BLASTX nr result
ID: Ephedra28_contig00004438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00004438
(692 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22548.1| unknown [Picea sitchensis] 129 7e-28
ref|XP_006841855.1| hypothetical protein AMTR_s00003p00271230 [A... 124 2e-26
ref|XP_006298953.1| hypothetical protein CARUB_v10015078mg [Caps... 124 3e-26
ref|XP_006409030.1| hypothetical protein EUTSA_v10002049mg [Eutr... 124 4e-26
ref|XP_006409029.1| hypothetical protein EUTSA_v10002049mg [Eutr... 124 4e-26
gb|AAM64943.1| unknown [Arabidopsis thaliana] gi|58761181|gb|AAW... 123 6e-26
ref|NP_565491.1| protein THYLAKOID FORMATION 1 [Arabidopsis thal... 123 6e-26
ref|XP_004293467.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 122 8e-26
gb|ABV89647.1| chloroplast light-regulated protein [Brassica rapa] 122 8e-26
ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, ch... 122 1e-25
ref|XP_002884230.1| hypothetical protein ARALYDRAFT_900469 [Arab... 121 2e-25
ref|XP_006447402.1| hypothetical protein CICLE_v10016098mg [Citr... 120 3e-25
ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl... 120 5e-25
ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 120 5e-25
ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 120 5e-25
emb|CBI28372.3| unnamed protein product [Vitis vinifera] 120 5e-25
gb|EOX99296.1| Photosystem II reaction center PSB29 protein [The... 119 7e-25
gb|EMJ16964.1| hypothetical protein PRUPE_ppa009554mg [Prunus pe... 119 9e-25
gb|AFK45541.1| unknown [Medicago truncatula] 119 1e-24
gb|ACJ84665.1| unknown [Medicago truncatula] gi|388509564|gb|AFK... 119 1e-24
>gb|ABK22548.1| unknown [Picea sitchensis]
Length = 304
Score = 129 bits (325), Expect = 7e-28
Identities = 79/153 (51%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Frame = +2
Query: 248 MAGTLASACQSP--TLHKHSVCSSHIANANSLSSPIRLRFREFPPQCNVLSVGSGN---P 412
MAG LAS C + L + + I +N++ S +R R Q +L+V + P
Sbjct: 1 MAGALASVCPTGFRRLTERTTMLQGIRPSNNIFSSLRWRTITGHDQL-LLTVNISSRSLP 59
Query: 413 RSVACXXXXXXXXXXXXXXXXXXXXXKSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKR 592
++ + KSAFLKAYKRPIPSIYNN IQELIVQQHLMRYKR
Sbjct: 60 KASSSLSVTRCSMSITASDIPTVAETKSAFLKAYKRPIPSIYNNVIQELIVQQHLMRYKR 119
Query: 593 TYQYDAVFALGFVTVFDQLMDGYPSDEDREAIF 691
TYQYDAVFALGFV+V+DQLMDGYPSD D EAIF
Sbjct: 120 TYQYDAVFALGFVSVYDQLMDGYPSDGDSEAIF 152
>ref|XP_006841855.1| hypothetical protein AMTR_s00003p00271230 [Amborella trichopoda]
gi|548843876|gb|ERN03530.1| hypothetical protein
AMTR_s00003p00271230 [Amborella trichopoda]
Length = 298
Score = 124 bits (312), Expect = 2e-26
Identities = 67/149 (44%), Positives = 87/149 (58%)
Frame = +2
Query: 245 AMAGTLASACQSPTLHKHSVCSSHIANANSLSSPIRLRFREFPPQCNVLSVGSGNPRSVA 424
