BLASTX nr result

ID: Ephedra28_contig00004585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004585
         (1985 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A...   239   2e-60
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   235   6e-59
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   224   1e-55
gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus pe...   221   1e-54
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]     218   6e-54
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor...   215   6e-53
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor...   215   6e-53
ref|XP_001764602.1| predicted protein [Physcomitrella patens] gi...   215   6e-53
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   214   8e-53
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor...   211   9e-52
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     210   2e-51
ref|XP_001764406.1| predicted protein [Physcomitrella patens] gi...   209   4e-51
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   203   3e-49
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...   202   4e-49
ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [S...   201   1e-48
ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like is...   200   2e-48
ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like is...   200   2e-48
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   200   2e-48
ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [S...   199   4e-48
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C...   198   6e-48

>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
            gi|548842109|gb|ERN02066.1| hypothetical protein
            AMTR_s00045p00141060 [Amborella trichopoda]
          Length = 781

 Score =  239 bits (611), Expect = 2e-60
 Identities = 212/648 (32%), Positives = 290/648 (44%), Gaps = 43/648 (6%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV-------NKVGKRLKVWENE-----------DAVLPGKPSPGGKD 253
            +++  ELLWE G +V       N+       + +            DAVLP   S GG+ 
Sbjct: 111  DHEFVELLWENGQIVLQGQTSRNRKDASSSGYSSHPPKTHLNHNSGDAVLP-VASKGGRY 169

Query: 254  NTLDSVAPEIASSSGNS---LHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDS 424
             TL+SV  + +S   +    + EDE+  +L YPLDDS ER+YCS+FF  +      L   
Sbjct: 170  GTLESVLHDFSSGQASGCPLVQEDEMVPWLNYPLDDSLERDYCSEFFPELSG--VNLTPL 227

Query: 425  MGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFASQGRMSKEAMTPK 604
               ++  +++++ +++T                NLS               M   +  P 
Sbjct: 228  SKPTNVVVSEKACNLDTTSH------------KNLS---------------MEHSSQAPS 260

Query: 605  ALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSP-CKKGSGQ 781
             L RA  P       SQ G    P +R        ++ +  H S+  +  SP      G 
Sbjct: 261  RL-RALQPFN-----SQQGQPSNPILR--------QFPSNTHKSSCGNSSSPGANPAIGI 306

Query: 782  VSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXXXXXX 961
            V++        +P      P +   + L+NFSHFSRPA  +KANLQ              
Sbjct: 307  VNSKTE-----QPNHGSTRPPQPTHTNLMNFSHFSRPAALVKANLQSMGMAGRLKNNN-- 359

Query: 962  XKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRKTSDATAT 1141
               DK  V  ++P E SI++S      AV S S    K +   Q   ++   K  D +++
Sbjct: 360  ---DKASVTDSNPVESSIVDS------AVVSKS---GKTKLDQQCQASLHPTKAKDISSS 407

Query: 1142 CS-------------EDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPEATV 1282
             +             ED + S  +  D+  C +S F   S A G +E    V    E  V
Sbjct: 408  PAREKQSVEEDVMYVEDASTSQNRSPDRTLCPSSSFAA-STALGISESVKAV----EPVV 462

Query: 1283 TXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPRT-TSKRS 1459
                        R  KE ++  KRK    E+S  QSEDVE ES+  +K    R+ T+KRS
Sbjct: 463  ASSSVCSGNSGGRVSKEPRHGLKRKVGEQEESGYQSEDVEGESVGTRKQATGRSATTKRS 522

Query: 1460 RAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXX 1639
            RAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+    
Sbjct: 523  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMA 582

Query: 1640 XXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXXXXXXXR----PVMPL 1807
                  PM++   MQH   P M H S +                           P++PL
Sbjct: 583  SGMCMPPMMMTAGMQHMPPPHMTHFSPMGVGMGMGMGIGMGMGMGMLDIGGSPGCPLIPL 642

Query: 1808 PSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCP---GPGMQLSGHP 1942
            PS+    +P S++   G M + GMPGSN  M   P    P +  SG P
Sbjct: 643  PSIRGPQIPCSSI--SGPMGLPGMPGSNLQMYGMPMARAPFLPFSGFP 688


>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  235 bits (599), Expect = 6e-59
 Identities = 208/674 (30%), Positives = 288/674 (42%), Gaps = 39/674 (5%)
 Frame = +2

Query: 62   SDTVSITKGYWDILQPKR---SMPLENDLEELLWEKGPVVNK-VGKRLKVWENEDAVLPG 229
            S+   + KG  + +Q K    S   END  EL+WE G ++ +    R +     ++    
Sbjct: 4    SELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSFPSH 63

Query: 230  KPSPGGKDN----------------TLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFE 361
             P P  KD                  L+     + S+      +D++  +L YP+D+S +
Sbjct: 64   TPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDESLQ 123

Query: 362  REYCSDFFEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNM 541
             +YCSDF + +             S  T+N+ STH N     F +GE  +     +  + 
Sbjct: 124  HDYCSDFLQEL-------------SGVTVNELSTHCN-----FASGEKRNSNNQTIKDSN 165

Query: 542  TIGATNFAS--QGRMSKEAMTPKALDRAATPGTGRSVV-----SQNGSDFFPRIRTATQS 700
            TI A N  S  QG  SK +           P   RS       SQ     FP +R+    
Sbjct: 166  TISAHNGVSLEQGNASKASAA------GVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSD 219

Query: 701  PLSKWQTGLHASNSKDIQSPCKKGSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSH 880
            P+S        + S  +       S ++ A+ S     K Q  D    +++ S L+NFSH
Sbjct: 220  PISN-------NTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTRNN-SGLMNFSH 271

Query: 881  FSRPAVNIKANLQXXXXXXXXXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSS 1060
            FSRPA  +KANLQ                 D++  +   PA      S N   +    SS
Sbjct: 272  FSRPAALVKANLQNIGAIAGPSSSSK----DRIGSKDKQPAA----SSRNPAESRHVDSS 323

Query: 1061 CANSKVQGTYQNNQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQN----SEFGRRSLA 1228
            C   K   ++  ++ ++   + D     ++   +        V CQ     +E     + 
Sbjct: 324  CGLQKDVDSH--SEPVMVPASVDLKPVVAKTMEEPLPAEQSPVICQEGACKNEKSSNQVL 381

Query: 1229 SGATEKCGEVGDGP---EATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDV 1399
               T K   + DG    E  V            R   + +++ KRK R  E+SEC SEDV
Sbjct: 382  GARTAK--GIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDV 439

Query: 1400 EFESMERKKPVPPR--TTSKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKAS 1573
            E ES+  +K  P +  T SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKAS
Sbjct: 440  EEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS 499

Query: 1574 MLDEAIEYLKTLQLQVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXX 1753
            MLDEAIEYLKTLQLQVQ+          PM++P  MQH     M H   +          
Sbjct: 500  MLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGMGMGM 559

Query: 1754 XXXXXXXXXXXXRPVMPL---PSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGM 1924
                         P  P    P M  +  PG  +      ++ GM GSN  +   PG G+
Sbjct: 560  GYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISV--PPNLHGMVGSNLQVFGLPGQGI 617

Query: 1925 QLSGHPISNIAMSG 1966
             LS      I MSG
Sbjct: 618  PLSMPHAPLIPMSG 631


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  224 bits (571), Expect = 1e-55
 Identities = 199/656 (30%), Positives = 278/656 (42%), Gaps = 37/656 (5%)
 Frame = +2

Query: 62   SDTVSITKGYWDILQPKR---SMPLENDLEELLWEKGPVVNK-VGKRLKVWENEDAVLPG 229
            S+   + KG  + +Q K    S   END  EL+WE G ++ +    R +     ++    
Sbjct: 4    SELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSFPSH 63

Query: 230  KPSPGGKDN----------------TLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFE 361
             P P  KD                  L+     + S+      +D++  +L YP+D+S +
Sbjct: 64   TPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDESLQ 123

Query: 362  REYCSDFFEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNM 541
             +YCSDF + +             S  T+N+ STH N     F +GE  +     +  + 
Sbjct: 124  HDYCSDFLQEL-------------SGVTVNELSTHCN-----FASGEKRNSNNQTIKDSN 165

Query: 542  TIGATNFAS--QGRMSKEAMTPKALDRAATPGTGRSVV-----SQNGSDFFPRIRTATQS 700
            TI A N  S  QG  SK +           P   RS       SQ     FP +R+    
Sbjct: 166  TISAHNGVSLEQGNASKASAA------GVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSD 219

Query: 701  PLSKWQTGLHASNSKDIQSPCKKGSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSH 880
            P+S        + S  +       S ++ A+ S     K Q  D    +++ S L+NFSH
Sbjct: 220  PISN-------NTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTRNN-SGLMNFSH 271

Query: 881  FSRPAVNIKANLQXXXXXXXXXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSS 1060
            FSRPA  +KANLQ                 D++  +   PA      S N   +    SS
Sbjct: 272  FSRPAALVKANLQNIGAIAGPSSSSK----DRIGSKDKQPAA----SSRNPAESRHVDSS 323

