BLASTX nr result
ID: Ephedra28_contig00004498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00004498
(639 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 78 2e-12
gb|EMT11133.1| hypothetical protein F775_27384 [Aegilops tauschii] 75 1e-11
ref|XP_002519364.1| conserved hypothetical protein [Ricinus comm... 75 1e-11
gb|EXB36874.1| hypothetical protein L484_016479 [Morus notabilis] 74 4e-11
ref|XP_004952737.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 74 4e-11
gb|EOY25783.1| NADH dehydrogenase (ubiquinone)s [Theobroma cacao] 74 4e-11
gb|ACF80987.1| unknown [Zea mays] gi|194704350|gb|ACF86259.1| un... 74 4e-11
ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 73 6e-11
dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare] 73 6e-11
gb|ACG33942.1| hypothetical protein [Zea mays] 73 6e-11
ref|NP_563952.1| NADH dehydrogenase (ubiquinone) [Arabidopsis th... 72 1e-10
dbj|BAK03546.1| predicted protein [Hordeum vulgare subsp. vulgare] 71 2e-10
ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group] g... 71 3e-10
ref|XP_006836931.1| hypothetical protein AMTR_s00099p00150850 [A... 70 4e-10
ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 70 4e-10
ref|XP_004300033.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 70 5e-10
ref|XP_006395778.1| hypothetical protein EUTSA_v10005238mg [Eutr... 70 7e-10
ref|XP_002328810.1| predicted protein [Populus trichocarpa] gi|5... 70 7e-10
ref|XP_006417010.1| hypothetical protein EUTSA_v10009257mg [Eutr... 69 9e-10
ref|XP_006292145.1| hypothetical protein CARUB_v10018349mg [Caps... 69 9e-10
>ref|XP_003575171.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 3-B-like isoform 1 [Brachypodium distachyon]
gi|357149612|ref|XP_003575172.1| PREDICTED: NADH
dehydrogenase [ubiquinone] 1 beta subcomplex subunit
3-B-like isoform 2 [Brachypodium distachyon]
Length = 66
Score = 78.2 bits (191), Expect = 2e-12
Identities = 37/68 (54%), Positives = 43/68 (63%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP + LR A PG G A+V F +Y V E Y RL
Sbjct: 1 MASGGKGLNATGEFFRRRDEWRRHPMVGNQ--LRHATPGLGIAIVAFGIYLVGEAAYNRL 58
Query: 314 YPSSDSHH 291
YPSS +HH
Sbjct: 59 YPSSGNHH 66
>gb|EMT11133.1| hypothetical protein F775_27384 [Aegilops tauschii]
Length = 67
Score = 75.5 bits (184), Expect = 1e-11
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MAK LN+TGEFF+R DEWR HP + LR A PG G A+V F +Y V E Y RL
Sbjct: 1 MAKGGKGLNATGEFFRRRDEWRRHPMVGN--QLRHATPGLGIAIVAFGIYLVGEAAYNRL 58
Query: 314 Y-PSSDSHH 291
Y P+ D+HH
Sbjct: 59 YRPAGDNHH 67
>ref|XP_002519364.1| conserved hypothetical protein [Ricinus communis]
gi|223541431|gb|EEF42981.1| conserved hypothetical
protein [Ricinus communis]
Length = 69
Score = 75.5 bits (184), Expect = 1e-11
Identities = 36/62 (58%), Positives = 40/62 (64%)
Frame = -2
Query: 476 PLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSSDS 297
PL +TGEFFKR DEWR HP LS R A PG G A+V F +Y V E VY +LY S S
Sbjct: 4 PLGTTGEFFKRRDEWRKHPMLSN--QFRHATPGLGIALVAFGIYLVGEQVYDKLYAPSSS 61