A +L+ A +P + +C ++N P RLR N S+ S +P +
Sbjct: 2 AAISSLSFAAATPASERKGLCRPTLSNNLFNIEPFRLRSTNGSYLVNARSIASYSPSIIR 61
Query: 425 CXXXXXXXXXXXXXXXXXXXXXKSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQY 604
C K FL++YKRPIPSIYN +QELIVQQHL+RYKRTYQY
Sbjct: 62 CVSSATDVPTVAET--------KGNFLRSYKRPIPSIYNTVLQELIVQQHLLRYKRTYQY 113
Query: 605 DAVFALGFVTVFDQLMDGYPSDEDREAIF 691
DA+ ALGFVTV+DQLM+G+PS+EDR+AIF
Sbjct: 114 DAILALGFVTVYDQLMEGFPSNEDRDAIF 142
>ref|XP_006298953.1| hypothetical protein CARUB_v10015078mg [Capsella rubella]
gi|482567662|gb|EOA31851.1| hypothetical protein
CARUB_v10015078mg [Capsella rubella]
Length = 301
Score = 124 bits (311), Expect = 3e-26
Identities = 75/148 (50%), Positives = 88/148 (59%)
Frame = +2
Query: 248 MAGTLASACQSPTLHKHSVCSSHIANANSLSSPIRLRFREFPPQCNVLSVGSGNPRSVAC 427
MA T S+ P L + S S+ A + L+S IR+ C S S RS +
Sbjct: 1 MAATAISSLSFPALGQSSDKISNFALSRPLASAIRI--------CTKFSRHSLTYRSTS- 51
Query: 428 XXXXXXXXXXXXXXXXXXXXXKSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYD 607
KS FLKAYKRPIPSIYN +QELIVQQHLMRYKRTY+YD
Sbjct: 52 -RSSIHCMSSVTDDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYD 110
Query: 608 AVFALGFVTVFDQLMDGYPSDEDREAIF 691
VFALGFVTV+DQLM+GYPSD+DR+AIF
Sbjct: 111 PVFALGFVTVYDQLMEGYPSDQDRDAIF 138
>ref|XP_006409030.1| hypothetical protein EUTSA_v10002049mg [Eutrema salsugineum]
gi|557110186|gb|ESQ50483.1| hypothetical protein
EUTSA_v10002049mg [Eutrema salsugineum]
Length = 306
Score = 124 bits (310), Expect = 4e-26
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
KS FLKAYKRPIPSIYN +QELIVQQHLMRYKRTY+YD VFALGFVTV+DQLMDGYPSD
Sbjct: 75 KSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMDGYPSD 134
Query: 671 EDREAIF 691
+DR+AIF
Sbjct: 135 QDRDAIF 141
>ref|XP_006409029.1| hypothetical protein EUTSA_v10002049mg [Eutrema salsugineum]
gi|557110185|gb|ESQ50482.1| hypothetical protein
EUTSA_v10002049mg [Eutrema salsugineum]
Length = 305
Score = 124 bits (310), Expect = 4e-26
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
KS FLKAYKRPIPSIYN +QELIVQQHLMRYKRTY+YD VFALGFVTV+DQLMDGYPSD
Sbjct: 74 KSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMDGYPSD 133
Query: 671 EDREAIF 691
+DR+AIF
Sbjct: 134 QDRDAIF 140
>gb|AAM64943.1| unknown [Arabidopsis thaliana] gi|58761181|gb|AAW82331.1|
chloroplast thylakoid formation 1 [Arabidopsis thaliana]
Length = 300
Score = 123 bits (308), Expect = 6e-26
Identities = 74/148 (50%), Positives = 89/148 (60%)
Frame = +2
Query: 248 MAGTLASACQSPTLHKHSVCSSHIANANSLSSPIRLRFREFPPQCNVLSVGSGNPRSVAC 427
MA T S+ P L + S+ A++ L+S IR+ C S S N RS +
Sbjct: 1 MAATAISSLSFPALGQSDKISN-FASSRPLASAIRI--------CTKFSRLSLNSRSTS- 50
Query: 428 XXXXXXXXXXXXXXXXXXXXXKSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYD 607
