BLASTX nr result
ID: Ephedra28_contig00004276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00004276
(1440 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26002.3| unnamed protein product [Vitis vinifera] 353 8e-95
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi... 353 8e-95
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera] 353 8e-95
gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [... 351 5e-94
ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containi... 348 3e-93
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi... 348 3e-93
gb|EXB80291.1| hypothetical protein L484_025147 [Morus notabilis] 347 6e-93
ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containi... 345 2e-92
gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily p... 345 2e-92
gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indi... 344 5e-92
ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group] g... 344 5e-92
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi... 344 6e-92
ref|XP_006647081.1| PREDICTED: pentatricopeptide repeat-containi... 343 1e-91
ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [S... 343 1e-91
ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|309... 342 2e-91
gb|ACG30078.1| PPR2 [Zea mays] 342 3e-91
ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containi... 341 5e-91
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,... 341 5e-91
ref|XP_006407947.1| hypothetical protein EUTSA_v10020626mg [Eutr... 340 9e-91
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar... 339 1e-90
>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 353 bits (907), Expect = 8e-95
Identities = 167/325 (51%), Positives = 227/325 (69%), Gaps = 4/325 (1%)
Frame = +3
Query: 477 EGSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 644
EG +PI +KK +++ A T+ E L + K W QAL++F+MLR+QP YQP
Sbjct: 83 EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQP 142
Query: 645 NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLF 824
GTY +LL LLG+ QP H +F+TM E+GCEP +E TA++++Y R+ +D AFS+
Sbjct: 143 KEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSIL 202
Query: 825 QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 1004
+MK+ P CQPDVFTYS L++ C++AS+F+ V L EEM I PNTVT+NI++ GYGK
Sbjct: 203 NQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGK 262
Query: 1005 AGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIR 1184
AG+F EME VLS ML S S PD+WTMN ++ +FGN+G++E ME+WYEKF +GIEP+ R
Sbjct: 263 AGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETR 322
Query: 1185 TFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1364
TF ILI +YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM
Sbjct: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQM 382
Query: 1365 ILDGVKPDSATCCSLINAYAEANMF 1439
+G+K D+ T C LI YA A +F
Sbjct: 383 RAEGMKADTKTFCCLIRGYANAGLF 407
Score = 106 bits (264), Expect = 3e-20
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+A + ++ P+ QP++ TY LL ++ E V S++ M P++ V
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G D + M + S +PDV+T + ++ + + + + E+ G
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
I P T T NILI YGK + +M +V+ M + P WT NNVI F + G+
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEAFSDVGDA 372
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDK------MASVMEYMHKTSLPWTT 1286
+ ME +++ G++ D +TF LI Y A L+ K M V M +
Sbjct: 373 KNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKDKHCQPDS 432
Query: 1287 ATYNVVIHAFKNTG---EIKQIDPVFNQMILDGVKPD 1388
TY++++ A+K G +I ++ +M+ DG K D
Sbjct: 433 TTYSIMVEAYKKEGMNDKIYDLEQERQRMVADGPKGD 469
>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 353 bits (907), Expect = 8e-95
Identities = 167/325 (51%), Positives = 227/325 (69%), Gaps = 4/325 (1%)
Frame = +3
Query: 477 EGSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 644
EG +PI +KK +++ A T+ E L + K W QAL++F+MLR+QP YQP
Sbjct: 83 EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQP 142
Query: 645 NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLF 824
GTY +LL LLG+ QP H +F+TM E+GCEP +E TA++++Y R+ +D AFS+
Sbjct: 143 KEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSIL 202
Query: 825 QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 1004
+MK+ P CQPDVFTYS L++ C++AS+F+ V L EEM I PNTVT+NI++ GYGK
Sbjct: 203 NQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGK 262
Query: 1005 AGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIR 1184
AG+F EME VLS ML S S PD+WTMN ++ +FGN+G++E ME+WYEKF +GIEP+ R
Sbjct: 263 AGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETR 322
Query: 1185 TFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1364
TF ILI +YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM
Sbjct: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQM 382
Query: 1365 ILDGVKPDSATCCSLINAYAEANMF 1439
+G+K D+ T C LI YA A +F
Sbjct: 383 RAEGMKADTKTFCCLIRGYANAGLF 407
Score = 126 bits (317), Expect = 2e-26
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+A + ++ P+ QP++ TY LL ++ E V S++ M P++ V
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G D + M + S +PDV+T + ++ + + + + E+ G
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
I P T T NILI YGK + +M +V+ M + P WT NNVI F + G+
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEAFSDVGDA 372
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVV 1304
+ ME +++ G++ D +TF LI Y A L+ K+ S ++ K +P T+ YN V
Sbjct: 373 KNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAV 432
Query: 1305 IHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
I A ++ +++ VFN+M +PDS T ++ AY + M
Sbjct: 433 ISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476
Score = 73.2 bits (178), Expect = 3e-10
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Frame = +3
Query: 525 IKRHTAMTLEETLIHHIYTK--NWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQP 698
++ T T+ + ++ Y K + + K+ + + +P++ T +LSL G Q
Sbjct: 243 VRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQI 302
Query: 699 EHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSI 878
E + + + G EP++ +I AY + D S+ + M+ TY+
Sbjct: 303 EIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNN 361
Query: 879 LIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSE 1058
+I+ + K + ++M A G+ +T T LIRGY AG F ++ V S L +
Sbjct: 362 VIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKV--VSSVQLAGK 419
Query: 1059 SCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDK 1235
IP+ + N VI +L MER + + + +PD T+ I++ +Y + + DK
Sbjct: 420 FEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDK 479
Query: 1236 M 1238
+
Sbjct: 480 I 480
>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 353 bits (907), Expect = 8e-95
Identities = 167/325 (51%), Positives = 227/325 (69%), Gaps = 4/325 (1%)
Frame = +3
Query: 477 EGSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 644
EG +PI +KK +++ A T+ E L + K W QAL++F+MLR+QP YQP
Sbjct: 83 EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQP 142
Query: 645 NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLF 824
