BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004275
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containi...   225   5e-57
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   225   6e-57
emb|CBI26002.3| unnamed protein product [Vitis vinifera]              225   6e-57
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   225   6e-57
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   225   6e-57
ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [S...   222   4e-56
ref|XP_006349961.1| PREDICTED: pentatricopeptide repeat-containi...   222   5e-56
ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containi...   221   7e-56
gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [...   221   7e-56
ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containi...   221   7e-56
ref|XP_004252946.1| PREDICTED: pentatricopeptide repeat-containi...   221   9e-56
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   220   2e-55
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar...   220   2e-55
ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata] g...   220   2e-55
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...   220   2e-55
gb|ESW26448.1| hypothetical protein PHAVU_003G120600g [Phaseolus...   219   3e-55
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   219   3e-55
ref|XP_006297445.1| hypothetical protein CARUB_v10013468mg, part...   219   3e-55
gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily p...   218   8e-55
gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indi...   218   8e-55

>ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cicer arietinum]
          Length = 499

 Score =  225 bits (574), Expect = 5e-57
 Identities = 104/183 (56%), Positives = 134/183 (73%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A KF+ V  + EEM+   I+PNTVT+NI++ GYGKAG F +ME VL  ML S SC P
Sbjct: 218 CVDAFKFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKAGMFDQMEKVLSSMLQSTSCKP 277

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 278 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 337

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  FNQM  +G++ D+ T C LIN +A A
Sbjct: 338 EYMRKLQFPWTTSTYNNVIDAFADAGDAKNMEYTFNQMRSEGMRADTKTFCCLINGFANA 397

Query: 546 NMF 554
            +F
Sbjct: 398 GLF 400



 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 53/168 (31%), Positives = 85/168 (50%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 303 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIDAFAD 361

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  + +  + G+  D +TF  LI+ +  AGL+ K+ S +    K   P  TA 
Sbjct: 362 AGDAKNMEYTFNQMRSEGMRADTKTFCCLINGFANAGLFHKVISSVHLAAKLETPENTAF 421

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN V+ A     ++ +++ VF +M  +  +PD+ T   ++ AY +  M
Sbjct: 422 YNAVLSACAKAEDLMEMERVFKRMKDNQCQPDNTTYSIMVKAYRKQGM 469



 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L   M   G  P       L+  Y ++    E  ++L EM     C PDV+T + +I+V
Sbjct: 158 QLFTTMIEEGCDPTPELYTALLAAYCRSNMIDEALSILNEMKNHPLCQPDVFTYSTLIKV 217

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +  + E +E  YE+     I P+  T  I++S YG+AG++D+M  V+  M   TS   
Sbjct: 218 CVDAFKFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKAGMFDQMEKVLSSMLQSTSCKP 277

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N +I  F N G+I  ++  + +    G++P++ T   LI AY +  M+
Sbjct: 278 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 330


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  225 bits (573), Expect = 6e-57
 Identities = 105/183 (57%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A KF  V  L EEM+   I+PNTVT+NI++ GYGKAG F +ME VL  ML S +C P
Sbjct: 207 CVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKP 266

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 267 DVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVM 326

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 327 EYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANA 386

Query: 546 NMF 554
            +F
Sbjct: 387 GLF 389



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 52/168 (30%), Positives = 82/168 (48%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 292 EKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFAD 350

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +T   LI+ Y  AGL+ K+ S +    K  +P     
Sbjct: 351 AGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPENITF 410

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN V+ A     ++ +++ VF +M     +PD  T   +I AY +  M
Sbjct: 411 YNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGM 458



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  +VL EM     C PDV+T + +I+V
Sbjct: 147 QLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKV 206

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +  + + +E  YE+     I P+  T  I++  YG+AG++D+M  V+  M   T+   
Sbjct: 207 CVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKP 266

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N +I  F N G+I  ++  + +    G++P++ T   LI AY +  M+
Sbjct: 267 DVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILIGAYGKKRMY 319


>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  225 bits (573), Expect = 6e-57
 Identities = 104/183 (56%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VL  ML S S  P
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGN+G+IE MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 344

