BLASTX nr result

ID: Ephedra28_contig00003705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003705
         (1264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25757.1| unknown [Picea sitchensis]                              99   1e-23
gb|ABR16882.1| unknown [Picea sitchensis]                              72   6e-10
gb|ABK21516.1| unknown [Picea sitchensis]                              71   8e-10
gb|ABK21577.1| unknown [Picea sitchensis]                              69   5e-09
ref|XP_004140334.1| PREDICTED: uncharacterized protein LOC101221...    56   8e-08
ref|XP_001757598.1| predicted protein [Physcomitrella patens] gi...    62   7e-07
gb|ABK23444.1| unknown [Picea sitchensis]                              60   2e-06
ref|XP_001753035.1| predicted protein [Physcomitrella patens] gi...    59   4e-06

>gb|ABK25757.1| unknown [Picea sitchensis]
          Length = 147

 Score = 99.4 bits (246), Expect(2) = 1e-23
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQKSSCGTSYGSKPVVRVEGFSSKI 558
           SHPYF  SPP R+DNPLVRD QF+  GVP S  NLSQ +SCG SYG+KP+VRVEGF+SK 
Sbjct: 77  SHPYFYGSPPNRSDNPLVRDTQFIRKGVPSSPVNLSQNTSCGASYGAKPLVRVEGFASKN 136

Query: 557 QNTHRSFTALA 525
           Q+T  + +ALA
Sbjct: 137 QDTRCNLSALA 147



 Score = 38.9 bits (89), Expect(2) = 1e-23
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 885 KDHLICPKPHRMALEADS-----HKSDGINHRYVMAGNVEEPNFEL 763
           KD LICP P RM           HK    NH Y +AGN  EP++E+
Sbjct: 13  KDQLICPIPDRMMASGPCTTRAIHKLYARNHSYAVAGNEGEPSYEI 58


>gb|ABR16882.1| unknown [Picea sitchensis]
          Length = 167

 Score = 71.6 bits (174), Expect = 6e-10
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQKSSCGTSYGSKPVVRVEGFSSKI 558
           S PYFC SPP+R+ NPL+ D +F+   +     N+SQKSSCG S+G+   VRVEGF    
Sbjct: 97  SLPYFCGSPPSRSHNPLIHDVKFIKKELAPPPVNVSQKSSCGASFGANTSVRVEGFFGSS 156

Query: 557 QNTHRSFTALA 525
              H   +ALA
Sbjct: 157 SEKHCIVSALA 167


>gb|ABK21516.1| unknown [Picea sitchensis]
          Length = 177

 Score = 71.2 bits (173), Expect = 8e-10
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQKSSCGTSYGSKPVVRVEGFSSKI 558
           S PYFC SPP+R+ NPL+ D +F+   +     N+SQKSSCG S+G+   VRVEGF    
Sbjct: 107 SLPYFCGSPPSRSHNPLIHDVKFIKKELAPPPVNVSQKSSCGASFGANTSVRVEGFFCSS 166

Query: 557 QNTHRSFTALA 525
              H   +ALA
Sbjct: 167 SEKHCIVSALA 177


>gb|ABK21577.1| unknown [Picea sitchensis]
          Length = 152

 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQKSSC-GTSYGSKPVVRVEGFSSK 561
           S PYFC SPP+R DNPLV D QF+   VP S + +S+  SC   S GS P +R+EGF   
Sbjct: 81  SPPYFCGSPPSRVDNPLVHDVQFIHQRVPSSPSAISKPKSCVRQSLGSSPGIRIEGFDCL 140

Query: 560 IQNTHRSFTALA 525
            ++T  S  A+A
Sbjct: 141 DRDTRCSIPAMA 152


>ref|XP_004140334.1| PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus]
           gi|449502459|ref|XP_004161646.1| PREDICTED:
           uncharacterized protein LOC101226448 [Cucumis sativus]
          Length = 158

 Score = 56.2 bits (134), Expect(2) = 8e-08
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 16/87 (18%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQF-------MSIGVPMSSANLSQKSSCG-------TSYG 600
           S PYFC SPP+R  NPL++DA+F       + +  P +S  LS   S G        ++G
Sbjct: 72  SPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFG 131

Query: 599 SKPVVRVEGFSSKI--QNTHRSFTALA 525
             P VR+EGF  ++  +  +RS  ALA
Sbjct: 132 KNPAVRIEGFDCRLDRERRNRSIPALA 158



 Score = 28.5 bits (62), Expect(2) = 8e-08
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 885 KDHLICPKPHRMALEADSHKSDGINHRY 802
           ++ ++CPKP R+ L  D+   +   HR+
Sbjct: 16  RERIVCPKPRRLGLINDTCNDNPFRHRF 43


>ref|XP_001757598.1| predicted protein [Physcomitrella patens]
           gi|162691292|gb|EDQ77655.1| predicted protein
           [Physcomitrella patens]
          Length = 183

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 12/83 (14%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQK-SSCG-----------TSYGSK 594
           S P FC SPPARA NPL+ D++F+       ++NLSQ+ SSCG            SY +K
Sbjct: 105 SPPNFCGSPPARAGNPLIHDSKFLQ----QRNSNLSQQLSSCGPSPYGTSTHGTASYDAK 160

Query: 593 PVVRVEGFSSKIQNTHRSFTALA 525
           PVVR+EGF S   +     +ALA
Sbjct: 161 PVVRIEGFGSFSSDLSSQVSALA 183


>gb|ABK23444.1| unknown [Picea sitchensis]
          Length = 166

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQKSSCG-TSYGSKPVVRVEGFSSK 561
           S PYF  SPP+RADNPLV D  F+   V  S + LS+  S G +S+G    VRVEGF   
Sbjct: 95  SPPYFNGSPPSRADNPLVHDINFIHQIVQASPSTLSKPKSFGRSSFGPNAAVRVEGFDCS 154

Query: 560 IQNTHRSFTALA 525
            ++T  S  ALA
Sbjct: 155 GRDTRCSIPALA 166


>ref|XP_001753035.1| predicted protein [Physcomitrella patens]
           gi|162695734|gb|EDQ82076.1| predicted protein
           [Physcomitrella patens]
          Length = 472

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
 Frame = -3

Query: 737 SHPYFCASPPARADNPLVRDAQFMSIGVPMSSANLSQK-SSCGTS-----------YGSK 594
           S P FC SPPARA NPL+ D++F+      +S+NLSQ+ SSCG S           Y + 
Sbjct: 393 SPPSFCGSPPARAGNPLIHDSKFLQ---QRTSSNLSQQLSSCGPSSYVPSSHGTSAYSAS 449

Query: 593 PVVRVEGFSSKIQNTHRSFTALA 525
           P VR+EGF S   +     +ALA
Sbjct: 450 PAVRIEGFGSFGSDLSSQVSALA 472


Top