GTY +LL LLG+ QP H +F+TM E+GCEP +E TA++++Y R+ +D AFS+
Sbjct: 143 KEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSIL 202
Query: 825 QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 1004
+MK+ P CQPDVFTYS L++ C++AS+F+ V L EEM I PNTVT+NI++ GYGK
Sbjct: 203 NQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGK 262
Query: 1005 AGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIR 1184
AG+F EME VLS ML S S PD+WTMN ++ +FGN+G++E ME+WYEKF +GIEP+ R
Sbjct: 263 AGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETR 322
Query: 1185 TFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1364
TF ILI +YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM
Sbjct: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQM 382
Query: 1365 ILDGVKPDSATCCSLINAYAEANMF 1439
+G+K D+ T C LI YA A +F
Sbjct: 383 RAEGMKADTKTFCCLIRGYANAGLF 407
Score = 126 bits (317), Expect = 2e-26
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+A + ++ P+ QP++ TY LL ++ E V S++ M P++ V
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G D + M + S +PDV+T + ++ + + + + E+ G
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
I P T T NILI YGK + +M +V+ M + P WT NNVI F + G+
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEAFSDVGDA 372
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVV 1304
+ ME +++ G++ D +TF LI Y A L+ K+ S ++ K +P T+ YN V
Sbjct: 373 KNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAV 432
Query: 1305 IHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
I A ++ +++ VFN+M +PDS T ++ AY + M
Sbjct: 433 ISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476
Score = 73.2 bits (178), Expect = 3e-10
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Frame = +3
Query: 525 IKRHTAMTLEETLIHHIYTK--NWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQP 698
++ T T+ + ++ Y K + + K+ + + +P++ T +LSL G Q
Sbjct: 243 VRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQI 302
Query: 699 EHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSI 878
E + + + G EP++ +I AY + D S+ + M+ TY+
Sbjct: 303 EIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNN 361
Query: 879 LIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSE 1058
+I+ + K + ++M A G+ +T T LIRGY AG F ++ V S L +
Sbjct: 362 VIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKV--VSSVQLAGK 419
Query: 1059 SCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDK 1235
IP+ + N VI +L MER + + + +PD T+ I++ +Y + + DK
Sbjct: 420 FEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDK 479
Query: 1236 M 1238
+
Sbjct: 480 I 480
>gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [Prunus persica]
Length = 485
Score = 351 bits (900), Expect = 5e-94
Identities = 169/324 (52%), Positives = 225/324 (69%), Gaps = 4/324 (1%)
Frame = +3
Query: 480 GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 647
G+ +P+ VKK +++ A T+ E L I K W QAL++F MLR+QP YQP
Sbjct: 79 GTYRRAPLKNVKKKLDRKNNAKAWANTVTEALSDAIDKKQWLQALEVFDMLREQPFYQPK 138
Query: 648 IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQ 827
GTY +LL LLGR QP +F+ M E+GCEP E TA+++AY RN +D AFS+
Sbjct: 139 EGTYMKLLGLLGRCGQPHRARQLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLN 198
Query: 828 EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 1007
+MK+ P CQPDVFTYS LI+ C++A KF+ V L EEM+ I PNTVT+NI++ GYGKA
Sbjct: 199 QMKTLPHCQPDVFTYSTLIKVCIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKA 258
Query: 1008 GRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRT 1187
G++ +ME VLS ML +C PD+WTMN ++ VFGN+G+++ MERWYEKF +GIEP+ RT
Sbjct: 259 GKYDQMEKVLSGMLEGATCKPDVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRT 318
Query: 1188 FEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1367
F ILI +YG+ +LYDKM++VMEYM K PWTTATYN VI AF + G+ K ++ F+QM
Sbjct: 319 FNILIGAYGKKKLYDKMSTVMEYMRKLQFPWTTATYNNVIEAFADVGDAKNMEYTFDQMR 378
Query: 1368 LDGVKPDSATCCSLINAYAEANMF 1439
+G+K D+ T C LIN YA A +F
Sbjct: 379 AEGMKADTKTFCCLINGYANAGLF 402
Score = 125 bits (315), Expect = 3e-26
Identities = 88/316 (27%), Positives = 148/316 (46%), Gaps = 6/316 (1%)
Frame = +3
Query: 507 QVKKAAIKRHTAMTLE-ETLIHHIYTKN--WQQALKLFKMLRQQPQYQPNIGTYRQLLSL 677
Q+ A ++ TLE T + Y +N +A + ++ P QP++ TY L+ +
Sbjct: 160 QLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLNQMKTLPHCQPDVFTYSTLIKV 219
Query: 678 LGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQP 857
+ E V S++ M E P++ V+S Y + G D + M +C+P
Sbjct: 220 CIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKP 279
Query: 858 DVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVL 1037
DV+T ++++ + + E+ GI P T T NILI YGK + +M V+
Sbjct: 280 DVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVM 339
Query: 1038 SEMLTSESCIPDIWTM---NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISS 1208
M + P WT NNVI F + G+ + ME +++ G++ D +TF LI+
Sbjct: 340 EYMRKLQ--FP--WTTATYNNVIEAFADVGDAKNMEYTFDQMRAEGMKADTKTFCCLING 395
Query: 1209 YGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPD 1388
Y A L+ K+ S ++ K +P T YN VI A ++ +++ VF +M PD
Sbjct: 396 YANAGLFHKVVSSVQLAGKFEIPENTTFYNAVIAACAKAEDLMEMERVFKRMKEKQCPPD 455
Query: 1389 SATCCSLINAYAEANM 1436
S T ++ AY++ M
Sbjct: 456 STTYSLMVEAYSKEGM 471
Score = 69.7 bits (169), Expect = 3e-09
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Frame = +3
Query: 537 TAMTLEETLIHHIYTK--NWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVH 710
T T+ + ++ Y K + Q K+ + + +P++ T +LS+ G Q + +
Sbjct: 242 TPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKPDVWTMNVILSVFGNKGQIDMME 301
Query: 711 SVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQH 890
+ ++ G EP++ +I AY + D ++ + M+ TY+ +I+
Sbjct: 302 RWYEKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVMEYMRKLQFPWTTA-TYNNVIEA 360
Query: 891 CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIP 1070
+ K + ++M A G+ +T T LI GY AG F ++ V S L + IP
Sbjct: 361 FADVGDAKNMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKV--VSSVQLAGKFEIP 418
Query: 1071 DIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
+ T N VI +L MER +++ + PD T+ +++ +Y + + DK+
Sbjct: 419 ENTTFYNAVIAACAKAEDLMEMERVFKRMKEKQCPPDSTTYSLMVEAYSKEGMNDKI 475
>ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cicer arietinum]
Length = 499
Score = 348 bits (893), Expect = 3e-93
Identities = 168/324 (51%), Positives = 223/324 (68%), Gaps = 4/324 (1%)
Frame = +3
Query: 480 GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 647
GS SPI +KK +++ A T+ E L I K W QAL+ F MLR+Q YQP
Sbjct: 77 GSTKRSPIKNLKKKLDRKNDAKAWVNTVTEALSECIDKKQWLQALQTFDMLREQSFYQPR 136
Query: 648 IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQ 827
GTY +L+ LLGR +QP +F TM E+GC+P E TA+++AY R+ +D A S+
Sbjct: 137 EGTYMKLIVLLGRSSQPHRARQLFTTMIEEGCDPTPELYTALLAAYCRSNMIDEALSILN 196
Query: 828 EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 1007
EMK++P CQPDVFTYS LI+ C++A KF+ V + EEM+ I+PNTVT+NI++ GYGKA
Sbjct: 197 EMKNHPLCQPDVFTYSTLIKVCVDAFKFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKA 256
Query: 1008 GRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRT 1187
G F +ME VLS ML S SC PD+WTMN +I VFGN G+++ ME+WYEKF +GIEP+ RT
