BLASTX nr result

ID: Ephedra28_contig00004523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004523
         (560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26034.1| unknown [Picea sitchensis]                              94   2e-17
gb|AEX12404.1| hypothetical protein 1_1149_01 [Pinus taeda]            83   5e-14
ref|XP_001764084.1| predicted protein [Physcomitrella patens] gi...    77   4e-12
ref|XP_002967627.1| hypothetical protein SELMODRAFT_440079 [Sela...    75   1e-11
ref|XP_002964407.1| hypothetical protein SELMODRAFT_438759 [Sela...    74   3e-11
gb|EUB59716.1| Adenosylhomocysteinase A [Echinococcus granulosus]      59   1e-06
emb|CDJ22597.1| BTB:POZ domain containing protein [Echinococcus ...    59   1e-06
emb|CDI80374.1| potassium channel tetramerisation domain contain...    56   5e-06
emb|CDI85982.1| potassium channel tetramerisation domain contain...    55   9e-06
emb|CDJ10560.1| BTB:POZ domain containing protein [Hymenolepis m...    55   9e-06

>gb|ABK26034.1| unknown [Picea sitchensis]
          Length = 193

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
 Frame = +3

Query: 9   SMLAALVLRWKNQQQSNGSTDDVFIDRDGDTFADVLNYLRNGVVCTEDLESLRKLRTEAE 188
           SMLAALVLR   +   N     + IDRDG  FA VLNYLR+G V  +D+  LR+L+ EAE
Sbjct: 48  SMLAALVLRHLGKDDKNNKNSVIRIDRDGQRFAHVLNYLRSGTVWLQDVGLLRELQEEAE 107

Query: 189 FFCLDGLRLLCDDEMERIKSNRMEEWRIVEEARDEEIRR-----IKKKFEDLEHKMNSFF 353
           FFCL GL  LC++E++RI+      WR   E   EE+++     I +KF          F
Sbjct: 108 FFCLAGLSALCEEEIQRIEEAEEAMWRKNIEILKEEVKKCLGEAILEKFGG----GGEVF 163

Query: 354 GVLCHKAPVITR--WRCAADEDEHHELPVFRTDVDF 455
            VL    P + R   RC  ++      P FR D DF
Sbjct: 164 SVL-RAPPRLGRLGLRCGGEQQ-----PEFRLDADF 193


>gb|AEX12404.1| hypothetical protein 1_1149_01 [Pinus taeda]
          Length = 121

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +3

Query: 81  IDRDGDTFADVLNYLRNGVVCTEDLESLRKLRTEAEFFCLDGLRLLCDDEMERIKSNRME 260
           IDRDG  FA VLNYLR+G V  +D+  LR+L+ EAEFFCL GL  LC++E++RI+  +  
Sbjct: 3   IDRDGQRFAHVLNYLRSGTVWLKDVGLLRELQEEAEFFCLAGLSALCEEEIQRIEDAQEA 62

Query: 261 EWRIVEEARDEEIRR-IKKKFEDLEHKMNSFFGVLCHKAPVITRWRCAADEDEHHELPVF 437
            WR   E   EE+++ + +   D          VL  +AP     RC  ++      P F
Sbjct: 63  TWRRNIEILKEEVKKCLGEAILDKFSGGGEVLSVL--RAPPRLGLRCGGEQQ-----PEF 115

Query: 438 RTDVDF 455
           R D DF
Sbjct: 116 RLDADF 121


>ref|XP_001764084.1| predicted protein [Physcomitrella patens]
           gi|162684823|gb|EDQ71223.1| predicted protein
           [Physcomitrella patens]
          Length = 191

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
 Frame = +3

Query: 36  WKNQQQSNGSTDDVFIDRDGDTFADVLNYLRNGVVCTEDLESLRKLRTEAEFFCLDGLRL 215
           W ++  +N  T  ++IDRD + F  VLNYLRNG V   D+ SL  LR EA+FF L+GL+ 
Sbjct: 65  WLSRHHTNNCT--LWIDRDAERFRHVLNYLRNGTVWLNDIPSLHGLREEADFFGLEGLKS 122

Query: 216 LCDD---EMERIKSNRMEEWRIVEEARDEEIR-RIKKKFEDLEHKMNSFFGVLCHKAPVI 383
           LCDD   ++E+ K  + ++W I       ++R  I+   ED +    +        AP  
Sbjct: 123 LCDDLVQDLEKKKEEKSKKWSI-------QLRGAIRDVLEDYQFPAANTCKDQMLGAPTS 175

Query: 384 T-RWRCAADEDEHHELPVFRTDVDF 455
             RWR           PVF+TD+DF
Sbjct: 176 RYRWRIE---------PVFQTDLDF 191


>ref|XP_002967627.1| hypothetical protein SELMODRAFT_440079 [Selaginella moellendorffii]
           gi|300164365|gb|EFJ30974.1| hypothetical protein
           SELMODRAFT_440079 [Selaginella moellendorffii]
          Length = 438

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/98 (40%), Positives = 63/98 (64%)
 Frame = +3

Query: 9   SMLAALVLRWKNQQQSNGSTDDVFIDRDGDTFADVLNYLRNGVVCTEDLESLRKLRTEAE 188
           SMLAA VLR+++ ++     +++ IDRDG  FA VLNYLR G +  EDL SLR +  EA+
Sbjct: 302 SMLAAWVLRYRSDEE-----EELRIDRDGSRFAHVLNYLREGTLWLEDLPSLRGIYEEAK 356

