BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003560
         (3039 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY11148.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]    835   0.0  
gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]          827   0.0  
gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus pe...   824   0.0  
ref|XP_004981452.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...   823   0.0  
ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Bra...   822   0.0  
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra...   821   0.0  
gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis]              821   0.0  
ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [S...   819   0.0  
ref|XP_004981451.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...   815   0.0  
gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]        815   0.0  
gb|EMS54431.1| 5'-3' exoribonuclease 4 [Triticum urartu]              814   0.0  
ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] g...   814   0.0  
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A...   813   0.0  
dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]    813   0.0  
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   812   0.0  
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu...   811   0.0  
ref|XP_002328516.1| predicted protein [Populus trichocarpa]           808   0.0  
gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indi...   807   0.0  
gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japo...   807   0.0  
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   805   0.0  

>gb|EOY11148.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]
          Length = 869

 Score =  835 bits (2157), Expect = 0.0
 Identities = 433/715 (60%), Positives = 509/715 (71%), Gaps = 13/715 (1%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            ++ KEK E  DSNVITPGT FMA LS+ALQYY+  RLN++ GW+N KVILSD+N PGEGE
Sbjct: 36   LLPKEKPETCDSNVITPGTPFMAVLSVALQYYLQSRLNHNPGWRNTKVILSDANAPGEGE 95

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG +PNT+HCLYGLDADLIML+LATHE+HFSILREV+T PGQ+EKCF
Sbjct: 96   HKIMSYIRLQRNLPGFNPNTQHCLYGLDADLIMLSLATHEVHFSILREVITLPGQQEKCF 155

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G PD   G  D  A      HKK YQFLNIW LREYL++DL+IPN  
Sbjct: 156  LCGQVGHLAAECHGKPDN--GTEDRNAVDDTPIHKKKYQFLNIWVLREYLQYDLEIPNPP 213

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            FEI+FERIVDDFVF+CFFVGNDFLPHMPTLEIREGAINLLM  YK EF+ MGGYLTDAGE
Sbjct: 214  FEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMQVYKREFSAMGGYLTDAGE 273

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVE FIQ+VAV+ED+IF+KR RIQQA EN +  ++K R  +   SE A +      
Sbjct: 274  VLLDRVECFIQSVAVHEDQIFQKRTRIQQAFENNEQMKLKARGES---SEEAQA------ 324

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEG 1081
                            P  DKIKLGE G+KERYYAEKF       +E+V++DVVLKY EG
Sbjct: 325  ----------------PVVDKIKLGEPGYKERYYAEKFNVSNPVEIEEVKRDVVLKYVEG 368

Query: 1082 LVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSAS 1261
            L WV RYYYQGVCSW WFYPYHYAPFASDLKDL +LEI FF+G+PFKPFDQLMGTLP+AS
Sbjct: 369  LCWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLSDLEITFFIGEPFKPFDQLMGTLPAAS 428

Query: 1262 AQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIE 1441
            + ALP  Y  LMT+  SPI  FYP+D EIDM+GKRFAWQGVVKLPFIDE +LLA T K+E
Sbjct: 429  SGALPDRYGKLMTDPSSPIYKFYPSDFEIDMHGKRFAWQGVVKLPFIDEKKLLAATRKLE 488

Query: 1442 DSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMN 1621
            D+LT EE++RNS+  DLL++   HPLA  +   Y+ +             ID   SGGMN
Sbjct: 489  DTLTVEEQFRNSVMLDLLYVHRLHPLASLVFSYYQIYCQLRPH-ERFVWPIDTNTSGGMN 547

Query: 1622 GFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQ 1801
            GFL   +        PSPVKG+  I+SNQ L V Y+NP   +HI + P GV+IP+K +T 
Sbjct: 548  GFLWLSERNGWQGVVPSPVKGLPYIESNQVLNVTYLNPSCHKHIPELPEGVMIPKKVLTP 607

Query: 1802 HDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRES 1981
             DIK  P+LWHEDNG R    ++RP VPGAI GP+L EAAHRLV NTL IKS  S S   
Sbjct: 608  LDIKPLPVLWHEDNGGRRQQGRDRPRVPGAIVGPQLGEAAHRLVKNTLNIKSNGSSS--G 665

Query: 1982 CTQQSRVQSHNNAFLLAMPSHSQKS-------------YTPRRRPAGPPGYEQGF 2107
              +Q  + + +N +    P  +  S             Y+ R RPAGPPGYE+G+
Sbjct: 666  WGEQPPIFNISNNYSSIRPRPAGPSGYERGFFDDPNHYYSSRPRPAGPPGYERGY 720


>gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]
          Length = 990

 Score =  827 bits (2136), Expect = 0.0
 Identities = 433/725 (59%), Positives = 509/725 (70%), Gaps = 23/725 (3%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            ++ KEK E  DSNVITPGT FMA LS+ALQYY+  RLN++ GW+N KVILSD+N PGEGE
Sbjct: 147  LLPKEKPETCDSNVITPGTPFMAVLSVALQYYLQSRLNHNPGWRNTKVILSDANAPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG +PNT+HCLYGLDADLIML+LATHE+HFSILREV+T PGQ+EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFNPNTQHCLYGLDADLIMLSLATHEVHFSILREVITLPGQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G PD   G  D  A      HKK YQFLNIW LREYL++DL+IPN  
Sbjct: 267  LCGQVGHLAAECHGKPDN--GTEDRNAVDDTPIHKKKYQFLNIWVLREYLQYDLEIPNPP 324

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            FEI+FERIVDDFVF+CFFVGNDFLPHMPTLEIREGAINLLM  YK EF+ MGGYLTDAGE
Sbjct: 325  FEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMQVYKREFSAMGGYLTDAGE 384

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVE FIQ+VAV+ED+IF+KR RIQQA EN +  ++K R  +   SE A +      
Sbjct: 385  VLLDRVECFIQSVAVHEDQIFQKRTRIQQAFENNEQMKLKARGES---SEEAQA------ 435

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDV------- 1060
                            P  DKIKLGE G+KERYYAEKF       +E+V++DV       
Sbjct: 436  ----------------PVVDKIKLGEPGYKERYYAEKFNVSNPVEIEEVKRDVISNSCLF 479

Query: 1061 ---VLKYTEGLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFD 1231
               VLKY EGL WV RYYYQGVCSW WFYPYHYAPFASDLKDL +LEI FF+G+PFKPFD
Sbjct: 480  SLQVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLSDLEITFFIGEPFKPFD 539

Query: 1232 QLMGTLPSASAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEG 1411
            QLMGTLP+AS+ ALP  Y  LMT+  SPI  FYP+D EIDM+GKRFAWQGVVKLPFIDE 
Sbjct: 540  QLMGTLPAASSGALPDRYGKLMTDPSSPIYKFYPSDFEIDMHGKRFAWQGVVKLPFIDEK 599

Query: 1412 RLLAETAKIEDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEE 1591
            +LLA T K+ED+LT EE++RNS+  DLL++   HPLA  +   Y+ +             
Sbjct: 600  KLLAATRKLEDTLTVEEQFRNSVMLDLLYVHRLHPLASLVFSYYQIYCQLRPH-ERFVWP 658

Query: 1592 IDPEYSGGMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNG 1771
            ID   SGGMNGFL   +        PSPVKG+  I+SNQ L V Y+NP   +HI + P G
Sbjct: 659  IDTNTSGGMNGFLWLSERNGWQGVVPSPVKGLPYIESNQVLNVTYLNPSCHKHIPELPEG 718

Query: 1772 VVIPRKTITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQI 1951
            V+IP+K +T  DIK  P+LWHEDNG R    ++RP VPGAI GP+L EAAHRLV NTL I
Sbjct: 719  VMIPKKVLTPLDIKPLPVLWHEDNGGRRQQGRDRPRVPGAIVGPQLGEAAHRLVKNTLNI 778

Query: 1952 KSGASKSRESCTQQSRVQSHNNAFLLAMPSHSQKS-------------YTPRRRPAGPPG 2092
            KS  S S     +Q  + + +N +    P  +  S             Y+ R RPAGPPG
Sbjct: 779  KSNGSSS--GWGEQPPIFNISNNYSSIRPRPAGPSGYERGFFDDPNHYYSSRPRPAGPPG 836

Query: 2093 YEQGF 2107
            YE+G+
Sbjct: 837  YERGY 841


>gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
          Length = 972

 Score =  824 bits (2128), Expect = 0.0
 Identities = 430/706 (60%), Positives = 506/706 (71%), Gaps = 4/706 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            ++ KEK E  DSNVITPGT+FMA LS+ALQY+I  RLN++ GW++ KVILSDSNV GEGE
Sbjct: 147  LIPKEKPETSDSNVITPGTQFMAVLSVALQYFIQSRLNHNPGWRSTKVILSDSNVSGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNL G DPNTRHCLYGLDADLIMLALATHE+HFSILREV+T PGQ+EKCF
Sbjct: 207  HKIMSYIRLQRNLLGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVITLPGQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G  D      D+        HKK YQFLNIW LREYL+++L+IPN  
Sbjct: 267  LCGQVGHLAAECRGKLDDYGNVVDE-----TPIHKKKYQFLNIWVLREYLQYELEIPNPP 321

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF  MGGYLTDAGE
Sbjct: 322  FQINFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMHIYRREFTAMGGYLTDAGE 381

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVEHFIQ+VAV+E +IF+KR RIQQA EN   + M+ RS     +E  A       
Sbjct: 382  VLLDRVEHFIQSVAVFERQIFQKRVRIQQAIEN--NEEMRNRSRRESSAELPA------- 432