Sbjct: 257 GMFDQMEKVLSSMLQSTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 316
Query: 1188 FEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1367
F ILI +YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ FNQM
Sbjct: 317 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIDAFADAGDAKNMEYTFNQMR 376
Query: 1368 LDGVKPDSATCCSLINAYAEANMF 1439
+G++ D+ T C LIN +A A +F
Sbjct: 377 SEGMRADTKTFCCLINGFANAGLF 400
Score = 65.5 bits (158), Expect = 5e-08
Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 70/285 (24%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+AL + ++ P QP++ TY L+ + + E V ++ M + P++ V
Sbjct: 190 EALSILNEMKNHPLCQPDVFTYSTLIKVCVDAFKFELVELMYEEMAQRSIMPNTVTQNIV 249
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G D + M + SC+PDV+T + +I + + + E+ G
Sbjct: 250 LSGYGKAGMFDQMEKVLSSMLQSTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 309
Query: 954 ILPNTVTKNILIRGYGK-----------------------------------AGRFQEME 1028
I P T T NILI YGK AG + ME
Sbjct: 310 IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIDAFADAGDAKNME 369
Query: 1029 NVLSEMLTSESCIPDIWTMNNVIRVFGNRG-------------ELET------------- 1130
++M SE D T +I F N G +LET
Sbjct: 370 YTFNQM-RSEGMRADTKTFCCLINGFANAGLFHKVISSVHLAAKLETPENTAFYNAVLSA 428
Query: 1131 ---------MERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
MER +++ + +PD T+ I++ +Y + + DK+
Sbjct: 429 CAKAEDLMEMERVFKRMKDNQCQPDNTTYSIMVKAYRKQGMSDKI 473
>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 348 bits (893), Expect = 3e-93
Identities = 167/319 (52%), Positives = 222/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ +KK K++ A T+ E+L I+ K+W QAL++F MLR+Q YQP GTY
Sbjct: 71 TPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTYM 130
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+L+ LLG+ QP H +F TM E+G EP E TA+++AY R+ +D AFS+ EMK
Sbjct: 131 KLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKL 190
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDVFTYS LI+ C++A KF V L EEM+ I+PNTVT+NI++ GYGKAG F +
Sbjct: 191 PRCQPDVFTYSTLIKVCVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQ 250
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S +C PD+WTMN +I VFGN G+++ ME+WYEKF +GIEP+ RTF ILI
Sbjct: 251 MEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILI 310
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM +G+K
Sbjct: 311 GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMK 370
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 371 ADTKTLCCLINGYANAGLF 389
Score = 68.2 bits (165), Expect = 8e-09
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Frame = +3
Query: 588 WQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCT 767
+ Q K+ + +P++ T ++S+ G Q + + + + G EP++
Sbjct: 248 FDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFN 307
Query: 768 AVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSA 947
+I AY + D S+ + M+ TY+ +I+ +A K + ++M A
Sbjct: 308 ILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRA 366
Query: 948 MGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGEL 1124
G+ +T T LI GY AG F ++ + S L + IP+ T N V+ +L
Sbjct: 367 EGMKADTKTLCCLINGYANAGLFHKV--ISSVRLAGKLEIPENITFYNAVLSACAKAEDL 424
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
MER +++ + +PD T+ I+I +Y + + DK+
Sbjct: 425 MEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKI 462
>gb|EXB80291.1| hypothetical protein L484_025147 [Morus notabilis]
Length = 509
Score = 347 bits (891), Expect = 6e-93
Identities = 167/319 (52%), Positives = 222/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+PI VKK +++ A T+ ETL I K W QAL++F MLR+QP YQP GTY
Sbjct: 88 TPIKNVKKKLDRKNKAKAWVNTVTETLFERIQNKQWLQALEVFHMLREQPFYQPKEGTYI 147
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP +F+TM E+ +P SE TA++SAY RNG ++ AFS F +MK+
Sbjct: 148 KLLVLLGRSGQPHQARQLFDTMVEEELDPSSELYTALLSAYCRNGLIEEAFSTFDKMKTL 207
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P+CQPDVFTYS LI+ C++A +F V L +EM I PNTVT+NI++ GYG+AG+F E
Sbjct: 208 PNCQPDVFTYSTLIKACVDALQFDLVESLYKEMDERQITPNTVTQNIVLSGYGRAGKFDE 267
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S +C PD+WTMN ++ VFGN G+++ ME+WYEKF +GIEP+ RTF ILI
Sbjct: 268 MEKVLSGMLESTTCKPDVWTMNIILSVFGNMGQIDMMEKWYEKFRDFGIEPETRTFNILI 327
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VMEYM K PWTT+TYN VI AF + G+ K ++ F QM +G++
Sbjct: 328 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKHMECTFEQMRTEGMR 387
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 388 ADTKTFCCLINGYANAGLF 406
Score = 127 bits (320), Expect = 9e-27
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Frame = +3
Query: 591 QQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTA 770
++A F ++ P QP++ TY L+ Q + V S++ M E P++
Sbjct: 195 EEAFSTFDKMKTLPNCQPDVFTYSTLIKACVDALQFDLVESLYKEMDERQITPNTVTQNI 254
Query: 771 VISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAM 950
V+S Y R G D + M + +C+PDV+T +I++ + + + E+
Sbjct: 255 VLSGYGRAGKFDEMEKVLSGMLESTTCKPDVWTMNIILSVFGNMGQIDMMEKWYEKFRDF 314
Query: 951 GILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGE 1121
GI P T T NILI YGK + +M V+ M + P WT NNVI F + G+
Sbjct: 315 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ--FP--WTTSTYNNVIEAFADVGD 370
Query: 1122 LETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNV 1301
+ ME +E+ T G+ D +TF LI+ Y A L+ K+ S ++ K +P T+ YN
Sbjct: 371 AKHMECTFEQMRTEGMRADTKTFCCLINGYANAGLFHKVISSVQLAGKFEIPENTSFYNS 430
Query: 1302 VIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
VI A ++ +++ VF +M P+S T ++ AY + M
Sbjct: 431 VISACAKAEDLIEMERVFKRMKDKKCLPNSTTYSIMVEAYRKEGM 475
Score = 63.5 bits (153), Expect = 2e-07
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Frame = +3
Query: 603 KLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISA 782
K+ + + +P++ T +LS+ G Q + + + ++ G EP++ +I A
Sbjct: 270 KVLSGMLESTTCKPDVWTMNIILSVFGNMGQIDMMEKWYEKFRDFGIEPETRTFNILIGA 329
Query: 783 YARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILP 962
Y + D ++ + M+ TY+ +I+ + K + E+M G+
Sbjct: 330 YGKKRMYDKMSTVMEYMRKL-QFPWTTSTYNNVIEAFADVGDAKHMECTFEQMRTEGMRA 388
Query: 963 NTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM-NNVIRVFGNRGELETMER 1139
+T T LI GY AG F ++ + S L + IP+ + N+VI +L MER
Sbjct: 389 DTKTFCCLINGYANAGLFHKV--ISSVQLAGKFEIPENTSFYNSVISACAKAEDLIEMER 446
Query: 1140 WYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
+++ + P+ T+ I++ +Y + + DK+
Sbjct: 447 VFKRMKDKKCLPNSTTYSIMVEAYRKEGMNDKI 479
>ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like isoform X1 [Setaria italica]
Length = 571
Score = 345 bits (886), Expect = 2e-92
Identities = 160/325 (49%), Positives = 227/325 (69%), Gaps = 4/325 (1%)
Frame = +3
Query: 477 EGSVVSSPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 644
+ +PI VKK A + A T+ E L I +KNW++AL++F+ML++QP Y P
Sbjct: 156 DSKAARTPIKNVKKRLDARADAKAWACTVTEALADRINSKNWKEALQVFEMLKEQPFYHP 215
Query: 645 NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLF 824
GTY +L+ LLGR Q H +FN M + GC+P E TA+I AY R+G +D+A L
Sbjct: 216 KEGTYMKLIVLLGRSGQAAQAHQLFNEMLQQGCQPTPELYTALIGAYCRSGLMDDALQLL 275