Query: 296 HH 291
HH
Sbjct: 62 HH 63
>gb|EXB36874.1| hypothetical protein L484_016479 [Morus notabilis]
Length = 75
Score = 73.9 bits (180), Expect = 4e-11
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLY--- 312
+ PL TGEFF+R DEWR HP L+ LR A PG G A+V F +Y V E VYY+LY
Sbjct: 2 AKPLGPTGEFFRRRDEWRKHPMLTNQ--LRHATPGLGIALVAFGIYLVGEQVYYKLYAPS 59
Query: 311 PSSDSH 294
SSDSH
Sbjct: 60 SSSDSH 65
>ref|XP_004952737.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 3-B-like [Setaria italica]
Length = 67
Score = 73.9 bits (180), Expect = 4e-11
Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP + LR A PG G A+V F +Y V E Y RL
Sbjct: 1 MASGGKGLNATGEFFRRRDEWRRHPMVGNQ--LRHATPGLGIAIVAFGIYLVGEAAYNRL 58
Query: 314 Y-PSSDSHH 291
Y PS D HH
Sbjct: 59 YRPSGDHHH 67
>gb|EOY25783.1| NADH dehydrogenase (ubiquinone)s [Theobroma cacao]
Length = 68
Score = 73.9 bits (180), Expect = 4e-11
Identities = 35/62 (56%), Positives = 39/62 (62%)
Frame = -2
Query: 476 PLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSSDS 297
PL TGEFF+R DEWR HP L LR A PG G A+V F +Y V E VY R+Y S S
Sbjct: 4 PLGPTGEFFRRRDEWRKHPMLGNQ--LRHATPGLGIALVAFGIYLVGEQVYNRVYAPSSS 61
Query: 296 HH 291
HH
Sbjct: 62 HH 63
>gb|ACF80987.1| unknown [Zea mays] gi|194704350|gb|ACF86259.1| unknown [Zea mays]
gi|195604362|gb|ACG24011.1| hypothetical protein [Zea
mays] gi|195609402|gb|ACG26531.1| hypothetical protein
[Zea mays] gi|195618232|gb|ACG30946.1| hypothetical
protein [Zea mays] gi|195640558|gb|ACG39747.1|
hypothetical protein [Zea mays]
gi|413937325|gb|AFW71876.1| hypothetical protein
ZEAMMB73_344198 [Zea mays]
Length = 67
Score = 73.9 bits (180), Expect = 4e-11
Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP LR A PG G A+V F +Y V E Y RL
Sbjct: 1 MASGGKGLNATGEFFRRRDEWRRHPMAGN--QLRHATPGLGIAIVAFGIYLVGEAAYNRL 58
Query: 314 Y-PSSDSHH 291
Y PS D+HH
Sbjct: 59 YRPSGDNHH 67
>ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 3-B-like [Cucumis sativus]
Length = 74
Score = 73.2 bits (178), Expect = 6e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSS 303
+ PL STGEFF+R DEWR HP LS R A PG G A+V F +Y V E VY R+ S
Sbjct: 3 NKPLGSTGEFFRRRDEWRKHPMLSN--QFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60
Query: 302 DSHH 291
SHH
Sbjct: 61 SSHH 64
>dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 78
Score = 73.2 bits (178), Expect = 6e-11
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP + LR A PG G A+V F +Y V E Y RL
Sbjct: 12 MATGGKGLNATGEFFRRRDEWRKHPMVGN--QLRHATPGLGIAIVAFGIYLVGEAAYNRL 69
Query: 314 Y-PSSDSHH 291
Y P+ D+HH
Sbjct: 70 YRPAGDNHH 78
>gb|ACG33942.1| hypothetical protein [Zea mays]
Length = 67
Score = 73.2 bits (178), Expect = 6e-11
Identities = 37/69 (53%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP LR A PG G A+V F +Y V E Y RL
Sbjct: 1 MASGGKGLNATGEFFRRRDEWRRHPMAGNQ--LRHATPGLGIAIVAFGIYLVGEAAYNRL 58
Query: 314 Y-PSSDSHH 291
Y PS D HH
Sbjct: 59 YRPSGDHHH 67
>ref|NP_563952.1| NADH dehydrogenase (ubiquinone) [Arabidopsis thaliana]