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LI  YA A
Sbjct: 345 EYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANA 404

Query: 546 NMF 554
            +F
Sbjct: 405 GLF 407



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L +M T   C PDV+T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +    E +E  YE+ +   I P+  T  I++S YG+AG +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N ++  F N G+I+ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 337



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFSD 368

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDK------MASVMEYMHKTSL 389
            G+ + ME  +++    G++ D +TF  LI  Y  AGL+ K      M  V   M     
Sbjct: 369 VGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKDKHC 428

Query: 390 PWTTATYNVVIHAFKNTG---EIKQIDPVFNQMILDGVKPD 503
              + TY++++ A+K  G   +I  ++    +M+ DG K D
Sbjct: 429 QPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRMVADGPKGD 469


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  225 bits (573), Expect = 6e-57
 Identities = 104/183 (56%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VL  ML S S  P
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGN+G+IE MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 344

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LI  YA A
Sbjct: 345 EYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANA 404

Query: 546 NMF 554
            +F
Sbjct: 405 GLF 407



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/168 (33%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFSD 368

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +TF  LI  Y  AGL+ K+ S ++   K  +P  T+ 
Sbjct: 369 VGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSF 428

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN VI A     ++ +++ VFN+M     +PDS T   ++ AY +  M
Sbjct: 429 YNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L +M T   C PDV+T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +    E +E  YE+ +   I P+  T  I++S YG+AG +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N ++  F N G+I+ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 337


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  225 bits (573), Expect = 6e-57
 Identities = 104/183 (56%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VL  ML S S  P
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGN+G+IE MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 344

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LI  YA A
Sbjct: 345 EYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANA 404

Query: 546 NMF 554
            +F
Sbjct: 405 GLF 407



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/168 (33%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFSD 368

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +TF  LI  Y  AGL+ K+ S ++   K  +P  T+ 
Sbjct: 369 VGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSF 428

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN VI A     ++ +++ VFN+M     +PDS T   ++ AY +  M
Sbjct: 429 YNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L +M T   C PDV+T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +    E +E  YE+ +   I P+  T  I++S YG+AG +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N ++  F N G+I+ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 285 DVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 337


>ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
           gi|241924727|gb|EER97871.1| hypothetical protein
           SORBIDRAFT_02g001400 [Sorghum bicolor]
          Length = 560

 Score =  222 bits (566), Expect = 4e-56
 Identities = 98/183 (53%), Positives = 136/183 (74%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A++F  +  + ++M+   I PNTVT+NI++ GYGKAGR  +ME VL +ML S +C P
Sbjct: 287 CVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKP 346

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGN+G++E MEKWYEKF +YGIEP+ RT  ILI +YG+  +YDKM++VM
Sbjct: 347 DVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVM 406

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K + PWTTATYN VI AF   G+ K ++  FNQM  +G+KPD+ T C LIN +++A
Sbjct: 407 EYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKA 466

Query: 546 NMF 554
             F
Sbjct: 467 GQF 469



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/168 (29%), Positives = 86/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+  + GI P T T NILI  YGK   + +M  V+ E +   +      T NNVI  F  
Sbjct: 372 EKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVM-EYMRKLAFPWTTATYNNVIEAFAE 430

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  + +  + G++PD +TF  LI+ + +AG + K+  +++   +  +P  T+ 
Sbjct: 431 AGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERLDVPANTSF 490

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           +N ++ A     ++ +++ VF  M      PD+ T   L+ AY +  M
Sbjct: 491 HNAILGACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGM 538



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L +EM   G  P       LI  Y ++G   +   +L +M  S  C PDV+T + +I+ 
Sbjct: 227 QLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKA 286

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPW 395
             +    + ++  Y+      I P+  T  I++S YG+AG  D M  V+ + +  T+   
Sbjct: 287 CVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKP 346

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+++ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 347 DVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMY 399


>ref|XP_006349961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Solanum tuberosum]
          Length = 495

 Score =  222 bits (565), Expect = 5e-56
 Identities = 100/183 (54%), Positives = 137/183 (74%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  L E+M+   I+PNTVT+NI++ GYG+AG+++EME VLL ML S    P
Sbjct: 213 CVDASRFDLVDSLYEQMTERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLLGMLESTDSRP 272

