BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004421
         (1231 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK27148.1| unknown [Picea sitchensis]                              98   6e-18
gb|ADE77490.1| unknown [Picea sitchensis]                              81   8e-13
ref|XP_006829204.1| hypothetical protein AMTR_s00001p00271750 [A...    77   1e-11
ref|XP_001783259.1| predicted protein [Physcomitrella patens] gi...    76   3e-11
ref|XP_001765849.1| predicted protein [Physcomitrella patens] gi...    71   8e-10
ref|XP_001767794.1| predicted protein [Physcomitrella patens] gi...    71   1e-09
ref|XP_002981208.1| hypothetical protein SELMODRAFT_444765 [Sela...    66   3e-08
ref|XP_002982679.1| hypothetical protein SELMODRAFT_421985 [Sela...    66   3e-08
ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II tra...    63   3e-07
ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II tra...    63   3e-07
ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II tra...    63   3e-07
ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II tra...    63   3e-07
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    63   3e-07
ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II tra...    60   1e-06
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra...    60   1e-06
ref|XP_004173720.1| PREDICTED: uncharacterized LOC101220890, par...    59   5e-06
ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220...    59   5e-06
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...    59   5e-06
emb|CBI29079.3| unnamed protein product [Vitis vinifera]               59   5e-06
ref|XP_006597111.1| PREDICTED: mediator of RNA polymerase II tra...    58   9e-06

>gb|ABK27148.1| unknown [Picea sitchensis]
          Length = 89

 Score = 98.2 bits (243), Expect = 6e-18
 Identities = 43/82 (52%), Positives = 62/82 (75%)
 Frame = +3

Query: 15  MKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPANFKEE 194
           MK++Y+ E+K+LF KL+ +CQ+PM PDQ EK KHYK  LQRV+ YF   K++IP  FKE+
Sbjct: 1   MKEMYYPEIKELFTKLSNKCQQPMAPDQFEKLKHYKTTLQRVMAYFKVQKSSIPPGFKED 60

Query: 195 HVEALEKRVQNILNSFRPKPSA 260
            V++ E+++Q IL SF+ + SA
Sbjct: 61  KVDSFERQIQAILGSFKKRHSA 82


>gb|ADE77490.1| unknown [Picea sitchensis]
          Length = 194

 Score = 81.3 bits (199), Expect = 8e-13
 Identities = 39/80 (48%), Positives = 56/80 (70%)
 Frame = +3

Query: 6   LQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPANF 185
           LQ +K +Y+ EL++L   L+    +PM PD  EK K YK  LQR++ YF+ PK++IP  F
Sbjct: 101 LQNLKAMYYPELENLLTALSMILLQPMVPDSFEKLKLYKNTLQRMMAYFHVPKSSIPPRF 160

Query: 186 KEEHVEALEKRVQNILNSFR 245
           KE+ V+A EK++Q ILNSF+
Sbjct: 161 KEDKVDAFEKQIQAILNSFK 180


>ref|XP_006829204.1| hypothetical protein AMTR_s00001p00271750 [Amborella trichopoda]
           gi|548834183|gb|ERM96620.1| hypothetical protein
           AMTR_s00001p00271750 [Amborella trichopoda]
          Length = 1397

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 36/90 (40%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQK-------PMPPDQSEKFKHYKAQLQRVLNYFNAP 161
           +++++K++Y+ EL +LFQKL  +CQ+       P+  DQ EK +HYK  L+R++ YF AP
Sbjct: 639 KIKSLKEMYYAELNELFQKLVTKCQQQDTLVQPPLHSDQMEKLRHYKNLLERIIAYFQAP 698

Query: 162 KNAIPANFKEEHVEALEKRVQNILNSFRPK 251
           K+++ ++F+E+ + A EK++ NIL  F+ K
Sbjct: 699 KSSLSSSFREK-LPAFEKQILNILALFKQK 727


>ref|XP_001783259.1| predicted protein [Physcomitrella patens]
           gi|162665263|gb|EDQ51954.1| predicted protein
           [Physcomitrella patens]
          Length = 1457

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 31/83 (37%), Positives = 55/83 (66%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPAN 182
           +LQ +KD Y  ++ +LF+ L+ R  +PMP +Q +K KHYK  L R++ Y   PK+ +P  
Sbjct: 569 KLQLLKDKYLQDMTELFRMLSTRSTQPMPAEQLQKLKHYKDVLHRMIPYLRVPKDRVPKE 628