Query: 825 QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 1004
+MKS+P CQPDV+TYS +I+ C++A++F + + ++M+ I PNTVT+NI++ GYGK
Sbjct: 276 TDMKSSPLCQPDVYTYSTIIKACVDATRFDLIDAMYKDMAERLISPNTVTQNIVLSGYGK 335
Query: 1005 AGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIR 1184
AGR +ME VLS+ML S +C PD+WTMN ++ +FGN G++E+ME+WYEKF +YGIEP+ R
Sbjct: 336 AGRLDDMERVLSDMLDSTTCKPDVWTMNIILSLFGNMGQIESMEKWYEKFRSYGIEPETR 395
Query: 1185 TFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1364
T ILI +YG+ +YDKM++VMEYM K + PWTTATYN VI AF G+ K ++ FNQM
Sbjct: 396 TLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQM 455
Query: 1365 ILDGVKPDSATCCSLINAYAEANMF 1439
+G+KPD+ T C LIN +++A +F
Sbjct: 456 RSEGMKPDTKTFCCLINGFSKAGLF 480
Score = 127 bits (320), Expect = 9e-27
Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
AL+L ++ P QP++ TY ++ + + + +++ M E P++ V+
Sbjct: 271 ALQLLTDMKSSPLCQPDVYTYSTIIKACVDATRFDLIDAMYKDMAERLISPNTVTQNIVL 330
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y + G LD+ + +M + +C+PDV+T +I++ + + + + E+ + GI
Sbjct: 331 SGYGKAGRLDDMERVLSDMLDSTTCKPDVWTMNIILSLFGNMGQIESMEKWYEKFRSYGI 390
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGELE 1127
P T T NILI YGK + +M V+ M + P WT NNVI F G+ +
Sbjct: 391 EPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATYNNVIEAFAEAGDAK 446
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME + + + G++PD +TF LI+ + +A L+ K+ +++ + +P T+ +N ++
Sbjct: 447 NMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERLDVPANTSFHNAIL 506
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ VF M PD+ T L+ AY + M
Sbjct: 507 EACAKADDLMEMERVFMHMKHKQCDPDAMTYSILVEAYRKEGM 549
Score = 71.2 bits (173), Expect = 1e-09
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +3
Query: 639 QPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFS 818
+P++ T +LSL G Q E + + + G EP++ +I AY + D +
Sbjct: 356 KPDVWTMNIILSLFGNMGQIESMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSA 415
Query: 819 LFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGY 998
+ + M+ + TY+ +I+ EA K + +M + G+ P+T T LI G+
Sbjct: 416 VMEYMRKL-AFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGF 474
Query: 999 GKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEP 1175
KAG F ++ ++ L +P + +N ++ +L MER + + +P
Sbjct: 475 SKAGLFHKVVGMVK--LAERLDVPANTSFHNAILEACAKADDLMEMERVFMHMKHKQCDP 532
Query: 1176 DIRTFEILISSYGQAELYDKM 1238
D T+ IL+ +Y + + DK+
Sbjct: 533 DAMTYSILVEAYRKEGMTDKI 553
>gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 491
Score = 345 bits (886), Expect = 2e-92
Identities = 166/324 (51%), Positives = 224/324 (69%), Gaps = 4/324 (1%)
Frame = +3
Query: 480 GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 647
GS +P+ +KK +++ A T+ ETL I K W QAL++F+MLR QP YQP
Sbjct: 77 GSSKKTPLKNLKKKLDRKNNAKAWVCTVTETLSDCILKKQWLQALQVFEMLRDQPFYQPK 136
Query: 648 IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQ 827
GTY +LL LLG+ QP +F+ M ++GCEP E TA+++AY RN +D+AF+
Sbjct: 137 EGTYMKLLVLLGKSGQPHRARQLFHDMVQEGCEPTPELFTALLAAYCRNNLIDDAFATLN 196
Query: 828 EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 1007
+MK+ P CQPDVFTYS LI+ C++AS+F V L EM I PNTVT+NI++ GYGKA
Sbjct: 197 QMKTLPCCQPDVFTYSTLIKACVDASRFDLVESLYGEMEERLITPNTVTQNIVLSGYGKA 256
Query: 1008 GRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRT 1187
G+F++ME VLS ML S + PD+WTMN ++ VFGN+G+++ MERWYEKF +GIEP+ RT
Sbjct: 257 GKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMMERWYEKFRNFGIEPETRT 316
Query: 1188 FEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1367
F ILI +YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM
Sbjct: 317 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKHMEYTFDQMR 376
Query: 1368 LDGVKPDSATCCSLINAYAEANMF 1439
+G+K D+ T C LIN YA A +F
Sbjct: 377 AEGMKADTKTFCCLINGYANAGLF 400
Score = 117 bits (292), Expect = 2e-23
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A ++ P QP++ TY L+ ++ + V S++ M+E P++ V+
Sbjct: 191 AFATLNQMKTLPCCQPDVFTYSTLIKACVDASRFDLVESLYGEMEERLITPNTVTQNIVL 250
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y + G + + M + + +PDV+T +I++ + + E+ GI
Sbjct: 251 SGYGKAGKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMMERWYEKFRNFGI 310
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGELE 1127
P T T NILI YGK + +M +V+ M + P WT NNVI F + G+ +
Sbjct: 311 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEAFADVGDAK 366
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME +++ G++ D +TF LI+ Y A L+ K+ S ++ K +P T+ YN VI
Sbjct: 367 HMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKLEIPENTSFYNAVI 426
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ VF +M +P+S T ++ AY + M
Sbjct: 427 SACAKAEDLMEMERVFKRMKDKQCQPNSMTFSIMVEAYRKEGM 469
Score = 72.8 bits (177), Expect = 3e-10
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Frame = +3
Query: 537 TAMTLEETLIHHIYTK--NWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVH 710
T T+ + ++ Y K ++Q K+ + + +P++ T +LS+ G Q + +
Sbjct: 240 TPNTVTQNIVLSGYGKAGKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMME 299
Query: 711 SVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQH 890
+ + G EP++ +I AY + D S+ + M+ TY+ +I+
Sbjct: 300 RWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNNVIEA 358
Query: 891 CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIP 1070
+ K + ++M A G+ +T T LI GY AG F ++ + S L ++ IP
Sbjct: 359 FADVGDAKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKV--ISSVQLAAKLEIP 416
Query: 1071 DIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASV 1247
+ + N VI +L MER +++ + +P+ TF I++ +Y + + DK+ +
Sbjct: 417 ENTSFYNAVISACAKAEDLMEMERVFKRMKDKQCQPNSMTFSIMVEAYRKEGMNDKIYDL 476
Query: 1248 ----MEYMHKTSLP 1277
E+++ SLP
Sbjct: 477 EQLKQEFLNNGSLP 490
>gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
Length = 588
Score = 344 bits (883), Expect = 5e-92
Identities = 163/319 (51%), Positives = 224/319 (70%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
SPI VKK A + A T+ E L I KNWQ+AL++F+ML++QP Y P GT+
Sbjct: 92 SPIKNVKKRLDARAEAKAWACTVTEALADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFM 151
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP +F+ M + GC+P E TA+I+AY RNG LD+AF L +MK++
Sbjct: 152 KLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKAS 211
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++AS+F V + ++M+ I PNTVT+NI++ GYG+AGR +
Sbjct: 212 PVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDD 271
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S + PD+WTMN ++ +FGNRG++E+ME+WYEKF YGIEP+ RT ILI
Sbjct: 272 MEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILI 331
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VMEYM K + PWTTAT+N VI AF + G+ K ++ FNQM +G+K
Sbjct: 332 GAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMK 391
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LIN + A +F
Sbjct: 392 PDTKTFCCLINGFGNAGLF 410
Score = 124 bits (311), Expect = 1e-25
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A +L ++ P QP++ TY ++ ++ + V +++ M + P++ V+
Sbjct: 201 AFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVL 260