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           D+WTMN ++ +FGN+G++E ME+WYEKF ++GIEP+ RTF ILIS+YG+  +YDKM+SVM
Sbjct: 273 DIWTMNTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM 332

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K S PWTT+TYN VI AF + G+ K ++  F+QM  +G K D+ T C LI  YA A
Sbjct: 333 EYMRKLSFPWTTSTYNNVIEAFSDIGDAKHMEYTFDQMRAEGAKGDTKTFCCLIRGYANA 392

Query: 546 NMF 554
            +F
Sbjct: 393 GLF 395



 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 53/168 (31%), Positives = 86/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+  + GI P T T NILI  YGK   + +M +V+ E +   S      T NNVI  F +
Sbjct: 298 EKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM-EYMRKLSFPWTTSTYNNVIEAFSD 356

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G + D +TF  LI  Y  AGL+ K+ S ++   K  +P   + 
Sbjct: 357 IGDAKHMEYTFDQMRAEGAKGDTKTFCCLIRGYANAGLFPKVISTVQLAGKLEIPENNSF 416

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           ++ VI+A     ++ +++ VF +M   G +PD  T   +  AY +  M
Sbjct: 417 FSSVIYACAKAEDLLEMERVFKRMKDKGFQPDDTTYTVMAEAYRKEGM 464



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 41/173 (23%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L + M   G+ P       L+  Y ++    +   +L +M+    C P+V+T + +I+ 
Sbjct: 153 QLFDTMIEEGLEPTPEFYTALVGAYCRSNIIDKAFAILQQMIELPYCQPNVYTYSILIKA 212

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASV-MEYMHKTSLPW 395
             +    + ++  YE+     I P+  T  I++S YG+AG Y++M  V +  +  T    
Sbjct: 213 CVDASRFDLVDSLYEQMTERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLLGMLESTDSRP 272

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N ++  F N G+++ ++  + +    G++P++ T   LI+AY +  M+
Sbjct: 273 DIWTMNTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMY 325


>ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like isoform X1 [Setaria italica]
          Length = 571

 Score =  221 bits (564), Expect = 7e-56
 Identities = 99/183 (54%), Positives = 137/183 (74%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A++F  +  + ++M+   I PNTVT+NI++ GYGKAGR  +ME VL +ML S +C P
Sbjct: 298 CVDATRFDLIDAMYKDMAERLISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSTTCKP 357

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGN G+IE+MEKWYEKF +YGIEP+ RT  ILI +YG+  +YDKM++VM
Sbjct: 358 DVWTMNIILSLFGNMGQIESMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVM 417

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K + PWTTATYN VI AF   G+ K ++  FNQM  +G+KPD+ T C LIN +++A
Sbjct: 418 EYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKA 477

Query: 546 NMF 554
            +F
Sbjct: 478 GLF 480



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 50/168 (29%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+  + GI P T T NILI  YGK   + +M  V+ E +   +      T NNVI  F  
Sbjct: 383 EKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVM-EYMRKLAFPWTTATYNNVIEAFAE 441

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  + +  + G++PD +TF  LI+ + +AGL+ K+  +++   +  +P  T+ 
Sbjct: 442 AGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERLDVPANTSF 501

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           +N ++ A     ++ +++ VF  M      PD+ T   L+ AY +  M
Sbjct: 502 HNAILEACAKADDLMEMERVFMHMKHKQCDPDAMTYSILVEAYRKEGM 549



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L  EM   G  P       LI  Y ++G   +   +L +M +S  C PDV+T + +I+ 
Sbjct: 238 QLFNEMLQQGCQPTPELYTALIGAYCRSGLMDDALQLLTDMKSSPLCQPDVYTYSTIIKA 297

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPW 395
             +    + ++  Y+      I P+  T  I++S YG+AG  D M  V+ + +  T+   
Sbjct: 298 CVDATRFDLIDAMYKDMAERLISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSTTCKP 357

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I+ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 358 DVWTMNIILSLFGNMGQIESMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMY 410


>gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [Prunus persica]
          Length = 485

