BLASTX nr result

ID: Ephedra28_contig00004257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004257
         (1889 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828169.1| hypothetical protein AMTR_s00023p00112140 [A...    71   1e-09
ref|XP_002526707.1| Protein SCAR2, putative [Ricinus communis] g...    66   5e-08
ref|XP_006429515.1| hypothetical protein CICLE_v10010899mg [Citr...    65   1e-07
gb|EMJ07644.1| hypothetical protein PRUPE_ppa000141mg [Prunus pe...    64   2e-07
ref|XP_002309170.1| hypothetical protein POPTR_0006s10650g [Popu...    63   4e-07
gb|EOY07043.1| SCAR, putative isoform 4 [Theobroma cacao]              60   3e-06
gb|EOY07041.1| SCAR, putative isoform 2 [Theobroma cacao]              60   3e-06
gb|EOY07040.1| SCAR, putative isoform 1 [Theobroma cacao]              60   3e-06
ref|XP_002265561.2| PREDICTED: uncharacterized protein LOC100251...    59   1e-05
emb|CBI18083.3| unnamed protein product [Vitis vinifera]               59   1e-05
emb|CAN83781.1| hypothetical protein VITISV_027111 [Vitis vinifera]    59   1e-05

>ref|XP_006828169.1| hypothetical protein AMTR_s00023p00112140 [Amborella trichopoda]
            gi|548832816|gb|ERM95585.1| hypothetical protein
            AMTR_s00023p00112140 [Amborella trichopoda]
          Length = 1639

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
 Frame = -3

Query: 1227 VKKTPKVAESQSSSLPAVSKLGGSNKGPHSVGVGVN------WNDLLIKEIASHDRSKLN 1066
            ++  P ++ SQS    A SK+ G   G   +G  V         D LI+ +ASHDRSKL 
Sbjct: 1506 IEPIPNLSASQSEL--AESKMNG---GYLPLGFSVQRLKRGQQKDPLIEAVASHDRSKLK 1560

Query: 1065 KVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDVVKPKPEIKNNVSTM 886
            KV  +  S   Q  + ++ L++QI+T+SF LRP    R  I         P    NV+ +
Sbjct: 1561 KVTERCESGNRQKVNERDVLLEQIRTKSFNLRPTVATRPNI-------QVPTTNINVAAI 1613

Query: 885  LEKVNAIRQAMVG 847
            LEK NAIRQA  G
Sbjct: 1614 LEKANAIRQAFAG 1626


>ref|XP_002526707.1| Protein SCAR2, putative [Ricinus communis]
            gi|223534007|gb|EEF35729.1| Protein SCAR2, putative
            [Ricinus communis]
          Length = 1471

 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
 Frame = -3

Query: 1491 PCHSSSANSPSGNVEAKGEEDTSS---------------------GNIKPSTSCLSNSQG 1375
            P  ++ ANS  GN++ +G    +S                       ++PS   LS++  
Sbjct: 1212 PTVATDANSQQGNLQLEGTRSLNSYLGLPEISGKVPDDGFLASRRNPVEPSPDPLSSAVT 1271

Query: 1374 SNHNDKDSSPTPHYETKFEVSNPLCKDTGIE-RSSLNTXXXXXXXXLNWWVKKTPK--VA 1204
              H   ++ P P +  +   SN +  ++  E +  +N           +  K      V 
Sbjct: 1272 VEHAQTENDPEPSHGLQIRYSNQVTPESVSELKVPVNNLQSSEGEERKFSDKSASPQTVL 1331

Query: 1203 ESQ-----------------SSSLPAVSKLGGSN--KGPHSVGVGVNWNDLLIKEIASHD 1081
            E Q                 S +LP   ++G  N  K P          + LI  +A+HD
Sbjct: 1332 EDQYQQDLLSLHVETTWSASSLALPPTYEVGKPNGSKLPRP-------RNPLIDAVAAHD 1384

Query: 1080 RSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDVVKPKPEIKN 901
            +SKL KV  +           ++ L++QI+T+SF L+P AV R  I  + +  PK  +K 
Sbjct: 1385 KSKLRKVTERVHPQVGPKIDERDSLLEQIRTKSFNLKPTAVTRHSI--QGIQGPKTNLK- 1441

