEAFKYIDLTLKSGY 296
Query: 773 MISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQADISK 952
+S VF+ CVR CV GRLD L II+ CKAMDQNK+LCP W LC +I+ VA+Q D SK
Sbjct: 297 TLSLRVFSDCVRVCVNKGRLDALVSIIDRCKAMDQNKALCPTWGLCNFIAGVALQEDNSK 356
Query: 953 LAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILMRSLX 1132
LA+ L+F+++W+ARG RPPV LSV+EGL VSA+GTAART D LL +W IL RSL
Sbjct: 357 LAYHALEFMAKWIARGEQTRPPVWLSVEEGLLVSAIGTAARTYDSDLLDASWVILRRSL- 415
Query: 1133 XXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDLDLFS 1312
++++ P+ EAYLAKIHA A LG L+ AF +L E E+ YGNS + +LFS
Sbjct: 416 ---------RQKKAPNPEAYLAKIHALALLGNLRRAFSTLQEFESVYGNSQTEAEEELFS 466
Query: 1313 PFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDLDRAF 1492
PFTSL PLV +CSK GF LDSVYFQLE+LSRADPPYKSV ALNCIILGC+ WDLDRA+
Sbjct: 467 PFTSLYPLVVACSKKGFETLDSVYFQLENLSRADPPYKSVAALNCIILGCANNWDLDRAY 526
Query: 1493 QTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSLLIDA 1672
QTFE+I ++F L+P++HSYNAL+ AFG K+T EAS VF+HM SLG+KPN SYSLL+D
Sbjct: 527 QTFEAIGSSFGLNPDIHSYNALVKAFGNLKKTFEASKVFDHMLSLGIKPNATSYSLLVDT 586
Query: 1673 YLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLKYRMI 1852
+LINRD K++L+ + DM++ GF PS+ TL+KVRRRC+RE D + ++V+S K K RM
Sbjct: 587 HLINRDQKAALSMLDDMVNAGFEPSKETLKKVRRRCIREMDYESNDRVQSFAVKYKIRMG 646
Query: 1853 GEGRRDMLFNLNYSTSLA 1906
E RRDMLFNL YST A
Sbjct: 647 TENRRDMLFNLRYSTEYA 664
>ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Capsella rubella]
gi|482571880|gb|EOA36067.1| hypothetical protein
CARUB_v10008572mg [Capsella rubella]
Length = 630
Score = 631 bits (1628), Expect = e-178
Identities = 321/634 (50%), Positives = 439/634 (69%), Gaps = 1/634 (0%)
Frame = +2
Query: 8 LLGKMQRALRSLWKISPSPRNSWSRGISGSAWLRQQEEATAPAEDXXXXXXXXXXXXXXX 187
L + + +L K +P NS R ISG+ +L Q + + D
Sbjct: 5 LFTRSRLSLLKTLKPNPLASNSTIRAISGTPFLCQDPQLATESTDHETPNHQSNSTPLPP 64
Query: 188 XXXXXXXXXXAQSLVPI-GYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFAD 364
PI S +QS+ QA A AR+++ S LD++++L++FAD
Sbjct: 65 NPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPA-ARIRALSETLDMNALLNMFAD 123
Query: 365 WMTSQKWVEIKELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMH 544
W SQ+W ++K+LFE W++SLD++G+PN+PDVNLYNHYLRANLM V+ M
Sbjct: 124 WTASQRWSDMKQLFEFWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAADMLDLVAPME 183
Query: 545 NYALLPNTASFNLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENE 724
+++ PNTAS+NLVLKAM+Q+RET AA++LL+RM+ G+++ PD+E+Y++V+G+LF +
Sbjct: 184 EFSVAPNTASYNLVLKAMYQARETDAAMKLLERMLLLGKESLPDDESYDLVIGMLFGTGK 243
Query: 725 IESALKYLDLALKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWN 904
+ A+K +D+ALKSGYM+ST VF CVR+CVA GR DTL IIE CKA+D+NKSLCP W
Sbjct: 244 NDEAMKIMDMALKSGYMLSTTVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWI 303
Query: 905 LCTYISDVAIQADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCD 1084
LC YI++VAIQ D SKLAF+ +F+ +W+ RG +ARP VILSVDEGL V+ + TAARTC
Sbjct: 304 LCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVILSVDEGLVVAGLATAARTCS 363
Query: 1085 LSLLKKAWEILMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELE 1264
SL++ +W IL +SL + R+ + +Y+AKI+A+A+LG L+ AF SLHELE
Sbjct: 364 SSLVEGSWTILKQSL----------RGRKAANPASYIAKINAYASLGNLQKAFTSLHELE 413
Query: 1265 TAYGNSDAPEDLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALN 1444
+AY +S+ ++ SPFTSL PLV +CSK GF LD VYFQLESLS+ D PYKSV ALN
Sbjct: 414 SAYADSEKEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALN 473
Query: 1445 CIILGCSYIWDLDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTS 1624
CIILGC+ WDLDRA+QTFE+I +F L+PN+ SYNAL++AFG+ K+T EA+NVF H+ S
Sbjct: 474 CIILGCANTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVS 533
Query: 1625 LGVKPNELSYSLLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDG 1804
+GVKP+ +YSLL+DA+LINRD KS+L + DM+ GF PS+ TL+K+RRRCVRE DN+
Sbjct: 534 IGVKPDSRTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDNEN 593
Query: 1805 VEQVRSLCNKLKYRMIGEGRRDMLFNLNYSTSLA 1906
+QV +L K + RM E RR+MLFN++YS A
Sbjct: 594 DDQVEALAKKFQIRMGTENRRNMLFNIDYSRGRA 627
>ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 613
Score = 630 bits (1624), Expect = e-177
Identities = 305/563 (54%), Positives = 419/563 (74%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
AQSL+P+G +++ R+Q+ S +D +++D+FA+WMTS++W ++K
Sbjct: 75 AQSLIPLGLLKN-------------ASTQRVQAISQTIDAQTLMDLFANWMTSKRWSDMK 121
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
E+FE WI+SLD G+PN+PDV LYNHY+RAN M V+Q ++A++PNTAS+
Sbjct: 122 EMFEYWIRSLDVHGKPNKPDVGLYNHYIRANFMLEASTAELIDLVAQTEDFAIVPNTASY 181
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
NLVLKAM Q+ E++AA + L+RM+ G+D+ PD+ETY++++ LLF + EI+SALKY+D+A
