BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004020
         (1870 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC84682.1| putative histone H1 [Pinus pinaster]                   98   1e-17
dbj|BAE92289.1| putative histone H1 [Cryptomeria japonica]             98   1e-17
gb|ABK24501.1| unknown [Picea sitchensis]                              96   7e-17
gb|AFG44118.1| hypothetical protein CL593Contig1_05, partial [Pi...    93   5e-16
gb|AEW08577.1| hypothetical protein CL593Contig1_05, partial [Pi...    92   6e-16
ref|XP_001764980.1| predicted protein [Physcomitrella patens] gi...    91   2e-15
ref|XP_002962664.1| hypothetical protein SELMODRAFT_438299 [Sela...    88   1e-14
ref|XP_002980428.1| hypothetical protein SELMODRAFT_419956 [Sela...    88   1e-14
ref|XP_001757287.1| histone H1 linker [Physcomitrella patens] gi...    88   1e-14
ref|XP_006420120.1| hypothetical protein CICLE_v10005932mg [Citr...    86   4e-14
ref|XP_001758575.1| histone H1 linker [Physcomitrella patens] gi...    86   4e-14
ref|XP_001752188.1| histone H1 linker [Physcomitrella patens] gi...    84   3e-13
gb|ACU21235.1| unknown [Glycine max]                                   83   4e-13
gb|ACN41152.1| unknown [Picea sitchensis]                              83   4e-13
gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum]         83   5e-13
gb|ADE76482.1| unknown [Picea sitchensis]                              83   5e-13
ref|XP_006838842.1| hypothetical protein AMTR_s00002p00264270 [A...    82   6e-13
gb|AFW67336.1| putative histone H1/H5 domain family protein [Zea...    82   6e-13
ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833...    82   6e-13
ref|XP_003518887.1| PREDICTED: histone H1-like [Glycine max]           82   8e-13

>emb|CAC84682.1| putative histone H1 [Pinus pinaster]
          Length = 245

 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           + QMI+EAI ALKER GSSP+AIAKFLSEKYKSDLPP FKK +NVQL+N+   GK+ KVK
Sbjct: 60  YFQMISEAIVALKERGGSSPYAIAKFLSEKYKSDLPPVFKKKLNVQLRNLTNSGKLTKVK 119

Query: 679 GSFKL 665
           GS+KL
Sbjct: 120 GSYKL 124


>dbj|BAE92289.1| putative histone H1 [Cryptomeria japonica]
          Length = 243

 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           ++QMI EAI ALKER GSSP+AIAKFL +KYK+DLPP FKK +NVQLKN+ K GK+ KVK
Sbjct: 57  YVQMIAEAITALKERGGSSPYAIAKFLGDKYKADLPPNFKKQLNVQLKNLTKSGKLTKVK 116

Query: 679 GSFKLPKP 656
            S+KL  P
Sbjct: 117 ASYKLTAP 124


>gb|ABK24501.1| unknown [Picea sitchensis]
          Length = 239

 Score = 95.5 bits (236), Expect = 7e-17
 Identities = 46/65 (70%), Positives = 55/65 (84%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           + QMI+EAI ALKER GSSP+AIAKF+SEKYKSDLPP FKK + VQL+N+   GK+ KVK
Sbjct: 60  YFQMISEAITALKERGGSSPYAIAKFMSEKYKSDLPPVFKKKLTVQLRNLTNSGKLTKVK 119

Query: 679 GSFKL 665
           GS+KL
Sbjct: 120 GSYKL 124


>gb|AFG44118.1| hypothetical protein CL593Contig1_05, partial [Pinus taeda]
           gi|383126994|gb|AFG44119.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383126995|gb|AFG44120.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383126996|gb|AFG44121.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383126997|gb|AFG44122.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383126998|gb|AFG44123.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383126999|gb|AFG44124.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127000|gb|AFG44125.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127001|gb|AFG44126.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127002|gb|AFG44127.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127003|gb|AFG44128.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127004|gb|AFG44129.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127005|gb|AFG44130.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127006|gb|AFG44131.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127007|gb|AFG44132.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127008|gb|AFG44133.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
           gi|383127009|gb|AFG44134.1| hypothetical protein
           CL593Contig1_05, partial [Pinus taeda]
          Length = 65