 Score =  221 bits (564), Expect = 7e-56
 Identities = 102/183 (55%), Positives = 134/183 (73%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A KF+ V  L EEM+   I PNTVT+NI++ GYGKAG++ +ME VL  ML   +C P
Sbjct: 220 CIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKP 279

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN+G+I+ ME+WYEKF  +GIEP+ RTF ILI +YG+  LYDKM++VM
Sbjct: 280 DVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVM 339

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTTATYN VI AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 340 EYMRKLQFPWTTATYNNVIEAFADVGDAKNMEYTFDQMRAEGMKADTKTFCCLINGYANA 399

Query: 546 NMF 554
            +F
Sbjct: 400 GLF 402



 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 55/168 (32%), Positives = 85/168 (50%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M  V+ E +          T NNVI  F +
Sbjct: 305 EKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVM-EYMRKLQFPWTTATYNNVIEAFAD 363

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +TF  LI+ Y  AGL+ K+ S ++   K  +P  T  
Sbjct: 364 VGDAKNMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVVSSVQLAGKFEIPENTTF 423

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN VI A     ++ +++ VF +M      PDS T   ++ AY++  M
Sbjct: 424 YNAVIAACAKAEDLMEMERVFKRMKEKQCPPDSTTYSLMVEAYSKEGM 471



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L + M   G  P       L+  Y +     E  +VL +M T   C PDV+T + +I+V
Sbjct: 160 QLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLNQMKTLPHCQPDVFTYSTLIKV 219

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHK--TSLP 392
             +  + E +E  YE+     I P+  T  I++S YG+AG YD+M  V+  M +  T  P
Sbjct: 220 CIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKP 279

Query: 393 WTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
               T NV++  F N G+I  ++  + +    G++P++ T   LI AY +  ++
Sbjct: 280 -DVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNILIGAYGKKKLY 332


>ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  221 bits (564), Expect = 7e-56
 Identities = 104/183 (56%), Positives = 131/183 (71%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A KF  V  L EEM+   I PNTVT+NI++ GYGKAG F +ME VL  ML S +C P
Sbjct: 207 CVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKP 266

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN +I VFGN G+I+  EKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 267 DVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVM 326

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 327 EYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANA 386

Query: 546 NMF 554
            +F
Sbjct: 387 GLF 389



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 52/168 (30%), Positives = 82/168 (48%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 292 EKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFAD 350

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +T   LI+ Y  AGL+ K+ S +    K  +P     
Sbjct: 351 AGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPENITF 410

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN V+ A     ++ +++ VF +M     +PD  T   +I AY +  M
Sbjct: 411 YNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGM 458



 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  +VL EM     C PDV+T + +I+V
Sbjct: 147 QLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKV 206

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +  + + ++  YE+     I P+  T  I++  YG+AG++D+M  V+  M   T+   
Sbjct: 207 CVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKP 266

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N +I  F N G+I   +  + +    G++P++ T   LI AY +  M+
Sbjct: 267 DVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILIGAYGKKRMY 319


>ref|XP_004252946.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 495

 Score =  221 bits (563), Expect = 9e-56
 Identities = 100/183 (54%), Positives = 137/183 (74%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  L E+M+   I+PNTVT+NI++ GYG+AG+++EME VL  ML S    P
Sbjct: 213 CVDASRFDLVDSLYEQMAERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLSGMLESTDSRP 272

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           D+WTMN ++ +FGN+G++E ME+WYEKF ++GIEP+ RTF ILIS+YG+  +YDKM+SVM
Sbjct: 273 DIWTMNTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM 332

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K S PWTT+TYN VI AF + G+ K ++  F+QM  +GVK D+ T C LI  YA A
Sbjct: 333 EYMRKLSFPWTTSTYNNVIEAFSDIGDAKHMEYTFDQMRAEGVKGDTKTFCCLIRGYANA 392

Query: 546 NMF 554
            +F
Sbjct: 393 GLF 395



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 52/168 (30%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+  + GI P T T NILI  YGK   + +M +V+ E +   S      T NNVI  F +
Sbjct: 298 EKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM-EYMRKLSFPWTTSTYNNVIEAFSD 356