Query: 189 FFCLDGLRLLCDDEMERIKSNRMEEWRIVEEARDEEIR 302
           F+ L GL+ LC++ M  +++    E +  +E  +E ++
Sbjct: 357 FYQLKGLKALCEERMLEVEAKHAAESKRRKEEIEEALK 394


>ref|XP_002964407.1| hypothetical protein SELMODRAFT_438759 [Selaginella moellendorffii]
           gi|300168136|gb|EFJ34740.1| hypothetical protein
           SELMODRAFT_438759 [Selaginella moellendorffii]
          Length = 442

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/98 (40%), Positives = 62/98 (63%)
 Frame = +3

Query: 9   SMLAALVLRWKNQQQSNGSTDDVFIDRDGDTFADVLNYLRNGVVCTEDLESLRKLRTEAE 188
           SMLAA VLR+++ ++      ++ IDRDG  FA VLNYLR G +  EDL SLR +  EA+
Sbjct: 307 SMLAAWVLRYRSDEE------ELRIDRDGSRFAHVLNYLREGTLWLEDLPSLRGIYEEAK 360

Query: 189 FFCLDGLRLLCDDEMERIKSNRMEEWRIVEEARDEEIR 302
           F+ L GL+ LC++ M  +++    E +  +E  +E ++
Sbjct: 361 FYQLKGLKALCEERMLEVEAKHAAESKRRKEEIEEALK 398


>gb|EUB59716.1| Adenosylhomocysteinase A [Echinococcus granulosus]
          Length = 1291

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = +3

Query: 3   EDSMLAALVLRWKNQQQSNGSTDD---VFIDRDGDTFADVLNYLRNGVVCTED-LESLRK 170
           EDSML AL        + +  TDD   V +DR G  F  +LNYLR+G V   D  + L +
Sbjct: 35  EDSMLKALF-----SGRMDVKTDDDGWVLLDRSGKHFHLILNYLRDGSVPLPDNRQDLEE 89

Query: 171 LRTEAEFFCLDGLRLLCDDEMERIKSNRMEE 263
           L  E  F+CL+GLR +C++++E++ +   E+
Sbjct: 90  LLVETRFYCLEGLRRMCEEKLEKLVAETQEK 120


>emb|CDJ22597.1| BTB:POZ domain containing protein [Echinococcus granulosus]
          Length = 412

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = +3

Query: 3   EDSMLAALVLRWKNQQQSNGSTDD---VFIDRDGDTFADVLNYLRNGVVCTED-LESLRK 170
           EDSML AL        + +  TDD   V +DR G  F  +LNYLR+G V   D  + L +
Sbjct: 35  EDSMLKALF-----SGRMDVKTDDDGWVLLDRSGKHFHLILNYLRDGSVPLPDNRQDLEE 89

Query: 171 LRTEAEFFCLDGLRLLCDDEMERIKSNRMEE 263
           L  E  F+CL+GLR +C++++E++ +   E+
Sbjct: 90  LLVETRFYCLEGLRRMCEEKLEKLVAETQEK 120


>emb|CDI80374.1| potassium channel tetramerisation domain containing protein,
           putative [Eimeria acervulina]
          Length = 374

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +3

Query: 60  GSTDDVFIDRDGDTFADVLNYLRNGVVCTEDLE-SLRKLRTEAEFFCLDGLRLLCDDEME 236
           G T ++FIDR+GD+F+ VL++LRNG +C  +    L++L  EA FFC+  L    +D ++
Sbjct: 156 GETREIFIDRNGDSFSFVLDFLRNGALCCSNKPWLLQQLLLEARFFCIRPLEQEIEDRLK 215

Query: 237 RIK 245
           RI+
Sbjct: 216 RIR 218


>emb|CDI85982.1| potassium channel tetramerisation domain containing protein,
           putative [Eimeria praecox]
          Length = 376

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +3

Query: 60  GSTDDVFIDRDGDTFADVLNYLRNG-VVCTEDLESLRKLRTEAEFFCLDGLRLLCDDEME 236
           G T ++FIDR+GD+F  +L++LRNG + C+ +   L++L  EA FFC+  L    +D ++
Sbjct: 158 GETREIFIDRNGDSFTYILDFLRNGSLCCSNEPWLLQQLLLEARFFCIRALEEEIEDRLK 217

Query: 237 RIK 245
           RI+
Sbjct: 218 RIR 220


>emb|CDJ10560.1| BTB:POZ domain containing protein [Hymenolepis microstoma]
          Length = 388

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = +3

Query: 3   EDSMLAALVLRWKNQQQSNGSTDD---VFIDRDGDTFADVLNYLRNGVVCTEDL-ESLRK 170
           EDSML AL        + +  TDD   V +DR G  F  +LNYLR+G +   D  + L +
Sbjct: 35  EDSMLKALF-----SGRMDVKTDDDGWVLLDRSGKHFHLILNYLRDGSIPLPDSRQDLEE 89

Query: 171 LRTEAEFFCLDGLRLLCDDEMERIKSNRMEE 263
           L  E  F+CL+GLR  C++++E++ +   +E
Sbjct: 90  LLIETCFYCLEGLRRACEEKLEKMAAEESQE 120


Top