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y R G LD+ + M + + +PDV+T +I++ + + + + E+ GI
Sbjct: 261 SGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGI 320
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWT---MNNVIRVFGNRGELE 1127
P T T NILI YGK + +M V+ M + P WT NNVI F + G+ +
Sbjct: 321 EPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATFNNVIEAFADAGDAK 376
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME + + G++PD +TF LI+ +G A L+ K+ +++ + +P T +N V+
Sbjct: 377 NMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVL 436
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ VF +M PD+ T L+ AY + M
Sbjct: 437 MACVKAEDLMEMERVFMRMKQIQCVPDATTYSILVGAYRKEGM 479
>ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|108707769|gb|ABF95564.1| PPR2, putative, expressed
[Oryza sativa Japonica Group] gi|108707770|gb|ABF95565.1|
PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707771|gb|ABF95566.1| PPR2, putative, expressed
[Oryza sativa Japonica Group]
gi|113548384|dbj|BAF11827.1| Os03g0309800 [Oryza sativa
Japonica Group] gi|125586018|gb|EAZ26682.1| hypothetical
protein OsJ_10586 [Oryza sativa Japonica Group]
gi|215686360|dbj|BAG87621.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215741099|dbj|BAG97594.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767065|dbj|BAG99293.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767110|dbj|BAG99338.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 501
Score = 344 bits (883), Expect = 5e-92
Identities = 163/319 (51%), Positives = 224/319 (70%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
SPI VKK A + A T+ E L I KNWQ+AL++F+ML++QP Y P GT+
Sbjct: 92 SPIKNVKKRLDARAEAKAWACTVTEALADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFM 151
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP +F+ M + GC+P E TA+I+AY RNG LD+AF L +MK++
Sbjct: 152 KLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKAS 211
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++AS+F V + ++M+ I PNTVT+NI++ GYG+AGR +
Sbjct: 212 PVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDD 271
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S + PD+WTMN ++ +FGNRG++E+ME+WYEKF YGIEP+ RT ILI
Sbjct: 272 MEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILI 331
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VMEYM K + PWTTAT+N VI AF + G+ K ++ FNQM +G+K
Sbjct: 332 GAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMK 391
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LIN + A +F
Sbjct: 392 PDTKTFCCLINGFGNAGLF 410
Score = 122 bits (306), Expect = 4e-25
Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A +L ++ P QP++ TY ++ ++ + V +++ M + P++ V+
Sbjct: 201 AFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVL 260
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y R G LD+ + M + + +PDV+T +I++ + + + + E+ GI
Sbjct: 261 SGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGI 320
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWT---MNNVIRVFGNRGELE 1127
P T T NILI YGK + +M V+ M + P WT NNVI F + G+ +
Sbjct: 321 EPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATFNNVIEAFADAGDAK 376
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME + + G++PD +TF LI+ +G A L+ K+ +++ + +P T +N V+
Sbjct: 377 NMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVL 436
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
++ +++ VF +M PD+ T L+ AY + M
Sbjct: 437 MTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEGM 479
>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 344 bits (882), Expect = 6e-92
Identities = 164/319 (51%), Positives = 222/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ +VKK +++ A T+ E L HI K W QAL++F+MLR+QP Y+P GTY
Sbjct: 87 APLKRVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYM 146
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP +F+TM ++ CEP E TA+++AY RN +D+AFS MK+
Sbjct: 147 KLLVLLGRSGQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTL 206
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYSILI+ C++ S+F+ V L EEM+ I PNTVT+NI++ GYGK G++ +
Sbjct: 207 PRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQ 266
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VL ML S +C PD+WTMN ++ VFGN+G +E MERWYEKF +GIEP+ RTF ILI
Sbjct: 267 MEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILI 326
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F QM +G++
Sbjct: 327 GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMR 386
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 387 ADTKTFCCLINGYANAGLF 405
Score = 124 bits (310), Expect = 1e-25
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A +++ P+ QP++ TY L+ ++ E V S++ M E P++ V+
Sbjct: 196 AFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVL 255
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y + G D + M + +C+PDV+T +I++ + + E+ GI
Sbjct: 256 SGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGI 315
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGELE 1127
P T T NILI YGK + +M +V+ M + P WT NNVI F + G+ +
Sbjct: 316 EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEAFADVGDAK 371
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME +E+ G+ D +TF LI+ Y A L+ K+ ++ K +P T+ YN VI
Sbjct: 372 NMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAVI 431
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ ++D VF +M +PD+ T ++ AY + M
Sbjct: 432 SACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGM 474
Score = 68.6 bits (166), Expect = 6e-09
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Frame = +3
Query: 537 TAMTLEETLIHHIYTK--NWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVH 710
T T+ + ++ Y K + Q K+ + + +P++ T +LS+ G E +
Sbjct: 245 TPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMME 304
Query: 711 SVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQH 890
+ + G EP++ +I AY + D S+ + M+ TY+ +I+
Sbjct: 305 RWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNNVIEA 363
Query: 891 CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIP 1070
+ K + E+M A G+ +T T LI GY AG F ++ + S L + IP
Sbjct: 364 FADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKV--IGSVKLAGKLEIP 421
Query: 1071 DIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
+ + N VI +L M+R +++ + +PD +T+ I++ +YG+ + D++
Sbjct: 422 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRV 478
>ref|XP_006647081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Oryza brachyantha]
Length = 498
Score = 343 bits (880), Expect = 1e-91
Identities = 164/319 (51%), Positives = 220/319 (68%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+PI VKK A + A T+ E L I KNWQ+AL++F+ML++QP Y P GT+
Sbjct: 89 TPIKNVKKRLDARADAKAWACTVTEALADRIAAKNWQEALQVFEMLKEQPFYHPKEGTFM 148
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP S+F M GC P E TA+I+AY RNG LD+AF L +MK++
Sbjct: 149 KLLLLLGRSGQPSRARSLFEEMLSQGCNPTPELYTALIAAYCRNGLLDDAFRLLDDMKAS 208
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++ S+F V L EM+ GI PNTVT+NI++ GYG+AGR +