 Score = 92.8 bits (229), Expect = 5e-16
 Identities = 43/65 (66%), Positives = 55/65 (84%)
 Frame = -1

Query: 865 VFWLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVK 686
           + +LQM+TEAI ALKER GSS +AIAKF+ +KYKSDLPP+FKK +NVQL+N+   GK+ K
Sbjct: 1   MLYLQMVTEAITALKERGGSSTYAIAKFIGDKYKSDLPPSFKKKLNVQLRNLTSSGKITK 60

Query: 685 VKGSF 671
           VKGS+
Sbjct: 61  VKGSY 65


>gb|AEW08577.1| hypothetical protein CL593Contig1_05, partial [Pinus radiata]
          Length = 65

 Score = 92.4 bits (228), Expect = 6e-16
 Identities = 43/65 (66%), Positives = 55/65 (84%)
 Frame = -1

Query: 865 VFWLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVK 686
           + +LQM+TEAI ALKER GSS +AIAKF+ +KYKSDLPP+FKK +NVQL+N+   GK+ K
Sbjct: 1   MLYLQMVTEAITALKERGGSSTYAIAKFIGDKYKSDLPPSFKKKLNVQLRNLSSSGKITK 60

Query: 685 VKGSF 671
           VKGS+
Sbjct: 61  VKGSY 65


>ref|XP_001764980.1| predicted protein [Physcomitrella patens]
           gi|162683789|gb|EDQ70196.1| predicted protein
           [Physcomitrella patens]
          Length = 292

 Score = 90.9 bits (224), Expect = 2e-15
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +L M+ EAIGALKERTGSS +AIAK+L +KYK+ LPP FKK + +QL+N+ K GK+VKVK
Sbjct: 63  YLLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLPPNFKKTLTIQLRNLTKSGKLVKVK 122

Query: 679 GSFKL 665
            SFKL
Sbjct: 123 NSFKL 127


>ref|XP_002962664.1| hypothetical protein SELMODRAFT_438299 [Selaginella moellendorffii]
           gi|300169525|gb|EFJ36127.1| hypothetical protein
           SELMODRAFT_438299 [Selaginella moellendorffii]
          Length = 236

 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 56/75 (74%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +++M+ EAI  LKERTGSS HAIAK+L EKY S LP +FK+ +++QLK++   GK+ KVK
Sbjct: 62  YVEMVMEAISFLKERTGSSQHAIAKYLVEKYSSGLPTSFKRMLSIQLKSLSNSGKITKVK 121

Query: 679 GSFKLPKPAGSSTGS 635
            SFKLP  A S + S
Sbjct: 122 NSFKLPSSASSKSSS 136


>ref|XP_002980428.1| hypothetical protein SELMODRAFT_419956 [Selaginella moellendorffii]
           gi|300152044|gb|EFJ18688.1| hypothetical protein
           SELMODRAFT_419956 [Selaginella moellendorffii]
          Length = 225

 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 56/75 (74%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +++M+ EAI  LKERTGSS HAIAK+L EKY S LP +FK+ +++QLK++   GK+ KVK
Sbjct: 62  YVEMVMEAISFLKERTGSSQHAIAKYLVEKYSSGLPTSFKRMLSIQLKSLSNSGKITKVK 121

Query: 679 GSFKLPKPAGSSTGS 635
            SFKLP  A S + S
Sbjct: 122 NSFKLPSSASSKSSS 136


>ref|XP_001757287.1| histone H1 linker [Physcomitrella patens]
           gi|162691410|gb|EDQ77772.1| histone H1 linker
           [Physcomitrella patens]
          Length = 285