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +TF  LI  Y  AGL+ K+ + ++   K  +P   + 
Sbjct: 357 IGDAKHMEYTFDQMRAEGVKGDTKTFCCLIRGYANAGLFPKVINAVQLAGKLEIPENNSF 416

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           ++ VI+A     ++ +++ VF +M   G +PD  T   +  AY +  M
Sbjct: 417 FSSVIYACAKAEDLLEMERVFKRMKDKGFRPDDTTYTVMAEAYRKEGM 464



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L + M   G+ P       L+  Y ++    +   +L  M+    C P+V+T + +I+ 
Sbjct: 153 QLFDTMIEEGLDPTPEFYTALVGAYCRSNIIDKAFTILQRMIELPYCQPNVYTYSILIKA 212

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +    + ++  YE+     I P+  T  I++S YG+AG Y++M  V+  M   T    
Sbjct: 213 CVDASRFDLVDSLYEQMAERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLSGMLESTDSRP 272

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N ++  F N G+++ ++  + +    G++P++ T   LI+AY +  M+
Sbjct: 273 DIWTMNTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMY 325


>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510921|gb|AES92063.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  220 bits (561), Expect = 2e-55
 Identities = 102/183 (55%), Positives = 130/183 (71%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++  KF+ +  L EEM+   I+PNTVT+NI++ GYGKAG F +ME VL  ML S  C P
Sbjct: 219 CVDIFKFELIELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKP 278

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVM
Sbjct: 279 DVWTMNTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM 338

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF   G+ K ++  FNQM  +G++ D+ T C LI  +A A
Sbjct: 339 EYMRKLQFPWTTSTYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANA 398

Query: 546 NMF 554
            +F
Sbjct: 399 GLF 401



 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 53/168 (31%), Positives = 81/168 (48%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F  
Sbjct: 304 EKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFAE 362

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  + +  + G+  D +TF  LI  +  AGL+ K+ S ++   K  +P  TA 
Sbjct: 363 AGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAAKLEIPLNTAF 422

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN V+ A     ++ ++D VF +M       D  T   ++ AY +  M
Sbjct: 423 YNAVLSACAKAEDLMEMDRVFMRMKDTQCPLDDTTYSIMVEAYRKEGM 470



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L   M   G  P       L+  Y ++    E  ++L EM     C PDV+T + +I+ 
Sbjct: 159 QLFTAMIEEGCDPTPELYTALLAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKA 218

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +  + E +E  YE+     I P+  T  I+++ YG+AG++D+M  V+  M        
Sbjct: 219 CVDIFKFELIELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKP 278

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N +I  F N G+I  ++  + +    G++P++ T   LI +Y +  M+
Sbjct: 279 DVWTMNTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMY 331


>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2750; Flags: Precursor
           gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
           [Arabidopsis thaliana] gi|20466300|gb|AAM20467.1|
           unknown protein [Arabidopsis thaliana]
           gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis
           thaliana] gi|332640870|gb|AEE74391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 486

 Score =  220 bits (560), Expect = 2e-55
 Identities = 101/183 (55%), Positives = 132/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  L +EM    I PNTVT+NI++ GYG+ GRF +ME VL +ML S +C P
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 264

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVM
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM 324

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 325 EYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 384

Query: 546 NMF 554
            +F
Sbjct: 385 GLF 387



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
 Frame = +3

Query: 21  KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTM 200
           K   +    E+    GI P T T NILI  YGK   + +M +V+  M   E      WT 
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF----PWTT 336

Query: 201 ---NNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEY 371
              NN+I  F + G+ + ME  +++  + G++ D +TF  LI+ Y  AGL+ K+ S ++ 
Sbjct: 337 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 396

Query: 372 MHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
             K  +P  TA YN VI A     ++ +++ V+ +M       DS T   ++ AY +  M
Sbjct: 397 AAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGM 456



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 40/173 (23%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L +EM   G+ P       L+  Y ++    +  ++L +M +   C PDV+T + +++ 
Sbjct: 145 KLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKA 204