Sbjct: 209 PLCQPDVYTYSTIIKACVDDSRFDMVDALYREMADRGIAPNTVTQNIVLSGYGRAGRLDD 268
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S + PD+WTMN ++ +FGNRG++E ME+WYEKF YGIEP+ RT ILI
Sbjct: 269 MEKVLSAMLESRTSKPDVWTMNIILSLFGNRGQVELMEKWYEKFRGYGIEPETRTLNILI 328
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VMEYM K + PWTTAT+N VI AF + + K ++ FNQM +G+K
Sbjct: 329 GAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFAESADAKNMEHTFNQMRAEGMK 388
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LIN ++ A +F
Sbjct: 389 PDTKTFCCLINGFSNAGLF 407
Score = 122 bits (306), Expect = 4e-25
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A +L ++ P QP++ TY ++ ++ + V +++ M + G P++ V+
Sbjct: 198 AFRLLDDMKASPLCQPDVYTYSTIIKACVDDSRFDMVDALYREMADRGIAPNTVTQNIVL 257
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y R G LD+ + M + + +PDV+T +I++ + + + + E+ GI
Sbjct: 258 SGYGRAGRLDDMEKVLSAMLESRTSKPDVWTMNIILSLFGNRGQVELMEKWYEKFRGYGI 317
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWT---MNNVIRVFGNRGELE 1127
P T T NILI YGK + +M V+ M + P WT NNVI F + +
Sbjct: 318 EPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATFNNVIEAFAESADAK 373
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME + + G++PD +TF LI+ + A L+ K+ +++ + +P T+ +N V+
Sbjct: 374 NMEHTFNQMRAEGMKPDTKTFCCLINGFSNAGLFHKVVGMVKLAERLDVPMDTSFHNAVL 433
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ VF M PD+ T L+ AY + M
Sbjct: 434 AACAKADDLMEMERVFRHMKQIQCVPDATTYSVLVEAYRKEGM 476
Score = 67.8 bits (164), Expect = 1e-08
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Frame = +3
Query: 603 KLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISA 782
K+ + + +P++ T +LSL G Q E + + + G EP++ +I A
Sbjct: 271 KVLSAMLESRTSKPDVWTMNIILSLFGNRGQVELMEKWYEKFRGYGIEPETRTLNILIGA 330
Query: 783 YARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILP 962
Y + D ++ + M+ + T++ +I+ E++ K + +M A G+ P
Sbjct: 331 YGKKRMYDKMSAVMEYMRKL-AFPWTTATFNNVIEAFAESADAKNMEHTFNQMRAEGMKP 389
Query: 963 NTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIP-DIWTMNNVIRVFGNRGELETMER 1139
+T T LI G+ AG F ++ ++ L +P D N V+ +L MER
Sbjct: 390 DTKTFCCLINGFSNAGLFHKVVGMVK--LAERLDVPMDTSFHNAVLAACAKADDLMEMER 447
Query: 1140 WYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVME 1253
+ + PD T+ +L+ +Y + + DK+ + +
Sbjct: 448 VFRHMKQIQCVPDATTYSVLVEAYRKEGMTDKIYGLQQ 485
>ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein
SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 343 bits (879), Expect = 1e-91
Identities = 157/319 (49%), Positives = 224/319 (70%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ VKK A + A T+ E L + +KNWQ+AL++F+ML++QP Y P GT+
Sbjct: 151 TPLKNVKKRLDARAEAKAWACTVTEALADRVTSKNWQEALQVFEMLKEQPFYHPKEGTFM 210
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+L+ LLGR QP H +F+ M + GC+P TA+I AY R+G LD+A L +MK +
Sbjct: 211 KLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGS 270
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++A++F + + ++M+ I PNTVT+NI++ GYGKAGR +
Sbjct: 271 PLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDD 330
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS+ML S +C PD+WTMN ++ +FGN+G++E ME+WYEKF +YGIEP+ RT ILI
Sbjct: 331 MEKVLSDMLDSTACKPDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILI 390
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VMEYM K + PWTTATYN VI AF G+ K ++ FNQM +G+K
Sbjct: 391 GAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMK 450
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LIN +++A F
Sbjct: 451 PDTKTFCCLINGFSKAGQF 469
Score = 125 bits (314), Expect = 4e-26
Identities = 74/283 (26%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
AL+L ++ P QP++ TY ++ + + + ++ M E P++ V+
Sbjct: 260 ALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVL 319
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y + G LD+ + +M + +C+PDV+T +I++ + + + + E+ + GI
Sbjct: 320 SGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGI 379
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGELE 1127
P T T NILI YGK + +M V+ M + P WT NNVI F G+ +
Sbjct: 380 EPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATYNNVIEAFAEAGDAK 435
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME + + + G++PD +TF LI+ + +A + K+ +++ + +P T+ +N ++
Sbjct: 436 NMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERLDVPANTSFHNAIL 495
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ VF M PD+ T L+ AY + M
Sbjct: 496 GACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGM 538
Score = 70.9 bits (172), Expect = 1e-09
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Frame = +3
Query: 639 QPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFS 818
+P++ T +LSL G Q E + + + G EP++ +I AY + D +
Sbjct: 345 KPDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSA 404
Query: 819 LFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGY 998
+ + M+ + TY+ +I+ EA K + +M + G+ P+T T LI G+
Sbjct: 405 VMEYMRKL-AFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGF 463
Query: 999 GKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEP 1175
KAG+F ++ ++ L +P + +N ++ +L MER + + +P
Sbjct: 464 SKAGQFHKVVGMVK--LAERLDVPANTSFHNAILGACARADDLMEMERVFRHMKHTQCDP 521
Query: 1176 DIRTFEILISSYGQAELYDKM 1238
D T+ IL+ +Y + + DK+
Sbjct: 522 DAVTYSILVEAYRKEGMTDKI 542
>ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|30961817|gb|AAP37977.1| PPR2
[Zea mays] gi|224028857|gb|ACN33504.1| unknown [Zea mays]
gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide
repeat 2 [Zea mays]
Length = 571
Score = 342 bits (877), Expect = 2e-91
Identities = 159/319 (49%), Positives = 221/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ VKK A + A T+ E L + +KNWQ+AL++F+ML++QP Y P GTY
Sbjct: 162 TPLKNVKKRLDARADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYM 221
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+L+ LLGR QP H +F+ M + GC+P E TA+I AY R+G LD A L +MKS+
Sbjct: 222 KLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSS 281
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++A++F + ++M+ I PNTVT+NI++ GYGKAGR +
Sbjct: 282 PLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDD 341
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS+ML S SC PD+WTMN ++ +FGNRGE+E MERWYEKF YG+EP+ RT ILI
Sbjct: 342 MERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILI 401
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VME+M K + PWTTATYN VI AF G+ ++ FNQM +G++
Sbjct: 402 GAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMR 461
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LI+ ++ A F
Sbjct: 462 PDTKTFCCLIDGFSRAGQF 480
Score = 124 bits (312), Expect = 8e-26
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+AL+L ++ P QP++ TY ++ + + +++ M E P++ V
Sbjct: 270 EALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIV 329
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G LD+ + +M + SC+PDV+T +I++ + + + E+ G
Sbjct: 330 LSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYG 389
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
+ P T T NILI YGK + +M V+ M + P WT NNVI F G+