Query: 1061 CANSKVQGTYQNNQNMLTRKTSDATATCSEDFTDSTTKVSDQV-----TCQNSEFGRRSL 1225
            C   K   ++  ++ ++   + D     ++   +        V     T +    G +S+
Sbjct: 324  CGLQKDVDSH--SEPVMVPASVDLKPVVAKTMEEPLPAEQSPVHLPRRTAKGIPDGEKSI 381

Query: 1226 ASGATEKCGEVGDGPEATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEF 1405
                   C  V  G                 R   + +++ KRK R  E+SEC SEDVE 
Sbjct: 382  EPAVA--CSSVCSGNSVE-------------RASNDPKHNLKRKCRDTEESECPSEDVEE 426

Query: 1406 ESMERKKPVPPR--TTSKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASML 1579
            ES+  +K  P +  T SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASML
Sbjct: 427  ESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASML 486

Query: 1580 DEAIEYLKTLQLQVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXX 1759
            DEAIEYLKTLQLQVQ+          PM++P  MQH     M H   +            
Sbjct: 487  DEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGMGMGMGY 546

Query: 1760 XXXXXXXXXXRPVMPL---PSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGP 1918
                       P  P    P M  +  PG  +      ++ GM GSN  +   PGP
Sbjct: 547  GMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISV--PPNLHGMVGSNLQVFGLPGP 600


>gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  221 bits (562), Expect = 1e-54
 Identities = 205/643 (31%), Positives = 284/643 (44%), Gaps = 43/643 (6%)
 Frame = +2

Query: 131  NDLEELLWEKG--------------PVVNKVGKRLKVWENEDAVLPGKPSPGGKDNTLDS 268
            ND  EL+WE G              P  N           +  V  G  +  GK  +++S
Sbjct: 23   NDFVELVWENGQIMMQGQSSRTRKSPTCNNSLPSYTPKNRDKDVGNGNIAKTGKFGSVES 82

Query: 269  VAPEIASSSGNS----LHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGAS 436
            V  EI  S  +S      +DE+  +L Y +D+    EYC +F   +             S
Sbjct: 83   VLDEIPLSVPSSEMGLSEDDEMLPWLNYSIDEPLHHEYCDEFLPEL-------------S 129

Query: 437  SATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFASQGRMSKEAMTPK--AL 610
            + T N+ S++ N      M    SS Q    S       TN A +G   ++   PK  ++
Sbjct: 130  TVTANEISSNSNLAS---MDKRSSSSQVYRDSN------TNSAHEGAYLEQRNAPKVASI 180

Query: 611  DRA--ATPGTGRSVV----SQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCK-K 769
            D A  + P TG S +    SQ     FP  R+            +   N+ +   P   K
Sbjct: 181  DGADVSRPRTGTSQLYPLSSQQSQSLFPSFRSRVSD--------IVGDNTGNATHPTVCK 232

Query: 770  GSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXX 949
             S QVS+        K Q  D     ++ S +VNFSHFSRPA  +K+NLQ          
Sbjct: 233  NSTQVSSA-GVFPGIKMQRQDPVMPSNNNSSVVNFSHFSRPAALVKSNLQSIGVVAGSGL 291

Query: 950  XXXXXKLDKLRVEG---NSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNN------- 1099
                   +K +V     N+P E ++I+S++   +  ++S C +  V    +         
Sbjct: 292  SSMEKIGNKGKVSAATSNNPPESTLIDSSS-GLSKESNSQCQHITVTSNVELKPTEAKPL 350

Query: 1100 QNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPEAT 1279
            +     K S+A   C ED + + T  ++ + C+++    R L  G  EK  E        
Sbjct: 351  EESCAAKQSEAA--CQEDASKNDTN-TNHIPCESAN---RVLRDG--EKTLE-------P 395

Query: 1280 VTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPRTT-SKR 1456
            V            R   +  ++ KRK R  ++SEC S+DVE ES+  KK    R   SKR
Sbjct: 396  VVASSVCSGNSVERGSDDPTHALKRKSRDTDESECHSDDVEEESVGVKKIAHARGMGSKR 455

Query: 1457 SRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXX 1636
            SRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+   
Sbjct: 456  SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 515

Query: 1637 XXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXXXXXXXR-----PVM 1801
                   PM+ P  MQH   P+MAH S +                            P++
Sbjct: 516  GAGLYMPPMMFPAGMQHMHAPRMAHFSPMGLGMGMGMGLGMGFGMGMPDMNGGSSSFPML 575

Query: 1802 PLPSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQL 1930
             +P M  +  P S +   G  + +GM GSN  M   PG G+ +
Sbjct: 576  QVPPMQGAHFPNSPM--AGHTAFNGMVGSNLQMFGLPGQGVPM 616


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
          Length = 713

 Score =  218 bits (556), Expect = 6e-54
 Identities = 194/635 (30%), Positives = 266/635 (41%), Gaps = 32/635 (5%)
 Frame = +2

Query: 116  SMPLENDLEELLWEKGPVVNKVGKRLKVWENEDA-VLPGKPSPGGKD------------- 253
            S   END  EL+WE G VV + G+  +  +N     LP   +P  +D             
Sbjct: 16   SQDFENDFLELVWENGQVVMQ-GQSSRTRKNPSCNTLPSYNTPKNRDRDVGNSNIGKTGK 74

Query: 254  ------NTLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYML 415
                  + LD +   + SS      +D+   +L Y +D+    EYC DF           
Sbjct: 75   FGFVVDSELDEIPLSVPSSEMGLSEDDDTLPWLNYSIDEPLHHEYCHDFLPEF------- 127

Query: 416  RDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFASQGRMSKEAM 595
                  SSAT N+ S++ N      +    SS Q    S   +        Q  + K A+
Sbjct: 128  ------SSATANEASSNHNLAS---IDKRSSSSQVLRDSNPNSAHEDACLQQRNVGKVAL 178

Query: 596  TPKALDRAATPGTGR--SVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKK 769
              +A       GT +  S+ SQ     +P  R+          +  H    +D+     +
Sbjct: 179  IGRADVSRPRTGTSQLHSLSSQQSQASYPSFRSRVSDTAGDNTSATH----RDVGKNSTQ 234

Query: 770  GSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXX 949
             S    +    +L P P    V P  ++ S +VNFSHFSRPA  +KAN+Q          
Sbjct: 235  ISSAGGSPGMKILRPDP----VTPSNNNPS-IVNFSHFSRPAALVKANVQTNGVMAGSGS 289

Query: 950  XXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRKTSD 1129
                   +K +         S   SNN   +    SS +  K   +    Q +L R + +
Sbjct: 290  SSMIRIANKDKF--------SAATSNNLPESMPIDSSSSAPKESNS--QCQQILVRSSVE 339

Query: 1130 ATATCSEDFTDSTTKVSDQVTCQNS----EFGRRSLASGATEKCGEVGDGPEATVTXXXX 1297
               T ++   +  T    + TCQ      +     +   +  +    G+     V     
Sbjct: 340  LKPTEAKPLEEPCTAKQSEGTCQEETSKDDINSNHIPCESAVRVSPNGEKTVEPVVASSV 399

Query: 1298 XXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPRTT-SKRSRAAEV 1474
                   R   +   + KRK R  ++SEC S+DVE E M  KK    R   SKRSRAAEV
Sbjct: 400  CSGNSVERGSDDPTQALKRKFRETDESECHSDDVEEEYMGVKKGDHARGMGSKRSRAAEV 459

Query: 1475 HNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXXXXXX 1654
            HNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+         
Sbjct: 460  HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGMYM 519

Query: 1655 APMVIPGSMQHFQVPQMAHLSHL-----XXXXXXXXXXXXXXXXXXXXXXRPVMPLPSMH 1819
             PM++P  MQH   P MAH S +                            P++ +P M 
Sbjct: 520  PPMMLPPGMQHMHGPCMAHFSPMGVGMGMGMGLGMGFGMGMPDMNGASSSYPMLQVPPMQ 579

Query: 1820 VSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGM 1924
             +  PGS  H  G  + +GM GSN  M   P  G+
Sbjct: 580  GAHFPGS--HMAGHTAFNGMMGSNLQMFGLPSQGV 612


>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  215 bits (547), Expect = 6e-53
 Identities = 211/652 (32%), Positives = 285/652 (43%), Gaps = 39/652 (5%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV----NKVGKRLKVWEN---------------EDAVLPGKPSPGGK 250
            END  EL+ E G ++    +   +R+    +               +D    G  +  GK
Sbjct: 33   ENDFVELVLENGQILMQGQSSKARRIPACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGK 92

Query: 251  DNTLDSVAPEI---ASSSGNSLHED-EVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLR 418
              T+DSV  EI     S+  SL++D EV  +L YP+D S + EY SDF   +        
Sbjct: 93   FGTIDSVLSEIPMSVPSAEMSLNQDDEVVPWLNYPVDQSLQSEY-SDFLPEL-------- 143