Sbjct: 182 NLVLKAMHQAGESEAAQKWLERMLQGGKDSLPDDETYDLLISLLFSKGEIDSALKYIDMA 241
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
LKSGYM+S NVF CVR CV R D L II+ CK MDQNK+LCP WNLC I++VA+Q
Sbjct: 242 LKSGYMLSMNVFTECVRGCVDERRPDALVSIIKKCKTMDQNKALCPTWNLCIIIAEVAVQ 301
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
D S+LAF+ L+FL+RWMARG ARPPV+LS DEGL VS +GTA RT + LL +W +L
Sbjct: 302 EDNSELAFYALEFLARWMARGENARPPVLLSADEGLVVSVLGTAGRTFNQKLLDASWAVL 361
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL +++R+P E+YL KI+A A++G+L+ AF +L+E ETAYG+S +
Sbjct: 362 RRSL----------RQKRVPKPESYLGKIYAHASMGDLQRAFITLNEFETAYGDSIIDME 411
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
++FSPFTSL PLV +CS+ GF LDSVYFQLE+LSRA+PPYKSV A+NC+ILGC+ IWD
Sbjct: 412 -EIFSPFTSLYPLVVACSRKGFETLDSVYFQLENLSRAEPPYKSVAAINCVILGCANIWD 470
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
LDRA+QTFE++ ++F L+P++HSYNAL++AFG+ K+T EAS VF H+ SLGVKPN +SYS
Sbjct: 471 LDRAYQTFEAMGSSFGLTPDIHSYNALIYAFGKLKKTFEASRVFEHLVSLGVKPNAMSYS 530
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LL+DA+L NRD K++L+ I +M++ GF PS+ TL+KVRRRCVRE D + ++V +L K
Sbjct: 531 LLVDAHLTNRDQKAALSVIDEMVNAGFAPSKETLKKVRRRCVREMDEESNDRVEALAKKF 590
Query: 1838 KYRMIGEGRRDMLFNLNYSTSLA 1906
RM E R+++LFNL YS S A
Sbjct: 591 DIRMNTENRKNILFNLEYSASYA 613
>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339245|gb|EFH69662.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 630
Score = 629 bits (1621), Expect = e-177
Identities = 310/562 (55%), Positives = 417/562 (74%)
Frame = +2
Query: 221 QSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKE 400
QSLVP+G+ + QA A AR+++ S LD++S+L++FADW SQ+W ++K+
Sbjct: 89 QSLVPLGFLN------------QAPA-ARIRALSETLDMNSLLNMFADWTASQRWSDMKQ 135
Query: 401 LFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFN 580
LFE W++SLD++G+PN+PDVNLYNHYLRANLM V+ M +++ PNTAS+N
Sbjct: 136 LFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVAPMEEFSVAPNTASYN 195
Query: 581 LVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLAL 760
LVLKAM+Q+RET AA++LL+RM+ G+++ PD+E+Y++V+G+ F + + A+K +D AL
Sbjct: 196 LVLKAMYQARETDAAMKLLERMLLLGKESPPDDESYDLVIGMHFGVGKNDEAMKVMDTAL 255
Query: 761 KSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQA 940
KSGYM+ST VF CVR+CVA GR DTL IIE CKA+D+NKSLCP W LC YI++VAIQ
Sbjct: 256 KSGYMLSTTVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWILCNYIAEVAIQE 315
Query: 941 DISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILM 1120
D SKLAF+ +F+ +W+ RG +ARP VILSVDEGL V+ + TAARTC SL++ +W IL
Sbjct: 316 DNSKLAFYAFEFMFKWITRGEMARPSVILSVDEGLVVAGLATAARTCSSSLVEGSWTILK 375
Query: 1121 RSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDL 1300
+SL + R+ + +Y+AKI+A+A+LG L+ AF SLHELETAY +S+
Sbjct: 376 QSL----------RGRKAANPASYIAKINAYASLGNLQKAFTSLHELETAYADSEKEVVE 425
Query: 1301 DLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDL 1480
++ SPFTSL PLV +CSK GF LD VYFQLESLSR D PYKSV ALNCIILGC+ WDL
Sbjct: 426 EMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSRGDTPYKSVAALNCIILGCANTWDL 485
Query: 1481 DRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSL 1660
DRA+QTFE+I +F L+PN+ SYNAL++AFG+ K+T EA+NVF H+ S+GVKP+ +YSL
Sbjct: 486 DRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSL 545
Query: 1661 LIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLK 1840
L+DA+LINRD KS+L + DM+ GF PS+ TL+K+RRRCVRE D + +QV +L K +
Sbjct: 546 LVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDYENDDQVEALAKKFQ 605
Query: 1841 YRMIGEGRRDMLFNLNYSTSLA 1906
RM E RR+MLFN++YS A
Sbjct: 606 IRMGTENRRNMLFNIDYSRGRA 627
>ref|XP_004490167.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502094224|ref|XP_004490168.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X2 [Cicer arietinum]
gi|502094228|ref|XP_004490169.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X3 [Cicer arietinum]
Length = 609
Score = 628 bits (1619), Expect = e-177
Identities = 312/558 (55%), Positives = 415/558 (74%)
Frame = +2
Query: 233 PIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKELFEQ 412
PI +S + ++ +PFG + ++ ++ D H++LD+F DWM SQ+W ++K+LFE
Sbjct: 70 PIPKSSSNNAV---TPFGLFTRASVKDTY----DSHALLDMFGDWMASQRWQDVKDLFED 122
Query: 413 WIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFNLVLK 592
W++SLD++G+PN+PDVNL+NHY+RANLM ++QM ++ + PNTASFNLVLK
Sbjct: 123 WVRSLDKNGKPNKPDVNLFNHYIRANLMIGGSAADLLDLLAQMEHFNVSPNTASFNLVLK 182
Query: 593 AMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLALKSGY 772
AM Q+ ET AA +L++RM+ +G +A PD+E+Y++V+G+ F ++I++A KY+DL LK G
Sbjct: 183 AMHQAGETLAAEKLVERMLQSGNEALPDDESYDLVIGMFFSTDQIDAAFKYIDLTLKHGN 242
Query: 773 MISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQADISK 952
