BLASTX nr result
ID: Ephedra28_contig00003573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00003573
(1731 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG12154.1| triple gene block protein1 [Plantago asiatica mo... 400 e-109
gb|AGW45382.1| triple gene block protein 1 [Plantago asiatica mo... 400 e-108
dbj|BAG12124.1| triple gene block protein1 [Plantago asiatica mo... 398 e-108
dbj|BAG12149.1| triple gene block protein1 [Plantago asiatica mo... 395 e-107
gb|AAX19932.1| triple gene block protein 1 [Nandina mosaic virus] 394 e-107
dbj|BAG12139.1| triple gene block protein1 [Plantago asiatica mo... 391 e-106
ref|NP_620837.1| 25K triple gene block protein [Plantago asiatic... 389 e-105
gb|AAX19935.1| coat protein [Nandina mosaic virus] 386 e-104
gb|AAB26348.1| putative helicase [Plantago asiatica mosaic virus] 384 e-104
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi... 382 e-103
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus] 380 e-103
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]... 377 e-102
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus] 377 e-102
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus] 374 e-101
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA... 336 2e-89
gb|ACE62921.1| coat protein [Tulip virus X] 332 2e-88
gb|AAW30635.1| TGB1 [Tulip virus X] 316 2e-83
ref|NP_702989.1| hypothetical protein TVXgp2 [Tulip virus X] gi|... 305 5e-80
gb|AAW30636.1| coat protein [Tulip virus X] 271 6e-70
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7... 224 9e-56
>dbj|BAG12154.1| triple gene block protein1 [Plantago asiatica mosaic virus]
Length = 230
Score = 400 bits (1028), Expect = e-109
Identities = 197/221 (89%), Positives = 207/221 (93%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+N+FQRT+TPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQ PNLTGA+IRKL
Sbjct: 10 SNDFQRTNTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQSPNLTGAYIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPE NK NLLDEY ALQPLKGSWDVVLADPLQHSG ALRPHFVKSVSHRLCPETTKLIS
Sbjct: 70 TCPEPNKLNLLDEYSALQPLKGSWDVVLADPLQHSGLALRPHFVKSVSHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPCTSSRS+ STIQFSGLF+GPLLGTIIALD QALL+AH APFLCPTAALGLEFD
Sbjct: 130 KLICPCTSSRSDASTIQFSGLFEGPLLGTIIALDPTTQALLQAHGAPFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ LE+VQDKVGLYISLSRHR QLHVRSPPPHPTY
Sbjct: 190 TVTVVSALPLEDVQDKVGLYISLSRHRAQLHVRSPPPHPTY 230
>gb|AGW45382.1| triple gene block protein 1 [Plantago asiatica mosaic virus]
Length = 230
Score = 400 bits (1027), Expect = e-108
Identities = 193/221 (87%), Positives = 208/221 (94%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+NNFQRT+TPISKPLVVHAVAGAGKTTLIQNLLP+HPNLSAQTAGTPQ PNLTGA+IRKL
Sbjct: 10 SNNFQRTNTPISKPLVVHAVAGAGKTTLIQNLLPNHPNLSAQTAGTPQSPNLTGAYIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPE+NK NLLDEY ALQPLKGSWDVVLADPLQH G ALRPHFVKS+SHRLCPETTKLIS
Sbjct: 70 TCPEANKLNLLDEYAALQPLKGSWDVVLADPLQHPGLALRPHFVKSISHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPCTSSRS++S IQFSGLF+GPLLGTIIALDS Q LL+AH+APFLCPT ALGLEFD
Sbjct: 130 KLICPCTSSRSDSSIIQFSGLFEGPLLGTIIALDSTTQNLLQAHRAPFLCPTTALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS++ LEE+QDKVGLYISLSRHR QLHVRSPPPHPTY
Sbjct: 190 TVTVVSARPLEEIQDKVGLYISLSRHRTQLHVRSPPPHPTY 230
>dbj|BAG12124.1| triple gene block protein1 [Plantago asiatica mosaic virus]
gi|169219478|dbj|BAG12129.1| triple gene block protein2
[Plantago asiatica mosaic virus]