gi|297849852|ref|XP_002892807.1| hypothetical protein
ARALYDRAFT_471620 [Arabidopsis lyrata subsp. lyrata]
gi|75191411|sp|Q9M9R9.1|NDB3B_ARATH RecName: Full=NADH
dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B
gi|7262687|gb|AAF43945.1|AC012188_22 Contains similarity
to an unknown protein from Arabidopsis thaliana
gb|AC004136.2. ESTs gb|Z47683, gb|Z47682, gb|AA597850,
gb|Z29736, gb|Z29735, gb|AA042623 come from this gene
[Arabidopsis thaliana]
gi|12083314|gb|AAG48816.1|AF332453_1 unknown protein
[Arabidopsis thaliana] gi|21592691|gb|AAM64640.1|
unknown [Arabidopsis thaliana]
gi|30725334|gb|AAP37689.1| At1g14450 [Arabidopsis
thaliana] gi|110736426|dbj|BAF00181.1| hypothetical
protein [Arabidopsis thaliana]
gi|297338649|gb|EFH69066.1| hypothetical protein
ARALYDRAFT_471620 [Arabidopsis lyrata subsp. lyrata]
gi|332191044|gb|AEE29165.1| NADH dehydrogenase
(ubiquinone) [Arabidopsis thaliana]
Length = 73
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYR-LYPS 306
+ PL +TGEFF+R DEWR HP LS M R ALPG G V F VY V E +Y + L PS
Sbjct: 2 AKPLGTTGEFFRRRDEWRKHPMLSNQM--RHALPGLGIGVAAFCVYLVGEQIYNKALAPS 59
Query: 305 SDSHH 291
SHH
Sbjct: 60 KSSHH 64
>dbj|BAK03546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 90
Score = 71.2 bits (173), Expect = 2e-10
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 494 MAKQSNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRL 315
MA LN+TGEFF+R DEWR HP + LR A PG G A+V F +Y E Y RL
Sbjct: 24 MATGGKVLNATGEFFRRRDEWRKHPMVGN--QLRHATPGLGIAIVAFGIYLAGEVAYNRL 81
Query: 314 Y-PSSDSHH 291
Y P+ D+HH
Sbjct: 82 YRPAGDNHH 90
>ref|NP_001173027.1| Os02g0564200 [Oryza sativa Japonica Group]
gi|46390154|dbj|BAD15588.1| unknown protein [Oryza
sativa Japonica Group] gi|46390350|dbj|BAD15815.1|
unknown protein [Oryza sativa Japonica Group]
gi|125539926|gb|EAY86321.1| hypothetical protein
OsI_07695 [Oryza sativa Indica Group]
gi|125582543|gb|EAZ23474.1| hypothetical protein
OsJ_07168 [Oryza sativa Japonica Group]
gi|215704134|dbj|BAG92974.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765172|dbj|BAG86869.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255671009|dbj|BAH91756.1| Os02g0564200 [Oryza sativa
Japonica Group]
Length = 66
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -2
Query: 473 LNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLY-PSSDS 297
LN+TGEFF+R D+WR HP + LR A PG G A+V F +Y V E Y RLY PS D
Sbjct: 6 LNATGEFFRRRDDWRRHPMVGNQ--LRHATPGLGIAIVAFGIYLVGEAAYNRLYRPSGDH 63
Query: 296 HH 291
HH
Sbjct: 64 HH 65
>ref|XP_006836931.1| hypothetical protein AMTR_s00099p00150850 [Amborella trichopoda]
gi|548839495|gb|ERM99784.1| hypothetical protein
AMTR_s00099p00150850 [Amborella trichopoda]
Length = 70
Score = 70.5 bits (171), Expect = 4e-10
Identities = 34/60 (56%), Positives = 38/60 (63%)
Frame = -2
Query: 476 PLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSSDS 297
PL STGEFF+R DEWR HP L LR A PG G A+V F++YCV E Y R SS S
Sbjct: 4 PLGSTGEFFRRRDEWRKHPMLGN--QLRHATPGLGIAIVAFTIYCVGEAAYNRFSSSSSS 61
