BLASTX nr result

ID: Ephedra28_contig00004005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00004005
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25944.1| unknown [Picea sitchensis] gi|148907626|gb|ABR169...    55   7e-06
ref|XP_006855105.1| hypothetical protein AMTR_s00031p00192520 [A...    55   1e-05

>gb|ABK25944.1| unknown [Picea sitchensis] gi|148907626|gb|ABR16942.1| unknown
           [Picea sitchensis] gi|224285396|gb|ACN40421.1| unknown
           [Picea sitchensis]
          Length = 208

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -1

Query: 108 MVTANKEMAVYCFDTLVAHYTSEIAPPAA 22
           MV+ANKEM VYCFDTLVAHYTSE+ PP A
Sbjct: 1   MVSANKEMVVYCFDTLVAHYTSELVPPPA 29


>ref|XP_006855105.1| hypothetical protein AMTR_s00031p00192520 [Amborella trichopoda]
           gi|548858834|gb|ERN16572.1| hypothetical protein
           AMTR_s00031p00192520 [Amborella trichopoda]
          Length = 210

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -1

Query: 108 MVTANKEMAVYCFDTLVAHYTSEIAPPAA 22
           MV+ANKEM VYCFDTLVAHYTSE APP A
Sbjct: 1   MVSANKEMVVYCFDTLVAHYTSEQAPPPA 29


Top