Query: 419  DSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFA--SQGRMSKEA 592
                 S   +N+ STH N     F + +  S    ++  + T+   N A   QG  SK  
Sbjct: 144  -----SGVAVNETSTHSN-----FASFDRRSQ---SIRDSCTVSLNNGAVFEQGNPSK-- 188

Query: 593  MTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKG 772
              P   D  A P +G S +S       P     T SP  + +   +  NS    S     
Sbjct: 189  -VPTPADGEARPRSGTSQLST-----LPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAI 242

Query: 773  SGQ---VSATPSTMLPPKPQAID-VAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXX 940
             G    V A+   +   K Q  D VAP  +  + L+NFSHFSRPA  +KA+LQ       
Sbjct: 243  GGDSIGVQASDGGLPGIKMQKQDQVAPCNN--TVLMNFSHFSRPAALVKASLQNISAIAS 300

Query: 941  XXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRK 1120
                    K     +  + PA+ + I+S+  +      S C  + V       ++     
Sbjct: 301  IERIGSKEKGSAASI--SDPADTTFIDSS-IDLQKEKFSQCQPTIVLMKTDRKESKAKSL 357

Query: 1121 TSDATA----TCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGP---EAT 1279
                TA       E+ T    K   QVT +++  G              + DG    E  
Sbjct: 358  DEPVTAEPIDAICEENTPKNVKNPSQVTGESASKG--------------LPDGDKTVEPV 403

Query: 1280 VTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR--TTSK 1453
            +            R   +   + KRK R  E+SEC SED E ES+  KK VP R  + SK
Sbjct: 404  LAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSK 463

Query: 1454 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXX 1633
            RSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+  
Sbjct: 464  RSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 523

Query: 1634 XXXXXXXAPMVIPGSMQHFQVPQMAHLSHL-XXXXXXXXXXXXXXXXXXXXXXRPVMPLP 1810
                    PM++P  MQH     MAH S +                       RP++ +P
Sbjct: 524  MGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQVP 583

Query: 1811 SMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSG 1966
             +H     G+     G  ++ GM GSN  +   PG G+ +S      I +SG
Sbjct: 584  PIH-----GAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHTPLIPISG 630


>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  215 bits (547), Expect = 6e-53
 Identities = 211/652 (32%), Positives = 285/652 (43%), Gaps = 39/652 (5%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV----NKVGKRLKVWEN---------------EDAVLPGKPSPGGK 250
            END  EL+ E G ++    +   +R+    +               +D    G  +  GK
Sbjct: 33   ENDFVELVLENGQILMQGQSSKARRIPACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGK 92

Query: 251  DNTLDSVAPEI---ASSSGNSLHED-EVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLR 418
              T+DSV  EI     S+  SL++D EV  +L YP+D S + EY SDF   +        
Sbjct: 93   FGTIDSVLSEIPMSVPSAEMSLNQDDEVVPWLNYPVDQSLQSEY-SDFLPEL-------- 143

Query: 419  DSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFA--SQGRMSKEA 592
                 S   +N+ STH N     F + +  S    ++  + T+   N A   QG  SK  
Sbjct: 144  -----SGVAVNETSTHSN-----FASFDRRSQ---SIRDSCTVSLNNGAVFEQGNPSK-- 188

Query: 593  MTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKG 772
              P   D  A P +G S +S       P     T SP  + +   +  NS    S     
Sbjct: 189  -VPTPADGEARPRSGTSQLST-----LPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAI 242

Query: 773  SGQ---VSATPSTMLPPKPQAID-VAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXX 940
             G    V A+   +   K Q  D VAP  +  + L+NFSHFSRPA  +KA+LQ       
Sbjct: 243  GGDSIGVQASDGGLPGIKMQKQDQVAPCNN--TVLMNFSHFSRPAALVKASLQNISAIAS 300

Query: 941  XXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRK 1120
                    K     +  + PA+ + I+S+  +      S C  + V       ++     
Sbjct: 301  IERIGSKEKGSAASI--SDPADTTFIDSS-IDLQKEKFSQCQPTIVLMKTDRKESKAKSL 357

Query: 1121 TSDATA----TCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGP---EAT 1279
                TA       E+ T    K   QVT +++  G              + DG    E  
Sbjct: 358  DEPVTAEPIDAICEENTPKNVKNPSQVTGESASKG--------------LPDGDKTVEPV 403

Query: 1280 VTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR--TTSK 1453
            +            R   +   + KRK R  E+SEC SED E ES+  KK VP R  + SK
Sbjct: 404  LAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSK 463

Query: 1454 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXX 1633
            RSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+  
Sbjct: 464  RSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 523

Query: 1634 XXXXXXXAPMVIPGSMQHFQVPQMAHLSHL-XXXXXXXXXXXXXXXXXXXXXXRPVMPLP 1810
                    PM++P  MQH     MAH S +                       RP++ +P
Sbjct: 524  MGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQVP 583

Query: 1811 SMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSG 1966
             +H     G+     G  ++ GM GSN  +   PG G+ +S      I +SG
Sbjct: 584  PIH-----GAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHTPLIPISG 630


>ref|XP_001764602.1| predicted protein [Physcomitrella patens] gi|162684180|gb|EDQ70584.1|
            predicted protein [Physcomitrella patens]
          Length = 801

 Score =  215 bits (547), Expect = 6e-53
 Identities = 185/547 (33%), Positives = 243/547 (44%), Gaps = 46/547 (8%)
 Frame = +2

Query: 203  ENEDAVLPGKPSPGGKDNTLDSVAPEIASSS----GNSLHEDEVAQFLYYPLDDSFEREY 370
            E ED V P KP       + ++VA E A+         +  DE+  +L YPLDD+ ER Y
Sbjct: 166  ETEDGVTPCKPDTPKTGASPEAVANETATEPHPPHNIDVDSDEMVSWLQYPLDDTLERNY 225

Query: 371  CSDFF-EGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTI 547
            CSDFF E    N  +L++S    S  I+ R +            +G S + T     M +
Sbjct: 226  CSDFFGELPDANTQLLKESFAHGSTKISPRISFSGASGL-----DGGSNRGTTADAAMLL 280

Query: 548  GATNFASQGRMSKEAMTPKALDRAATPGTGRSVVSQNGSDFFPRIRTA----TQSPLSKW 715
            GA                         G       Q G + F ++RT       S L +W
Sbjct: 281  GA-------------------------GRAAGFFPQAGVEAFSKVRTIHSPQQHSSLPRW 315

Query: 716  QTGLHASNSKDIQSPCK-------KGSGQVSATPST-MLPPKPQAIDVAPLKSDKSKL-- 865
                H  NS +  S C        K S   SA+PS+ MLPP+       P  S+  +   
Sbjct: 316  PQP-HNPNSPNGSSECATSYLTSAKVSTSTSASPSSPMLPPRMLLGSPIPNSSNTPQASR 374

Query: 866  ---VNFSHFSRPAVNIKANLQXXXXXXXXXXXXXXXKLD------KLRVEGNSPAEPSII 1018
               +NFSHFSRPA  +KANL                K        +  +E  +  E SI 
Sbjct: 375  PGSMNFSHFSRPAAMVKANLHSLAGMNCTPPPCGRFKQQQGLPGCRPIIEACTSTESSIA 434

Query: 1019 ESNNTNW------------TAVASSSCANSKVQGTYQNNQNMLTRKTSDATATCSEDFTD 1162
            ES  T               AV      N+  +  + +   +   K  D    C     D
Sbjct: 435  ESTTTGQGPLVSHQEVKTQPAVLEREQINNVEESRWPSAPGLSPTKDRD----CVVSGGD 490

Query: 1163 STTKVSDQVTCQNSEFGRRSLASGATE---KCGEVGDGPEATVTXXXXXXXXXXXRTGKE 1333
              +   DQ TC+ S     ++ + + +    C +  D  E T+T              KE
Sbjct: 491  CKSLTPDQETCRLSGVTNGAVLASSEKGASHCTQHLDIQEPTITSSSGRYATSA-EPPKE 549

Query: 1334 AQNSCKRKGRYAEDSECQSEDVEFESMERK-KPVPPR--TTSKRSRAAEVHNLSERRRRD 1504
                 KRK    E+ ECQSED+E ES++ K KP      +T+KRSRAAEVHN SERRRRD
Sbjct: 550  PVTGTKRKSSEREEPECQSEDMEDESVDTKQKPATTGRVSTTKRSRAAEVHNQSERRRRD 609

Query: 1505 RINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXXXXXXAPMVIPGSMQ 1684
            RINEKMRALQELIP+ NK+DKASMLDEAIEYLK LQLQ+Q+          PMV+P  +Q
Sbjct: 610  RINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMSIRTGMTLPPMVMPPGLQ 669

