BLASTX nr result

ID: Ephedra28_contig00003596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003596
         (971 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76233.1| unknown [Picea sitchensis]                             190   2e-78
ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Sela...   141   1e-54
ref|XP_001785617.1| predicted protein [Physcomitrella patens] gi...   157   6e-54
ref|XP_001760235.1| predicted protein [Physcomitrella patens] gi...   107   2e-38
ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Sela...   102   2e-19
ref|XP_005777827.1| hypothetical protein EMIHUDRAFT_123554 [Emil...    58   6e-06

>gb|ADE76233.1| unknown [Picea sitchensis]
          Length = 440

 Score =  190 bits (482), Expect(2) = 2e-78
 Identities = 99/169 (58%), Positives = 112/169 (66%)
 Frame = +1

Query: 244 VNATWPPQRAAILDRVSGSRRLQNKDMVAQVISQELKINVRKSFSGVGSFCEQVREVAEE 423
           VNA+WPP++AAILDR+SGSR+LQN             I+V             VREVAEE
Sbjct: 296 VNASWPPRKAAILDRISGSRKLQN-------------IHV-------------VREVAEE 329

Query: 424 DLVIVPHGSQNVNLLFARKGAVVIEVFPYLYYTTALRNYTHATQLHLYPXXXXXXXXXXX 603
           DL++VPHGSQNVNLLFARKGAVVIE+FPYLYYTTAL+NYTHA QLH+Y            
Sbjct: 330 DLLVVPHGSQNVNLLFARKGAVVIEIFPYLYYTTALKNYTHAAQLHVYSLLGDIPNKSFV 389

Query: 604 XXXXXXXGWDFCYGKLRWCKNYSRNQFVHADIEELKKLLRHIRKDSVTW 750
                  GWDFC+ K RWCK YSR Q VHADIE LKKLL  I +DS  W
Sbjct: 390 LHPLSIVGWDFCFEKFRWCKYYSRKQVVHADIEGLKKLLYQINEDSSRW 438



 Score =  130 bits (327), Expect(2) = 2e-78
 Identities = 55/80 (68%), Positives = 67/80 (83%)
 Frame = +3

Query: 3   SLYWFSNPGEVSNWAKGLLETFNMHTKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPD 182
           +LYWFS P E+S W KGLLE F+M T VKY++ P+ KN ++CFEDA+VFSAGT L+YVPD
Sbjct: 217 TLYWFSRPDEISEWGKGLLEAFSMQTNVKYVEFPDKKNGTVCFEDAIVFSAGTSLHYVPD 276

Query: 183 TDTNDWLRQKVLQHCSIPIV 242
            DTNDWLRQ +LQ+CSIPIV
Sbjct: 277 YDTNDWLRQHILQYCSIPIV 296


>ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Selaginella moellendorffii]
           gi|300144332|gb|EFJ11017.1| hypothetical protein
           SELMODRAFT_447140 [Selaginella moellendorffii]
          Length = 470

 Score =  141 bits (356), Expect(2) = 1e-54
 Identities = 68/138 (49%), Positives = 90/138 (65%)
 Frame = +1

Query: 244 VNATWPPQRAAILDRVSGSRRLQNKDMVAQVISQELKINVRKSFSGVGSFCEQVREVAEE 423
           V+A   P+R  +LDR +G R L NKD + +++S+ +K++    F+G GSFCEQV +VA E
Sbjct: 235 VSAIRVPKRVLVLDR-NGPRHLANKDEIVRIVSRTMKVSAVNDFAGTGSFCEQVSKVAGE 293

Query: 424 DLVIVPHGSQNVNLLFARKGAVVIEVFPYLYYTTALRNYTHATQLHLYPXXXXXXXXXXX 603
           + +IVPHGSQNVNLLFA  GA +IEVFPYL+   ALRNYTHA Q+H+YP           
Sbjct: 294 EFLIVPHGSQNVNLLFAPPGARIIEVFPYLFQNDALRNYTHAAQVHVYPLLGTLPPRNFI 353

Query: 604 XXXXXXXGWDFCYGKLRW 657
                  GW+ CY  +RW
Sbjct: 354 MRFWSLLGWEMCYHWVRW 371



 Score = 99.8 bits (247), Expect(2) = 1e-54
 Identities = 43/88 (48%), Positives = 61/88 (69%)
 Frame = +3

Query: 6   LYWFSNPGEVSNWAKGLLETFNMHTKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDT 185
           LYWF++P +VS+WAKG L+   M  KV+Y+ LP+  ++S+CF+DA++FS  T + YVP  
Sbjct: 155 LYWFASPADVSDWAKGFLQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSH 214

Query: 186 DTNDWLRQKVLQHCSIPIVG*CNMASPK 269
             N WLR KVL +CS+PIV    +  PK
Sbjct: 215 HHNSWLRDKVLGYCSLPIVNVSAIRVPK 242


>ref|XP_001785617.1| predicted protein [Physcomitrella patens]
           gi|162662750|gb|EDQ49564.1| predicted protein
           [Physcomitrella patens]
          Length = 568

 Score =  157 bits (398), Expect(2) = 6e-54
 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +1

Query: 247 NATWPPQRAAILDRVSGSRRLQNKDMVAQVISQELKINVRKSFSGVGSFCEQVREVAEED 426
           N++WP  RA +LDR SGSR+L NK    +++ + L + V     G+GSFC+QVR VAE+D
Sbjct: 285 NSSWPISRAVVLDRASGSRKLDNKLAAGKLMEEVLGVPVEHRSGGIGSFCDQVRSVAEDD 344