Sbjct: 390 VEPETRTLNILIGAYGKRRMYDKMSAVMEHM--RKLAFP--WTTATYNNVIEAFAEAGDA 445
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVV 1304
ME + + + G+ PD +TF LI + +A + K+ +++ + +P T +N V
Sbjct: 446 GNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAV 505
Query: 1305 IHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
+ A ++ +++ VF +M +PD++T L+ AY + M
Sbjct: 506 LGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGM 549
>gb|ACG30078.1| PPR2 [Zea mays]
Length = 580
Score = 342 bits (876), Expect = 3e-91
Identities = 159/319 (49%), Positives = 221/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ VKK A + A T+ E L + +KNWQ+AL++F+ML++QP Y P GTY
Sbjct: 171 TPLKNVKKRLDARADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYM 230
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+L+ LLGR QP H +F+ M + GC+P E TA+I AY R+G LD A L +MKS+
Sbjct: 231 KLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSS 290
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDV+TYS +I+ C++A++F + ++M+ I PNTVT+NI++ GYGKAGR +
Sbjct: 291 PLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDD 350
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS+ML S SC PD+WTMN ++ +FGNRGE+E MERWYEKF YG+EP+ RT ILI
Sbjct: 351 MERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILI 410
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM++VME+M K + PWTTATYN VI AF G+ ++ FNQM +G++
Sbjct: 411 GAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMR 470
Query: 1383 PDSATCCSLINAYAEANMF 1439
PD+ T C LI+ ++ A F
Sbjct: 471 PDTKTFCCLIDGFSRAGQF 489
Score = 125 bits (313), Expect = 6e-26
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+AL+L ++ P QP++ TY ++ + + +++ M E P++ V
Sbjct: 279 EALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIV 338
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G LD+ + +M + SC+PDV+T +I++ + + + E+ G
Sbjct: 339 LSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYG 398
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
+ P T T NILI YGK + +M V+ M + P WT NNVI F G+
Sbjct: 399 VEPETRTLNILIGAYGKRRMYDKMSAVMEHM--RKLAFP--WTTATYNNVIEAFAEAGDA 454
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVV 1304
ME + + + G+ PD +TF LI + +A + K+ +++ + +P T +N V
Sbjct: 455 GNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPANTPFHNAV 514
Query: 1305 IHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
+ A ++ +++ VF +M +PD++T L+ AY + M
Sbjct: 515 LGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGM 558
>ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 341 bits (874), Expect = 5e-91
Identities = 165/319 (51%), Positives = 219/319 (68%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+P+ +KK K++ A T+ E+L I+ K+W QAL++F MLR+Q YQP GT
Sbjct: 71 TPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTCM 130
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+L+ LLG+ QP H +F TM E+G EP E TA+++AY R+ +D AFS+ EMK
Sbjct: 131 KLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKL 190
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDVFTYS LI+ C++A KF V L EEM+ I PNTVT+NI++ GYGKAG F +
Sbjct: 191 PLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQ 250
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S +C PD+WTMN +I VFGN G+++ E+WYEKF +GIEP+ RTF ILI
Sbjct: 251 MEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILI 310
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM+SVMEYM K PWTT+TYN VI AF + G+ K ++ F+QM +G+K
Sbjct: 311 GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMK 370
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 371 ADTKTLCCLINGYANAGLF 389
Score = 70.5 bits (171), Expect = 2e-09
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Frame = +3
Query: 588 WQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCT 767
+ Q K+ + Q +P++ T ++S+ G Q + + + G EP++
Sbjct: 248 FDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFN 307
Query: 768 AVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSA 947
+I AY + D S+ + M+ TY+ +I+ +A K + ++M A
Sbjct: 308 ILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRA 366
Query: 948 MGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGEL 1124
G+ +T T LI GY AG F ++ + S L + IP+ T N V+ +L
Sbjct: 367 EGMKADTKTLCCLINGYANAGLFHKV--ISSVRLAGKLEIPENITFYNAVLSACAKAEDL 424
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
MER +++ + +PD T+ I+I +Y + + DK+
Sbjct: 425 MEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKI 462
>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 491
Score = 341 bits (874), Expect = 5e-91
Identities = 161/319 (50%), Positives = 223/319 (69%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+PI +KK +++ A T+ E L I K W QAL++F+ML++QP Y P GTY
Sbjct: 75 TPIKNIKKKLDRKNKAKAWVNTVTEALSDRILKKQWFQALEVFEMLKEQPFYHPKEGTYM 134
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLGR QP+ H +F+ M E+G EP +E TA+++AY RN D AFS+ Q+MK+
Sbjct: 135 KLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFSILQQMKTL 194
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P C PDV+TYS L++ C++AS+F+ V L +EM I PNTVT+NI++ GYGKAG + +
Sbjct: 195 PRCLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQ 254
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS ML S C PD+WTMN ++ VFGN+G+++ ME+WYEKF ++GIEP+ RTF ILI
Sbjct: 255 MERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILI 314
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM+SVME+M K PWTT+TYN VI AF G++K ++ F+QM +G+K
Sbjct: 315 GAYGKKRMYDKMSSVMEFMRKLQFPWTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMK 374
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 375 ADTKTFCCLINGYANAGLF 393
Score = 125 bits (314), Expect = 4e-26
Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 3/284 (1%)
Frame = +3
Query: 594 QALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAV 773
+A + + ++ P+ P++ TY LL ++ E V +++ M E P++ V
Sbjct: 183 EAFSILQQMKTLPRCLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIV 242
Query: 774 ISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMG 953
+S Y + G D + M + C+PDV+T +I++ + + + E+ + G
Sbjct: 243 LSGYGKAGMYDQMERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFG 302
Query: 954 ILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGEL 1124
I P T T NILI YGK + +M +V+ M + P WT NNVI F G++
Sbjct: 303 IEPETRTFNILIGAYGKKRMYDKMSSVMEFMRKLQ--FP--WTTSTYNNVIEAFAVAGDV 358
Query: 1125 ETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVV 1304
+ ME +++ G++ D +TF LI+ Y A L+ K+ S ++ K +P T YN +
Sbjct: 359 KHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLATKFEIPENTTFYNAI 418
Query: 1305 IHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
I A ++ +++ VF +M + +PDS T ++ AY M
Sbjct: 419 ISACAKAEDLMEMERVFKRMKDNQCQPDSTTYSIMVEAYKREGM 462
Score = 70.5 bits (171), Expect = 2e-09
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Frame = +3
Query: 537 TAMTLEETLIHHIYTKN--WQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVH 710
T T+ + ++ Y K + Q ++ + + + +P++ T +LS+ G Q + +
Sbjct: 233 TPNTVTQNIVLSGYGKAGMYDQMERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLME 292
Query: 711 SVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQH 890