Query: 1685 HFQVPQM 1705
            H Q+PQM
Sbjct: 670  HMQMPQM 676


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  214 bits (546), Expect = 8e-53
 Identities = 201/654 (30%), Positives = 281/654 (42%), Gaps = 36/654 (5%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVVNKVGK------------------RLKVWENEDAVLPGKPSPGGKD 253
            ENDL EL+WE G ++ K G+                  R    +N D  L      G  D
Sbjct: 33   ENDLVELVWENGQIL-KQGQSSRTKKSPTSNSLPSYCLRSHTPKNRDKDLGKTGKFGTVD 91

Query: 254  NTLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGA 433
              L+ +     S       +D++  +L Y +D+S +++YCSDF   +             
Sbjct: 92   AMLNGIQMSDPSGEMGLNQDDDMVPWLNYAVDESLQQDYCSDFLHEL------------- 138

Query: 434  SSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFASQ-GRMSKEAMTPKAL 610
            S  T N+    +++Q       + SS    +   N   G      + G +SK +      
Sbjct: 139  SGVTGNE----LSSQNNFASFDKRSSSNQFDREFNSVFGNHGARLEHGNVSKVSSVGGG- 193

Query: 611  DRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKGSGQVSA 790
              A  P +  + V  + S          Q+ L   ++G+  S S  I++    G  Q S 
Sbjct: 194  -EATRPRSSTNSVYTSSSQ-------QCQTSLPNLRSGVSDSTSNGIKNSTDNGIFQGSN 245

Query: 791  TPST------MLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXXX 952
              +T       L  + Q      L ++ S ++NFSHF+RP   ++ANLQ           
Sbjct: 246  PTATGNLSGLKLHKQDQR-----LSANNSGVMNFSHFARPVALVRANLQNIGSMPGARLS 300

Query: 953  XXXX--KLDKLRVEGNSPAEPSIIESNNTNWTAVASSSC----ANSKVQGTYQNNQNMLT 1114
                    DK  V   SP E  +I+S+         SSC      SKV    Q  ++   
Sbjct: 301  RIERMGSKDKSSVASRSPVESPLIDSSGC---LRKESSCQPAAVTSKVDVKPQEAKSSEQ 357

Query: 1115 RKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPEATVTXXX 1294
              +    A C ED  ++  K S            +  A  AT+   E     E  V    
Sbjct: 358  PVSEPPEAACREDALNNDKKPS------------QVHAESATKGVVESEKTVEPVVAASS 405

Query: 1295 XXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSE--DVEFESMERKKPVPPR--TTSKRSR 1462
                    R   +  ++ KRK    +DSEC SE  DVE ES+  KK VP R  T SKRSR
Sbjct: 406  VCSGNSVERASDDLPHNVKRKHCDLDDSECPSEEQDVEEESVGVKKQVPGRVGTGSKRSR 465

Query: 1463 AAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXX 1642
            AAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+     
Sbjct: 466  AAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGA 525

Query: 1643 XXXXAPMVIPGSMQHFQVPQMAHLSHL-XXXXXXXXXXXXXXXXXXXXXXRPVMPLPSMH 1819
                 PM+ P  MQH     MAH   +                        P++ +P+MH
Sbjct: 526  GFYMPPMMYPSGMQHMHAAHMAHFPPMGIGMGMGIGYGMGMPDINGGSSCYPMVQVPAMH 585

Query: 1820 VSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSGLAGAP 1981
             +  PG+++   G  ++ GM GSN  +   P  G  +S   + +  ++ L+G P
Sbjct: 586  GAHFPGTSV--SGPSALQGMAGSNFQLLGLPAQGHHMS---MPHAPLNPLSGGP 634


>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  211 bits (537), Expect = 9e-52
 Identities = 211/653 (32%), Positives = 285/653 (43%), Gaps = 40/653 (6%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV----NKVGKRLKVWEN---------------EDAVLPGKPSPGGK 250
            END  EL+ E G ++    +   +R+    +               +D    G  +  GK
Sbjct: 33   ENDFVELVLENGQILMQGQSSKARRIPACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGK 92

Query: 251  DNTLDSVAPEI---ASSSGNSLHED-EVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLR 418
              T+DSV  EI     S+  SL++D EV  +L YP+D S + EY SDF   +        
Sbjct: 93   FGTIDSVLSEIPMSVPSAEMSLNQDDEVVPWLNYPVDQSLQSEY-SDFLPEL-------- 143

Query: 419  DSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFA--SQGRMSKEA 592
                 S   +N+ STH N     F + +  S    ++  + T+   N A   QG  SK  
Sbjct: 144  -----SGVAVNETSTHSN-----FASFDRRSQ---SIRDSCTVSLNNGAVFEQGNPSK-- 188

Query: 593  MTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKG 772
              P   D  A P +G S +S       P     T SP  + +   +  NS    S     
Sbjct: 189  -VPTPADGEARPRSGTSQLST-----LPSQLCQTSSPFLRSRILENIGNSLGHTSTHHAI 242

Query: 773  SGQ---VSATPSTMLPPKPQAID-VAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXX 940
             G    V A+   +   K Q  D VAP  +  + L+NFSHFSRPA  +KA+LQ       
Sbjct: 243  GGDSIGVQASDGGLPGIKMQKQDQVAPCNN--TVLMNFSHFSRPAALVKASLQNISAIAS 300

Query: 941  XXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRK 1120
                    K     +  + PA+ + I+S+  +      S C  + V       ++     
Sbjct: 301  IERIGSKEKGSAASI--SDPADTTFIDSS-IDLQKEKFSQCQPTIVLMKTDRKESKAKSL 357

Query: 1121 TSDATA----TCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGP---EAT 1279
                TA       E+ T    K   QVT +++  G              + DG    E  
Sbjct: 358  DEPVTAEPIDAICEENTPKNVKNPSQVTGESASKG--------------LPDGDKTVEPV 403

Query: 1280 VTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR--TTSK 1453
            +            R   +   + KRK R  E+SEC SED E ES+  KK VP R  + SK
Sbjct: 404  LAASSVCSGNSVERASDDPVYNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSK 463

Query: 1454 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKS-DKASMLDEAIEYLKTLQLQVQLX 1630
            RSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK  DKASMLDEAIEYLKTLQLQVQ+ 
Sbjct: 464  RSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKKVDKASMLDEAIEYLKTLQLQVQIM 523

Query: 1631 XXXXXXXXAPMVIPGSMQHFQVPQMAHLSHL-XXXXXXXXXXXXXXXXXXXXXXRPVMPL 1807
                     PM++P  MQH     MAH S +                       RP++ +
Sbjct: 524  SMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQV 583

Query: 1808 PSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSG 1966
            P +H     G+     G  ++ GM GSN  +   PG G+ +S      I +SG
Sbjct: 584  PPIH-----GAPFSGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHTPLIPISG 631


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  210 bits (534), Expect = 2e-51
 Identities = 208/672 (30%), Positives = 282/672 (41%), Gaps = 55/672 (8%)
 Frame = +2

Query: 131  NDLEELLWEKGPVV-----NKVGKRLKVWENEDAVLP-------------GKPSPGGKDN 256
            ND+ EL+WE G +      ++V K           LP             G  +  GK  
Sbjct: 24   NDVFELVWENGQITTQGQSSRVRKEPTCNSLPSHCLPSYTPKSRDKDLGNGTTTKTGKFG 83

Query: 257  TLDSVAPEI---ASSSGNSL-HEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDS 424
            T+DSV  EI     S G  L H+D++  +L YP+D S + EYC DF   +          
Sbjct: 84   TVDSVLNEIPMSVPSDGVGLSHDDDMMPWLNYPMDGSLQHEYCRDFLPEL---------- 133

Query: 425  MGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNM-TIGATNFASQGRMSKEAMTP 601
               S  T+N+ S   N     F T + SS       +N  ++       Q   S +  + 
Sbjct: 134  ---SGVTVNEISKSNNN----FATNDKSSCNQLYRESNANSVDYCASLEQRNNSSKVGSV 186

Query: 602  KALDRAATPGTGRSVV-----SQNGSDFFPRIRTATQSPLSKWQTGL-HASNSKDIQSPC 763
             A D +  P TG S +     SQ     FP  R+     +    T   H +   D     
Sbjct: 187  VASDVSTRPRTGTSQLYSSSSSQQCQASFPSFRSRVLDTVGDNTTSAAHHAVCND----- 241

Query: 764  KKGSGQVSAT---PSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXX 934
               SG+VS+    PS  +  +  +I      S+   ++NFSHF+RPA   KA+LQ     
Sbjct: 242  ---SGRVSSVGGFPSLKMHNRQDSIP----PSNSFNVLNFSHFTRPAALAKASLQNIGTM 294

Query: 935  XXXXXXXXXXKLDKLRVEGNSPAEPSIIESNN------TNWTAVASSSCANSKVQGTYQN 1096
                      K       GN+P +  +I++ +      +    V +SS  N K       
Sbjct: 295  PGSNMPN---KEKGCAANGNNPPKSGLIDTGSGLRKETSAHCQVVASSGVNLKPSEARSL 351