Query: 900  NVSTMLEKVNAIRQAMVG 847
             V+ +LEK NAIRQA+ G
Sbjct: 1442 -VAAILEKANAIRQALTG 1458


>ref|XP_006429515.1| hypothetical protein CICLE_v10010899mg [Citrus clementina]
            gi|568855072|ref|XP_006481134.1| PREDICTED: protein
            SCAR2-like [Citrus sinensis] gi|557531572|gb|ESR42755.1|
            hypothetical protein CICLE_v10010899mg [Citrus
            clementina]
          Length = 1511

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 36/291 (12%)
 Frame = -3

Query: 1611 DSTCRSYKLDEDLEKSL---GLDNLKVNNEVTHGLLKFSSATEPCHSSSANSPSGNVEAK 1441
            D    S KL   L +S    GL ++  N E  HG     SA  P       S +G V + 
Sbjct: 1218 DPVSSSEKLIHSLNQSASEPGLPHMSENFEGEHGNSSDKSALPPIKVEDTASKNGPVPSP 1277

Query: 1440 GE------EDTSSGNIKPSTSCLSNSQG-----------------SNHNDKDSSPTPHYE 1330
            G+      +  S  +++ ++  L+   G                 SN++   S   P + 
Sbjct: 1278 GKPIHLLNQSVSEPSLQHTSENLAREHGNPFDGSVLPPRNVEDAASNYDPVSSLEKPIHP 1337

Query: 1329 TKFEVSNPLCKDTGIERSSLNTXXXXXXXXLNWWVKKTPKVAESQSS----------SLP 1180
             K   S P  + T       +             V++ P    S S           +L 
Sbjct: 1338 LKQSASEPGLQHTSEISEEEHGNPSDTSVPPPRKVEEQPHRGLSSSEGKSTWPSNPFALL 1397

Query: 1179 AVSKLGGSNKGPHSVGVGVNWNDLLIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQ 1000
              S++G +N G  +V +    N L I  +A+HD+SKL KV  +     E     +  L++
Sbjct: 1398 TTSEVGHAN-GRSTVKLPRPRNPL-IDAVAAHDKSKLRKVTERVQPQSEPKVDERNSLLE 1455

Query: 999  QIKTQSFRLRPIAVKREEIVKEDVVKPKPEIKNNVSTMLEKVNAIRQAMVG 847
            QI+T+SF L+P  V R  I         P+    V+ +LEK NAIRQA  G
Sbjct: 1456 QIRTKSFNLKPALVSRPSI-------QGPKTNLRVAAILEKANAIRQATAG 1499


>gb|EMJ07644.1| hypothetical protein PRUPE_ppa000141mg [Prunus persica]
          Length = 1648

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = -3

Query: 1107 LIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDV 928
            LI  + +H +SKL KV  +     E     ++ L+QQI+T+SF L+P +V R+ + +  +
Sbjct: 1552 LIDAVTAHGQSKLRKVTERIRPQVEPKVDERDSLLQQIRTKSFNLKPASVTRQTVTRPSI 1611

Query: 927  VKPKPEIKNNVSTMLEKVNAIRQAMVG 847
              P   ++  V+ +LEK NAIRQA+ G
Sbjct: 1612 QGPTTNLR--VAAILEKANAIRQALTG 1636


>ref|XP_002309170.1| hypothetical protein POPTR_0006s10650g [Populus trichocarpa]
            gi|222855146|gb|EEE92693.1| hypothetical protein
            POPTR_0006s10650g [Populus trichocarpa]
          Length = 1465

 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 36/87 (41%), Positives = 52/87 (59%)
 Frame = -3

Query: 1107 LIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDV 928
            LI  +A+HD+SKL KVA             ++ L++QI+T+SF L+P  V R  I  + +
Sbjct: 1370 LIDAVAAHDKSKLRKVAELVRPQVGPKVEERDSLLEQIRTKSFNLKPATVTRPSI--QGI 1427