++S N F +CVR+CV RLDTL IIE C+ D+NKSLCP WNLC +I++VAI+ D SK
Sbjct: 243 VLSMNTFMNCVRSCVKQRRLDTLVAIIEKCRETDKNKSLCPSWNLCNFIAEVAIREDNSK 302
Query: 953 LAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILMRSLX 1132
LA++GL+F++RWM G ARPPV+LSVDEGL VSAM TA RT + LL AW +L RSL
Sbjct: 303 LAYYGLEFMARWMVNGERARPPVLLSVDEGLVVSAMLTAGRTYNSELLGAAWSVLGRSL- 361
Query: 1133 XXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDLDLFS 1312
+K+++P+ E+YL KI A A+LG L+ AF +LHE E +YG+S+ E DLF
Sbjct: 362 ---------RKKKVPNPESYLGKISALASLGNLQKAFGTLHEYEISYGDSN-QEANDLFC 411
Query: 1313 PFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDLDRAF 1492
PFTSL+PLV +CSK GF LDSVYFQLESLSRA+ PYKSV ALNCIILGC+ IWDLDRA+
Sbjct: 412 PFTSLHPLVVACSKKGFETLDSVYFQLESLSRAERPYKSVAALNCIILGCANIWDLDRAY 471
Query: 1493 QTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSLLIDA 1672
QTFESI + F L+P++HSYN LM+AFG+ K+T EAS VF H+ SLGVKPN SYSLL+DA
Sbjct: 472 QTFESIGSAFGLTPDIHSYNGLMYAFGKLKKTHEASKVFEHLVSLGVKPNAKSYSLLVDA 531
Query: 1673 YLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLKYRMI 1852
+LINRD KS+LA I DM+ GF P ++TL+ VRRRCVRE DND ++V SL L RM
Sbjct: 532 HLINRDVKSALAVIDDMIAAGFKPLKATLQNVRRRCVREIDNDSDQRVDSLAQSLNIRMA 591
Query: 1853 GEGRRDMLFNLNYSTSLA 1906
+ RR+MLFNLNYS +A
Sbjct: 592 SDARRNMLFNLNYSMDMA 609
>ref|XP_006437942.1| hypothetical protein CICLE_v10031249mg [Citrus clementina]
gi|567890849|ref|XP_006437945.1| hypothetical protein
CICLE_v10031249mg [Citrus clementina]
gi|557540138|gb|ESR51182.1| hypothetical protein
CICLE_v10031249mg [Citrus clementina]
gi|557540141|gb|ESR51185.1| hypothetical protein
CICLE_v10031249mg [Citrus clementina]
Length = 613
Score = 627 bits (1617), Expect = e-177
Identities = 303/563 (53%), Positives = 418/563 (74%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
AQSL+P+G +++ R+Q+ S +D +++D+FA+WMTS++W ++K
Sbjct: 75 AQSLIPLGLLKN-------------ASTQRVQAISQTIDAQTLMDLFANWMTSKRWSDMK 121
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
E+FE WI+SLD G+PN+PDV LYNHY+RAN M V+Q ++A++PNTAS+
Sbjct: 122 EMFEYWIRSLDVHGKPNKPDVGLYNHYIRANFMLEASTAELIDLVAQTEDFAIVPNTASY 181
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
NLVLKAM Q+ E++AA + L+RM+ G+D+ PD+ETY++++ LLF + EI+S+LKY+D+A
Sbjct: 182 NLVLKAMHQAGESEAAQKWLERMLQGGKDSLPDDETYDLLISLLFSKGEIDSSLKYIDMA 241
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
LKSGYM+S NVF CVR CV R D L II+ CK MDQNK+LCP WNLC I++VA+Q
Sbjct: 242 LKSGYMLSMNVFTECVRGCVDERRPDALVSIIKKCKTMDQNKALCPTWNLCIIIAEVAVQ 301
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
D S+LAF+ L+FL+RWMARG ARPPV+LS DEGL VS +GTA RT + LL +W +L
Sbjct: 302 EDNSELAFYALEFLARWMARGENARPPVLLSADEGLVVSVLGTAGRTFNQKLLDASWAVL 361
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL +++R+P E+YL KI+A A++G+L+ AF +L+E ETAYG+S +
Sbjct: 362 RRSL----------RQKRVPKPESYLGKIYAHASMGDLQRAFITLNEFETAYGDSIIDME 411
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
++FSPFTSL PLV +CS+ GF LDSVYFQLE+LSRA+PPYKSV A+NC+ILGC+ IWD
Sbjct: 412 -EIFSPFTSLYPLVVACSRKGFETLDSVYFQLENLSRAEPPYKSVAAINCVILGCANIWD 470
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
LDRA+QTFE++ ++F L+P++HSYNAL++AFG+ K+T EAS VF H+ SLGVKPN +SYS
Sbjct: 471 LDRAYQTFEAMGSSFGLTPDIHSYNALIYAFGKLKKTFEASRVFEHLVSLGVKPNAMSYS 530
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LL+DA+L NRD K++L+ I +M++ GF PS+ TL+KVRRRCVRE D + ++V +L K
Sbjct: 531 LLVDAHLTNRDQKAALSVIDEMVNAGFAPSKETLKKVRRRCVREMDEESNDRVEALAKKF 590
Query: 1838 KYRMIGEGRRDMLFNLNYSTSLA 1906
RM E R+++LFNL Y S A
Sbjct: 591 DIRMNTENRKNILFNLEYGASYA 613
>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g26460, mitochondrial; Flags: Precursor
gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
to a hypothetical protein F21B7.16 gi|7485908 from
Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
multiple PPR PF|01535 repeats and a domain of unknown
function PF|00668. ESTs gb|T45755, gb|AI993167,
gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
gb|AI099868 come from this gene [Arabidopsis thaliana]
gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
thaliana] gi|22136300|gb|AAM91228.1| unknown protein
[Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 624 bits (1609), Expect = e-176
Identities = 306/562 (54%), Positives = 418/562 (74%)
Frame = +2
Query: 221 QSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKE 400
QSLVP+G+ + QA A R+++ S LD++S+L++FADW SQ+W ++K+
Sbjct: 89 QSLVPLGFLN------------QAPAP-RIRALSETLDMNSLLNMFADWTASQRWSDMKQ 135
Query: 401 LFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFN 580
LFE W++SLD++G+PN+PDVNLYNHYLRANLM V+ M +++ PNTAS+N
Sbjct: 136 LFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVAPMEEFSVEPNTASYN 195
Query: 581 LVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLAL 760