KS FLKAYKRPIPSIYN +QELIVQQHLMRYK+TY+YD
Sbjct: 51 -KSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYD 109
Query: 608 AVFALGFVTVFDQLMDGYPSDEDREAIF 691
VFALGFVTV+DQLM+GYPSD+DR+AIF
Sbjct: 110 PVFALGFVTVYDQLMEGYPSDQDRDAIF 137
>ref|NP_565491.1| protein THYLAKOID FORMATION 1 [Arabidopsis thaliana]
gi|75206547|sp|Q9SKT0.1|THF1_ARATH RecName: Full=Protein
THYLAKOID FORMATION 1, chloroplastic; Flags: Precursor
gi|4454459|gb|AAD20906.1| expressed protein [Arabidopsis
thaliana] gi|17065446|gb|AAL32877.1| Unknown protein
[Arabidopsis thaliana] gi|20148535|gb|AAM10158.1|
unknown protein [Arabidopsis thaliana]
gi|330251998|gb|AEC07092.1| protein THYLAKOID FORMATION
1 [Arabidopsis thaliana]
Length = 300
Score = 123 bits (308), Expect = 6e-26
Identities = 74/148 (50%), Positives = 89/148 (60%)
Frame = +2
Query: 248 MAGTLASACQSPTLHKHSVCSSHIANANSLSSPIRLRFREFPPQCNVLSVGSGNPRSVAC 427
MA T S+ P L + S+ A++ L+S IR+ C S S N RS +
Sbjct: 1 MAATAISSLSFPALGQSDKISN-FASSRPLASAIRI--------CTKFSRLSLNSRSTS- 50
Query: 428 XXXXXXXXXXXXXXXXXXXXXKSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYD 607
KS FLKAYKRPIPSIYN +QELIVQQHLMRYK+TY+YD
Sbjct: 51 -KSLIHCMSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYD 109
Query: 608 AVFALGFVTVFDQLMDGYPSDEDREAIF 691
VFALGFVTV+DQLM+GYPSD+DR+AIF
Sbjct: 110 PVFALGFVTVYDQLMEGYPSDQDRDAIF 137
>ref|XP_004293467.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 292
Score = 122 bits (307), Expect = 8e-26
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPS+YN+ +QELIVQQHLMRYKRTY+YD VFALGFVTV+DQLMDGYPSD
Sbjct: 70 KLNFLKAYKRPIPSVYNSVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMDGYPSD 129
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 130 EDRDAIF 136
>gb|ABV89647.1| chloroplast light-regulated protein [Brassica rapa]
Length = 273
Score = 122 bits (307), Expect = 8e-26
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
KS FLKAYKRPIPSIYN +QELIVQQHLMRYKRTY+YD VFALGFVTV+DQLMDGYPSD
Sbjct: 72 KSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMDGYPSD 131
Query: 671 EDREAIF 691
+DR++IF
Sbjct: 132 QDRDSIF 138
>ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, chloroplastic-like
[Cucumis sativus] gi|449493105|ref|XP_004159194.1|
PREDICTED: protein THYLAKOID FORMATION 1,
chloroplastic-like [Cucumis sativus]
Length = 298
Score = 122 bits (306), Expect = 1e-25
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPSIYN +QELIVQQHLMRYKRTY+YD VFALGFVTV+DQLM+GYPSD
Sbjct: 75 KLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMEGYPSD 134
Query: 671 EDREAIF 691
EDREAIF
Sbjct: 135 EDREAIF 141
>ref|XP_002884230.1| hypothetical protein ARALYDRAFT_900469 [Arabidopsis lyrata subsp.
