BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003830
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation...    81   2e-13
gb|ABK25119.1| unknown [Picea sitchensis]                              80   3e-13
gb|EXC18772.1| Eukaryotic translation initiation factor 3 subuni...    80   4e-13
ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    80   4e-13
ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation...    79   5e-13
ref|XP_006855977.1| hypothetical protein AMTR_s00037p00235640 [A...    77   3e-12
gb|EMJ09256.1| hypothetical protein PRUPE_ppa002067mg [Prunus pe...    76   5e-12
ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation...    75   9e-12
ref|XP_006371769.1| Eukaryotic translation initiation factor 3 s...    75   1e-11
ref|XP_006495404.1| PREDICTED: eukaryotic translation initiation...    74   2e-11
ref|XP_006483512.1| PREDICTED: eukaryotic translation initiation...    74   2e-11
ref|XP_006450239.1| hypothetical protein CICLE_v100076091mg, par...    74   2e-11
ref|NP_568498.1| translation initiation factor 3 subunit B [Arab...    74   2e-11
sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation ini...    74   2e-11
ref|XP_006354613.1| PREDICTED: eukaryotic translation initiation...    74   2e-11
gb|ESW08904.1| hypothetical protein PHAVU_009G0841000g, partial ...    74   2e-11
ref|NP_001031954.1| translation initiation factor 3 subunit B [A...    74   2e-11
ref|XP_004501412.1| PREDICTED: eukaryotic translation initiation...    74   3e-11
ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation...    73   3e-11
ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation...    73   3e-11

>ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID S+VD D+IRLPPG+DFGI                 GFGNIIVVDNLPVVPPEKFEKL
Sbjct: 19  IDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGNIIVVDNLPVVPPEKFEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>gb|ABK25119.1| unknown [Picea sitchensis]
          Length = 724

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = +3

Query: 270 NSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVP 449
           N +   +IDFS VDLDSI+LPPG+DFGI                 GFGNI+VVDNLPVVP
Sbjct: 17  NDIQQLNIDFSNVDLDSIQLPPGEDFGIKSEDEEEEEDSLEFET-GFGNIVVVDNLPVVP 75

Query: 450 PEKFEKLEG 476
           PEKFEKLEG
Sbjct: 76  PEKFEKLEG 84


>gb|EXC18772.1| Eukaryotic translation initiation factor 3 subunit B [Morus
           notabilis]
          Length = 714

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/76 (55%), Positives = 47/76 (61%)
 Frame = +3

Query: 249 MLALSEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVV 428
           ML    D++     ID S++D DSIRLPPG+DFGI                 GFGNIIVV
Sbjct: 5   MLMKEIDDTAASLGIDLSQIDFDSIRLPPGEDFGIKSDDEDVYRDENLEFDSGFGNIIVV 64

Query: 429 DNLPVVPPEKFEKLEG 476
           DNLPVVP EKFEKLEG
Sbjct: 65  DNLPVVPREKFEKLEG 80


>ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit B-like [Cucumis sativus]
          Length = 718

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/62 (62%), Positives = 43/62 (69%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID S+VD D+IRLPPG+DFGI                 GFGNIIVVDNLPVVPPEKF+KL
Sbjct: 19  IDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGNIIVVDNLPVVPPEKFDKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = +3

Query: 249 MLALSEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVV 428
           ML    ++S     ID S+VD D+IRLPPG++FGI                 GFGNIIVV
Sbjct: 5   MLMKEIEDSAGRLGIDLSQVDFDAIRLPPGENFGIISDDEEVLQEESLEFDSGFGNIIVV 64

Query: 429 DNLPVVPPEKFEKLEG 476
           DNLPVVPPEKFEKLEG
Sbjct: 65  DNLPVVPPEKFEKLEG 80


>ref|XP_006855977.1| hypothetical protein AMTR_s00037p00235640 [Amborella trichopoda]
           gi|548859798|gb|ERN17444.1| hypothetical protein
           AMTR_s00037p00235640 [Amborella trichopoda]
          Length = 719

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/82 (48%), Positives = 50/82 (60%)
 Frame = +3