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEG 1081
                            P  DK+KLGE G+ ERYYAEKF     E +++V+KD+VLKY EG
Sbjct: 433  ----------------PVVDKVKLGEPGYTERYYAEKFQVTKPEEIDNVKKDLVLKYVEG 476

Query: 1082 LVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSAS 1261
            L WV RYYYQGVCSW W+YPYHYAPFASDLKDL+ELEI FFLG+PFKPFDQLMGTLP+AS
Sbjct: 477  LCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLDELEITFFLGEPFKPFDQLMGTLPAAS 536

Query: 1262 AQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIE 1441
            + ALP+ YR+LMT+  SPI +FYP+D EIDMNGKRFAWQGV KLPFIDE +LLA+T ++E
Sbjct: 537  SSALPEKYRNLMTDPSSPIYNFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAQTRRLE 596

Query: 1442 DSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMN 1621
             +LTEEE+ RNS+  DLL++  +HPLA  +   Y+ +  +  +       ID   SGGMN
Sbjct: 597  STLTEEEQARNSVMLDLLYVYPSHPLAAEMKLYYQLYYQSAPQ-ERFVWPIDTIASGGMN 655

Query: 1622 GF--LSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTI 1795
            G+  LS   G  C +  PSPV+G  +ID NQ L V Y+NP + +HI +PP GVV+P+K +
Sbjct: 656  GYLWLSERNGVRCVI--PSPVRGYPNIDYNQVLNVTYLNPAAHKHIPEPPQGVVMPKKVV 713

Query: 1796 TQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSR 1975
               DIK AP LWHEDNGRR    +ERP VPGAI+GP L EAAHRLV NTL I+S  S S 
Sbjct: 714  KPMDIKPAPALWHEDNGRRQQ-GRERPQVPGAIAGPMLGEAAHRLVKNTLNIRSNNSAS- 771

Query: 1976 ESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGF 2107
                           F    P  +     P  R RPAGP GYE+GF
Sbjct: 772  --------------GFWDQQPLRNFPGNYPVNRPRPAGPSGYEKGF 803


>ref|XP_004981452.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Setaria italica]
          Length = 989

 Score =  823 bits (2125), Expect = 0.0
 Identities = 459/876 (52%), Positives = 552/876 (63%), Gaps = 24/876 (2%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +  KEKSEA DSNVITPGT+FM  LS ALQYYI  RLN+  GW+++KVILSDSNVPGEGE
Sbjct: 147  LAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQLRLNHTLGWQSVKVILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIMLALATHE+HFSILREV++ PGQ+EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVISMPGQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D A +L   HKK YQFL+IW LREYL  DL+I +A 
Sbjct: 267  LCGQVGHLAAECRGPSQV------DSAVELPPIHKKKYQFLHIWVLREYLAKDLEIVDAP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER++DDFVFMCFFVGNDFLPHMPTLEIREGAINLLM+ Y+AEF +MGGYLTD GE
Sbjct: 321  FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMSIYRAEFISMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVEHFIQ+VA  E++IF+KRARIQQA+EN + +    R S                
Sbjct: 381  VVLDRVEHFIQSVAFNEEQIFQKRARIQQARENNEERNKIQRES---------------- 424

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
                        TE N + DK+KLGE G++ERYYAEKF  + + + ++ VR+DVV KY E
Sbjct: 425  ------------TEENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQVRRDVVQKYVE 472

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLKDL ELEI FFLG+PFKPFDQLMGTLP+A
Sbjct: 473  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKDLAELEITFFLGQPFKPFDQLMGTLPAA 532

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LMT+ +SP+  FYP D EIDMNGKRFAWQGV KLPFIDE RLLAET K+
Sbjct: 533  SSNALPKYYGDLMTDPNSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDETRLLAETRKL 592

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLA---PFILRLYEHHSSTCVEGVSNTEEIDPEYS 1609
            ED+LTEEEK+RN+  FD++++  THPL     F+ R+Y H   T    +     IDP  S
Sbjct: 593  EDTLTEEEKFRNTTMFDIIYVRETHPLTAQIAFLYRMYNHLPRTDPYVI----PIDPAAS 648

Query: 1610 GGMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRK 1789
            GGMNGFL   +     +   SPVK    I  N+ L   Y+NP   +HI +PP GV++P K
Sbjct: 649  GGMNGFLCLSERNWYSITVTSPVKCFNGIAQNRVLNATYLNPQYHKHIPEPPVGVIVPGK 708

Query: 1790 TITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASK 1969
             +   D K  P+LWHEDN RR    +ERP V GA+SG  L +AAHRLV N+LQIKSG++ 
Sbjct: 709  ILKPSDFKPFPVLWHEDNSRRQ--ARERPQVSGALSGSLLGQAAHRLVKNSLQIKSGSA- 765