LVLKAM+Q+RET+AA++LL+RM+ G+D+ PD+E+Y++V+G+ F + + A+K +D AL
Sbjct: 196 LVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFGVGKNDEAMKVMDTAL 255
Query: 761 KSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQA 940
KSGYM+ST+VF CVR+CVA GR DTL IIE CKA+D+NKSLCP W LC YI++VAIQ
Sbjct: 256 KSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWILCNYIAEVAIQE 315
Query: 941 DISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILM 1120
D SKLAF+ +F+ +W+ RG +ARP VI SVDEGL V+ + +AARTC SL++ +W IL
Sbjct: 316 DNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTCSSSLVEGSWTILK 375
Query: 1121 RSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDL 1300
+SL + R+ + +Y+AKI+A+A+LG L+ AF SLHELE+AY +S+
Sbjct: 376 QSL----------RGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKEVVE 425
Query: 1301 DLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDL 1480
++ SPFTSL PLV +CSK GF LD VYFQLESLS+ D PYKSV ALNCIILGC+ WDL
Sbjct: 426 EMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANTWDL 485
Query: 1481 DRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSL 1660
DRA+QTFE+I +F L+PN+ SYNAL++AFG+ K+T EA+NVF H+ S+GVKP+ +YSL
Sbjct: 486 DRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSL 545
Query: 1661 LIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLK 1840
L+DA+LINRD KS+L + DM+ GF PS+ TL+K+RRRCVRE D++ +QV +L K +
Sbjct: 546 LVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQ 605
Query: 1841 YRMIGEGRRDMLFNLNYSTSLA 1906
RM E RR+MLFN++YS A
Sbjct: 606 IRMGSENRRNMLFNIDYSRGRA 627
>gb|AAM61409.1| unknown [Arabidopsis thaliana]
Length = 630
Score = 624 bits (1608), Expect = e-176
Identities = 306/562 (54%), Positives = 417/562 (74%)
Frame = +2
Query: 221 QSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKE 400
QSLVP+G+ + QA A R+++ S LD++S+L++FADW SQ+W ++K+
Sbjct: 89 QSLVPLGFLN------------QAPAP-RIRALSETLDMNSLLNMFADWTASQRWSDMKQ 135
Query: 401 LFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFN 580
LFE W++SLD++G+PN+PDVNLYNHYLRANLM V+ M +++ PNTAS+N
Sbjct: 136 LFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVAPMEEFSVEPNTASYN 195
Query: 581 LVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLAL 760
LVLKAM+Q+RET+AA++LL+RM+ G+D+ PD+E+Y++V+G+ F + + A+K +D AL
Sbjct: 196 LVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFGVGKNDEAMKVMDTAL 255
Query: 761 KSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQA 940
KSGYM+ST+VF CVR+CVA GR DTL IIE CKA+D+NKSLCP W LC YI++VAIQ
Sbjct: 256 KSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWILCNYIAEVAIQE 315
Query: 941 DISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILM 1120
D SKLAF+ +F+ +W+ RG +ARP VI SVDEGL V+ + +AARTC SL++ +W IL
Sbjct: 316 DNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTCSSSLVEGSWTILK 375
Query: 1121 RSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDL 1300
+SL + R+ +Y+AKI+A+A+LG L+ AF SLHELE+AY +S+
Sbjct: 376 QSL----------RGRKAAKPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKEVVE 425
Query: 1301 DLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDL 1480
++ SPFTSL PLV +CSK GF LD VYFQLESLS+ D PYKSV ALNCIILGC+ WDL
Sbjct: 426 EMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANTWDL 485
Query: 1481 DRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSL 1660
DRA+QTFE+I +F L+PN+ SYNAL++AFG+ K+T EA+NVF H+ S+GVKP+ +YSL
Sbjct: 486 DRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSL 545
Query: 1661 LIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLK 1840
L+DA+LINRD KS+L + DM+ GF PS+ TL+K+RRRCVRE D++ +QV +L K +
Sbjct: 546 LVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQ 605
Query: 1841 YRMIGEGRRDMLFNLNYSTSLA 1906
RM E RR+MLFN++YS A
Sbjct: 606 IRMGSENRRNMLFNIDYSRGRA 627
>gb|EOY01721.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 616
Score = 622 bits (1604), Expect = e-175
Identities = 306/566 (54%), Positives = 416/566 (73%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
AQSL+P+G+ + R+Q S LD ++++ FA MT Q+W ++K
Sbjct: 75 AQSLIPLGFLV-------------QAPGHRIQYLSENLDAPALMNHFAGLMTQQRWADVK 121
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
ELFE W++SLD++G+PN+PDVNLYNHYLRANLM V+QM ++A++PNTASF
Sbjct: 122 ELFEFWVRSLDKNGKPNKPDVNLYNHYLRANLMIGASAGDLLDLVAQMDDFAIVPNTASF 181
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
N +LKAM Q++ET+AA +LL+RM+ G ++ PD+++Y++V+G+LF+ +I++ALKY+D+A
Sbjct: 182 NFILKAMNQAKETEAAKKLLERMLQGGAESLPDDDSYDLVIGMLFEAEQIDAALKYVDMA 241
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
LKSGY++S VF CV +CV GRLDTL +IE CK DQN++L P WNLC Y+++VA+Q
Sbjct: 242 LKSGYLLSMRVFTECVGSCVRQGRLDTLATVIERCKTKDQNRALYPNWNLCNYLAEVAMQ 301
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
