BLASTX nr result

ID: Ephedra28_contig00004289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004289
         (543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844936.1| hypothetical protein AMTR_s00058p00159400 [A...    58   2e-06
ref|XP_002267667.1| PREDICTED: polyamine oxidase [Vitis vinifera...    57   3e-06
dbj|BAJ98538.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   4e-06
emb|CBI28518.3| unnamed protein product [Vitis vinifera]               57   4e-06

>ref|XP_006844936.1| hypothetical protein AMTR_s00058p00159400 [Amborella trichopoda]
           gi|548847427|gb|ERN06611.1| hypothetical protein
           AMTR_s00058p00159400 [Amborella trichopoda]
          Length = 489

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +2

Query: 2   TGEHTSQQENGYVHGAYLEGISSGKTVIDCVKNGVC 109
           TGEHTS+  NGYVHGAYL GI S + ++DC+K G C
Sbjct: 444 TGEHTSEHYNGYVHGAYLSGIDSAQMLVDCIKKGNC 479


>ref|XP_002267667.1| PREDICTED: polyamine oxidase [Vitis vinifera]
           gi|297739028|emb|CBI28517.3| unnamed protein product
           [Vitis vinifera]
          Length = 495

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 26/36 (72%)
 Frame = +2

Query: 2   TGEHTSQQENGYVHGAYLEGISSGKTVIDCVKNGVC 109
           TGEHTSQ  NGYVHGAYL GI S   +I C+K G C
Sbjct: 451 TGEHTSQHYNGYVHGAYLAGIDSANILIPCIKKGAC 486


>dbj|BAJ98538.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +2

Query: 2   TGEHTSQQENGYVHGAYLEGISSGKTVIDCVKNGVCPRSLSMMHE 136
           TGEHTS++ NGYVHGAYL GI S   +I+C KN +C   +   H+
Sbjct: 454 TGEHTSEKYNGYVHGAYLAGIDSADILINCAKNKMCKYDVKGKHD 498


>emb|CBI28518.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = +2

Query: 2   TGEHTSQQENGYVHGAYLEGISSGKTVIDCVKNGVCPRSL 121
           TGEHTS+  NGYVHGAYL GI S K +I CVK+G C  S+
Sbjct: 461 TGEHTSEYFNGYVHGAYLAGIDSAKMLIRCVKHGDCCYSI 500


Top