Query: 1970 SRESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTETXXXXXXX 2143
                            A LL MP +    Y P  R RPAGP GYE+GF+           
Sbjct: 766  ----------------AGLLEMP-YRGAPYGPGNRPRPAGPLGYERGFVDNPHHAHTSRS 808

Query: 2144 XXXXXXXXXXXXXXXXXXMPGTAYSNDK-----RQARSGSASYPVYVQGNDLVPSIGP-- 2302
                                G A +N +      +  SGS    ++   + L    GP  
Sbjct: 809  VPNSHPQFF-----------GDAQANRQPMRILERPNSGSHEAGIHASMSKLTIHEGPRL 857

Query: 2303 -------VNGYYPSSQTVHAGIPNGYSGIPTTNP-QGLPVXXXXXXXXXXXXVQYHKDHL 2458
                    +GY+P+        PN Y+G P   P Q +                + +   
Sbjct: 858  HQNNRMQNSGYWPNQPH-----PNHYAGPPPQQPMQNISFTPQRPFQTGG----FPQQRP 908

Query: 2459 VQTIQPPMPPPTWF---PVRGNNSAPPLYSTPSQPN 2557
            V  + PP+PP  W    P  G    P  +   + P+
Sbjct: 909  VNGVPPPLPPSNWIGKQPTGGPPGVPAKHDPRTAPD 944


>ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
          Length = 992

 Score =  822 bits (2122), Expect = 0.0
 Identities = 455/871 (52%), Positives = 545/871 (62%), Gaps = 16/871 (1%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +V K+KSEA DSNVITPGT+FM  LS ALQYYI  RLN+  GW+++KV+LSDSNVPGEGE
Sbjct: 147  LVQKQKSEAIDSNVITPGTQFMFVLSSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIML+LATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D   +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECRGPAQA------DNVVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FERIVDDFVF+CFFVGNDFLPHMPTLEIREGA+NLLMA Y++EF  MGGYLTD GE
Sbjct: 321  FKINFERIVDDFVFICFFVGNDFLPHMPTLEIREGALNLLMAIYRSEFKPMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L+RVEHFIQ+VAV+E++IF KRARIQQA EN + +R                      
Sbjct: 381  VLLERVEHFIQSVAVHEEQIFRKRARIQQAYENNEERR---------------------- 418

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
                 K +  N  + NP+ D +KLGE G++ERYYAEKF  + + + ++ V++DVV KY E
Sbjct: 419  -----KGQRENSEDVNPYVDMVKLGEPGYRERYYAEKFREEAESKPIDQVQRDVVQKYVE 473

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLK L E EI FFLG+PFKPFDQLMGTLP+A
Sbjct: 474  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLTEFEITFFLGQPFKPFDQLMGTLPAA 533

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LMT+ +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET K+
Sbjct: 534  SSNALPKYYGDLMTDPNSPLKYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKV 593

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGM 1618
            EDSLTEEE++RN   FD++++  THPLA  I  LY+  +       S    IDP  SGGM
Sbjct: 594  EDSLTEEERFRNRTMFDIIYVRETHPLAAQIAFLYQMCTQPSTTDPSYLIPIDPAASGGM 653

Query: 1619 NGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTIT 1798
            NGFL   +     +   SPVKG   I  N+ L   Y+NP   +HI +PP GV+IP K + 
Sbjct: 654  NGFLCLSQRNWYSISVGSPVKGFNGITHNRVLNSTYLNPQYHKHIPEPPEGVIIPPKILK 713

Query: 1799 QHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRE 1978
             +D K  P+LWHEDN RR    ++RP V GA+SG  L EAAHRLV N+LQIKSG+S    
Sbjct: 714  PYDFKPFPVLWHEDNSRRQ--TRDRPQVHGALSGSVLGEAAHRLVKNSLQIKSGSS---- 767

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTETXXXXXXXXXX 2152
                         A LL MP +    Y P  R RPAGP GYE+GF+              
Sbjct: 768  -------------AGLLDMP-YRGAPYGPGNRPRPAGPLGYERGFVDNPYLAHMSRSAPN 813

Query: 2153 XXXXXXXXXXXXXXXMPGTAYSNDKRQ---ARSGSASYPVYVQGNDLVPSIGPVNGYYPS 2323
                           +      N +       SG +   +         +    +GY+P+
Sbjct: 814  PRPQFFGEAQTNRPNVRILERPNTRSHDGGINSGMSKLAIQDGPRMHQNNRTQNSGYFPN 873

Query: 2324 SQTVHAGIPNGYSGIP------TTN--PQGLPVXXXXXXXXXXXXVQYHKDHLVQTIQPP 2479
                    PN Y+G P       TN  PQ                  +     V  + PP
Sbjct: 874  QPH-----PNNYAGFPPQRPMQNTNFTPQRPVQNAGLSQQRPVQNAGFLHQQPVNGVPPP 928