Query: 183 FKEEHVEALEKRVQNILNSFRPK 251
           F ++ V+A EK++ +I+ +F+ +
Sbjct: 629 FNQDKVDAFEKQIVSIMETFKKR 651


>ref|XP_001765849.1| predicted protein [Physcomitrella patens]
           gi|162683026|gb|EDQ69440.1| predicted protein
           [Physcomitrella patens]
          Length = 118

 Score = 71.2 bits (173), Expect = 8e-10
 Identities = 30/81 (37%), Positives = 51/81 (62%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPAN 182
           +LQ +K LY  ++ +L+  L  R  +PMP +Q +K KHYK  L R++ Y   P++ +P  
Sbjct: 31  QLQELKKLYLDDMIELYSMLTARSNQPMPAEQLQKLKHYKDVLHRMIPYLRVPEDRVPKE 90

Query: 183 FKEEHVEALEKRVQNILNSFR 245
           F  + V+A EK++ NI+ +F+
Sbjct: 91  FNADKVDAFEKQIVNIMETFK 111


>ref|XP_001767794.1| predicted protein [Physcomitrella patens]
           gi|162680876|gb|EDQ67308.1| predicted protein
           [Physcomitrella patens]
          Length = 284

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 32/81 (39%), Positives = 49/81 (60%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPAN 182
           +LQA+ + +   + +L+  L  R  +PMP +Q +K KHYK  L R++ Y   PK  IPA 
Sbjct: 201 KLQALSNTHLSSMVELYSTLTARSNQPMPAEQLQKLKHYKDVLHRMIPYMRVPKERIPAE 260

Query: 183 FKEEHVEALEKRVQNILNSFR 245
           F  E V A E++V NI+ +F+
Sbjct: 261 FNREKVIAFERQVTNIMETFQ 281


>ref|XP_002981208.1| hypothetical protein SELMODRAFT_444765 [Selaginella moellendorffii]
           gi|300151262|gb|EFJ17909.1| hypothetical protein
           SELMODRAFT_444765 [Selaginella moellendorffii]
          Length = 880

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 30/83 (36%), Positives = 51/83 (61%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPAN 182
           +LQ +KD Y  ++ DL   L  R Q+ MP DQ +K  HYK  L R++ Y +A +  +P  
Sbjct: 245 KLQNLKDKYLPDMNDLRNMLVARSQQSMPADQLQKLNHYKDVLSRMIPYLSASRTNLPKE 304

Query: 183 FKEEHVEALEKRVQNILNSFRPK 251
           F+ + +EA EK++ +I+ +F+ +
Sbjct: 305 FRLDKLEAFEKQIVSIMETFKKR 327


>ref|XP_002982679.1| hypothetical protein SELMODRAFT_421985 [Selaginella moellendorffii]
           gi|300149778|gb|EFJ16432.1| hypothetical protein
           SELMODRAFT_421985 [Selaginella moellendorffii]
          Length = 830

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 30/83 (36%), Positives = 51/83 (61%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQKPMPPDQSEKFKHYKAQLQRVLNYFNAPKNAIPAN 182
           +LQ +KD Y  ++ DL   L  R Q+ MP DQ +K  HYK  L R++ Y +A +  +P  
Sbjct: 241 KLQNLKDKYLPDMNDLRNMLVARSQQSMPADQLQKLNHYKDVLSRMIPYLSASRTNLPKE 300

Query: 183 FKEEHVEALEKRVQNILNSFRPK 251
           F+ + +EA EK++ +I+ +F+ +
Sbjct: 301 FRLDKLEAFEKQIVSIMETFKKR 323


>ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X4 [Setaria italica]
          Length = 1328

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
 Frame = +3

Query: 6   LQAMKDLYFVELKDLFQKLNYRCQ---KPMPP----DQSEKFKHYKAQLQRVLNYFNAPK 164
           ++++KD YF EL DL+ K++ + Q     MP     DQ EK K++KA L+R L++    K
Sbjct: 572 IKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVNK 631

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPKP 254
           ++I   F+E+ +   E+++ NILNS R KP
Sbjct: 632 SSIQPGFREK-IPIYERQIVNILNSQRRKP 660


>ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X3 [Setaria italica]
          Length = 1329