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPW 395
             +  + + ++  Y++ +   I P+  T  I++S YG+ G +D+M  V+ + +  T+   
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 264

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I  ++  + +    G++P++ T   LI +Y +  M+
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317


>ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
           gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 486

 Score =  220 bits (560), Expect = 2e-55
 Identities = 101/183 (55%), Positives = 132/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  L +EM    I PNTVT+NI++ GYG+ GRF +ME VL +ML S +C P
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 264

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVM
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM 324

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 325 EYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 384

Query: 546 NMF 554
            +F
Sbjct: 385 GLF 387



 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
 Frame = +3

Query: 21  KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTM 200
           K   +    E+    GI P T T NILI  YGK   + +M +V+  M   E      WT 
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF----PWTT 336

Query: 201 ---NNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEY 371
              NN+I  F + G+ + ME  +++  + G++ D +TF  LI+ Y  AGL+ K+ S ++ 
Sbjct: 337 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 396

Query: 372 MHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
             K  +P  TA YN VI A     ++ +++ V+ +M       DS T   ++ AY +  M
Sbjct: 397 AAKFEIPENTAFYNAVIAACAKADDLIEMERVYTRMKERQCVCDSRTFEIMVEAYEKEGM 456



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 40/173 (23%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L +EM   G+ P       L+  Y ++    +  ++L  M     C PDV+T + +++ 
Sbjct: 145 KLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKA 204

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPW 395
             +  + + ++  Y++ +   I P+  T  I++S YG+ G +D+M  V+ + +  T+   
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 264

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I  ++  + +    G++P++ T   LI +Y +  M+
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  220 bits (560), Expect = 2e-55
 Identities = 101/183 (55%), Positives = 134/183 (73%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F+ V  L +EM    I PNTVT+NI++ GYGKAG + +ME VL  ML S  C P
Sbjct: 211 CVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMERVLSGMLESTECKP 270

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN+G+I+ MEKWYEKF ++GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 271 DVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVM 330

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           E+M K   PWTT+TYN VI AF   G++K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 331 EFMRKLQFPWTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANA 390

Query: 546 NMF 554
            +F
Sbjct: 391 GLF 393



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/168 (32%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+  + GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F  
Sbjct: 296 EKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EFMRKLQFPWTTSTYNNVIEAFAV 354

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+++ ME  +++    G++ D +TF  LI+ Y  AGL+ K+ S ++   K  +P  T  
Sbjct: 355 AGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLATKFEIPENTTF 414

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN +I A     ++ +++ VF +M  +  +PDS T   ++ AY    M
Sbjct: 415 YNAIISACAKAEDLMEMERVFKRMKDNQCQPDSTTYSIMVEAYKREGM 462



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L +EM   GI P       L+  Y +     E  ++L +M T   C+PDV+T + +++ 
Sbjct: 151 QLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFSILQQMKTLPRCLPDVYTYSTLLKA 210

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +    E +E  Y++     I P+  T  I++S YG+AG+YD+M  V+  M   T    
Sbjct: 211 CVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMERVLSGMLESTECKP 270

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I  ++  + +    G++P++ T   LI AY +  M+
Sbjct: 271 DVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAYGKKRMY 323


>gb|ESW26448.1| hypothetical protein PHAVU_003G120600g [Phaseolus vulgaris]
          Length = 493

 Score =  219 bits (559), Expect = 3e-55
 Identities = 100/183 (54%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++A KF  V  L EEM+   + PNTVT+NI++ GYGKAG+F +ME VL  ML S +C P
Sbjct: 209 CVDAFKFDLVELLYEEMAERSVTPNTVTQNIVLGGYGKAGKFDQMEKVLSSMLESTTCKP 268

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 269 DVWTMNTIISVFGNIGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 328

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM +   PWTT+T+N VI AF + G+++ ++  F+QM  +G+K D+ T C LI  YA A
Sbjct: 329 EYMRRLQFPWTTSTFNNVIEAFADAGDVRHMECTFDQMRAEGMKADTKTFCCLIKGYANA 388

Query: 546 NMF 554
            +F
Sbjct: 389 GLF 391



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 54/168 (32%), Positives = 85/168 (50%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 294 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRRLQFPWTTSTFNNVIEAFAD 352