Query: 2480 MPPPTWF--PVRGNNSAPPLYSTPSQPNVRQ 2566
            +PP TW    + G  +  P+   P     RQ
Sbjct: 929  LPPSTWIGKQMSGGQTGKPVKQDPRATTHRQ 959


>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp. vesca]
          Length = 971

 Score =  821 bits (2121), Expect = 0.0
 Identities = 425/703 (60%), Positives = 506/703 (71%), Gaps = 1/703 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +V KEK E  DSNVITPGT+FMA LS+ALQY+I  +LN+DRGW++ KVILSD+NVPGEGE
Sbjct: 147  LVPKEKRETSDSNVITPGTQFMAVLSVALQYFIQSKLNSDRGWRSTKVILSDANVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIRSQRNLPG DPNTRHCLYGLDADLIMLALATHE+HFSILREV+T P Q+EKCF
Sbjct: 207  HKIMSYIRSQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVITLPSQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G          D  + L   H+K YQFL+IW LREYL+++L IPN  
Sbjct: 267  LCGQVGHLAAECRG---------GDDGANLTPIHQKKYQFLHIWVLREYLQYELDIPNPP 317

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+++FERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF+ MGGYLTDAGE
Sbjct: 318  FQLNFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMHIYRREFSAMGGYLTDAGE 377

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVE FIQ+VAVYE +IF+KRARIQQA EN + ++   R S     E  A   +  +
Sbjct: 378  VLLDRVERFIQSVAVYERQIFQKRARIQQAFENNEERQRNRRESCE---ELPAPVVEKVV 434

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEG 1081
                               DK+KLGE G+ ERYYAEKF     E +E V+KD+VLKY EG
Sbjct: 435  -------------------DKVKLGEPGYTERYYAEKFQVSKPEEVETVKKDLVLKYVEG 475

Query: 1082 LVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSAS 1261
            L WV RYYYQGVCSW W+YPYHYAPFASDL++L++LEI FFLG+PFKPFDQLMGTLP+AS
Sbjct: 476  LCWVCRYYYQGVCSWQWYYPYHYAPFASDLENLDDLEITFFLGEPFKPFDQLMGTLPAAS 535

Query: 1262 AQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIE 1441
              ALP+ YR+LMT+  SPI +FYP+D EIDMNGKRFAWQGV KLPFIDE +LLA+T K+E
Sbjct: 536  CSALPEKYRNLMTDPSSPICNFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAQTRKLE 595

Query: 1442 DSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMN 1621
             +LTEEE  RNS+  DLLF+  +HPLA  I   Y+ +  +    V     ID   SGGMN
Sbjct: 596  STLTEEELARNSVMLDLLFVYPSHPLASHITLYYQVYCQS-PPHVRLPWVIDTSLSGGMN 654

Query: 1622 GFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQ 1801
            GFL   +        PSPV+G  +ID NQ L V Y+ P +Q+HI +PP GV++PRK +  
Sbjct: 655  GFLWLSERNGFRNVIPSPVRGFPNIDHNQVLNVTYLLPVAQKHIPEPPRGVIMPRKVVKP 714

Query: 1802 HDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIK-SGASKSRE 1978
             DIK  P LWHEDNG R +  ++RP +PGAI+GP L EAAHRLV NTL ++ S AS    
Sbjct: 715  MDIKPPPALWHEDNGPRRYQNRDRPQIPGAIAGPMLGEAAHRLVKNTLNLRPSNASSGFW 774

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTPRRRPAGPPGYEQGF 2107
               +  R  S N  ++   P +       R RPAGP GYE+GF
Sbjct: 775  DQPRPLRTTSGN--YIGNYPVN-------RPRPAGPSGYERGF 808


>gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis]
          Length = 957

 Score =  821 bits (2120), Expect = 0.0
 Identities = 425/700 (60%), Positives = 496/700 (70%), Gaps = 2/700 (0%)
 Frame = +2

Query: 14   EKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGEHKIM 193
            EKSE  DSNVITPGT+FMA LS+ALQYYI  RLN + GW++ KVILSDSNVPGEGEHKIM
Sbjct: 151  EKSETSDSNVITPGTQFMAVLSVALQYYIQSRLNRNPGWRSTKVILSDSNVPGEGEHKIM 210

Query: 194  NYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCFLCGQ 373
             YIR QRNLPG DPNTRHCLYGLDADLIML+LATHEIHFSILRE++T PGQ+EKCF+CGQ
Sbjct: 211  TYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILRELITLPGQQEKCFVCGQ 270

Query: 374  AGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAAFEID 553
             GHLAAEC G PD      D         HK+ YQFLNIW LREYL+++L IP+  F+ID
Sbjct: 271  IGHLAAECRGKPDDP---LDWNVVDETPIHKRKYQFLNIWVLREYLQYELDIPDPPFDID 327