 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 43/65 (66%), Positives = 52/65 (80%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +L M TEAI ALKERTGSS +AIAK+L +KYK+ LPP FKK +  QL+N+ K GK+VKVK
Sbjct: 78  YLLMATEAIAALKERTGSSQYAIAKYLEDKYKTGLPPNFKKMLTTQLRNLTKAGKLVKVK 137

Query: 679 GSFKL 665
            SFKL
Sbjct: 138 NSFKL 142


>ref|XP_006420120.1| hypothetical protein CICLE_v10005932mg [Citrus clementina]
           gi|557521993|gb|ESR33360.1| hypothetical protein
           CICLE_v10005932mg [Citrus clementina]
          Length = 199

 Score = 86.3 bits (212), Expect = 4e-14
 Identities = 45/73 (61%), Positives = 55/73 (75%)
 Frame = -1

Query: 853 QMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVKGS 674
           +MI EAI ALKERTGSS  AIAKF+ EK K++LP  FKK + VQLK ++  GK+VKVK S
Sbjct: 33  EMINEAITALKERTGSSQFAIAKFIEEKQKANLPNNFKKLLLVQLKKLVANGKLVKVKNS 92

Query: 673 FKLPKPAGSSTGS 635
           FKLP  + SST +
Sbjct: 93  FKLPPKSSSSTAA 105


>ref|XP_001758575.1| histone H1 linker [Physcomitrella patens]
           gi|162690185|gb|EDQ76553.1| histone H1 linker
           [Physcomitrella patens]
          Length = 265

 Score = 86.3 bits (212), Expect = 4e-14
 Identities = 41/65 (63%), Positives = 53/65 (81%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           ++ M+ EAIGALKERTGSS +AIAK+L +KYK+ L P FKK + +QL+N+ K GK+VKVK
Sbjct: 74  YMLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLAPNFKKMLTIQLRNLTKGGKLVKVK 133

Query: 679 GSFKL 665
            SFKL
Sbjct: 134 NSFKL 138


>ref|XP_001752188.1| histone H1 linker [Physcomitrella patens]
           gi|162696583|gb|EDQ82921.1| histone H1 linker
           [Physcomitrella patens]
          Length = 270

 Score = 83.6 bits (205), Expect = 3e-13
 Identities = 39/65 (60%), Positives = 52/65 (80%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           ++ M+ EAIGALKERTGSS +AIAK+L +KY + LPP F+K ++ QL+N+ K  K+VKVK
Sbjct: 71  YMMMVVEAIGALKERTGSSQYAIAKYLEDKYNTGLPPNFEKTLSTQLRNLSKAEKLVKVK 130

Query: 679 GSFKL 665
            SFKL
Sbjct: 131 NSFKL 135


>gb|ACU21235.1| unknown [Glycine max]
          Length = 164

 Score = 83.2 bits (204), Expect = 4e-13
 Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = -1

Query: 853 QMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVKGS 674
           +MI +AI +LKERTGSS HAIAKF+ EK+K  LPP F+K +   LK ++  GK+VKVKGS
Sbjct: 60  EMIKDAITSLKERTGSSQHAIAKFIEEKHKQ-LPPNFRKLLLYHLKKLVAAGKLVKVKGS 118

Query: 673 FKLP--KPAGSSTGS 635
           FKLP  +P+ SS+ S
Sbjct: 119 FKLPPTRPSASSSSS 133


>gb|ACN41152.1| unknown [Picea sitchensis]
          Length = 224

 Score = 83.2 bits (204), Expect = 4e-13
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +LQMITEAI +LKERTGSS +AI+ ++S KY+S LP  FKK + VQL+N+ K GK+ KVK
Sbjct: 36  YLQMITEAITSLKERTGSSQYAISAYISSKYQSHLPANFKKILTVQLRNLAKSGKLTKVK 95

Query: 679 GSFKL 665
            SFKL
Sbjct: 96  NSFKL 100


>gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum aestivum]
          Length = 275

