BLASTX nr result

ID: Ephedra28_contig00004533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004533
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20894.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]    58   1e-06
ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006833305.1| hypothetical protein AMTR_s00109p00045690 [A...    57   2e-06
ref|XP_002324819.2| hypothetical protein POPTR_0018s00800g [Popu...    57   3e-06
ref|XP_004288839.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
gb|EMJ23173.1| hypothetical protein PRUPE_ppa002759mg [Prunus pe...    55   9e-06

>emb|CBI20894.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKD 128
           +F +M +CGIAPN  TF+TLIWG+ E RQPW +E++   M++
Sbjct: 445 IFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486


>ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Vitis vinifera]
          Length = 635

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKD 128
           +F +M +CGIAPN  TF+TLIWG+ E RQPW +E++   M++
Sbjct: 445 IFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486


>emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
          Length = 635

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKD 128
           +F +M +CGIAPN  TF+TLIWG+ E RQPW +E++   M++
Sbjct: 445 IFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486


>ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Brachypodium distachyon]
          Length = 579

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKDSG 134
           V+ +M   G+ PN  TF+TLIWG+ E +QPW AEK+   MKD+G
Sbjct: 400 VYDKMRGAGVRPNLRTFETLIWGYSEQKQPWKAEKVLQMMKDAG 443


>ref|XP_006833305.1| hypothetical protein AMTR_s00109p00045690 [Amborella trichopoda]
           gi|548837981|gb|ERM98583.1| hypothetical protein
           AMTR_s00109p00045690 [Amborella trichopoda]
          Length = 614

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 21/44 (47%), Positives = 34/44 (77%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKDSG 134
           VF +M + G++PN  TF+TLIWG+ E +QPW AE++ + M+++G
Sbjct: 436 VFQKMTEYGVSPNLKTFETLIWGYGEAKQPWKAEEMLEKMEEAG 479


>ref|XP_002324819.2| hypothetical protein POPTR_0018s00800g [Populus trichocarpa]
           gi|550317744|gb|EEF03384.2| hypothetical protein
           POPTR_0018s00800g [Populus trichocarpa]
          Length = 610

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKD 128
           VF +M Q GI+PN  TF+TLIWGF E RQPW AE++   M +
Sbjct: 444 VFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTE 485


>ref|XP_004288839.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Fragaria vesca subsp. vesca]
          Length = 607

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKDSG 134
           +F +M + GI PN  TF+TLIWG+ E RQPW AE L   MK+ G
Sbjct: 421 LFEKMCEMGITPNVKTFETLIWGYGEARQPWKAEDLLHIMKEKG 464


>gb|EMJ23173.1| hypothetical protein PRUPE_ppa002759mg [Prunus persica]
          Length = 636

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +3

Query: 3   VFHRMVQCGIAPNRATFDTLIWGFVENRQPWNAEKLFDTMKDSG 134
           VF +M + GI+PN  TF+TLIWGF E + PW AE++   MK+ G
Sbjct: 444 VFDKMCEHGISPNLKTFETLIWGFGETKLPWKAEEILQIMKEFG 487


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