Query: 554  FERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGEVNLK 733
            FER+VDDFV +CFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF  MGGYLTDAGEV L 
Sbjct: 328  FERVVDDFVLLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFAAMGGYLTDAGEVLLD 387

Query: 734  RVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSINSLS 913
            RVEHFIQ+VAVYED+IF+KRARIQQA EN            NG    A  +  G   +L 
Sbjct: 388  RVEHFIQSVAVYEDQIFQKRARIQQAIEN------------NGEMRRAKREANGEQQTL- 434

Query: 914  TKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEGLVWV 1093
                   + E  P  DK+KLGE G+KERYYAEKFG  T E +++VRKD VLKY EGL WV
Sbjct: 435  -------VVEKAPVVDKVKLGEPGYKERYYAEKFGVSTPEKIDEVRKDTVLKYVEGLCWV 487

Query: 1094 MRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSASAQAL 1273
             +YYYQGVCSW W+YPYHYAPFASDLKDL ELEI FF+G+PFKPF+QLMGTLP+AS+ AL
Sbjct: 488  CQYYYQGVCSWKWYYPYHYAPFASDLKDLMELEITFFIGEPFKPFEQLMGTLPAASSSAL 547

Query: 1274 PKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIEDSLT 1453
            P+ YR+LMT+  SPI  FYP D EIDMNGKRF+WQGV KLPFIDE +LL    K+E +LT
Sbjct: 548  PEKYRNLMTDPSSPIYAFYPPDVEIDMNGKRFSWQGVAKLPFIDERKLLGAIRKLESTLT 607

Query: 1454 EEEKYRNSMHFDLLFLLITHPLAPFILRLYE-HHSSTCVEGVSNTEEIDPEYSGGMNGFL 1630
            EEE+ RNS+  DL ++   HPLA  I   Y+ +H       V     ID   SGGMNG+L
Sbjct: 608  EEEQIRNSVMNDLFYVHRAHPLASQIYIYYQLNHRMPQFTRVPCA--IDTNASGGMNGYL 665

Query: 1631 SPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQHDI 1810
              C+        PSP+ G +DI+ NQ L + Y+NP + RHI KPPNGV +P K +   DI
Sbjct: 666  WLCERSWMRNVVPSPISGFQDIEHNQVLTIAYLNPAAHRHIPKPPNGVFMPEKILNPIDI 725

Query: 1811 KSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRESCTQ 1990
            K  P+LWHEDN RR+   +ER  V GAI+GP+L EAAHRLV N+L +KS           
Sbjct: 726  KPFPVLWHEDNSRRNQ-YRERQQVSGAITGPQLGEAAHRLVKNSLNLKSN---------- 774

Query: 1991 QSRVQSHNNAFLLAMPSHSQKSY-TPRRRPAGPPGYEQGF 2107
                 SH+  +      +   SY   R RPAGP GYE+GF
Sbjct: 775  ----DSHSGLWEQPPSRNFPGSYPVTRSRPAGPSGYERGF 810


>ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
            gi|241920158|gb|EER93302.1| hypothetical protein
            SORBIDRAFT_01g005340 [Sorghum bicolor]
          Length = 990

 Score =  819 bits (2116), Expect = 0.0
 Identities = 428/710 (60%), Positives = 508/710 (71%), Gaps = 7/710 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +  KEKSEA DSNVITPGT+FM  LS ALQYYI  RLN+  GW+++K+ILSDSNVPGEGE
Sbjct: 147  LAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIMLALATHE+HFSILREV++ PGQ+EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVISMPGQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQAGHLAAEC GP         D + +L   HKK YQFLNIW LREYL  DL+I +A 
Sbjct: 267  LCGQAGHLAAECRGPSQP------DNSVELPPIHKKKYQFLNIWVLREYLAKDLEIVDAP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER++DDFVFMCFFVGNDFLPHMPTLEIREGAINLLM+ Y++EF +MGGYLTD GE
Sbjct: 321  FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMSIYRSEFTSMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVEHFIQ+VAV E++IF+KRARIQQA+EN + +    R ++               
Sbjct: 381  VILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHRIQRENS--------------- 425

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
                         E N + DK+KLGE G++ERYYAEKF  + + + ++ VR+DVV KY E
Sbjct: 426  -------------EENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQVRRDVVQKYVE 472

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLK L ELEI FFLG+PFKPFDQLMGTLP+A
Sbjct: 473  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAA 532

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LMT+ DSP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET K+
Sbjct: 533  SSNALPKYYGDLMTDPDSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDEMRLLAETRKL 592

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTE----EIDPEY 1606
            EDSLTEEE++RN   FD++++  THPL+  I+ LY+++       +S T+     I P  
Sbjct: 593  EDSLTEEERFRNRTMFDIIYVRDTHPLSSQIMFLYQNYYH-----LSRTDPYVIPIQPAV 647