Query: 1097 NQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPEA 1276
             +    +   D+ A C ED   S   +++   C+++    R+L  G  EK        E 
Sbjct: 352  EEPCAAK---DSEAVCREDA--SKNDINNSFPCESTN---RALPDG--EK------NIEP 395

Query: 1277 TVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPRTT-SK 1453
             V            R   +  +  KRK R  EDSEC SEDVE ES+  KK  PPR + SK
Sbjct: 396  VVASSSVCSGNSVERASDDPTHVLKRKFRDTEDSECHSEDVEEESVGVKKTAPPRASGSK 455

Query: 1454 RSRAAEVHNLSER-------------RRRDRINEKMRALQELIPHCNKSDKASMLDEAIE 1594
            RSRAAEVHNLSER             RRRDRINEKMRALQELIP+CNK DKASMLDEAIE
Sbjct: 456  RSRAAEVHNLSERILNGFFIFHLSEQRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 515

Query: 1595 YLKTLQLQVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXX 1774
            YLKTLQLQVQ+          PM++P  MQ    P M H   +                 
Sbjct: 516  YLKTLQLQVQIMSMGAGLCMPPMMLPTGMQPMHAPHMTHFLPMGVGMGMGLGMGFGMGMP 575

Query: 1775 XXXXXR---PVMPLPSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPI 1945
                     P+   P M  +  PG  +    A +  GM G N  +   PG G+ +   P+
Sbjct: 576  DMNGGSSGYPMFQFPPMQGAHFPGPPMPGHTA-AFHGMTGPNLQVFGLPGQGLSM---PM 631

Query: 1946 SNIAMSGLAGAP 1981
                +  + G P
Sbjct: 632  QRAPLVPVLGGP 643


>ref|XP_001764406.1| predicted protein [Physcomitrella patens] gi|162684270|gb|EDQ70673.1|
            predicted protein [Physcomitrella patens]
          Length = 1015

 Score =  209 bits (532), Expect = 4e-51
 Identities = 189/558 (33%), Positives = 260/558 (46%), Gaps = 53/558 (9%)
 Frame = +2

Query: 203  ENEDAVLPGKPSPGGKDNTLDSVAPEIASSSGNSLHE-----DEVAQFLYYPLDDSFERE 367
            E E  V P KP      N L++     ++++ N +H      DE+  +L YPLDD F   
Sbjct: 309  EAEAGVTPSKPDTPKGGNLLET-GGNGSNTAPNPVHNIDVDNDEMVSWLQYPLDDPF--- 364

Query: 368  YCSDFF-EGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMT 544
             CSDFF E  + N  +LR+S            TH +T+                     T
Sbjct: 365  -CSDFFGEIQEANTQLLRESF-----------THGSTK---------------------T 391

Query: 545  IGATNF--ASQGRMSKEAMTPKALDRAATPGTGR--SVVSQNGSDFFPRIRTA----TQS 700
            +  TNF  AS         TP   D A   G GR   ++ Q G + F ++R+       S
Sbjct: 392  LPRTNFPGASGNDAGINRETPS--DSAMLLGVGRVSGLLPQGGVEAFNKVRSLHSLQQHS 449

Query: 701  PLSKWQTGLHASNSKDIQSPCK------KGSGQVSATPST-MLPPKPQAIDVAPLKSDKS 859
             L +W   L  ++S              K S    A+PS  MLPPK Q   VAP+ + ++
Sbjct: 450  SLPRWPQPLTPNSSSGSSLLATNNLTFTKASAPTLASPSHHMLPPKTQR--VAPVLNSQN 507

Query: 860  K-------LVNFSHFSRPAVNIKANLQXXXXXXXXXXXXXXXKLDKLRVEGNSPAEPSII 1018
                     +NFSHFSRPA  +KANL                   +++ + NSP    I+
Sbjct: 508  TPQPSSPGSMNFSHFSRPAAMVKANLHSLVGINCGPPPST-----RVKQQHNSPVVRPIM 562

Query: 1019 ESNNTNWTAVASSSCANSKVQGTYQN----------NQNMLTRKTSDATATCSEDFTDST 1168
            E+  +  +++A S+ A     G+YQ            QN    ++   +A C     DS 
Sbjct: 563  EACTSTGSSIAESTTAGQGPSGSYQEVKTQPAVLEREQNNGIEESRWPSAPCPSPTKDSD 622

Query: 1169 TKVS---------DQVTCQNSEFGRRSLASGATEKCGEVGDGP---EATVTXXXXXXXXX 1312
              VS         DQ TC+ S     ++ + + +        P   E T+T         
Sbjct: 623  CVVSEGNFRSTPPDQETCRLSGVTNGAVLASSDKGASHGTQHPDVQEPTITSSSGGYGTS 682

Query: 1313 XXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERK-KPVPPR--TTSKRSRAAEVHNL 1483
                 K  + S KRK    E++ECQSED E ES++ K KP+     +T+KRSRAAEVHN 
Sbjct: 683  IEPLQK-VRTSNKRKCSEREETECQSEDGEDESVDTKHKPITTGRGSTTKRSRAAEVHNQ 741

Query: 1484 SERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXXXXXXAPM 1663
            SERRRRDRINEKMRALQELIP+ NK+DKASMLDEAI+YLK LQLQ+Q+          PM
Sbjct: 742  SERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMMSIRTGMTLPPM 801

Query: 1664 VIPGSMQHFQVPQMAHLS 1717
            V+P  +QH Q+PQM  ++
Sbjct: 802  VMPPGLQHMQMPQMPQVA 819


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  203 bits (516), Expect = 3e-49
 Identities = 186/637 (29%), Positives = 260/637 (40%), Gaps = 32/637 (5%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVVNKVGKRLKVWEN------EDAVLPGKPSPGGKDNTLDSVAPEIAS 289
            END  EL+WE G +     ++++   +      +  +  G  +  GK  T++S   E+ +
Sbjct: 34   ENDFGELIWENGQIQYSRARKIQTCNSLPPKIRDKDIGNGTNTKTGKFGTMESTLNELLA 93

Query: 290  SSGNSLH---EDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGASSATINDRS 460
                 +    +D++  +L YPLD+  + +YCSDF   +             S  T+N+ S
Sbjct: 94   VPAVEVRANQDDDMVPWLNYPLDEPLQHDYCSDFLPEL-------------SGVTVNEHS 140

Query: 461  THIN-------------TQKELFMTGEGSSPQWTNLSTNMTIGATNFASQGRMSKEAMTP 601
            +  N             T         G + +  ++  N + G  + A + R S   + P
Sbjct: 141  SQSNFPSFDKRSCNQSITDSHTVSVHNGLNLEQGDVVMNSSAGDID-AKRPRTSASQLYP 199

Query: 602  KALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKGSGQ 781
             + ++  T            S  F R R +T+   S      H      I++P   G G 
Sbjct: 200  SSSEQCKT------------SFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAPTS-GGGF 246

Query: 782  VSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXXXXXX 961
             S      +P  P  I+        S L+NFSHF+RPA  +KANLQ              
Sbjct: 247  PSIKMQKQVPA-PSPIN--------SSLINFSHFARPAALVKANLQNVGMRASSGTSSME 297

Query: 962  XKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRKTSDATAT 1141
               +K +     P E                S C  + +    +     +        A 
Sbjct: 298  RMQNKDKGSIGLPKE--------------TDSHCRPNMMSSKVEVKPTEVKPAEGSVPAE 343

Query: 1142 CSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPEATVTXXXXXXXXXXXR 1321
              E+ +      SD+   QN  FG       A +   +V    E  V            R
Sbjct: 344  LPEEMSQEGDSKSDRNCHQN--FGE-----SAIKGLEDVEKTTEPLVASSSVGSGNSAER 396

Query: 1322 TGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPRTT--SKRSRAAEVHNLSERR 1495
               +   + KRK R  E+SE  SED E ES+  KKP   R    SKR RAAEVHNLSERR
Sbjct: 397  PSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 456

Query: 1496 RRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXXXXXXAPMVIPG 1675
            RRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+           M++P 
Sbjct: 457  RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPP 516

Query: 1676 SMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXXXXXXXRPVMPLPSMHVSALPG------ 1837
             M H     M     +                       P+  +P MH +  PG      
Sbjct: 517  GMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGC-PMYQVPPMHGAHFPGSQMSGP 575

Query: 1838 SALHCQG--AMSMSGMPGSNAPMTRCPGPGMQLSGHP 1942
            SALH  G  ++ M G+ G   PM+    P M +SG P
Sbjct: 576  SALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGP 612


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
            gi|223548548|gb|EEF50039.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 758

 Score =  202 bits (514), Expect = 4e-49
 Identities = 193/658 (29%), Positives = 273/658 (41%), Gaps = 22/658 (3%)
 Frame = +2

Query: 38   LENGTFSSSDTVSITKGYWDILQPKRSMPLENDLEELLWEKGPVVNKVGKRL-------- 193
            L  G F SS     T    D+     S   END  EL+WE G + +   +++        
Sbjct: 10   LSKGKFDSSSQEKNTTCSTDL-----SAGPENDFLELVWENGQIQSSRARKISNGVQSQT 64