gi|169219484|dbj|BAG12134.1| triple gene block protein1
[Plantago asiatica mosaic virus]
gi|169219496|dbj|BAG12144.1| triple gene block protein1
[Plantago asiatica mosaic virus]
Length = 230
Score = 398 bits (1022), Expect = e-108
Identities = 194/221 (87%), Positives = 207/221 (93%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+N+FQRT+ PISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQ PNLTGA+IRKL
Sbjct: 10 SNDFQRTNIPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQSPNLTGAYIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDEY ALQPLKGSWDVVLADPLQHSG ALRPHFVKS+SHRLCPETTKLIS
Sbjct: 70 TCPESNKLNLLDEYAALQPLKGSWDVVLADPLQHSGLALRPHFVKSISHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPC+SSRS+ S+IQFSGLF+GPLLGTIIALDS QALL+AH APFLCPTAALGLEFD
Sbjct: 130 KLICPCSSSRSDTSSIQFSGLFEGPLLGTIIALDSTTQALLQAHGAPFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ L +VQDKVGLYISLSRHR QLHVRSPPPHPTY
Sbjct: 190 TVTVVSATPLADVQDKVGLYISLSRHRAQLHVRSPPPHPTY 230
>dbj|BAG12149.1| triple gene block protein1 [Plantago asiatica mosaic virus]
Length = 230
Score = 395 bits (1016), Expect = e-107
Identities = 193/221 (87%), Positives = 206/221 (93%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+N+FQRT+ PISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQ PNLTGA+IRKL
Sbjct: 10 SNDFQRTNIPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQSPNLTGAYIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDEY ALQPLKGSWDVVLADPLQHSG ALRPHFVKS+SHRLCPETTKLIS
Sbjct: 70 TCPESNKLNLLDEYAALQPLKGSWDVVLADPLQHSGLALRPHFVKSISHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPC+SSRS+ S+IQFSGLF+GPLLGTIIALDS QALL+ H APFLCPTAALGLEFD
Sbjct: 130 KLICPCSSSRSDTSSIQFSGLFEGPLLGTIIALDSTTQALLQDHGAPFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ L +VQDKVGLYISLSRHR QLHVRSPPPHPTY
Sbjct: 190 TVTVVSATPLADVQDKVGLYISLSRHRAQLHVRSPPPHPTY 230
>gb|AAX19932.1| triple gene block protein 1 [Nandina mosaic virus]
Length = 230
Score = 394 bits (1012), Expect = e-107
Identities = 192/221 (86%), Positives = 204/221 (92%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+N+FQRT+ PISKPLVVHAVAGAGKTTLIQNLL +HPN SAQTAGTPQ PNLTGAFIRKL
Sbjct: 10 SNDFQRTNIPISKPLVVHAVAGAGKTTLIQNLLSEHPNFSAQTAGTPQSPNLTGAFIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDEY ALQPLKGSWDVVLADPLQH+G LRPHF+KSVSHRLCPETTKLIS
Sbjct: 70 TCPESNKINLLDEYAALQPLKGSWDVVLADPLQHTGLTLRPHFIKSVSHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPCTSSR+E STIQFSGLFDGPLLGTIIALD QALL+AH APFLCP+AALGLEFD
Sbjct: 130 KLICPCTSSRAETSTIQFSGLFDGPLLGTIIALDQTTQALLQAHNAPFLCPSAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVSSQ LEEV D+VGLYISLSRHR QL+VRSPPPHPTY
Sbjct: 190 TVTVVSSQPLEEVSDQVGLYISLSRHRSQLYVRSPPPHPTY 230
>dbj|BAG12139.1| triple gene block protein1 [Plantago asiatica mosaic virus]
Length = 230
Score = 391 bits (1004), Expect = e-106
Identities = 191/221 (86%), Positives = 205/221 (92%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+N+FQRT+ PISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQ PNLTGA+IRKL
Sbjct: 10 SNDFQRTNIPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQSPNLTGAYIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDE ALQPLKGSWDVVLADPLQHSG ALRPHFVKS+SHRLCPETTKLIS
Sbjct: 70 TCPESNKLNLLDECAALQPLKGSWDVVLADPLQHSGLALRPHFVKSISHRLCPETTKLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KL+CPC+SSRS+ S+IQFSGLF+GPLLGTIIALD QALL+AH APFLCPTAALGLEFD
Sbjct: 130 KLICPCSSSRSDTSSIQFSGLFEGPLLGTIIALDLTTQALLQAHGAPFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ L +VQD+VGLYISLSRHR QLHVRSPPPHPTY
