BLASTX nr result

ID: Ephedra28_contig00004788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004788
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21315.1| unknown [Picea sitchensis] gi|224286171|gb|ACN407...    65   1e-08
gb|AAB01557.1| mitochondria-localized low molecular weight heat ...    65   1e-08
emb|CAC81962.1| small heat-shock protein [Picea glauca]                64   2e-08
gb|ABK26552.1| unknown [Picea sitchensis]                              62   8e-08
gb|ABK27152.1| unknown [Picea sitchensis] gi|224285650|gb|ACN405...    59   9e-07
gb|ABK21453.1| unknown [Picea sitchensis]                              59   9e-07
emb|CAM12501.1| small heat-shock protein [Pinus taeda]                 57   3e-06
gb|ABK22877.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABK21315.1| unknown [Picea sitchensis] gi|224286171|gb|ACN40796.1| unknown
           [Picea sitchensis]
          Length = 215

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALVANAPAGQ-------RNLSTALNRRNEDIDEAMPETRRASDLSGS--- 353
           ++ V+P+V++ L+ +   G        R+LSTA  +   + D A+ + ++    S +   
Sbjct: 12  MKSVIPAVKKCLLPSGRPGDSAASAMCRSLSTAAAKYRPEYDSAIQDDKQNRQASETRRG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPFL                 WDAVE+++ L LRV
Sbjct: 72  GLPNIFGDPFYPLRSLGFGLDQLFDNPFLAASRGTGDAVRGGSRKPWDAVEDKEALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>gb|AAB01557.1| mitochondria-localized low molecular weight heat shock protein 23.5
           [Picea glauca]
          Length = 215

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALVANAPAGQ-------RNLSTALNRRNEDIDEAMPE---TRRASDLSGS 353
           ++ V+P+V++ L+ +   G        R+LSTA  +   + D A+ +    R+AS+    
Sbjct: 12  MKSVIPAVKKCLLPSGRQGDSSASAMCRSLSTAAAKYRPEYDSAIQDDTQNRQASETRRG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPFL                 WDAVE+++ L LRV
Sbjct: 72  GLPNIFGDPFYPLRSLGFGLDQLFDNPFLAASRGTGDAVRGGSRKPWDAVEDKEALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>emb|CAC81962.1| small heat-shock protein [Picea glauca]
          Length = 215

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALV-------ANAPAGQRNLSTALNRRNEDIDEAMPETRRASDLSGS--- 353
           ++ V+P+V++ L+       + A A  R+LSTA  +   + D A+ + ++    S +   
Sbjct: 12  MKSVIPAVKKCLLPLGRPGDSAASATCRSLSTAAAKYRPEYDSAIQDDKQDRQASETRRG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPFL                 WDAVE+++ L LRV
Sbjct: 72  GLPNIFGDPFYPLRSLGFGLDQLFDNPFLAASRGTGDAVRGGSRKPWDAVEDKEALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>gb|ABK26552.1| unknown [Picea sitchensis]
          Length = 215

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALVANAPAGQ-------RNLSTALNRRNEDIDEAMPETRRASDLSGS--- 353
           ++ V+P+V++ L+ +   G        R+LSTA  +   + D A+ + ++    S +   
Sbjct: 12  MKSVIPAVKKCLLPSGRPGDSAASAMCRSLSTAAAKYRPEYDSAIQDDKQNRQASETRRG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPFL                 W AVE+++ L LRV
Sbjct: 72  GLPNIFGDPFYPLRSLGFGLDQLFDNPFLAASRGTGDAVRGGSRKPWHAVEDKEALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>gb|ABK27152.1| unknown [Picea sitchensis] gi|224285650|gb|ACN40541.1| unknown
           [Picea sitchensis] gi|224286328|gb|ACN40872.1| unknown
           [Picea sitchensis] gi|224286656|gb|ACN41032.1| unknown
           [Picea sitchensis]
          Length = 215

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALV-------ANAPAGQRNLST-ALNRRNEDID--EAMPETRRASDLSGS 353
           V+ V+P V++ L        + A A +R+LST AL  R E+    E   + R+AS++ G 
Sbjct: 12  VKSVIPVVKKCLWPAGRPGDSAASAMRRSLSTNALKYRPEEDSSIEDGRQRRQASEIRGG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPF+                 WD  E  D L LRV
Sbjct: 72  GLSNVFDDPFYPLRSLGFGLDQLFDNPFVASSRGTGDALRGGSRKPWDVNEERDALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>gb|ABK21453.1| unknown [Picea sitchensis]
          Length = 215

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 21/122 (17%)
 Frame = +3

Query: 204 VRGVVPSVRRALV-------ANAPAGQRNLST-ALNRRNEDID--EAMPETRRASDLSGS 353
           V+ V+P V++ L        + A A +R+LST AL  R E+    E   + R+AS++ G 
Sbjct: 12  VKSVIPVVKKCLWPAGRPGDSAASAMRRSLSTNALKYRPEEDSSIEDGRQRRQASEIRGG 71

Query: 354 -------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDAVENEDTLELRV 500
                  DP YP R  G GLD+LFDNPF+                 WD  E  D L LRV
Sbjct: 72  GLSNVFDDPFYPLRSLGFGLDQLFDNPFVASSRGTGDALRGGSRKPWDVNEERDALHLRV 131

Query: 501 DM 506
           DM
Sbjct: 132 DM 133


>emb|CAM12501.1| small heat-shock protein [Pinus taeda]
          Length = 213

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
 Frame = +3

Query: 177 MAMANGLKA--VRGVVPSVRRALVANAPAGQ-------RNLSTALNRRNEDIDEAMP--- 320
           MA A   K+  ++ +VP+V++ L+ +A  G        R LSTA  +   + D ++    
Sbjct: 1   MATAVSAKSNVLKSIVPAVKKCLLPSARPGDSAASVMCRGLSTAAVKYRPEDDSSIQDDR 60

Query: 321 ETRRASDLSGS-------DPLYPFRGFGMGLDRLFDNPFL----XXXXXXXXXXXXXWDA 467
           E R+A ++          D  +P R  G GLD+LFDNPFL                 W+A
Sbjct: 61  ERRQAPEIRRGGWPNILEDSFFPLRNLGFGLDQLFDNPFLAASRGTGDVIRGGPRKPWEA 120

Query: 468 VENEDTLELRVDM 506
           VE+++ L LRVDM
Sbjct: 121 VEDKEALYLRVDM 133


>gb|ABK22877.1| unknown [Picea sitchensis]
          Length = 208

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 21/125 (16%)
 Frame = +3

Query: 195 LKAVRGVVPSVRRALVANAPAGQ-------RNLSTA----LNRRNEDIDEAMPE---TRR 332
           +  ++ V+P++++ L+ +   G        R+LSTA    + R   + D ++ +   +RR
Sbjct: 9   INVMKSVIPTIKKCLLPSGRPGDSAASAMCRSLSTAAAMRIRRFRPEDDPSIQDDKQSRR 68

Query: 333 ASDLSG-------SDPLYPFRGFGMGLDRLFDNPFLXXXXXXXXXXXXXWDAVENEDTLE 491
           AS+           D  YP R  G GLD+LFDNPFL             WDA+E+++ L 
Sbjct: 69  ASETLRRGWPNIFEDSCYPLRNLGFGLDQLFDNPFL-------AASRNPWDAIEDKEALH 121

Query: 492 LRVDM 506
           L VDM
Sbjct: 122 LGVDM 126


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