Query: 1607 SGGMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPR 1786
            SGGMNGFL   +     V   SPV+G   I  N+ L   Y+NP   +HI +PP GV+IP 
Sbjct: 648  SGGMNGFLCLSERNWYIVTVTSPVRGFNGIAQNRVLNATYLNPQYHKHIPEPPAGVIIPA 707

Query: 1787 KTITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGAS 1966
            K +   D K  P+LWHEDN RR    +ERP V GA+SG  L  AAHRLV N+LQIKSG  
Sbjct: 708  KILKPSDFKPFPVLWHEDNSRRQ--TRERPQVSGALSGSLLGAAAHRLVKNSLQIKSG-- 763

Query: 1967 KSRESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFI 2110
                           N A L+ MP +    Y+P  R RPAGP GYE+GF+
Sbjct: 764  ---------------NAAGLIDMP-YRGAPYSPGNRPRPAGPLGYERGFV 797


>ref|XP_004981451.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Setaria italica]
          Length = 1024

 Score =  815 bits (2106), Expect = 0.0
 Identities = 460/883 (52%), Positives = 557/883 (63%), Gaps = 31/883 (3%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +  KEKSEA DSNVITPGT+FM  LS ALQYYI  RLN+  GW+++KVILSDSNVPGEGE
Sbjct: 147  LAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQLRLNHTLGWQSVKVILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIMLALATHE+HFSILREV++ PGQ+EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVISMPGQQEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D A +L   HKK YQFL+IW LREYL  DL+I +A 
Sbjct: 267  LCGQVGHLAAECRGPSQV------DSAVELPPIHKKKYQFLHIWVLREYLAKDLEIVDAP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER++DDFVFMCFFVGNDFLPHMPTLEIREGAINLLM+ Y+AEF +MGGYLTD GE
Sbjct: 321  FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMSIYRAEFISMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSA--NGYSEFAASQGK- 892
            V L RVEHFIQ+VA  E++IF+KRARIQQA+EN + +    R S   N Y +      K 
Sbjct: 381  VVLDRVEHFIQSVAFNEEQIFQKRARIQQARENNEERNKIQRESTEENQYVDKVCFSHKI 440

Query: 893  ----GSINSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKD 1057
                 S+ SL      +    +     ++KLGE G++ERYYAEKF  + + + ++ VR+D
Sbjct: 441  SEYVCSVMSLMIVSMKIVCCPSFSFYLQVKLGEPGYRERYYAEKFKEEAESKPIDQVRRD 500

Query: 1058 VVLKYTEGLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQL 1237
            VV KY EGL WVMRYYYQGVCSW WFYPYHYAPFASDLKDL ELEI FFLG+PFKPFDQL
Sbjct: 501  VVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKDLAELEITFFLGQPFKPFDQL 560

Query: 1238 MGTLPSASAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRL 1417
            MGTLP+AS+ ALPK Y  LMT+ +SP+  FYP D EIDMNGKRFAWQGV KLPFIDE RL
Sbjct: 561  MGTLPAASSNALPKYYGDLMTDPNSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDETRL 620

Query: 1418 LAETAKIEDSLTEEEKYRNSMHFDLLFLLITHPLA---PFILRLYEHHSSTCVEGVSNTE 1588
            LAET K+ED+LTEEEK+RN+  FD++++  THPL     F+ R+Y H   T    +    
Sbjct: 621  LAETRKLEDTLTEEEKFRNTTMFDIIYVRETHPLTAQIAFLYRMYNHLPRTDPYVI---- 676

Query: 1589 EIDPEYSGGMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPN 1768
             IDP  SGGMNGFL   +     +   SPVK    I  N+ L   Y+NP   +HI +PP 
Sbjct: 677  PIDPAASGGMNGFLCLSERNWYSITVTSPVKCFNGIAQNRVLNATYLNPQYHKHIPEPPV 736

Query: 1769 GVVIPRKTITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQ 1948
            GV++P K +   D K  P+LWHEDN RR    +ERP V GA+SG  L +AAHRLV N+LQ
Sbjct: 737  GVIVPGKILKPSDFKPFPVLWHEDNSRRQ--ARERPQVSGALSGSLLGQAAHRLVKNSLQ 794

Query: 1949 IKSGASKSRESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTET 2122
            IKSG++                 A LL MP +    Y P  R RPAGP GYE+GF+    
Sbjct: 795  IKSGSA-----------------AGLLEMP-YRGAPYGPGNRPRPAGPLGYERGFVDNPH 836

Query: 2123 XXXXXXXXXXXXXXXXXXXXXXXXXMPGTAYSNDK-----RQARSGSASYPVYVQGNDLV 2287
                                       G A +N +      +  SGS    ++   + L 
Sbjct: 837  HAHTSRSVPNSHPQFF-----------GDAQANRQPMRILERPNSGSHEAGIHASMSKLT 885