+ + G EP++ +I AY + D S+ + M+ TY+ +I+
Sbjct: 293 KWYEKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVMEFMRKL-QFPWTTSTYNNVIEA 351
Query: 891 CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIP 1070
A K + ++M A G+ +T T LI GY AG F ++ + S L ++ IP
Sbjct: 352 FAVAGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKV--ISSVQLATKFEIP 409
Query: 1071 DIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKM 1238
+ T N +I +L MER +++ + +PD T+ I++ +Y + + DK+
Sbjct: 410 ENTTFYNAIISACAKAEDLMEMERVFKRMKDNQCQPDSTTYSIMVEAYKREGMNDKV 466
>ref|XP_006407947.1| hypothetical protein EUTSA_v10020626mg [Eutrema salsugineum]
gi|557109093|gb|ESQ49400.1| hypothetical protein
EUTSA_v10020626mg [Eutrema salsugineum]
Length = 480
Score = 340 bits (872), Expect = 9e-91
Identities = 165/319 (51%), Positives = 218/319 (68%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTA----MTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+PI VKK +R A T+ ETL I K W QAL++F MLR+QP YQP GTY
Sbjct: 69 TPIKNVKKKLDRRSKANGWVCTVTETLSDLIAKKQWLQALEVFGMLREQPFYQPKEGTYM 128
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLG+ QP +F+ M E+G EP +E TA+++AY RN +D AFS+ MKS
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTAELYTALLAAYTRNNLIDEAFSILDRMKSL 188
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDVFTYS L++ C++AS F V L +EM I PNTVT+NI++ G+G+ GRF +
Sbjct: 189 PRCQPDVFTYSTLLKACVDASLFDLVDSLYKEMDERLITPNTVTQNIVLSGFGRVGRFDQ 248
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS+ML S SC PD+WTMN ++ VFGN G+++ ME WYEKF +GIEP+ R+F ILI
Sbjct: 249 MEKVLSDMLVSTSCKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRSFNILI 308
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
+YG+ +YDKM+SVMEYM K PWTT+TYN +I AF + G+ K ++ F+QM +G+K
Sbjct: 309 GAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEYTFDQMRSEGMK 368
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 369 ADTKTFCCLINGYANAGLF 387
Score = 123 bits (309), Expect = 2e-25
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 5/292 (1%)
Frame = +3
Query: 576 YTKN--WQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEP 749
YT+N +A + ++ P+ QP++ TY LL + + V S++ M E P
Sbjct: 169 YTRNNLIDEAFSILDRMKSLPRCQPDVFTYSTLLKACVDASLFDLVDSLYKEMDERLITP 228
Query: 750 DSEFCTAVISAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSEL 929
++ V+S + R G D + +M + SC+PDV+T +I++ K +
Sbjct: 229 NTVTQNIVLSGFGRVGRFDQMEKVLSDMLVSTSCKPDVWTMNIILSVFGNMGKIDMMESW 288
Query: 930 LEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIR 1100
E+ GI P T + NILI YGK + +M +V+ M E P WT NN+I
Sbjct: 289 YEKFRNFGIEPETRSFNILIGAYGKKRMYDKMSSVMEYMRKLE--FP--WTTSTYNNIIE 344
Query: 1101 VFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPW 1280
F + G+ + ME +++ + G++ D +TF LI+ Y A L+ K+ S ++ K +P
Sbjct: 345 AFADVGDAKNMEYTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 404
Query: 1281 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
T+ YN VI A ++ +++ V+ +M DS T +I AY + M
Sbjct: 405 NTSFYNAVISACAKADDLIEMERVYKRMKERECVCDSRTFEIMIEAYGKEGM 456
Score = 72.4 bits (176), Expect = 4e-10
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Frame = +3
Query: 639 QPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFS 818
+P++ T +LS+ G + + + S + + G EP++ +I AY + D S
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRSFNILIGAYGKKRMYDKMSS 322
Query: 819 LFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGY 998
+ + M+ TY+ +I+ + K + ++M + G+ +T T LI GY
Sbjct: 323 VMEYMRKL-EFPWTTSTYNNIIEAFADVGDAKNMEYTFDQMRSEGMKADTKTFCCLINGY 381
Query: 999 GKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEP 1175
AG F ++ + S L ++ IP+ + N VI +L MER Y++ +
Sbjct: 382 ANAGLFHKV--ISSVQLAAKFEIPENTSFYNAVISACAKADDLIEMERVYKRMKERECVC 439
Query: 1176 DIRTFEILISSYGQAELYDKM 1238
D RTFEI+I +YG+ + DK+
Sbjct: 440 DSRTFEIMIEAYGKEGMNDKI 460
>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
[Arabidopsis thaliana] gi|20466300|gb|AAM20467.1| unknown
protein [Arabidopsis thaliana] gi|30387593|gb|AAP31962.1|
At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 339 bits (870), Expect = 1e-90
Identities = 165/319 (51%), Positives = 219/319 (68%), Gaps = 4/319 (1%)
Frame = +3
Query: 495 SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 662
+PI VKK +R A T+ ETL I K W QAL++F MLR+Q YQP GTY
Sbjct: 69 TPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYM 128
Query: 663 QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFSLFQEMKSN 842
+LL LLG+ QP +F+ M E+G EP E TA+++AY R+ +D+AFS+ +MKS
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 843 PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 1022
P CQPDVFTYS L++ C++AS+F V L +EM I PNTVT+NI++ GYG+ GRF +
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 1023 MENVLSEMLTSESCIPDIWTMNNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILI 1202
ME VLS+ML S +C PD+WTMN ++ VFGN G+++ ME WYEKF +GIEP+ RTF ILI
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308
Query: 1203 SSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1382
SYG+ +YDKM+SVMEYM K PWTT+TYN +I AF + G+ K ++ F+QM +G+K
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368
Query: 1383 PDSATCCSLINAYAEANMF 1439
D+ T C LIN YA A +F
Sbjct: 369 ADTKTFCCLINGYANAGLF 387
Score = 126 bits (316), Expect = 3e-26
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Frame = +3
Query: 597 ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 776
A + ++ PQ QP++ TY LL +Q + V S++ M E P++ V+
Sbjct: 178 AFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL 237
Query: 777 SAYARNGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 956
S Y R G D + +M + +C+PDV+T +I++ K + E+ GI
Sbjct: 238 SGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 957 LPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGELE 1127
P T T NILI YGK + +M +V+ M E P WT NN+I F + G+ +
Sbjct: 298 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE--FP--WTTSTYNNIIEAFADVGDAK 353
Query: 1128 TMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNVVI 1307
ME +++ + G++ D +TF LI+ Y A L+ K+ S ++ K +P TA YN VI
Sbjct: 354 NMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVI 413
Query: 1308 HAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 1436
A ++ +++ V+ +M DS T ++ AY + M
Sbjct: 414 SACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGM 456
Score = 65.5 bits (158), Expect = 5e-08
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +3
Query: 639 QPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARNGYLDNAFS 818
+P++ T +LS+ G + + + S + + G EP++ +I +Y + D S
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 819 LFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGY 998
+ + M+ TY+ +I+ + K + ++M + G+ +T T LI GY
Sbjct: 323 VMEYMRKL-EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGY 381
Query: 999 GKAGRFQEMENVLSEMLTSESCIPDIWTMNN-VIRVFGNRGELETMERWYEKFETYGIEP 1175
AG F ++ + S L ++ IP+ N VI +L MER Y + +
Sbjct: 382 ANAGLFHKV--ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVC 439
Query: 1176 DIRTFEILISSYGQAELYDKM 1238
D RTFEI++ +Y + + DK+
Sbjct: 440 DSRTFEIMVEAYEKEGMNDKI 460