Query: 194  -KVWENEDAVLPGKPSP------GGKDNTLDSVAPEIASSSGNSLHEDEVAQFLYYPLDD 352
             K  + + ++  G  +       G  D  LD V   + S       ED++  +L  P+DD
Sbjct: 65   SKFRDKDISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQEDDMVPWLNDPIDD 124

Query: 353  SFEREYCSDFFEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLS 532
            S +++YC +F   +             S  T+N+ + +     +    G  S       S
Sbjct: 125  SLQQDYCHEFLAEL-------------SGVTVNEHAQNSFASSDKKCNGNQSVRDSHTAS 171

Query: 533  TNMTIGATNFASQGRMSKEAMTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSK 712
             +  +       QG M + +      D  AT    R+  SQ  S    +     Q+    
Sbjct: 172  VHNGLSL----EQGHMPRVS---SGRDGDAT--RSRTTASQLYSSSVQQC----QASFPH 218

Query: 713  WQTGLHASNSKDIQSPCKKGSG--QVSATPSTMLPPKPQAIDVAP-LKSDKSKLVNFSHF 883
            +++ + A+N++   +     S    +  +PS    P  +A    P L +  S L+NFSHF
Sbjct: 219  FRSRISANNAESTNNSTHVASSGDPIRGSPSGGGFPSIKAQKQVPVLATTNSSLMNFSHF 278

Query: 884  SRPAVNIKANLQXXXXXXXXXXXXXXX--KLDKLRVEGNSPAEPSIIESNNTNWTAVASS 1057
            SRP    KAN +                   DK  +  +S    S++    +      SS
Sbjct: 279  SRPVALAKANFENIGTRAGSGISSIERIGSQDKGSIASSSNPAESMLNETFSGLKKETSS 338

Query: 1058 SCANSKVQGTYQNNQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGA 1237
             C    V     +    L  + ++      +         +D+  CQ +    + LA G 
Sbjct: 339  RCRPVMVSSKVDDKP--LDHRPAEEPLLAKQPEAMENDCKNDKNHCQFAASATKGLADG- 395

Query: 1238 TEKCGEVGDGPEATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESME 1417
             EK  E        V            R   E   + KRK R  E+SE  SEDVE ES+ 
Sbjct: 396  -EKTAE------PIVASSSVCSGNSMERVSDEPMQNLKRKHRETEESEGPSEDVEEESVG 448

Query: 1418 RKKPVPPR--TTSKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAI 1591
             KK  P R  T SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAI
Sbjct: 449  GKKAAPARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 508

Query: 1592 EYLKTLQLQVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXX 1771
            EYLKTLQLQVQ+           M++P  + H  V   AH+S                  
Sbjct: 509  EYLKTLQLQVQIMSMGAGLYMPSMMLPPGVPHMHV---AHMSQFSPMGVGMGFGMGMPDM 565

Query: 1772 XXXXXXRPVMPLPSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPI 1945
                    ++ +P MH +  P   +   G  ++ GM GSN PM      G+   GHP+
Sbjct: 566  IGGSSGCSMIQVPPMHGAHFPSPPM--SGPSALHGMGGSNLPMF-----GLSSQGHPM 616


>ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [Solanum lycopersicum]
          Length = 723

 Score =  201 bits (511), Expect = 1e-48
 Identities = 195/659 (29%), Positives = 284/659 (43%), Gaps = 41/659 (6%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV----NKVGKRLKVWENEDAVLPG---------KPSPGGK----DN 256
            ENDL EL W+ G +V    N   K+  V  N  +   G           S  GK    D+
Sbjct: 32   ENDLVELKWQNGQIVMQGQNSSAKKSTVPNNLPSSASGDRDKYTGNSSTSKIGKFGLMDS 91

Query: 257  TLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGAS 436
             L+ ++  + +   + + EDE   +L YP DDS +++YC+     +             S
Sbjct: 92   MLNDMSLTVPTGELDLIQEDEGVPWLGYPADDSLQQDYCAQLLPEI-------------S 138

Query: 437  SATINDRSTHINTQKELF--MTGEGSSPQWTNLSTNMTI-GATNFASQGRMSKEAMTPKA 607
              T N++S      + +F  +   GSS +    S ++ +  A NF    R +   ++P +
Sbjct: 139  GVTANEQSG-----QSVFGLINKRGSSDKMIGDSHSVPVHNAVNFE---RRNTSKVSPSS 190

Query: 608  LDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKGSGQVS 787
                 +     S+ SQ G    P + +      S          SK+  +P     G+ +
Sbjct: 191  RFSPLS-----SLPSQKGHASIPTLESGVSDVFS----------SKNSNTPLSV-LGESN 234

Query: 788  ATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKA-NLQXXXXXXXXXXXXXXX 964
             + ++    K   I    +  ++S L+NFSHFSRPA  +KA  LQ               
Sbjct: 235  QSKASAGDAKSNRIQKQNMPGNRSNLLNFSHFSRPATLVKAAKLQSSTGGSNISGSPI-- 292

Query: 965  KLDKLRVEGNSPAEPSIIESNNTNWTAVAS-----------------SSCANSKVQGTYQ 1093
                L  +G    E   I  N+ +  A  +                 SS   S+  G   
Sbjct: 293  ----LEAKGKKGEEKVTIGDNHVSAAATENFLTSKKDNFPHYPTNGVSSQLESRPSGASF 348

Query: 1094 NNQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPE 1273
            ++++    ++ +A   CS +  ++    +     ++   G R++  G    C  V  G  
Sbjct: 349  HDRSCQAEQSDNAFRDCSSNNDNTHDHFTSAKATKDIADGERNVEHGVA--CSSVCSGSS 406

Query: 1274 ATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR--TT 1447
            A              R   +   + KRK R  E+ EC+SEDVE ES+  KKP   R  T 
Sbjct: 407  AE-------------RGSSDQPLNLKRKTRDNEEFECRSEDVEEESVGIKKPCAARGGTG 453

Query: 1448 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQL 1627
            SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK+DKASMLDEAIEYLKTLQLQVQ+
Sbjct: 454  SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQI 513

Query: 1628 XXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHL-XXXXXXXXXXXXXXXXXXXXXXRPVMP 1804
                      PM+ P  MQH    QM H S +                        P+ P
Sbjct: 514  MSVGAGLCVPPMMFP--MQHMHGAQMPHFSPMSLGMGMGMGFGLGMLEMNGRSSGYPMYP 571

Query: 1805 LPSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSGLAGAP 1981
            +PS+     P   +    + +  G+  SN  +   PG G+ +S   I   ++  LAG P
Sbjct: 572  MPSVQGGHFPSPPI--PASTAYPGIAVSNRHVFAHPGQGLPMS---IPRASLGPLAGQP 625


>ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like isoform X2 [Cicer
            arietinum]
          Length = 723

 Score =  200 bits (508), Expect = 2e-48
 Identities = 195/672 (29%), Positives = 278/672 (41%), Gaps = 51/672 (7%)
 Frame = +2

Query: 104  QPKRSMPLENDLEELLWEKGPVVNKVGKRLKVWENEDA------VLPGKPSPGGKDNT-- 259
            QP  S   END  EL+WE G + ++ G+  +V ++          LP   SP G+D    
Sbjct: 26   QPSES---ENDFFELVWESGQISSQ-GQSSRVRKSPSCRSFPSHCLPSH-SPRGRDKDIG 80

Query: 260  -------------------LDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDF 382
                               L+ +   + S   +   ++++  +L Y +D SF+ EY S+F
Sbjct: 81   VGGYGNNPRTGKFGDLETGLNEIPMSVPSHVVDVGQDEDMMPWLDYSMDGSFQNEYGSNF 140

Query: 383  FEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNF 562
               + P++        +++ T+ D+ ++ N   ++F     +S +  N+S   +      
Sbjct: 141  LHEL-PSVAGNNLPAASNNFTLLDKRSNGN---QIFRKSHKNSAEPMNVSRGSSAEPVET 196

Query: 563  ASQGRMSKEAMTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNS 742
            A   + S   + P        P T    V    SD                      +N+
Sbjct: 197  ARLNKASTSQLYP--------PSTSFLTVRSRASDVAEN------------------NNA 230

Query: 743  KDIQSPCKKGSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQX 922
             +       G      + S+  P          +  + S L+NFSHF+RPA  ++ANLQ 
Sbjct: 231  SNANQDVPYGEITRITSSSSDFPSLKVQKQDPKMPGNSSSLMNFSHFARPAAIVRANLQN 290

Query: 923  XXXXXXXXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQN-- 1096
                          + D + V+    A  S   SN  + T V SS   + + +   Q   
Sbjct: 291  ISLKSGLVSASA--RSDSIAVKNKGAASTS---SNPPDSTLVNSSGDCSKEPETRCQKVA 345

Query: 1097 -----NQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVG 1261
                 +   L  K+ +     S+  ++   K S     +N +   + L  G  +    V 
Sbjct: 346  EQPKVDLKPLQPKSLELKVVASKQ-SEPACKESG---VKNDQPSNQVLGDGVAKGQTTVE 401