>ref|XP_002268875.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 3-B [Vitis vinifera]
Length = 70
Score = 70.5 bits (171), Expect = 4e-10
Identities = 35/61 (57%), Positives = 40/61 (65%)
Frame = -2
Query: 476 PLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSSDS 297
PL TGEFF+R DEWR HP L+K LR A PG G AVV FS+Y V E Y +LY S S
Sbjct: 4 PLGPTGEFFRRRDEWRKHPMLNK--QLRHATPGLGIAVVAFSIYLVGEAAYNKLYAPSHS 61
Query: 296 H 294
+
Sbjct: 62 N 62
>ref|XP_004300033.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
subunit 3-B-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 70.1 bits (170), Expect = 5e-10
Identities = 37/65 (56%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLY--P 309
S PL +TGEFF+R DEWR HP LS LR A PG G A+V F VY V E Y R+ P
Sbjct: 4 SKPLGTTGEFFRRRDEWRKHPMLSN--QLRHATPGLGIALVAFGVYLVGEQFYNRVIAPP 61
Query: 308 SSDSH 294
SS SH
Sbjct: 62 SSSSH 66
>ref|XP_006395778.1| hypothetical protein EUTSA_v10005238mg [Eutrema salsugineum]
gi|557092417|gb|ESQ33064.1| hypothetical protein
EUTSA_v10005238mg [Eutrema salsugineum]
Length = 71
Score = 69.7 bits (169), Expect = 7e-10
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSS 303
+ PL +TGEFF+R DEWR HP LS M R ALPG G V F VY V E +Y +L S
Sbjct: 2 AKPLGTTGEFFRRRDEWRKHPMLSNQM--RHALPGLGIGVAAFCVYLVGEQIYSKLLVPS 59
Query: 302 DSHH 291
S H
Sbjct: 60 QSSH 63
>ref|XP_002328810.1| predicted protein [Populus trichocarpa]
gi|566168345|ref|XP_006385098.1| hypothetical protein
POPTR_0004s23900g [Populus trichocarpa]
gi|118484462|gb|ABK94107.1| unknown [Populus
trichocarpa] gi|118487969|gb|ABK95806.1| unknown
[Populus trichocarpa] gi|550341866|gb|ERP62895.1|
hypothetical protein POPTR_0004s23900g [Populus
trichocarpa]
Length = 68
Score = 69.7 bits (169), Expect = 7e-10
Identities = 33/61 (54%), Positives = 38/61 (62%)
Frame = -2
Query: 476 PLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLYPSSDS 297
PL STGEFF+R DEWR HP L+ R A PG G A+V F VY V E VY ++Y S
Sbjct: 4 PLGSTGEFFRRRDEWRKHPMLTN--QFRHATPGLGIALVAFGVYLVGEQVYNKIYAPSSD 61
Query: 296 H 294
H
Sbjct: 62 H 62
>ref|XP_006417010.1| hypothetical protein EUTSA_v10009257mg [Eutrema salsugineum]
gi|557094781|gb|ESQ35363.1| hypothetical protein
EUTSA_v10009257mg [Eutrema salsugineum]
Length = 73
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYR-LYPS 306
+ PL +TGEFF+R DEWR HP LS M R ALPG G V F VY V E +Y + L PS
Sbjct: 2 AKPLGTTGEFFRRRDEWRKHPMLSNQM--RHALPGLGIGVAAFCVYLVGEQIYSKALVPS 59
Query: 305 SDSH 294
SH
Sbjct: 60 KSSH 63
>ref|XP_006292145.1| hypothetical protein CARUB_v10018349mg [Capsella rubella]
gi|482560852|gb|EOA25043.1| hypothetical protein
CARUB_v10018349mg [Capsella rubella]
Length = 72
Score = 69.3 bits (168), Expect = 9e-10
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -2
Query: 482 SNPLNSTGEFFKRTDEWRNHPWLSKNMNLRTALPGFGTAVVIFSVYCVAENVYYRLY-PS 306
+ PL +TGEFF+R DEWR HP LS M R ALPG G V F VY V E +Y +L PS
Sbjct: 2 AKPLGTTGEFFRRRDEWRKHPMLSNQM--RHALPGLGIGVGAFCVYLVGEQIYSKLMAPS 59
Query: 305 SDSHH 291
S S H
Sbjct: 60 SQSSH 64