Query: 927  VKPKPEIKNNVSTMLEKVNAIRQAMVG 847
              PK  +K  V+ +LEK NAIRQA+ G
Sbjct: 1428 QGPKTNLK--VAAILEKANAIRQALTG 1452


>gb|EOY07043.1| SCAR, putative isoform 4 [Theobroma cacao]
          Length = 1218

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -3

Query: 1107 LIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDV 928
            LI  +A+HD+SKL KV  +           ++ L++QI+T+SF L+P AV R  I     
Sbjct: 1125 LIDAVAAHDKSKLRKVTERVRPPMIPKVDERDSLLEQIRTKSFNLKPAAVTRPSI----- 1179

Query: 927  VKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                P+    V+ +LEK NAIRQA+ G
Sbjct: 1180 --QGPKTNLRVAAILEKANAIRQALAG 1204


>gb|EOY07041.1| SCAR, putative isoform 2 [Theobroma cacao]
          Length = 1406

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -3

Query: 1107 LIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDV 928
            LI  +A+HD+SKL KV  +           ++ L++QI+T+SF L+P AV R  I     
Sbjct: 1313 LIDAVAAHDKSKLRKVTERVRPPMIPKVDERDSLLEQIRTKSFNLKPAAVTRPSI----- 1367

Query: 927  VKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                P+    V+ +LEK NAIRQA+ G
Sbjct: 1368 --QGPKTNLRVAAILEKANAIRQALAG 1392


>gb|EOY07040.1| SCAR, putative isoform 1 [Theobroma cacao]
          Length = 1471

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -3

Query: 1107 LIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKEDV 928
            LI  +A+HD+SKL KV  +           ++ L++QI+T+SF L+P AV R  I     
Sbjct: 1378 LIDAVAAHDKSKLRKVTERVRPPMIPKVDERDSLLEQIRTKSFNLKPAAVTRPSI----- 1432

Query: 927  VKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                P+    V+ +LEK NAIRQA+ G
Sbjct: 1433 --QGPKTNLRVAAILEKANAIRQALAG 1457


>ref|XP_002265561.2| PREDICTED: uncharacterized protein LOC100251663 [Vitis vinifera]
          Length = 1660

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = -3

Query: 1113 DLLIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKE 934
            D LI+ +ASHD+  L KV  +           ++ L++QI+ +SF L+P AV R  I   
Sbjct: 1566 DPLIEAVASHDKRTLRKVTERVRPQIGPKVDERDSLLEQIRAKSFNLKPAAVPRPSI--- 1622

Query: 933  DVVKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                  P     V+ MLEK NAIRQA+ G
Sbjct: 1623 ----QGPRTNLKVAAMLEKANAIRQALAG 1647


>emb|CBI18083.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = -3

Query: 1113 DLLIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKE 934
            D LI+ +ASHD+  L KV  +           ++ L++QI+ +SF L+P AV R  I   
Sbjct: 48   DPLIEAVASHDKRTLRKVTERVRPQIGPKVDERDSLLEQIRAKSFNLKPAAVPRPSI--- 104

Query: 933  DVVKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                  P     V+ MLEK NAIRQA+ G
Sbjct: 105  ----QGPRTNLKVAAMLEKANAIRQALAG 129


>emb|CAN83781.1| hypothetical protein VITISV_027111 [Vitis vinifera]
          Length = 1660

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = -3

Query: 1113 DLLIKEIASHDRSKLNKVARKASSFKEQSSHNKEELIQQIKTQSFRLRPIAVKREEIVKE 934
            D LI+ +ASHD+  L KV  +           ++ L++QI+ +SF L+P AV R  I   
Sbjct: 1566 DPLIEAVASHDKRTLRKVTERVRPQIGPKVDERDSLLEQIRAKSFNLKPAAVPRPSI--- 1622

Query: 933  DVVKPKPEIKNNVSTMLEKVNAIRQAMVG 847
                  P     V+ MLEK NAIRQA+ G
Sbjct: 1623 ----QGPRTNLKVAAMLEKANAIRQALAG 1647


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