AD SKLAF+ L+F+++W+ARG +A+PP +LSVDEGL VSA+ TA RT +LL +W IL
Sbjct: 302 ADNSKLAFYALEFMAKWIARGEIAKPPFLLSVDEGLIVSALATAGRTYSSNLLDASWAIL 361
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL +++++PS E+YL K++A A+LG L+ AF +LHE E A+ NS E
Sbjct: 362 RRSL----------RQKKVPSPESYLGKMYAHASLGNLQKAFGTLHEFEAAHRNS-INEA 410
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
DLFSPFTSL PLV +CSK GF LDSVY+QLE LS ADPPYKSV ALNCIILGC IWD
Sbjct: 411 EDLFSPFTSLYPLVVACSKKGFETLDSVYYQLEKLSSADPPYKSVAALNCIILGCGNIWD 470
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
++RA+QTF++I ++F L+P++HSYNALM+AFG+ K+T EAS VF HM SLGVKPN SYS
Sbjct: 471 IERAYQTFDAIGSSFGLTPDIHSYNALMYAFGKLKKTFEASRVFEHMLSLGVKPNAKSYS 530
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LL+DA+LINRD KS+L+ I +M+ F PS+ T++KVRRRC+RE D + ++V SL K
Sbjct: 531 LLVDAHLINRDQKSALSAIDEMVTAEFVPSKETVKKVRRRCIREMDYESDDRVESLAKKF 590
Query: 1838 KYRMIGEGRRDMLFNLNYSTSLAYAT 1915
+M E RR MLFNL+Y T A A+
Sbjct: 591 NIQMGSENRRGMLFNLDYGTEYASAS 616
>ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
gi|449489211|ref|XP_004158247.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 621 bits (1602), Expect = e-175
Identities = 307/561 (54%), Positives = 408/561 (72%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
AQS++P G+ S S + R+Q+ S LD+ +L VFADWM SQ+W ++K
Sbjct: 78 AQSMIPDGFLS-------------QSPNYRIQALSQTLDVQGLLSVFADWMASQRWEDMK 124
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
+LFE WI+SLD+ G+PN+PDVNLYN+YLRANLM +++M +YA+ PNTASF
Sbjct: 125 QLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMSDATPGVLLDLLTRMEDYAISPNTASF 184
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLA 757
NLVLKAM+Q+RET+AA +LL+RM+ TG+++ PD+E+Y++V+ +L +I++ALKY+DL
Sbjct: 185 NLVLKAMYQARETEAAEKLLERMLQTGEESMPDDESYDLVIRMLLSTYQIDAALKYIDLT 244
Query: 758 LKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQ 937
K G+M+S F+ CVR+CV GRLDTL +I+ CKA +NK+L P WN C I+ A Q
Sbjct: 245 SKPGHMLSLKAFSECVRSCVRKGRLDTLVSVIDKCKATVENKALSPTWNSCYDIAIAATQ 304
Query: 938 ADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEIL 1117
D SKLA++ L+F+++W+ARG ARPPV LSVDEGL VS +GTA RT SLL AW +L
Sbjct: 305 QDNSKLAYYALEFMAQWIARGENARPPVHLSVDEGLVVSTLGTAGRTYSSSLLDAAWSVL 364
Query: 1118 MRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPED 1297
RSL +++++P+ E++L KI+ A+LG L+ AF +L E E AY NSD
Sbjct: 365 KRSL----------RQKKVPNPESFLGKIYTLASLGNLQRAFSTLREFEEAYRNSDDGSC 414
Query: 1298 LDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWD 1477
D+FSPFTSL+PLV +CSK GF LD VYFQLE+LSRADPPYKSV ALNC+ILGC+ IWD
Sbjct: 415 EDMFSPFTSLHPLVVACSKKGFETLDLVYFQLENLSRADPPYKSVAALNCVILGCANIWD 474
Query: 1478 LDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYS 1657
LDRA+QTFE+I ++F L+PN+HSYNALM+AFGR K+T EA+ VF H+ LG+KPN SYS
Sbjct: 475 LDRAYQTFEAIGSSFGLTPNIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNATSYS 534
Query: 1658 LLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKL 1837
LL DA+LINRD KS+LA I +M+ GF PS+ L+KVRRRC+RE D D ++V +L
Sbjct: 535 LLADAHLINRDPKSALAAIDNMVTAGFAPSKELLKKVRRRCIREQDYDSNDKVGNLAQNF 594
Query: 1838 KYRMIGEGRRDMLFNLNYSTS 1900
K RM E RRD+LFNLNY ++
Sbjct: 595 KIRMGSESRRDILFNLNYGSN 615
>ref|XP_004297246.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 618
Score = 615 bits (1585), Expect = e-173
Identities = 302/542 (55%), Positives = 397/542 (73%)
Frame = +2
Query: 275 SPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKELFEQWIKSLDQSGRPNRP 454
S F + S S ++QS + +LD +L+VFADWMTSQ+W E+K+LFE WI+S+D+SGRPNRP
Sbjct: 84 SGFLEQSPSYKIQSLAQDLDSPGLLNVFADWMTSQRWTEMKQLFEVWIRSMDKSGRPNRP 143
Query: 455 DVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFNLVLKAMFQSRETQAAVRL 634
DV+ YNHYL ANLM V++M + + PNTASFNLVLKAM +E++AA +L
Sbjct: 144 DVSSYNHYLMANLMSGATAADMLDLVARMEDCGVAPNTASFNLVLKAMHAGQESEAAEKL 203
Query: 635 LDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDLALKSGYMISTNVFASCVRAC 814
L RM+ TG+ + PD+E+Y IVV LL Q + ++A KY++L LKSGYM++ VF CV+AC
Sbjct: 204 LQRMLQTGKASPPDDESYNIVVSLLLQSHRNDAAFKYIELTLKSGYMVTMTVFQDCVQAC 263
Query: 815 VAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQADISKLAFFGLDFLSRWMA 994
V G+LDTL II+ CK+MDQNK+LCPPWNLC +I+DVA+Q D SKLA L F+++W+A
Sbjct: 264 VNTGKLDTLVSIIDKCKSMDQNKALCPPWNLCNFIADVALQVDNSKLAVHALQFMAKWIA 323
Query: 995 RGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILMRSLXXXXXXXXEEKKRRL 1174
RG ARP V L VDEGL VSA+ TA RT +LL +W IL RSL + +++
Sbjct: 324 RGEAARPAVFLPVDEGLLVSALQTAGRTYSTTLLDVSWAILQRSL----------RGKKV 373
Query: 1175 PSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDLDLFSPFTSLNPLVRSCSK 1354
P+ E++LAKI A A+LGEL+ AFR+L E E+AY NS + +LF PFTSL PLV +CSK
Sbjct: 374 PNPESFLAKISALASLGELQRAFRTLSEFESAYANSGKEIEEELFCPFTSLYPLVVACSK 433