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G++  ME  +++    G++ D +TF  LI  Y  AGL+ K+ S +    K  +P   A 
Sbjct: 353 AGDVRHMECTFDQMRAEGMKADTKTFCCLIKGYANAGLFHKVISSVHLAGKFEIPQNIAF 412

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN V+ A     ++ +++ V+ +M  +  +PD  T   +I AY + NM
Sbjct: 413 YNAVLSACAKAEDLMEMERVYKRMKDNQCQPDETTYMIMIEAYKKDNM 460



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  ++L EM     C PDV+T + +I+V
Sbjct: 149 QLFTTMIEEGLEPTPHLYTALLAAYCRSNLIDEAFSILNEMKKLPLCQPDVFTYSTLIKV 208

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM-HKTSLPW 395
             +  + + +E  YE+     + P+  T  I++  YG+AG +D+M  V+  M   T+   
Sbjct: 209 CVDAFKFDLVELLYEEMAERSVTPNTVTQNIVLGGYGKAGKFDQMEKVLSSMLESTTCKP 268

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N +I  F N G+I  ++  + +    G++P++ T   LI AY +  M+
Sbjct: 269 DVWTMNTIISVFGNIGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 321


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  219 bits (559), Expect = 3e-55
 Identities = 100/183 (54%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++ S+F+ V  L EEM+   I PNTVT+NI++ GYGK G++ +ME VL+ ML S +C P
Sbjct: 223 CVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRP 282

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN+G IE ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 283 DVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 342

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F QM  +G++ D+ T C LIN YA A
Sbjct: 343 EYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANA 402

Query: 546 NMF 554
            +F
Sbjct: 403 GLF 405



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 55/168 (32%), Positives = 85/168 (50%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 308 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFAD 366

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +E+    G+  D +TF  LI+ Y  AGL+ K+   ++   K  +P  T+ 
Sbjct: 367 VGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSF 426

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN VI A     ++ ++D VF +M     +PD+ T   ++ AY +  M
Sbjct: 427 YNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGM 474



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
 Frame = +3

Query: 99  LIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETY 278
           L+  Y +     +  + L  M T   C PDV+T + +I+   +    E +E  YE+    
Sbjct: 183 LLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAER 242

Query: 279 GIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPWTTATYNVVIHAFKNTGEIKQ 455
            I P+  T  I++S YG+ G YD+M  V+   +  T+      T N+++  F N G I+ 
Sbjct: 243 LITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEM 302

Query: 456 IDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
           ++  + +    G++P++ T   LI AY +  M+
Sbjct: 303 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMY 335


>ref|XP_006297445.1| hypothetical protein CARUB_v10013468mg, partial [Capsella rubella]
           gi|482566154|gb|EOA30343.1| hypothetical protein
           CARUB_v10013468mg, partial [Capsella rubella]
          Length = 515

 Score =  219 bits (558), Expect = 3e-55
 Identities = 100/183 (54%), Positives = 132/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C+++S+F  V  L +EM    I PNTVT+NI++ GYG+ GRF +ME VL +ML S +C P
Sbjct: 233 CVDSSQFDLVDSLYKEMDERMITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 292

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVM
Sbjct: 293 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVM 352

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 353 EYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 412

Query: 546 NMF 554
            +F
Sbjct: 413 GLF 415



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
 Frame = +3

Query: 21  KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTM 200
           K   +    E+    GI P T T NILI  YGK   + +M +V+  M   E      WT 
Sbjct: 309 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF----PWTT 364

Query: 201 ---NNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEY 371
              NN+I  F + G+ + ME  +++  + G++ D +TF  LI+ Y  AGL+ K+ S ++ 
Sbjct: 365 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 424

Query: 372 MHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
             K  +P  T+ YN VI A     ++ +++ V+ +M       DS T   ++ AY +  M
Sbjct: 425 AAKFEIPENTSFYNAVIAACAKADDLIEMERVYTRMKERQCVCDSRTFEIMVEAYEKEGM 484



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/173 (23%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
 Frame = +3