Query: 1262 DGPEATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR 1441
             G E  V            R   +   + KRK R  EDSEC SEDVE ES+  KK    R
Sbjct: 402  KGVEVAVASSSVCSGNGADRGSDDPNQNLKRKSRDTEDSECHSEDVEDESVVVKKGASGR 461

Query: 1442 TT--SKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQL 1615
                SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQL
Sbjct: 462  GVIGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 521

Query: 1616 QVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXXXXXXXR- 1792
            QVQ+          PM++P  MQH   P MA  S L                        
Sbjct: 522  QVQMMSMGAGLYMPPMMLPAGMQHMHAPHMAAFSPLGVGMHMGLGMGYGMGIPDMNGGSS 581

Query: 1793 --PVMPLPSMHVSALPGSALHCQGAMSMSGMPGSN------------APMTRCPGPGMQL 1930
              P++ +P M  + +P    H  G  ++ GM  SN             PM R   P    
Sbjct: 582  RFPMIQVPQMQGAHIP--VAHMSGPSAIHGMARSNPQGFGLQGQGISMPMPR--APVFPF 637

Query: 1931 SGHPISNIAMSG 1966
            SG PI N + +G
Sbjct: 638  SGGPIMNSSATG 649


>ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like isoform X1 [Cicer
            arietinum]
          Length = 733

 Score =  200 bits (508), Expect = 2e-48
 Identities = 195/672 (29%), Positives = 278/672 (41%), Gaps = 51/672 (7%)
 Frame = +2

Query: 104  QPKRSMPLENDLEELLWEKGPVVNKVGKRLKVWENEDA------VLPGKPSPGGKDNT-- 259
            QP  S   END  EL+WE G + ++ G+  +V ++          LP   SP G+D    
Sbjct: 26   QPSES---ENDFFELVWESGQISSQ-GQSSRVRKSPSCRSFPSHCLPSH-SPRGRDKDIG 80

Query: 260  -------------------LDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDF 382
                               L+ +   + S   +   ++++  +L Y +D SF+ EY S+F
Sbjct: 81   VGGYGNNPRTGKFGDLETGLNEIPMSVPSHVVDVGQDEDMMPWLDYSMDGSFQNEYGSNF 140

Query: 383  FEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNF 562
               + P++        +++ T+ D+ ++ N   ++F     +S +  N+S   +      
Sbjct: 141  LHEL-PSVAGNNLPAASNNFTLLDKRSNGN---QIFRKSHKNSAEPMNVSRGSSAEPVET 196

Query: 563  ASQGRMSKEAMTPKALDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNS 742
            A   + S   + P        P T    V    SD                      +N+
Sbjct: 197  ARLNKASTSQLYP--------PSTSFLTVRSRASDVAEN------------------NNA 230

Query: 743  KDIQSPCKKGSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKANLQX 922
             +       G      + S+  P          +  + S L+NFSHF+RPA  ++ANLQ 
Sbjct: 231  SNANQDVPYGEITRITSSSSDFPSLKVQKQDPKMPGNSSSLMNFSHFARPAAIVRANLQN 290

Query: 923  XXXXXXXXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQN-- 1096
                          + D + V+    A  S   SN  + T V SS   + + +   Q   
Sbjct: 291  ISLKSGLVSASA--RSDSIAVKNKGAASTS---SNPPDSTLVNSSGDCSKEPETRCQKVA 345

Query: 1097 -----NQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVG 1261
                 +   L  K+ +     S+  ++   K S     +N +   + L  G  +    V 
Sbjct: 346  EQPKVDLKPLQPKSLELKVVASKQ-SEPACKESG---VKNDQPSNQVLGDGVAKGQTTVE 401

Query: 1262 DGPEATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR 1441
             G E  V            R   +   + KRK R  EDSEC SEDVE ES+  KK    R
Sbjct: 402  KGVEVAVASSSVCSGNGADRGSDDPNQNLKRKSRDTEDSECHSEDVEDESVVVKKGASGR 461

Query: 1442 TT--SKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQL 1615
                SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQL
Sbjct: 462  GVIGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 521

Query: 1616 QVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXXXXXXXXXXXR- 1792
            QVQ+          PM++P  MQH   P MA  S L                        
Sbjct: 522  QVQMMSMGAGLYMPPMMLPAGMQHMHAPHMAAFSPLGVGMHMGLGMGYGMGIPDMNGGSS 581

Query: 1793 --PVMPLPSMHVSALPGSALHCQGAMSMSGMPGSN------------APMTRCPGPGMQL 1930
              P++ +P M  + +P    H  G  ++ GM  SN             PM R   P    
Sbjct: 582  RFPMIQVPQMQGAHIP--VAHMSGPSAIHGMARSNPQGFGLQGQGISMPMPR--APVFPF 637

Query: 1931 SGHPISNIAMSG 1966
            SG PI N + +G
Sbjct: 638  SGGPIMNSSATG 649


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  200 bits (508), Expect = 2e-48
 Identities = 204/633 (32%), Positives = 276/633 (43%), Gaps = 33/633 (5%)
 Frame = +2

Query: 131  NDLEELLWEKGPVV-----NKVGKR-------LKVWENEDAVLPGKPSPG--GKDNTLDS 268
            +DL EL+WE G ++     N+  K             N D  L G  S G  GK  +++S
Sbjct: 22   SDLVELVWENGQIMMQSQSNRARKSPTFNSLPSHTPRNRDRDL-GNGSNGKMGKFGSVNS 80

Query: 269  VAPEIASS--SGNS--LHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGAS 436
            V  EI  S  SG      +D++  +L Y LD   + EY  DF   +             S
Sbjct: 81   VIDEIPLSVPSGEMGLSDDDDMLPWLNYALDQPLQHEYSHDFMPEI-------------S 127

Query: 437  SATINDRSTHINTQKELFMTGEGSSPQWTNLSTNMTIGATNFASQGRMSKEAMTPKALDR 616
              T N+ ST+ N           SS  +   +TN T G      Q  +SK +    A   
Sbjct: 128  DVTANEISTNGNLTP--IDKRSSSSQMYRESNTNSTPG----LEQRNVSKLSSVSAA--E 179

Query: 617  AATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKGSGQVSATP 796
            A+ P T  + + Q  S   P+    +   ++    G + S++    + CK     + A+P
Sbjct: 180  ASRPRTSTTHLYQMSSQ-QPQASIPSLRSIASDMVGGNTSSAAH-HAVCK---NSIQASP 234

Query: 797  STMLPPKPQAIDVAPLKS-DKSKLVNFSHFSRPAVNIKANLQXXXXXXXXXXXXXXXKLD 973
            +   P  P      P  S + S +VNFSHFSR ++                         
Sbjct: 235  AGGFPGIPMQKQNPPTSSNNNSTIVNFSHFSRSSL------------------------- 269

Query: 974  KLRVEG-NSPAEPSIIESNNTNWTAVASSSCANSKVQGTYQNNQNMLTRKTSDATATCSE 1150
             LRVE   +  + S   S+N   + +  SSC   K + T Q  Q+++   + D   T S+
Sbjct: 270  -LRVEKIKNKDKVSAATSSNPPESILIESSCGLMK-ESTSQ-CQDVMAPSSVDMKPTASK 326

Query: 1151 DFTD-STTKVSDQVTCQ---NSEFGRRSLASGATEKCGEVGDGPEAT--VTXXXXXXXXX 1312
               +  TTK S+    Q   +    R S           + D  + T  V          
Sbjct: 327  PLEEPHTTKQSEAAAYQEDPSKNDDRNSNHIPCESAIRPLPDVEKTTEPVVDSSVCSVNS 386

Query: 1313 XXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVP--PRTTSKRSRAAEVHNLS 1486
              +   +     KRK R  +DSEC SEDVE ES+  KK V     T SKRSRAAEVHNLS
Sbjct: 387  VEKASDDPTRVLKRKSRDTDDSECHSEDVEEESVGVKKKVAHGRGTGSKRSRAAEVHNLS 446

Query: 1487 ERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQLXXXXXXXXXAPMV 1666
            ERRRRDRINEKMRALQELIP+CNK DKASMLDEAIEYLKTLQLQVQ+           M+
Sbjct: 447  ERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPQMM 506

Query: 1667 IPGSMQHFQVPQMAHLSHL-----XXXXXXXXXXXXXXXXXXXXXXRPVMPLPSMHVSAL 1831
            +P  MQH   P MAH SH+                            P++ +P M  +  
Sbjct: 507  LPPGMQHMHAPHMAHFSHMGMGMGMGMGLGMGFGMGLPDMNGGSSGYPMLQVPPMQGAHF 566

Query: 1832 PGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQL 1930
            PGS +   G  + +GM GSN  M   PG G+ +
Sbjct: 567  PGSPM--SGHTAFNGMIGSNLQMFGLPGQGVSM 597


>ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [Solanum tuberosum]
          Length = 716