Query: 1355 GGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDLDRAFQTFESIQNTFELSP 1534
GF LD+VYFQLESLS ADPPYKSV ALNCIILGC+ IWDLDRA+QTFE+I +TF L+P
Sbjct: 434 NGFETLDTVYFQLESLSCADPPYKSVAALNCIILGCANIWDLDRAYQTFEAISSTFGLTP 493
Query: 1535 NVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSLLIDAYLINRDTKSSLATI 1714
++HSYNALM AFG+ K+T EA VF H+ SLGV+PN +SYSLL+DA+LINRD K +++ +
Sbjct: 494 DIHSYNALMQAFGKLKKTSEAVRVFEHLVSLGVRPNAMSYSLLVDAHLINRDPKVAVSVV 553
Query: 1715 HDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLKYRMIGEGRRDMLFNLNYS 1894
DM+ GF PS+ TL+K++RRC+RE D + + V RM GE RR+ LF L ++
Sbjct: 554 KDMVKSGFKPSKETLKKIKRRCMREMDYESDDLVEEYAKTFDLRMDGEARRNRLFELKFN 613
Query: 1895 TS 1900
++
Sbjct: 614 ST 615
>ref|XP_003614060.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515395|gb|AES97018.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 611
Score = 612 bits (1579), Expect = e-172
Identities = 295/532 (55%), Positives = 400/532 (75%)
Frame = +2
Query: 314 SFSHELDLHSMLDVFADWMTSQKWVEIKELFEQWIKSLDQSGRPNRPDVNLYNHYLRANL 493
S S D +++L+VF DW+ SQ+W ++KE+FE W++SLD++G+PN+PDVNL+NHY+RANL
Sbjct: 85 SVSETYDSNALLNVFGDWVASQRWGDVKEMFEGWVRSLDKNGKPNKPDVNLFNHYIRANL 144
Query: 494 MXXXXXXXXXXFVSQMHNYALLPNTASFNLVLKAMFQSRETQAAVRLLDRMIHTGQDASP 673
M ++QM + +LPNTASFNLVLKAM Q+RET AA +LL+RM+ +G +A P
Sbjct: 145 MIGASAADLLDLLAQMEQFDILPNTASFNLVLKAMHQARETLAAEKLLERMLQSGNEAFP 204
Query: 674 DEETYEIVVGLLFQENEIESALKYLDLALKSGYMISTNVFASCVRACVAAGRLDTLTKII 853
D+E++++V+G+LF ++I++A KY+D LK G +S ++F CVR+CV GRLDTL II
Sbjct: 205 DDESFDLVIGMLFATDQIDTAFKYIDSTLKHGNKLSMDLFMKCVRSCVKQGRLDTLVAII 264
Query: 854 EDCKAMDQNKSLCPPWNLCTYISDVAIQADISKLAFFGLDFLSRWMARGMVARPPVILSV 1033
E C+A DQNK+LCP W LC +I++VAI+AD SKLA++GL+F++RW+ +G ARPPV+LSV
Sbjct: 265 EKCRATDQNKALCPSWKLCIFIAEVAIRADNSKLAYYGLEFMARWIVKGERARPPVLLSV 324
Query: 1034 DEGLTVSAMGTAARTCDLSLLKKAWEILMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAF 1213
DEGL VSA+ TA RT + LL AW +L RSL +K++LP+ E+YLAKI+A
Sbjct: 325 DEGLAVSALMTAGRTYNSELLGAAWAVLDRSL----------RKKKLPNPESYLAKIYAL 374
Query: 1214 AALGELKYAFRSLHELETAYGNSDAPEDLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQL 1393
A+LG L+ AF +LH+ E+AYGNSD D DLF PFTSL+PL +CSK GF LD+VYFQL
Sbjct: 375 ASLGNLQKAFGTLHDYESAYGNSDQEAD-DLFCPFTSLHPLSVACSKKGFETLDTVYFQL 433
Query: 1394 ESLSRADPPYKSVTALNCIILGCSYIWDLDRAFQTFESIQNTFELSPNVHSYNALMHAFG 1573
E+LS A+ PYKSV ALNC+I+G + IWDLDRA+QTFESI +TF L+ N+HSYN LM+AFG
Sbjct: 434 ENLSHAERPYKSVAALNCVIVGSANIWDLDRAYQTFESIASTFGLTHNIHSYNGLMYAFG 493
Query: 1574 RTKQTLEASNVFNHMTSLGVKPNELSYSLLIDAYLINRDTKSSLATIHDMMDDGFTPSQS 1753
+ + E S VF ++ + G+KPN SY LLIDA+LINRD KS++ + DM+ GF P +
Sbjct: 494 KVNKADEVSKVFGYIVNSGLKPNAKSYCLLIDAHLINRDVKSAMGVLDDMIAAGFEPMKG 553
Query: 1754 TLRKVRRRCVREFDNDGVEQVRSLCNKLKYRMIGEGRRDMLFNLNYSTSLAY 1909
TL+K+RRRC+REFD + E++ SL YRM EGRR+MLFNLNYST + +
Sbjct: 554 TLKKIRRRCIREFDTESDERLESLALSYNYRMGSEGRRNMLFNLNYSTEMVH 605
>ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutrema salsugineum]
gi|557093696|gb|ESQ34278.1| hypothetical protein
EUTSA_v10007071mg [Eutrema salsugineum]
Length = 625
Score = 611 bits (1575), Expect = e-172
Identities = 304/564 (53%), Positives = 417/564 (73%), Gaps = 1/564 (0%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
+QSLVP+G+ + QA A R+++ S LD++S+L++FADW SQ+W E+K
Sbjct: 85 SQSLVPMGFLN------------QAPAP-RIRAISETLDMNSLLNMFADWTASQRWSEMK 131
Query: 398 ELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASF 577
+LFE W++SLD++G+PN+PDVNLYNHYLRANLM V+ M +++L PNTAS+
Sbjct: 132 QLFEFWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASPSDMLDLVALMDDFSLAPNTASY 191
Query: 578 NLVLKAMFQSRETQAAVRLLDRMIHTGQDAS-PDEETYEIVVGLLFQENEIESALKYLDL 754
N+VLKAM Q+RET+AA +LL+RM+ +G++ S PD+E+Y++V+ LLF + A+K +DL
Sbjct: 192 NIVLKAMHQARETEAAQKLLNRMLMSGKEESVPDDESYDVVIELLFLTGNNDEAMKLMDL 251
Query: 755 ALKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAI 934
ALKSGYM+ST F+ CVR+CVA GR DTL IIE CKA+D+NKSLCP W LCTY+++VA+
Sbjct: 252 ALKSGYMLSTTAFSECVRSCVAKGRTDTLVSIIERCKALDRNKSLCPSWILCTYMAEVAV 311
Query: 935 QADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEI 1114
Q D SKLAF+ +F+ +W+ RG +A P V+LSVDEGL VSA+ TAARTC+ +L+ +W I
Sbjct: 312 QEDNSKLAFYAFEFMFKWITRGEMAWPLVLLSVDEGLVVSALATAARTCNPTLVDGSWMI 371
Query: 1115 LMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPE 1294
L RSL + ++ P+ +Y+AKI+A+A+LG L+ AF +LHE E AY +S+
Sbjct: 372 LKRSL----------RGKKAPNPASYIAKINAYASLGNLQKAFIALHEFENAYADSEKEV 421
Query: 1295 DLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIW 1474
++ SPFTSL PLV +CSK GF LD VYFQLE+LS+ + PYKSV ALNCIILGC+ W
Sbjct: 422 VEEILSPFTSLYPLVVACSKKGFETLDEVYFQLETLSQGETPYKSVAALNCIILGCANTW 481