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
 Frame = +3

Query: 6   LQAMKDLYFVELKDLFQKLNYRCQ---KPMPP----DQSEKFKHYKAQLQRVLNYFNAPK 164
           ++++KD YF EL DL+ K++ + Q     MP     DQ EK K++KA L+R L++    K
Sbjct: 572 IKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVNK 631

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPKP 254
           ++I   F+E+ +   E+++ NILNS R KP
Sbjct: 632 SSIQPGFREK-IPIYERQIVNILNSQRRKP 660


>ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X2 [Setaria italica]
          Length = 1361

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
 Frame = +3

Query: 6   LQAMKDLYFVELKDLFQKLNYRCQ---KPMPP----DQSEKFKHYKAQLQRVLNYFNAPK 164
           ++++KD YF EL DL+ K++ + Q     MP     DQ EK K++KA L+R L++    K
Sbjct: 572 IKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVNK 631

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPKP 254
           ++I   F+E+ +   E+++ NILNS R KP
Sbjct: 632 SSIQPGFREK-IPIYERQIVNILNSQRRKP 660


>ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Setaria italica]
          Length = 1362

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
 Frame = +3

Query: 6   LQAMKDLYFVELKDLFQKLNYRCQ---KPMPP----DQSEKFKHYKAQLQRVLNYFNAPK 164
           ++++KD YF EL DL+ K++ + Q     MP     DQ EK K++KA L+R L++    K
Sbjct: 572 IKSLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMKNFKALLERTLHFLQVNK 631

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPKP 254
           ++I   F+E+ +   E+++ NILNS R KP
Sbjct: 632 SSIQPGFREK-IPIYERQIVNILNSQRRKP 660


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 29/89 (32%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQK----PMPP--DQSEKFKHYKAQLQRVLNYFNAPK 164
           +++AMK++YF EL +++ K+  + Q+    P PP  +Q EK + +K+ L+R++ +   PK
Sbjct: 615 KIKAMKEMYFPELNEMYHKIATKLQQHDSLPQPPKTEQLEKLRLFKSMLERIITFLQVPK 674

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPK 251
           +++  +F+E+ + + EK++ N +N+ RPK
Sbjct: 675 SSVMPSFREK-LGSYEKQIINFINTNRPK 702



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
 Frame = +1

Query: 424  VPQEQKHVTPF----QQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQ 591
            VPQ Q H +      Q MN+Q SV +MQ N ++ LQ + +  +  S   +SQQ++ + MQ
Sbjct: 725  VPQVQSHESQMNPQMQSMNMQGSVQTMQQNNMSSLQQTPLPSL--SGVSSSQQSMMSSMQ 782

Query: 592  SQAALNT-QGANVNSLQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQGSNN- 753
            S + L++ QG  ++SLQQ        NP+   Q  NI +L  Q G+N +Q ++   SN+ 
Sbjct: 783  SASNLDSVQGNVMSSLQQGGLGSHQQNPVSSAQQANIPNLSSQSGVNMLQPNISLQSNSN 842

Query: 754  --PHGHI 768
               H H+
Sbjct: 843  MLQHQHL 849


>ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Cicer arietinum]
          Length = 1503

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
 Frame = +3

Query: 3    RLQAMKDLYFVELKDLFQKLNYRCQK----PMPP--DQSEKFKHYKAQLQRVLNYFNAPK 164
            ++Q MK+ Y  ++ ++ QK++ R Q+    P  P  DQ EK + YK  L+R++     PK
Sbjct: 784  KMQTMKENYLPDMNEMCQKISLRLQQHDSNPQQPKSDQIEKLRAYKMMLERMIAILQIPK 843

Query: 165  NAIPANFKEEHVEALEKRVQNILNSFRPKPS 257
            N+I  +F+E+ + + EK++ N++NS RP+ S
Sbjct: 844  NSILPSFREK-LGSYEKQIVNLINSIRPRRS 873


>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Cicer arietinum]
          Length = 1313

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
 Frame = +1

Query: 424  VPQEQKHV----TPFQQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQ 591
            V Q Q H     T  Q  N+Q  V++MQ N +  +Q++++     S    +QQ +   MQ
Sbjct: 675  VTQVQSHENQMNTQLQTTNMQGPVATMQQNNMTSMQHNSL-----SGLSTTQQNMMNTMQ 729

Query: 592  SQAALNTQGANVNSLQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQGSN 750
            S A L++   N+NSLQQ   + +  NP+   Q  N SSL  Q G+N +Q ++Q GS+
Sbjct: 730  SSANLDSAQGNMNSLQQVPVSSLQQNPVTAPQQTNASSLSSQAGVNVIQPNLQPGSS 786


>ref|XP_004173720.1| PREDICTED: uncharacterized LOC101220890, partial [Cucumis sativus]
          Length = 611

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
 Frame = +1

Query: 424 VPQEQKHVTPFQQ-----------MNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQ 570
           + Q Q  +TP Q             N+Q SV+ +Q N ++ +Q++++   Q  SG A+QQ
Sbjct: 106 IQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMSSMQHNSL---QTFSGSAAQQ 162

Query: 571 TVQTPMQSQAALNT-QGANVNSLQQSSANQIPHNPL----QHNNISSLQQRGINSMQSSV 735
            +  PMQ  ++L + QG +++SLQQ +A  +  NP     + NN S   Q  +N++Q ++
Sbjct: 163 NMTIPMQPGSSLESGQGNSLSSLQQVAAGSLQQNPANSSQRSNNGSLPSQNVVNTLQPNM 222

Query: 736 QQGSNNPH 759
               +NP+
Sbjct: 223 NSLQSNPN 230


>ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus]
          Length = 1345

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
 Frame = +1

Query: 424  VPQEQKHVTPFQQ-----------MNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQ 570
            + Q Q  +TP Q             N+Q SV+ +Q N ++ +Q++++   Q  SG A+QQ
Sbjct: 675  IQQSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMSSMQHNSL---QTFSGSAAQQ 731

Query: 571  TVQTPMQSQAALNT-QGANVNSLQQSSANQIPHNPL----QHNNISSLQQRGINSMQSSV 735
             +  PMQ  ++L + QG +++SLQQ +A  +  NP     + NN S   Q  +N++Q ++
Sbjct: 732  NMTIPMQPGSSLESGQGNSLSSLQQVAAGSLQQNPANSSQRSNNGSLPSQNVVNTLQPNM 791

Query: 736  QQGSNNPH 759
                +NP+
Sbjct: 792  NSLQSNPN 799


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
 Frame = +1

Query: 427  PQEQKHVTPFQQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAAL 606
            P E +     Q MNLQ SV++MQ N V  LQ S++  +  S    +QQ +   +QS A L
Sbjct: 1013 PHENQMNPQLQPMNLQGSVATMQQNNVPSLQPSSMPSL--SGLPNAQQNIMNSLQSSANL 1070

Query: 607  NT-QGANVNSLQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQ 741
            ++ QG  + SLQQ++   +  NP+   Q  NI++L  Q G+N +Q ++ Q
Sbjct: 1071 DSGQGNALTSLQQAAVGALQQNPVSAPQQANINNLSSQNGVNVLQQNINQ 1120


>emb|CBI29079.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
 Frame = +1

Query: 427 PQEQKHVTPFQQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAAL 606
           P E +     Q MNLQ SV++MQ N V  LQ S++  +  S    +QQ +   +QS A L
Sbjct: 174 PHENQMNPQLQPMNLQGSVATMQQNNVPSLQPSSMPSL--SGLPNAQQNIMNSLQSSANL 231

Query: 607 NT-QGANVNSLQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQ 741
           ++ QG  + SLQQ++   +  NP+   Q  NI++L  Q G+N +Q ++ Q
Sbjct: 232 DSGQGNALTSLQQAAVGALQQNPVSAPQQANINNLSSQNGVNVLQQNINQ 281


>ref|XP_006597111.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X3 [Glycine max]
          Length = 1170

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
 Frame = +3

Query: 3   RLQAMKDLYFVELKDLFQKLNYRCQK----PMPP--DQSEKFKHYKAQLQRVLNYFNAPK 164
           ++++MK+ Y  EL +++QK+  + Q+    P  P  DQ EK K +K  L+R++ +    K
Sbjct: 558 KIKSMKESYLPELNEMYQKIASKLQQHDSLPQQPKSDQLEKLKVFKMMLERIITFLQVSK 617

Query: 165 NAIPANFKEEHVEALEKRVQNILNSFRPK 251
           + I  NFKE+ + + EK++ N +N+ RP+
Sbjct: 618 SNISPNFKEK-LNSYEKQIINFINTNRPR 645