 Score = 82.8 bits (203), Expect = 5e-13
 Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 6/75 (8%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           + +M++EAI ALKERTGSSP+AIAKF+ +K+K+ LP  F+K ++VQLK ++  GK+ KVK
Sbjct: 64  YAEMVSEAITALKERTGSSPYAIAKFVEDKHKAHLPANFRKILSVQLKKLVASGKLTKVK 123

Query: 679 GSFKL------PKPA 653
            S+KL      PKPA
Sbjct: 124 ASYKLSAAAAKPKPA 138


>gb|ADE76482.1| unknown [Picea sitchensis]
          Length = 224

 Score = 82.8 bits (203), Expect = 5e-13
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +LQMITEAI +LKERTGSS +AIA ++  KY+S LP  FKK + VQL+N+ K GK+ KVK
Sbjct: 36  YLQMITEAITSLKERTGSSQYAIAAYIGSKYQSKLPANFKKLLTVQLRNLAKSGKLTKVK 95

Query: 679 GSFKL 665
            SFKL
Sbjct: 96  SSFKL 100


>ref|XP_006838842.1| hypothetical protein AMTR_s00002p00264270 [Amborella trichopoda]
           gi|548841348|gb|ERN01411.1| hypothetical protein
           AMTR_s00002p00264270 [Amborella trichopoda]
          Length = 242

 Score = 82.4 bits (202), Expect = 6e-13
 Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           +++MITE+I +LKERTGSS +AI KF+ +KYKS LPPTFKK +   LK ++  GK+ KVK
Sbjct: 52  YIEMITESIVSLKERTGSSQYAITKFIEDKYKSHLPPTFKKLLLYNLKRLVAQGKLTKVK 111

Query: 679 GSFKL---PKPAGS 647
            SFKL    KPA +
Sbjct: 112 SSFKLAPTAKPAAA 125


>gb|AFW67336.1| putative histone H1/H5 domain family protein [Zea mays]
          Length = 211

 Score = 82.4 bits (202), Expect = 6e-13
 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
 Frame = -1

Query: 853 QMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVKGS 674
           QM++EAI +LKERTGSS  AIAKFL +K+K  LPP F+K +NVQLK ++  GK+ KVK S
Sbjct: 5   QMVSEAIASLKERTGSSSFAIAKFLEDKHKDKLPPNFRKLLNVQLKKLVAGGKLTKVKNS 64

Query: 673 FKL-----PKPAGSST 641
           +KL     PK A   T
Sbjct: 65  YKLSSATKPKAAPKKT 80


>ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833820 [Brachypodium
           distachyon]
          Length = 297

 Score = 82.4 bits (202), Expect = 6e-13
 Identities = 38/66 (57%), Positives = 52/66 (78%)
 Frame = -1

Query: 859 WLQMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVK 680
           + +M++EAI  LKERTGSS +AIAKF+ EK+K+ LPP F+K + VQLK ++  GK+ KVK
Sbjct: 62  YAEMVSEAISTLKERTGSSQYAIAKFVEEKHKAHLPPNFRKLLLVQLKKLVAAGKLTKVK 121

Query: 679 GSFKLP 662
            S+KLP
Sbjct: 122 SSYKLP 127


>ref|XP_003518887.1| PREDICTED: histone H1-like [Glycine max]
          Length = 302

 Score = 82.0 bits (201), Expect = 8e-13
 Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = -1

Query: 853 QMITEAIGALKERTGSSPHAIAKFLSEKYKSDLPPTFKKHINVQLKNMIKLGKVVKVKGS 674
           +MI +AI +LKE+TGSS HAIAKF+ EK+K  LPP F+K +   LK ++  GK+VKVKGS
Sbjct: 60  EMIKDAITSLKEKTGSSQHAIAKFIEEKHKQ-LPPNFRKLLLYHLKKLVAAGKLVKVKGS 118

Query: 673 FKLP--KPAGSSTGS 635
           FKLP  +P+ SS+ S
Sbjct: 119 FKLPPTRPSASSSSS 133