Query: 228 AMAVQMPMLALSEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXG 407
           AM + +P   L   + + ++ ID S +DLDSI LPPGDDFGI                 G
Sbjct: 4   AMELPLPAHHLGSSSLIDVSKIDISNIDLDSIHLPPGDDFGI-PSDDDVVAEEELEFDSG 62

Query: 408 FGNIIVVDNLPVVPPEKFEKLE 473
           FG+II+VDNLPVV PEK+EKLE
Sbjct: 63  FGSIIIVDNLPVVAPEKYEKLE 84


>gb|EMJ09256.1| hypothetical protein PRUPE_ppa002067mg [Prunus persica]
          Length = 722

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/61 (62%), Positives = 42/61 (68%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID S++DLDSIRLPPG+DFGI                 GFGNIIVVDNLPVVP EK+EKL
Sbjct: 19  IDLSQLDLDSIRLPPGEDFGIISDDEDIYQEENSELDSGFGNIIVVDNLPVVPKEKYEKL 78

Query: 471 E 473
           E
Sbjct: 79  E 79


>ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Glycine max]
          Length = 718

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/71 (56%), Positives = 46/71 (64%)
 Frame = +3

Query: 264 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPV 443
           ED +L +  +D S +DLD+IRLPPG+D GI                 GFGNIIVVDNLPV
Sbjct: 11  EDTALRLG-VDLSTLDLDAIRLPPGEDCGIVSDDEVVYQEENLEFESGFGNIIVVDNLPV 69

Query: 444 VPPEKFEKLEG 476
           VP EKFEKLEG
Sbjct: 70  VPREKFEKLEG 80


>ref|XP_006371769.1| Eukaryotic translation initiation factor 3 subunit 9 family protein
           [Populus trichocarpa] gi|550317909|gb|ERP49566.1|
           Eukaryotic translation initiation factor 3 subunit 9
           family protein [Populus trichocarpa]
          Length = 718

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/62 (59%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID S++DLDSI+LPPGDDFGI                 G GN IVVDNLPVVP EKF+KL
Sbjct: 18  IDLSQIDLDSIQLPPGDDFGIISDDEDVYQEEQMDFDYGLGNTIVVDNLPVVPKEKFDKL 77

Query: 471 EG 476
           EG
Sbjct: 78  EG 79


>ref|XP_006495404.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Citrus sinensis]
          Length = 129

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/62 (61%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID  +VDLDSI+LPPG+D GI                 GFGNIIVVDNLPVVP EKFEKL
Sbjct: 19  IDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIVVDNLPVVPKEKFEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>ref|XP_006483512.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Citrus sinensis]
          Length = 712

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/62 (61%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID  +VDLDSI+LPPG+D GI                 GFGNIIVVDNLPVVP EKFEKL
Sbjct: 19  IDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIVVDNLPVVPKEKFEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>ref|XP_006450239.1| hypothetical protein CICLE_v100076091mg, partial [Citrus
           clementina] gi|557553465|gb|ESR63479.1| hypothetical
           protein CICLE_v100076091mg, partial [Citrus clementina]
          Length = 120

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/62 (61%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID  +VDLDSI+LPPG+D GI                 GFGNIIVVDNLPVVP EKFEKL
Sbjct: 19  IDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIVVDNLPVVPKEKFEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>ref|NP_568498.1| translation initiation factor 3 subunit B [Arabidopsis thaliana]
           gi|23396618|sp|Q9C5Z1.1|EIF3B_ARATH RecName:
           Full=Eukaryotic translation initiation factor 3 subunit
           B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName:
           Full=eIF3 p110; AltName: Full=p82
           gi|12407662|gb|AAG53615.1|AF285834_1 eukaryotic
           initiation factor 3B1 subunit [Arabidopsis thaliana]
           gi|14190411|gb|AAK55686.1|AF378883_1
           AT5g27640/F15A18_100 [Arabidopsis thaliana]
           gi|20857380|gb|AAM26716.1| AT5g27640/F15A18_100
           [Arabidopsis thaliana] gi|332006326|gb|AED93709.1|
           translation initiation factor 3 subunit B [Arabidopsis
           thaliana]
          Length = 712