Query: 39  ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRV 218
           +L +EM   G+ P       L+  Y ++       +VL +M +   C PDV+T + +++ 
Sbjct: 173 KLFDEMLDEGLEPTAELYTALLAAYTRSNLIDGAFSVLDKMKSLPRCQPDVFTYSTLLKA 232

Query: 219 FGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPW 395
             +  + + ++  Y++ +   I P+  T  I++S YG+ G +D+M  V+ + +  T+   
Sbjct: 233 CVDSSQFDLVDSLYKEMDERMITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 292

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I  ++  + +    G++P++ T   LI +Y +  M+
Sbjct: 293 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 345


>gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 491

 Score =  218 bits (555), Expect = 8e-55
 Identities = 101/183 (55%), Positives = 133/183 (72%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  L  EM    I PNTVT+NI++ GYGKAG+F++ME VL  ML S +  P
Sbjct: 218 CVDASRFDLVESLYGEMEERLITPNTVTQNIVLSGYGKAGKFEQMEKVLSGMLESSASKP 277

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ VFGN+G+I+ ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVM
Sbjct: 278 DVWTMNIILSVFGNKGQIDMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM 337

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K D+ T C LIN YA A
Sbjct: 338 EYMRKLQFPWTTSTYNNVIEAFADVGDAKHMEYTFDQMRAEGMKADTKTFCCLINGYANA 397

Query: 546 NMF 554
            +F
Sbjct: 398 GLF 400



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/168 (32%), Positives = 87/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M +V+ E +          T NNVI  F +
Sbjct: 303 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFAD 361

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  +++    G++ D +TF  LI+ Y  AGL+ K+ S ++   K  +P  T+ 
Sbjct: 362 VGDAKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKLEIPENTSF 421

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           YN VI A     ++ +++ VF +M     +P+S T   ++ AY +  M
Sbjct: 422 YNAVISACAKAEDLMEMERVFKRMKDKQCQPNSMTFSIMVEAYRKEGM 469


>gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
          Length = 588

 Score =  218 bits (555), Expect = 8e-55
 Identities = 99/183 (54%), Positives = 134/183 (73%)
 Frame = +3

Query: 6   CLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIP 185
           C++AS+F  V  + ++M+   I PNTVT+NI++ GYG+AGR  +ME VL  ML S +  P
Sbjct: 228 CVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKP 287

Query: 186 DVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVM 365
           DVWTMN ++ +FGNRG+IE+MEKWYEKF  YGIEP+ RT  ILI +YG+  +YDKM++VM
Sbjct: 288 DVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVM 347

Query: 366 EYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEA 545
           EYM K + PWTTAT+N VI AF + G+ K ++  FNQM  +G+KPD+ T C LIN +  A
Sbjct: 348 EYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNA 407

Query: 546 NMF 554
            +F
Sbjct: 408 GLF 410



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 52/168 (30%), Positives = 86/168 (51%)
 Frame = +3

Query: 48  EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGN 227
           E+    GI P T T NILI  YGK   + +M  V+ E +   +      T NNVI  F +
Sbjct: 313 EKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVM-EYMRKLAFPWTTATFNNVIEAFAD 371

Query: 228 RGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTAT 407
            G+ + ME  + +    G++PD +TF  LI+ +G AGL+ K+  +++   +  +P  T  
Sbjct: 372 AGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTF 431

Query: 408 YNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANM 551
           +N V+ A     ++ +++ VF +M      PD+ T   L+ AY +  M
Sbjct: 432 HNAVLMACVKAEDLMEMERVFMRMKQIQCVPDATTYSILVGAYRKEGM 479



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
 Frame = +3

Query: 42  LLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVF 221
           L +EM   G  P       LI  Y + G   +   +L +M  S  C PDV+T + +I+  
Sbjct: 169 LFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKAC 228

Query: 222 GNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYM--HKTSLPW 395
            +    + ++  Y+      I P+  T  I++S YG+AG  D M  V+  M    TS P 
Sbjct: 229 VDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKP- 287

Query: 396 TTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 554
              T N+++  F N G+I+ ++  + +    G++P++ T   LI AY +  M+
Sbjct: 288 DVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMY 340