Query: 1475 DLDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSY 1654
DLDRA+QTF++I +F L+PN+ SYNAL++AFG+ K+T EA+ V+ H+ S+GVKP+ +Y
Sbjct: 482 DLDRAYQTFDAISASFGLTPNIDSYNALIYAFGKVKKTFEATRVYEHLVSVGVKPDARTY 541
Query: 1655 SLLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNK 1834
SLL+DA+LINRD KS+L I DM++ GF P++ TL+KVRRRCVRE D + + V SL K
Sbjct: 542 SLLVDAHLINRDPKSALTVIDDMINAGFEPTKETLKKVRRRCVREIDYENNDHVESLAKK 601
Query: 1835 LKYRMIGEGRRDMLFNLNYSTSLA 1906
+ RM E RR+MLFNL+YS A
Sbjct: 602 FEIRMGSENRRNMLFNLDYSRGRA 625
>ref|XP_003518766.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X1 [Glycine max]
Length = 615
Score = 608 bits (1568), Expect = e-171
Identities = 301/532 (56%), Positives = 400/532 (75%), Gaps = 1/532 (0%)
Frame = +2
Query: 320 SHELDLHSMLDVFADWMTSQKWVEIKELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMX 499
S D ++LD+F DWM SQ+W ++K LFE W++SLD++G+PN+PDVNL+NHYLRANLM
Sbjct: 96 SDTYDPRALLDLFGDWMASQQWHDVKFLFESWVRSLDKTGKPNKPDVNLFNHYLRANLML 155
Query: 500 XXXXXXXXXFVSQMHNYA-LLPNTASFNLVLKAMFQSRETQAAVRLLDRMIHTGQDASPD 676
V+QM + + PNTASFNLVLKAM Q++ET AA +LL RM+ +G DA PD
Sbjct: 156 GASAAELLDLVAQMAEFDNVAPNTASFNLVLKAMCQAKETLAADKLLQRMLQSGNDALPD 215
Query: 677 EETYEIVVGLLFQENEIESALKYLDLALKSGYMISTNVFASCVRACVAAGRLDTLTKIIE 856
+E+Y++V+G+LF +I++A KY+DL LKSG ++S VF +CV +CV GRLDTL IIE
Sbjct: 216 DESYDLVIGMLFSMGQIDTAFKYIDLILKSGNVLSMKVFMNCVGSCVNKGRLDTLVTIIE 275
Query: 857 DCKAMDQNKSLCPPWNLCTYISDVAIQADISKLAFFGLDFLSRWMARGMVARPPVILSVD 1036
C+A DQNK+LCP W+LC +I ++A + D SKL+F+GL+F+++W+ +G RPP+ LSVD
Sbjct: 276 RCRASDQNKALCPNWDLCNFIVEIATREDNSKLSFYGLEFMAKWIVKGERQRPPIYLSVD 335
Query: 1037 EGLTVSAMGTAARTCDLSLLKKAWEILMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFA 1216
EGL +SA+ TA RT + LL +W +L RSL +K+++P+ E+YL KI+A A
Sbjct: 336 EGLVLSALLTAGRTYNSDLLVASWAVLDRSL----------RKKKVPNPESYLGKIYALA 385
Query: 1217 ALGELKYAFRSLHELETAYGNSDAPEDLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLE 1396
+LG L+ AF +L+E E AYG+S E DLF PFTSL+PLV +CSK GF LD+VYFQLE
Sbjct: 386 SLGNLQKAFGTLNEYEAAYGDS-GQEAEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLE 444
Query: 1397 SLSRADPPYKSVTALNCIILGCSYIWDLDRAFQTFESIQNTFELSPNVHSYNALMHAFGR 1576
+L+RA+PPYKSV ALNC+ILGC+ IWDLDRA+QTFESI +TF L P++HSYN LM+AFG+
Sbjct: 445 NLNRAEPPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLIPDIHSYNGLMYAFGK 504
Query: 1577 TKQTLEASNVFNHMTSLGVKPNELSYSLLIDAYLINRDTKSSLATIHDMMDDGFTPSQST 1756
K+T EA+ VF H+ SLG+KPN SYSLL+DA+LINRD KS+LA I DM G+ PS+
Sbjct: 505 LKKTHEATRVFEHLVSLGLKPNAKSYSLLVDAHLINRDVKSALAVIDDMRAAGYEPSKEV 564
Query: 1757 LRKVRRRCVREFDNDGVEQVRSLCNKLKYRMIGEGRRDMLFNLNYSTSLAYA 1912
L+KVRRRC+RE DN+ +V+SL N L YR+ E RRD+LFNLNYS S+ YA
Sbjct: 565 LKKVRRRCMREMDNESDARVQSLVNSLNYRLGSENRRDILFNLNYS-SMGYA 615
>ref|XP_003516357.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like isoform X1 [Glycine max]
Length = 616
Score = 604 bits (1557), Expect = e-170
Identities = 295/529 (55%), Positives = 395/529 (74%)
Frame = +2
Query: 320 SHELDLHSMLDVFADWMTSQKWVEIKELFEQWIKSLDQSGRPNRPDVNLYNHYLRANLMX 499
S D ++LD+F DWM SQ+W ++K LFE W++SLD++G+PN+PDVNL+NHYLRANLM
Sbjct: 99 SETYDPRALLDLFGDWMASQQWHDVKFLFEAWVRSLDKTGKPNKPDVNLFNHYLRANLML 158
Query: 500 XXXXXXXXXFVSQMHNYALLPNTASFNLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDE 679
V+QM + + PNTASFNLVLKAM Q++ET AA +LL RM+ +G DA PD+
Sbjct: 159 GASAAELLDLVAQMAEFDVAPNTASFNLVLKAMCQAKETLAADKLLQRMLQSGNDALPDD 218
Query: 680 ETYEIVVGLLFQENEIESALKYLDLALKSGYMISTNVFASCVRACVAAGRLDTLTKIIED 859
E+Y++V+G+LF ++I++A KY+DL LKSG ++S VF +C +CV GRLDTL IIE
Sbjct: 219 ESYDLVIGMLFSMDQIDTAFKYIDLILKSGNVLSMKVFMNCAGSCVNKGRLDTLVTIIER 278
Query: 860 CKAMDQNKSLCPPWNLCTYISDVAIQADISKLAFFGLDFLSRWMARGMVARPPVILSVDE 1039
C+A DQNK+LCP W+LC +I ++A + D SKLAF+GL+F+++W+ +G RPP+ +SVDE
Sbjct: 279 CRASDQNKALCPNWDLCNFIVEIATREDNSKLAFYGLEFMAKWIVKGERQRPPIYISVDE 338
Query: 1040 GLTVSAMGTAARTCDLSLLKKAWEILMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAA 1219
GL +SA+ TA RT + LL +W +L RSL +K++ P+ E+YL KI+A A+
Sbjct: 339 GLVLSALLTAGRTYNTDLLVASWAVLDRSL----------RKKKAPNPESYLGKIYAHAS 388
Query: 1220 LGELKYAFRSLHELETAYGNSDAPEDLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLES 1399
LG L+ AF +L+E E+AYG+S E DLF PFTSL+PLV +CSK GF LD+VYFQLE+
Sbjct: 389 LGNLQKAFGTLNEYESAYGDS-GQEAEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLEN 447
Query: 1400 LSRADPPYKSVTALNCIILGCSYIWDLDRAFQTFESIQNTFELSPNVHSYNALMHAFGRT 1579
L+RA+PPYKSV ALNC+ILGC+ IWDLDRA+QTFESI +TF L P++HSYN L++AFG+
Sbjct: 448 LNRAEPPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLIPDIHSYNGLIYAFGKL 507
Query: 1580 KQTLEASNVFNHMTSLGVKPNELSYSLLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTL 1759
K+T EA+ VF H+ SLG+K N SYSLL+DA+LINRD KS+LA I DM G+ PS+ L