 Score =  199 bits (506), Expect = 4e-48
 Identities = 193/663 (29%), Positives = 280/663 (42%), Gaps = 45/663 (6%)
 Frame = +2

Query: 128  ENDLEELLWEKGPVV----NKVGKRLKVWENEDAVLPG---------KPSPGGK----DN 256
            ENDL EL W+ G +V    +   K+  V  N  +   G           S  GK    D 
Sbjct: 32   ENDLIELKWQNGQIVMQGQSSSAKKSTVHNNFQSSASGDRDKYTGNSSTSKIGKFGLMDT 91

Query: 257  TLDSVAPEIASSSGNSLHEDEVAQFLYYPLDDSFEREYCSDFFEGMQPNMYMLRDSMGAS 436
             L+ ++  + +   + + EDE   +L YP DDS +++YC+     +             S
Sbjct: 92   MLNDMSLSVPTDELDLIQEDEGVPWLGYPADDSLQQDYCAQLLPEI-------------S 138

Query: 437  SATINDRSTHINTQKELF--MTGEGSSPQWTNLSTNMTI-GATNFASQGRMSKEAMTPKA 607
              T N++S     ++ +F  +   GSS +    S ++ +  A NF  Q   SK + + + 
Sbjct: 139  GVTANEQS-----RQSVFGLINKRGSSDKMIGDSHSVPVHNAVNF-EQRNTSKVSPSSRF 192

Query: 608  LDRAATPGTGRSVVSQNGSDFFPRIRTATQSPLSKWQTGLHASNSKDIQSPCKKGSGQVS 787
               ++ P       SQ G    P + +      S   +    S   D  +  K  +G V 
Sbjct: 193  SPLSSLP-------SQKGHASIPTLESGVSDIFSSKNSNTPMSVLGD-SNQSKASAGDV- 243

Query: 788  ATPSTMLPPKPQAIDVAPLKSDKSKLVNFSHFSRPAVNIKA-NLQXXXXXXXXXXXXXXX 964
                     K   I    +  ++S L+NFSHFSRPA  +KA  LQ               
Sbjct: 244  ---------KSNKIQKQNMPGNRSNLLNFSHFSRPATFVKAAKLQSSTGGSNVSDSPI-- 292

Query: 965  KLDKLRVEGNSPAEPSIIESNNTNWTAVAS-----------------SSCANSKVQGTYQ 1093
                L  +G    E   I  N+ +  A  +                  S   S+  G   
Sbjct: 293  ----LEAKGKKGGEKVAIGDNHVSAAATENYLTSKKDNVPHYPTNGVPSQLESRPSGASF 348

Query: 1094 NNQNMLTRKTSDATATCSEDFTDSTTKVSDQVTCQNSEFGRRSLASGATEKCGEVGDGPE 1273
            ++++    ++ +A   CS +  ++  + +     ++   G R++  G    C  V  G  
Sbjct: 349  HDRSCQVEQSDNAFRDCSSNNDNTRDQFTGAKATKDIADGERNVEHGVA--CSSVCSGSS 406

Query: 1274 ATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEFESMERKKPVPPR--TT 1447
            A              R   +   + KRK R  E+SEC+SEDVE ES+  KK    R  T 
Sbjct: 407  AE-------------RGSSDQPLNLKRKTRDNEESECRSEDVEEESVGIKKTCAARGGTG 453

Query: 1448 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQL 1627
            SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK+DKASMLDEAIEYLKTLQLQVQ+
Sbjct: 454  SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQI 513

Query: 1628 XXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHL-----XXXXXXXXXXXXXXXXXXXXXXR 1792
                      PM+ P  +QH    QM H + +                            
Sbjct: 514  MSMGTGFCVPPMMFPTGVQHMHGAQMPHFAPMSLGMGMGMGMGMGFGMGMLEMNGRSSGY 573

Query: 1793 PVMPLPSMHVSALPGSALHCQGAMSMSGMPGSNAPMTRCPGPGMQLSGHPISNIAMSGLA 1972
            P+ P+PS+     P   +    + +  G+  SN      PG G+ +S   I   ++  LA
Sbjct: 574  PMYPMPSVQGGHFPSPPI--PASTAYPGIAVSNRHAYAHPGQGLPMS---IPRASLGPLA 628

Query: 1973 GAP 1981
            G P
Sbjct: 629  GQP 631


>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
            gi|449522990|ref|XP_004168508.1| PREDICTED: transcription
            factor PIF3-like [Cucumis sativus]
          Length = 696

 Score =  198 bits (504), Expect = 6e-48
 Identities = 195/681 (28%), Positives = 281/681 (41%), Gaps = 41/681 (6%)
 Frame = +2

Query: 62   SDTVSITKGYWDILQPKRSMPLENDLEELLWEKGPVV-----NKVGKRLKVWENEDAVLP 226
            S+   + +G  D  Q K SM   ND+ EL+WE G ++     N+  K   +  ++   LP
Sbjct: 4    SELYRVARGKLDSTQDKNSM---NDVFELVWENGQILLQGQSNRPRKNSNLNTSQAQCLP 60

Query: 227  GKP-------------SPGGKDNTLDSVAPEIASSSGNSLHE------DEVAQFLYYPLD 349
                            +  GK   +DSV  ++ S++ +   E      D++  +L YPLD
Sbjct: 61   SHSPRDRDRDVGYFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHDDDDDMVPWLSYPLD 120

Query: 350  DSFEREYCSDFFEGMQPNMYMLRDSMGASSATINDRSTHINTQKELFMTGEGSSPQWTNL 529
               + +Y SDF   +             S  T+ND  +  +    +   G+ S     N 
Sbjct: 121  GHLQHDYSSDFLPEL-------------SGVTVNDFPSRNSIASSI---GKASGGNQVNR 164

Query: 530  STNMTIGATNFAS--QGRMSKEAMTPKALDRA-ATPGTGRSVVSQNGSDFFPRIRTATQS 700
              +M + + + A+   G +SK +    +  RA ++     S  SQ     FP +RT    
Sbjct: 165  ERDMHLNSMHGANLEDGNISKLSSLDVSAARARSSTNQLHSSASQQSQTSFPHLRTKCAG 224

Query: 701  PLSKWQTGLHASNSKDIQSPCKKGSGQVSATPSTMLPPKPQAIDVAPLKSDKSKLVNFSH 880
                  TG    +S    SP      QV    S+      Q +D  P  ++ S ++NFSH
Sbjct: 225  ETEN-TTGKMLHDSLVGHSP------QVPLIASSSSSIAKQKLDPTP-PNNSSNIINFSH 276

Query: 881  FSRPAVNIKANLQXXXXXXXXXXXXXXXKLDKLRVEGNSPAEPSIIESNNTNWTAVASSS 1060
            F RPA  +K+N Q                ++      + P E S+I          ++S 
Sbjct: 277  FLRPASLLKSNPQKHGVPGTGGSRNLDSMVNNSSAANSQPHESSLIAIQG-GIRNESNSG 335

Query: 1061 CANSKV---QGTYQNNQNMLTRKTSDAT--ATCSEDFTDSTTKVSDQVTCQNSEFGRRSL 1225
            C N+ V    G   ++   L +  ++    A C  D  D   ++            +   
Sbjct: 336  CKNAVVPTIDGKSPSDAKPLEQSQTNKQPEAACLGDSADHDDRL------------KHRF 383

Query: 1226 ASGATEKCGEVGDGPEATVTXXXXXXXXXXXRTGKEAQNSCKRKGRYAEDSECQSEDVEF 1405
              GAT+   +     E+               +     N  KRK    EDSE  S+DVE 
Sbjct: 384  EVGATKGLADSEKAVESVFAASLCSRNSVEGASDDPPHNR-KRKCHDTEDSEWHSDDVEE 442

Query: 1406 ESMERKKPVPPRTT-SKRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKSDKASMLD 1582
            +  + K+    R   SKRSRAAEVHNLSERRRRDRINEKMRALQELIP+CNK DKASMLD
Sbjct: 443  DCNDVKRVTSARGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLD 502

Query: 1583 EAIEYLKTLQLQVQLXXXXXXXXXAPMVIPGSMQHFQVPQMAHLSHLXXXXXXXXXXXXX 1762
            EAIEYLKTLQLQVQ+          PM+ PG+M     P +                   
Sbjct: 503  EAIEYLKTLQLQVQIMSMGAGLFMPPMMFPGAMAPMNTPHI--------YPPMGIGMGYG 554

Query: 1763 XXXXXXXXXRPVMPLPSMHVSALPGSALHCQGAM--------SMSGMPGSNAPMTRCPGP 1918
                      P++ +P M     PG ++  Q  M         + G+PG   PM    GP
Sbjct: 555  IGMPDMNGGIPMVQVPHMQGMHFPGPSMPAQTVMHGLPSSNFQVLGLPGQGLPMPMPRGP 614

Query: 1919 GMQLSGHPISNIAMSGLAGAP 1981
                SG P   +  S +A AP
Sbjct: 615  VAPFSGGPF--VTNSSMAVAP 633


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