Query: 427 LVIVPHGSQNVNLLFARKGAVVIEVFPYLYYTTALRNYTHATQLHLYPXXXXXXXXXXXX 606
             +VPHGSQNVN LFAR GAVVIEVFPYLYYT ALRN+T+A  + +Y             
Sbjct: 345 FFLVPHGSQNVNFLFARPGAVVIEVFPYLYYTDALRNFTYAAAIDVYTLLGVRHPESTLM 404

Query: 607 XXXXXXGWDFCYGKLRW-CKNYSRNQFVHADIEELKKLLRHIRK 735
                 GW  C+   R  CKNY+R+Q V  D+ +L+ LLR ++K
Sbjct: 405 PFFSMLGWAGCFNFPRHVCKNYARSQPVQIDLIQLEGLLRVVQK 448



 Score = 81.3 bits (199), Expect(2) = 6e-54
 Identities = 37/77 (48%), Positives = 53/77 (68%)
 Frame = +3

Query: 3   SLYWFSNPGEVSNWAKGLLETFNMHTKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPD 182
           SL WF++  +VS W  G LE F +  KV++ +LP  K+DS+CF+DAV+FS  T   YVP+
Sbjct: 205 SLQWFASKADVSVWGIGFLEAFGLQNKVRFHELPMHKDDSICFKDAVLFSPPTHSRYVPN 264

Query: 183 TDTNDWLRQKVLQHCSI 233
            +TN  LR +VL++C I
Sbjct: 265 KETNALLRTEVLRYCGI 281


>ref|XP_001760235.1| predicted protein [Physcomitrella patens]
           gi|162688615|gb|EDQ74991.1| predicted protein
           [Physcomitrella patens]
          Length = 603

 Score =  107 bits (267), Expect(2) = 2e-38
 Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
 Frame = +1

Query: 244 VNATWPPQRAAILDRVSGSRRLQNKDMVAQVISQELKINVRKSFSGVGSFCEQVREVAEE 423
           ++A+ P     I++R+  SR + N D V   + +EL +  +   SGVG FC+QV+ +A  
Sbjct: 315 LDASRPVNNVVIVERIHSSRSIANMDEVKYTLEKELMVVPKVVTSGVGDFCDQVKVIASA 374

Query: 424 DLVIVPHGSQNVNLLFARKGAVVIEVFPYLYYTTALRNYTHATQLHLYP-----XXXXXX 588
           D  + PHGS N+N LFAR+ + V+E FP LYY     NY HA  ++ +            
Sbjct: 375 DFAVTPHGSHNINFLFARRYSTVLEAFPLLYYIDWFGNYVHAANVNHHELYGTWLAKQGS 434

Query: 589 XXXXXXXXXXXXGWDFCYGKLRWCKNYSRNQFVHADIEELKKLLRHIRKDSVTWNTQTTL 768
                       GW  C+   R C NY+++Q V   I +L+KLL+H+         +T L
Sbjct: 435 LPFKMRVYANLYGWSGCFYH-RACMNYAKSQQVAIHIGQLEKLLKHLTSSCQVVVDETCL 493

Query: 769 KK 774
            K
Sbjct: 494 FK 495



 Score = 79.7 bits (195), Expect(2) = 2e-38
 Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   SLYWFSN--PGEVSNWAKGLLETFNMHTKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYV 176
           +LYWF++  P  +S W+ GL++ F    KV+++D+P      +CFEDA++FS  T   YV
Sbjct: 234 TLYWFAHRDPKTISRWSLGLIKVFLETMKVEFMDVPGPDEPQICFEDAILFSGLTNAGYV 293

Query: 177 PDTDTNDWLRQKVLQHCSIPIV 242
           P  + N WLR+KVL  C+IP++
Sbjct: 294 PGREANAWLREKVLGFCNIPVL 315


>ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Selaginella moellendorffii]
           gi|300140898|gb|EFJ07616.1| hypothetical protein
           SELMODRAFT_448362 [Selaginella moellendorffii]
          Length = 256

 Score =  102 bits (255), Expect = 2e-19
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = +3

Query: 6   LYWFSNPGEVSNWAKGLLETFNMHTKVKYIDLPETKNDSLCFEDAVVFSAGTKLYYVPDT 185
           LYWF++P +VS+WAKG L+   M  KV+Y+ LP+  ++S+CF+DA++FS  T + YVP  
Sbjct: 151 LYWFASPADVSDWAKGFLQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSY 210

Query: 186 DTNDWLRQKVLQHCSIPIVG--*CNMASPKGSNIGPRKWL*KTSKQ 317
             N WLR KVL +CS+PIVG    N  + K S IG  +W    SKQ
Sbjct: 211 HHNSWLRDKVLGYCSLPIVGERIGNPGTKKSSCIG-SQWAAAFSKQ 255


>ref|XP_005777827.1| hypothetical protein EMIHUDRAFT_123554 [Emiliania huxleyi CCMP1516]
           gi|485630129|gb|EOD25398.1| hypothetical protein
           EMIHUDRAFT_123554 [Emiliania huxleyi CCMP1516]
          Length = 347

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
 Frame = +1

Query: 292 SGSRRLQNKDMVAQVISQEL-KINVRKSFS-------GVGSFCEQVREVAEEDLVIVPHG 447
           +GSRR+ N D++A  + + L + N+ +S+S       G  SF EQ   V E+D++I PHG
Sbjct: 194 AGSRRVVNADLLAARLIRTLARHNLSRSYSLSHINDLGDFSFEEQAHWVHEKDVIIAPHG 253

Query: 448 SQNVNLLFARKGAVVIEVFPYLYYTTAL 531
           +QN N ++AR+   ++E++P  Y+   L
Sbjct: 254 AQNTNFVWARRCTSILEIYPANYFIPGL 281


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