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID+S+V+ DSI+LPPG+DFGI                 GFGNIIVVD+LPVVP EKFEKL
Sbjct: 15  IDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVVDHLPVVPKEKFEKL 74

Query: 471 EG 476
           EG
Sbjct: 75  EG 76


>sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3
           p110 gi|5911685|emb|CAA72721.1| PRT1 protein [Nicotiana
           tabacum]
          Length = 719

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           +D S++DLDSI LPPG+D GI                 GFGNI+VVDNLPVVP EKFEKL
Sbjct: 19  VDLSQIDLDSIHLPPGEDCGIPSDDDDLMEEDPLEFDAGFGNILVVDNLPVVPKEKFEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>ref|XP_006354613.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Solanum tuberosum]
          Length = 717

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           +D +++DLDSI LPPGDD GI                 GFGNI+VVDNLPVVP EK+EKL
Sbjct: 19  VDLTQIDLDSIHLPPGDDLGIPSDDEDLLEEDALEEDQGFGNILVVDNLPVVPKEKYEKL 78

Query: 471 EG 476
           EG
Sbjct: 79  EG 80


>gb|ESW08904.1| hypothetical protein PHAVU_009G0841000g, partial [Phaseolus
           vulgaris]
          Length = 567

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/71 (54%), Positives = 46/71 (64%)
 Frame = +3

Query: 264 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPV 443
           ED +L +  +D S +DLDS+RLPPG++ GI                 GFGNIIVVDNLPV
Sbjct: 11  EDTALRLG-LDLSTLDLDSVRLPPGENCGIVSDDDEVYQEDNLEFESGFGNIIVVDNLPV 69

Query: 444 VPPEKFEKLEG 476
           VP EKFEKLEG
Sbjct: 70  VPKEKFEKLEG 80


>ref|NP_001031954.1| translation initiation factor 3 subunit B [Arabidopsis thaliana]
           gi|332006327|gb|AED93710.1| translation initiation
           factor 3 subunit B [Arabidopsis thaliana]
          Length = 738

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID+S+V+ DSI+LPPG+DFGI                 GFGNIIVVD+LPVVP EKFEKL
Sbjct: 15  IDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVVDHLPVVPKEKFEKL 74

Query: 471 EG 476
           EG
Sbjct: 75  EG 76


>ref|XP_004501412.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cicer arietinum]
          Length = 719

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/82 (52%), Positives = 47/82 (57%)
 Frame = +3

Query: 231 MAVQMPMLALSEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGF 410
           MA  M M  + +  SL    ID S +DLDSI  PPG+D GI                 GF
Sbjct: 1   MADVMVMKEIEDKASLL--GIDLSTIDLDSIHFPPGEDCGIPSDDEDIYQEENLEFDSGF 58

Query: 411 GNIIVVDNLPVVPPEKFEKLEG 476
           GNIIVVDNLPVVP EKFEKLEG
Sbjct: 59  GNIIVVDNLPVVPKEKFEKLEG 80


>ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Glycine max]
          Length = 718

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 40/71 (56%), Positives = 45/71 (63%)
 Frame = +3

Query: 264 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPV 443
           ED SL +  +D S +DLD+IRLP G+D GI                 GFGNIIVVDNLPV
Sbjct: 11  EDTSLRLG-VDLSTLDLDAIRLPTGEDCGIVSDDEEVYQEENLEFESGFGNIIVVDNLPV 69

Query: 444 VPPEKFEKLEG 476
           VP EKFEKLEG
Sbjct: 70  VPREKFEKLEG 80


>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
           protein product [Vitis vinifera]
          Length = 718

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 39/62 (62%), Positives = 41/62 (66%)
 Frame = +3

Query: 291 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXXGFGNIIVVDNLPVVPPEKFEKL 470
           ID S +D DSIRLPPG+DFGI                 GFGNIIVVDNLPVVP EKFEKL
Sbjct: 19  IDVSNIDFDSIRLPPGEDFGITSDDDLHEEDPLEYDS-GFGNIIVVDNLPVVPREKFEKL 77

Query: 471 EG 476
           EG
Sbjct: 78  EG 79