lyrata] gi|297330070|gb|EFH60489.1| hypothetical protein
ARALYDRAFT_900469 [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 121 bits (303), Expect = 2e-25
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
KS FLKAYKRPIPSIYN +QELIVQQHLMRYK+TY+YD VFALGFVTV+DQLM+GYPSD
Sbjct: 70 KSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSD 129
Query: 671 EDREAIF 691
+DR+AIF
Sbjct: 130 QDRDAIF 136
>ref|XP_006447402.1| hypothetical protein CICLE_v10016098mg [Citrus clementina]
gi|568831117|ref|XP_006469826.1| PREDICTED: protein
THYLAKOID FORMATION1, chloroplastic-like [Citrus
sinensis] gi|557550013|gb|ESR60642.1| hypothetical
protein CICLE_v10016098mg [Citrus clementina]
Length = 299
Score = 120 bits (302), Expect = 3e-25
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLK YKRPIPSIYN +QELIVQQHLMRYKRTYQYD VFALGFVTV+D+LM+GYPSD
Sbjct: 77 KMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSD 136
Query: 671 EDREAIF 691
EDREAIF
Sbjct: 137 EDREAIF 143
>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
vinifera]
Length = 299
Score = 120 bits (300), Expect = 5e-25
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLK YKRPIPSIYN +QEL+VQQHLMRYKRTY+YDAVFALGFVTV+DQLMDGYPSD
Sbjct: 75 KMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGFVTVYDQLMDGYPSD 134
Query: 671 EDREAIF 691
EDR+ IF
Sbjct: 135 EDRDIIF 141
>ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like isoform
X1 [Glycine max]
Length = 291
Score = 120 bits (300), Expect = 5e-25
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPSIYN +QELIVQQHLMRYKR+Y+YDAVFALGFVTV++QLM+GYPSD
Sbjct: 72 KLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSD 131
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 132 EDRDAIF 138
>ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Glycine max]
Length = 291
Score = 120 bits (300), Expect = 5e-25
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPSIYN +QELIVQQHLMRYKR+Y+YDAVFALGFVTV++QLM+GYPSD
Sbjct: 72 KLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSD 131
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 132 EDRDAIF 138
>emb|CBI28372.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 120 bits (300), Expect = 5e-25
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLK YKRPIPSIYN +QEL+VQQHLMRYKRTY+YDAVFALGFVTV+DQLMDGYPSD
Sbjct: 19 KMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGFVTVYDQLMDGYPSD 78
Query: 671 EDREAIF 691
EDR+ IF
Sbjct: 79 EDRDIIF 85
>gb|EOX99296.1| Photosystem II reaction center PSB29 protein [Theobroma cacao]
Length = 298
Score = 119 bits (299), Expect = 7e-25
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPS+YN +QELIVQQHLMRYK TY+YDAVFALGFVTV+DQLM+GYPSD
Sbjct: 76 KLNFLKAYKRPIPSVYNTVLQELIVQQHLMRYKWTYRYDAVFALGFVTVYDQLMEGYPSD 135
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 136 EDRDAIF 142
>gb|EMJ16964.1| hypothetical protein PRUPE_ppa009554mg [Prunus persica]
Length = 287
Score = 119 bits (298), Expect = 9e-25
Identities = 55/67 (82%), Positives = 62/67 (92%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPS+YN +QELIVQQHL++YK++Y+YD VFALGFVTVFDQLMDGYPSD
Sbjct: 75 KLNFLKAYKRPIPSVYNTVLQELIVQQHLIKYKKSYRYDPVFALGFVTVFDQLMDGYPSD 134
Query: 671 EDREAIF 691
EDREAIF
Sbjct: 135 EDREAIF 141
>gb|AFK45541.1| unknown [Medicago truncatula]
Length = 303
Score = 119 bits (297), Expect = 1e-24
Identities = 55/67 (82%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPSIYN+ +QELIVQQHLMRYK++Y+YD VFALGFVTV+DQLM+GYPSD
Sbjct: 78 KLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSD 137
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 138 EDRDAIF 144
>gb|ACJ84665.1| unknown [Medicago truncatula] gi|388509564|gb|AFK42848.1| unknown
[Medicago truncatula]
Length = 219
Score = 119 bits (297), Expect = 1e-24
Identities = 55/67 (82%), Positives = 63/67 (94%)
Frame = +2
Query: 491 KSAFLKAYKRPIPSIYNNFIQELIVQQHLMRYKRTYQYDAVFALGFVTVFDQLMDGYPSD 670
K FLKAYKRPIPSIYN+ +QELIVQQHLMRYK++Y+YD VFALGFVTV+DQLM+GYPSD
Sbjct: 78 KLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSD 137
Query: 671 EDREAIF 691
EDR+AIF
Sbjct: 138 EDRDAIF 144