Sbjct: 508 KKTHEATRVFEHLVSLGLKSNAKSYSLLVDAHLINRDVKSALAVIDDMRAAGYEPSKEML 567
Query: 1760 RKVRRRCVREFDNDGVEQVRSLCNKLKYRMIGEGRRDMLFNLNYSTSLA 1906
+KVRRRC RE DN+ +V+SL N L Y++ E RRD+LFNLNYS A
Sbjct: 568 KKVRRRCTREMDNESDARVQSLANSLNYQLGSENRRDILFNLNYSMGYA 616
>ref|XP_002315005.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329962|gb|EEF01176.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 623
Score = 601 bits (1550), Expect = e-169
Identities = 303/562 (53%), Positives = 406/562 (72%), Gaps = 3/562 (0%)
Frame = +2
Query: 230 VPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIKELFE 409
+PI Y + + M PF + ++R+QS +DL+S+ ++ ADW TSQ+W +IK FE
Sbjct: 77 IPI-YQNPNSPMIPLGPFH--NQTSRIQSMPPNMDLNSLSNMLADWTTSQRWEDIKGYFE 133
Query: 410 QWIKSLDQSGRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTASFNLVL 589
WIKSLD++G+PN+PDV+LYNHYLRANLM V+QM ++ L PNT SFN VL
Sbjct: 134 AWIKSLDRNGKPNKPDVSLYNHYLRANLMMKASAGYLLDLVAQMEDFNLSPNTVSFNFVL 193
Query: 590 KAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIES---ALKYLDLAL 760
KAM++ ET+AA +LL R+ + G PDEE+Y++VV +L + I++ ALKY+D L
Sbjct: 194 KAMYEGLETEAAEKLLQRLANFG--LFPDEESYDLVVTMLLNKGNIDAFDTALKYIDKIL 251
Query: 761 KSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAIQA 940
K Y++S VF +CVR+C GRLD L IIE CK MDQNK+LCP WNLC +I+++A++
Sbjct: 252 KGDYVLSMKVFDACVRSCCNFGRLDVLLSIIEKCKKMDQNKALCPNWNLCNHIAEIALKE 311
Query: 941 DISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEILM 1120
D SKL F L+F++RW+ARG ARP V+LSVDEGL V+A+GTA RT + +LL +W IL
Sbjct: 312 DNSKLLFCALEFMARWIARGEKARPIVLLSVDEGLIVAALGTAGRTYNSTLLDASWAILR 371
Query: 1121 RSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPEDL 1300
RSL ++++ P+ E+Y+ KI+A A+LG L+ AF +L ELE+ YG+SD +
Sbjct: 372 RSL----------RQKKAPNPESYIGKIYAHASLGSLQKAFATLRELESCYGSSDKEAEE 421
Query: 1301 DLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIWDL 1480
+LFSPF+SLNPLV +CSK GF LDSVYFQLE+LSRA+ PYKSV ALNCIILGC+ IWDL
Sbjct: 422 ELFSPFSSLNPLVLACSKKGFETLDSVYFQLENLSRAESPYKSVAALNCIILGCANIWDL 481
Query: 1481 DRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSYSL 1660
DRA+QTFE+I ++F L+PN+HSYNAL+ AFGR K+T EASNVF H+ SLGVKPN +SYSL
Sbjct: 482 DRAYQTFEAISSSFGLTPNIHSYNALIFAFGRLKKTFEASNVFEHLVSLGVKPNAMSYSL 541
Query: 1661 LIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNKLK 1840
L+DA+LINRDTK+++ I M GF PS+ L+KV+RRC+RE + + ++V K
Sbjct: 542 LVDAHLINRDTKAAVLVIDKMDSAGFVPSKEILKKVKRRCIREMEYESDDRVEFWARKFD 601
Query: 1841 YRMIGEGRRDMLFNLNYSTSLA 1906
YR+ + RRD+LFNL YST A
Sbjct: 602 YRLGSQNRRDLLFNLEYSTDFA 623
>ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 601 bits (1550), Expect = e-169
Identities = 302/560 (53%), Positives = 403/560 (71%), Gaps = 1/560 (0%)
Frame = +2
Query: 218 AQSLVPIGYASGDQSMARSSPFGQASASARLQSFSHELDLHSMLDVFADWMTSQKWVEIK 397
A SL+P ++ +SPF R+ +FS L + + FA+WMT Q+W E+K
Sbjct: 81 ASSLLP--------AVVSASPF----THHRMAAFSATLGAAELKETFAEWMTEQRWDEMK 128
Query: 398 ELFEQWIKSLDQS-GRPNRPDVNLYNHYLRANLMXXXXXXXXXXFVSQMHNYALLPNTAS 574
+LFE W++SLD S G+PNRPDV+L+NHYLRAN M QM + + PNTAS
Sbjct: 129 QLFEFWVRSLDASTGKPNRPDVDLFNHYLRANFMSGALPHEMLDLADQMREFEISPNTAS 188
Query: 575 FNLVLKAMFQSRETQAAVRLLDRMIHTGQDASPDEETYEIVVGLLFQENEIESALKYLDL 754
NL+LK+M ++RE + A +L++RM+ TG PD+E+Y +VV LL ++N ++SALKYLDL
Sbjct: 189 HNLILKSMVRAREVEGAEKLVERMLLTG--TVPDDESYNLVVDLLIKQNRVDSALKYLDL 246
Query: 755 ALKSGYMISTNVFASCVRACVAAGRLDTLTKIIEDCKAMDQNKSLCPPWNLCTYISDVAI 934
LKSGYMIS+ VFA CVR C+ +GRLDTL +IE CKA D+NK LCP W C I++ A
Sbjct: 247 MLKSGYMISSTVFADCVRECIRSGRLDTLASVIEKCKATDKNKVLCPQWAWCIGIAEAAF 306
Query: 935 QADISKLAFFGLDFLSRWMARGMVARPPVILSVDEGLTVSAMGTAARTCDLSLLKKAWEI 1114
+A+ SKLA F L+FL+RWMARG A PP+ LSVDEGL +SA+ A RTC LL AW I
Sbjct: 307 EANNSKLAMFALEFLARWMARGERASPPIHLSVDEGLVLSALSAAGRTCSTDLLNAAWSI 366
Query: 1115 LMRSLXXXXXXXXEEKKRRLPSAEAYLAKIHAFAALGELKYAFRSLHELETAYGNSDAPE 1294
L +SL +++R P+ EAYLAKI+A +++G+L+ AF +L E E AYGNS+
Sbjct: 367 LRKSL----------RQKRAPTPEAYLAKIYAHSSIGQLQRAFGTLREFENAYGNSENI- 415
Query: 1295 DLDLFSPFTSLNPLVRSCSKGGFAVLDSVYFQLESLSRADPPYKSVTALNCIILGCSYIW 1474
D++LFSPF SL PLV +C K GF LDSVY QLE+LS ADPPYKSV ALNC+I+GC+ IW
Sbjct: 416 DIELFSPFMSLQPLVVACCKDGFTTLDSVYVQLENLSSADPPYKSVAALNCVIVGCANIW 475
Query: 1475 DLDRAFQTFESIQNTFELSPNVHSYNALMHAFGRTKQTLEASNVFNHMTSLGVKPNELSY 1654
DL+RA++TFE+++ F L+P++HSYNAL++AFG+ K+T EA NVF H+ SL VKPN +Y
Sbjct: 476 DLERAYETFEALKEKFGLTPDIHSYNALLYAFGKLKKTEEACNVFQHLVSLDVKPNSTTY 535
Query: 1655 SLLIDAYLINRDTKSSLATIHDMMDDGFTPSQSTLRKVRRRCVREFDNDGVEQVRSLCNK 1834
SLL+DA+L+NRD K++LA I +M+D GFTPS+ TL+KVRRRC RE D D E+++SLC +
Sbjct: 536 SLLVDAHLVNRDPKAALAVIDEMVDVGFTPSKETLKKVRRRCSRESDFDSDEKLQSLCKQ 595
Query: 1835 LKYRMIGEGRRDMLFNLNYS 1894
L RM GEGRR++L+N+ YS
Sbjct: 596 LNCRMGGEGRRELLYNIEYS 615