Sbjct: 190 TVTVVSATPLADVQDRVGLYISLSRHRAQLHVRSPPPHPTY 230
>ref|NP_620837.1| 25K triple gene block protein [Plantago asiatica mosaic virus]
gi|1174959|sp|Q07517.1|TGB1_P1AMV RecName: Full=Movement
and silencing protein TGBp1; AltName: Full=25 kDa
protein; AltName: Full=Silencing suppressor P25; AltName:
Full=Triple gene block 1 protein; Short=TGBp1
gi|311646|emb|CAA79762.1| 25K-protein [Plantago asiatica
mosaic virus]
Length = 230
Score = 389 bits (998), Expect = e-105
Identities = 190/221 (85%), Positives = 203/221 (91%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+NNFQRT+TPISKPLVVHAVAGAGKTTLIQNLLP+HPNL+AQTAG+PQ PNLTGAFIRKL
Sbjct: 10 SNNFQRTNTPISKPLVVHAVAGAGKTTLIQNLLPEHPNLAAQTAGSPQTPNLTGAFIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDEY ALQPLKGSWDVVLADPLQH G ALRPHF+KSVSHRLCP TT+LIS
Sbjct: 70 TCPESNKINLLDEYAALQPLKGSWDVVLADPLQHPGLALRPHFIKSVSHRLCPATTRLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KLVCPCTSSR+E STIQFSGLF+GPLLGT+IALD QALL AH A FLCPTAALGLEFD
Sbjct: 130 KLVCPCTSSRTEESTIQFSGLFEGPLLGTVIALDQTTQALLTAHGAHFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ LEEV DKVGLYISLSRHR QLHVRSPPPHP++
Sbjct: 190 TVTVVSALPLEEVADKVGLYISLSRHRSQLHVRSPPPHPSH 230
>gb|AAX19935.1| coat protein [Nandina mosaic virus]
Length = 207
Score = 386 bits (992), Expect = e-104
Identities = 192/207 (92%), Positives = 200/207 (96%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MAL APT DALAAMTFQVSSPSVPTA EL TI++GLTT+G+P DGLLSHALAVVNACFD
Sbjct: 1 MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTTIGVPTDGLLSHALAVVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSS FVTLSGPSPTATISLAQ+AGVIKVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61 AGSSTFVTLSGPSPTATISLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRGQLS+TAPQVQFLPAPSD
Sbjct: 181 ASTSTQFTRGQLSSTAPQVQFLPAPSD 207
>gb|AAB26348.1| putative helicase [Plantago asiatica mosaic virus]
Length = 230
Score = 384 bits (987), Expect = e-104
Identities = 189/221 (85%), Positives = 202/221 (91%)
Frame = -3
Query: 1729 ANNFQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKL 1550
+NNFQRT+TPISKPLVV AVAGAGKTTLIQNLLP+HPNL+AQTAG+PQ PNLTGAFIRKL
Sbjct: 10 SNNFQRTNTPISKPLVVLAVAGAGKTTLIQNLLPEHPNLAAQTAGSPQTPNLTGAFIRKL 69
Query: 1549 TCPESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLIS 1370
TCPESNK NLLDEY ALQPLKGSWDVVLADPLQH G ALRPHF+KSVSHRLCP TT+LIS
Sbjct: 70 TCPESNKINLLDEYAALQPLKGSWDVVLADPLQHPGLALRPHFIKSVSHRLCPATTRLIS 129
Query: 1369 KLVCPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFD 1190
KLVCPCTSSR+E STIQFSGLF+GPLLGT+IALD QALL AH A FLCPTAALGLEFD
Sbjct: 130 KLVCPCTSSRTEESTIQFSGLFEGPLLGTVIALDQTTQALLTAHGAHFLCPTAALGLEFD 189
Query: 1189 VVTVVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VTVVS+ LEEV DKVGLYISLSRHR QLHVRSPPPHP++
Sbjct: 190 TVTVVSALPLEEVADKVGLYISLSRHRSQLHVRSPPPHPSH 230
>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
gi|169219481|dbj|BAG12132.1| coat protein [Plantago
asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
protein [Plantago asiatica mosaic virus]
gi|169219499|dbj|BAG12147.1| coat protein [Plantago
asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 382 bits (980), Expect = e-103
Identities = 188/207 (90%), Positives = 202/207 (97%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRG LSNTAPQVQFLP+PSD
Sbjct: 181 ASTSTQFTRGHLSNTAPQVQFLPSPSD 207
>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 380 bits (977), Expect = e-103
Identities = 187/207 (90%), Positives = 202/207 (97%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRGQLSNTAPQVQFLP+PSD
Sbjct: 181 ASTSTQFTRGQLSNTAPQVQFLPSPSD 207
>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
protein; AltName: Full=Capsid protein; Short=CP
gi|311649|emb|CAA79765.1| capsid protein [Plantago
asiatica mosaic virus]
Length = 207
Score = 377 bits (969), Expect = e-102
Identities = 187/207 (90%), Positives = 198/207 (95%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN APTADALAAM F VSSPSVPTA+EL+TI+ GLTTLG+P D LLSHALA+VNACFD
Sbjct: 1 MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSS+FVTLSGPSPT TISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61 AGSSSFVTLSGPSPTPTISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFDFFDGLLNPAALEP GGLSRTPTPDEVTANETARSLNLFEARA+ SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRGQLSNTAPQVQFLPAPSD
Sbjct: 181 ASTSTQFTRGQLSNTAPQVQFLPAPSD 207
>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 377 bits (968), Expect = e-102
Identities = 186/207 (89%), Positives = 200/207 (96%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFD FDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRG LSNTAPQ QFLP+PSD
Sbjct: 181 ASTSTQFTRGHLSNTAPQAQFLPSPSD 207
>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 374 bits (960), Expect = e-101
Identities = 183/207 (88%), Positives = 201/207 (97%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTTLG+PA+ LLSHAL+VVNACFD
Sbjct: 1 MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTTLGVPAEALLSHALSVVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
ANIKFEHRWAGFDFFDGLLNPAALEPLGGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
ASTSTQFTRGQLS+TAPQ+QFLP+PSD
Sbjct: 181 ASTSTQFTRGQLSSTAPQIQFLPSPSD 207
>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
protein [Tulip virus X]
Length = 207
Score = 336 bits (861), Expect = 2e-89
Identities = 162/207 (78%), Positives = 187/207 (90%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN AP +ALAAMT +VSSP+VPT EL+TI+ GLTTLG+PAD L+SHALA+VNACFD
Sbjct: 1 MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSS F T+SGPSPT TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61 AGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
A +K +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS+NL
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
A+TSTQFTRGQLSNT+P VQFLP+P D
Sbjct: 181 ATTSTQFTRGQLSNTSPTVQFLPSPED 207
>gb|ACE62921.1| coat protein [Tulip virus X]
Length = 207
Score = 332 bits (852), Expect = 2e-88
Identities = 161/207 (77%), Positives = 186/207 (89%)
Frame = -3
Query: 625 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 446
MALN APT +ALAAMT VSSP+VPT ELETI+ GLTTLG+P D L+SHALA+VNACFD
Sbjct: 1 MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTTLGVPTDSLISHALALVNACFD 60
Query: 445 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 266
AGSS F TLSGPSPT+TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61 AGSSQFTTLSGPSPTSTITLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFAR 120
Query: 265 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 86
A +K +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS++L
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSL 180
Query: 85 ASTSTQFTRGQLSNTAPQVQFLPAPSD 5
A+T+TQFTRGQLSNT+P VQ+LP P D
Sbjct: 181 ATTATQFTRGQLSNTSPTVQYLPNPED 207
>gb|AAW30635.1| TGB1 [Tulip virus X]
Length = 229
Score = 316 bits (809), Expect = 2e-83
Identities = 157/217 (72%), Positives = 172/217 (79%)
Frame = -3
Query: 1720 FQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKLTCP 1541
F RT P+SKPLV+HAVAGAGKTTLIQNLL +HPNLSAQTAG PQ P L GA+IRKLT P
Sbjct: 13 FTRTKLPLSKPLVIHAVAGAGKTTLIQNLLAEHPNLSAQTAGVPQNPTLDGAYIRKLTVP 72
Query: 1540 ESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLISKLV 1361
ESNK N+LDEY ALQPLKGSWDVV ADPLQH ALRPHF+K+ SHRLCP TTKLISKLV
Sbjct: 73 ESNKLNILDEYAALQPLKGSWDVVCADPLQHPNTALRPHFLKTTSHRLCPATTKLISKLV 132
Query: 1360 CPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFDVVT 1181
CPC SSR E + I +GLF+ PL GTII+LDS ALLRAH CP + LGLEF +VT
Sbjct: 133 CPCDSSRPEPTKITITGLFENPLFGTIISLDSACDALLRAHGLKTHCPESVLGLEFPIVT 192
Query: 1180 VVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPT 1070
VVSS L EV +K LYISLSRH +LHVR PPPHPT
Sbjct: 193 VVSSVPLHEVAEKHRLYISLSRHTQELHVRCPPPHPT 229
>ref|NP_702989.1| hypothetical protein TVXgp2 [Tulip virus X]
gi|23491555|dbj|BAC16786.1| tgb1 [Tulip virus X]
Length = 230
Score = 305 bits (780), Expect = 5e-80
Identities = 150/218 (68%), Positives = 170/218 (77%)
Frame = -3
Query: 1720 FQRTSTPISKPLVVHAVAGAGKTTLIQNLLPDHPNLSAQTAGTPQPPNLTGAFIRKLTCP 1541
F RT P+SKPLV+HAVAGAGKTTLIQ+LL +HPNLSAQTAG PQ P L GA+IRKLT P
Sbjct: 13 FTRTKLPLSKPLVIHAVAGAGKTTLIQSLLAEHPNLSAQTAGVPQNPTLDGAYIRKLTIP 72
Query: 1540 ESNKTNLLDEYVALQPLKGSWDVVLADPLQHSGPALRPHFVKSVSHRLCPETTKLISKLV 1361
ESNK N+LDEY AL PLKGSWDVV ADPLQH ALRPHF+K+ SHRLCP TT LISKL+
Sbjct: 73 ESNKLNILDEYAALHPLKGSWDVVCADPLQHPNTALRPHFLKTTSHRLCPATTGLISKLI 132
Query: 1360 CPCTSSRSENSTIQFSGLFDGPLLGTIIALDSNIQALLRAHKAPFLCPTAALGLEFDVVT 1181
CPC+SSR E + I +GLF+ PL GTII+LD LL+AH CP + LGLEF VVT
Sbjct: 133 CPCSSSRPEPTKITVTGLFESPLFGTIISLDDTCHKLLQAHGLQPHCPESVLGLEFPVVT 192
Query: 1180 VVSSQSLEEVQDKVGLYISLSRHRHQLHVRSPPPHPTY 1067
VVSS L E+ +K LYISLSRH +LHVR PPPHPT+
Sbjct: 193 VVSSLPLHEIVEKHRLYISLSRHTQELHVRCPPPHPTH 230
>gb|AAW30636.1| coat protein [Tulip virus X]
Length = 157
Score = 271 bits (693), Expect = 6e-70
Identities = 128/157 (81%), Positives = 146/157 (92%)
Frame = -3
Query: 475 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLA 296
ALA+VNACFDAGSS F TLSGPSPT ++LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+
Sbjct: 1 ALALVNACFDAGSSQFTTLSGPSPTPAVTLAQIAGVVKVSTTLRKFCRFYAKLIWNARLS 60
Query: 295 RNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNL 116
RNLPPAGFARA +K H+WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL L
Sbjct: 61 RNLPPAGFARAYVKTGHKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGL 120
Query: 115 FEARANSSNLASTSTQFTRGQLSNTAPQVQFLPAPSD 5
FE+RANS+NLA+TSTQFTRGQLSNT+P VQFLP+P D
Sbjct: 121 FESRANSNNLATTSTQFTRGQLSNTSPTVQFLPSPED 157
>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
coat protein [Cassava common mosaic virus]
gi|1587827|prf||2207297E ORF 5
Length = 229
Score = 224 bits (571), Expect = 9e-56
Identities = 111/201 (55%), Positives = 148/201 (73%)
Frame = -3
Query: 622 ALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDA 443
AL+ APT + L+ + + +S V +A+ L I+ +L +P L+ HAL +VN CFD+
Sbjct: 24 ALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFCFDS 83
Query: 442 GSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARA 263
GSS + T+ G SPT TI A +AG ++ TTLR+FCRYYAK+IWNAR+ N+PPAG+A A
Sbjct: 84 GSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANA 143
Query: 262 NIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLA 83
+IK E +AGFDFFDG++N AALEP GGL R PTP E+ A ETARSLNLFEA++ +NLA
Sbjct: 144 HIKPEQAFAGFDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLA 203
Query: 82 STSTQFTRGQLSNTAPQVQFL 20
+ +TQ TRG+LS++ PQVQFL
Sbjct: 204 TNATQVTRGRLSSSEPQVQFL 224