Query: 2288 PSIGP---------VNGYYPSSQTVHAGIPNGYSGIPTTNP-QGLPVXXXXXXXXXXXXV 2437
               GP          +GY+P+        PN Y+G P   P Q +               
Sbjct: 886  IHEGPRLHQNNRMQNSGYWPNQPH-----PNHYAGPPPQQPMQNISFTPQRPFQTGG--- 937

Query: 2438 QYHKDHLVQTIQPPMPPPTWF---PVRGNNSAPPLYSTPSQPN 2557
             + +   V  + PP+PP  W    P  G    P  +   + P+
Sbjct: 938  -FPQQRPVNGVPPPLPPSNWIGKQPTGGPPGVPAKHDPRTAPD 979


>gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
          Length = 990

 Score =  815 bits (2104), Expect = 0.0
 Identities = 430/710 (60%), Positives = 506/710 (71%), Gaps = 7/710 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +  KEKSEA DSNVITPGTEFM  LS ALQYYI  RLN+  GW+++K+ILSDSNVPGEGE
Sbjct: 147  LAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIMLALATHE+HFSILREV++ PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVHFSILREVISMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D + +L   HKK YQFLNIW LREYL  DL+I +A 
Sbjct: 267  LCGQVGHLAAECRGPSQP------DNSVELPPIHKKKYQFLNIWVLREYLAKDLEIIDAP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER++DDFVFMCFFVGNDFLPHMPTLEIREGAINLLM+ Y++EF +MGGYLTD GE
Sbjct: 321  FKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMSIYRSEFTSMGGYLTDVGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L RVEHFIQ+VAV E++IF+KRARIQQA+EN                           
Sbjct: 381  VILDRVEHFIQSVAVNEEQIFQKRARIQQAREN--------------------------- 413

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
            N    KM+  N +E + + DK+KLGE G++ERYYA+KF  + + + +  VR+DVV KY E
Sbjct: 414  NEEKHKMQREN-SEEDQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVE 472

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLK L ELEI FFLG+PFKPFDQLMGTLP+A
Sbjct: 473  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAA 532

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LM++ DSP+  FYP D EIDMNGKRFAWQGV KLPFIDE RLLAET K+
Sbjct: 533  SSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKL 592

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTE----EIDPEY 1606
            ED+LTEEEK+RN    D++++  THPL   I+ LY+++       +S T+     I+P  
Sbjct: 593  EDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYH-----LSRTDPYVIPIEPAA 647

Query: 1607 SGGMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPR 1786
            SGGMNGFL   +     V   SPVKG   I  N+ L   Y+NP   +HI +PP GV+IP 
Sbjct: 648  SGGMNGFLCLSERNWYSVTVTSPVKGFNGIAQNRVLNAAYLNPQYHKHIPEPPAGVIIPA 707

Query: 1787 KTITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGAS 1966
            K +   D K  P+LWH+DN RR   V+ERP V GA+SG  L EAAHRLV N+LQI+SG  
Sbjct: 708  KILKPSDFKPFPVLWHQDNSRRQ--VRERPQVSGALSGSLLGEAAHRLVKNSLQIRSG-- 763

Query: 1967 KSRESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFI 2110
                           N A LL MP +    Y P  R RPAGP GYE+GF+
Sbjct: 764  ---------------NAAGLLYMP-YRGAPYGPGNRPRPAGPLGYERGFV 797


>gb|EMS54431.1| 5'-3' exoribonuclease 4 [Triticum urartu]
          Length = 1362

 Score =  814 bits (2103), Expect = 0.0
 Identities = 424/706 (60%), Positives = 504/706 (71%), Gaps = 3/706 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +V KEKSEA DSNVITPGT FM  LS ALQYYI  RLN+  GW+++KVILSDSNVPGEGE
Sbjct: 147  LVRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHSPGWQSVKVILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRH LYGLDADLIMLALATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIMLALATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D   +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECQGPGPA------DNVVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+ ERI+DDFVF+CFFVGNDFLPHMPTLEIREGAINLLM  Y+AEF  MGGYLTD GE
Sbjct: 321  FKINLERILDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMNIYRAEFKPMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L+RVEHFIQAVA++E++IF KRARIQ+A EN + +R               +QG+ S 
Sbjct: 381  VLLERVEHFIQAVAIHEEQIFRKRARIQKAYENNEDRRR--------------AQGENS- 425

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
                         E N + D +KLGE G++ERYYAEKF  + + + ++ V++DVV KY E
Sbjct: 426  -------------EENQYVDMVKLGEPGYRERYYAEKFREEAESKPIDQVQRDVVQKYAE 472

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLK+L E EI FFLG+PFKPFDQLMGTLP+A
Sbjct: 473  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKNLTEFEITFFLGQPFKPFDQLMGTLPAA 532

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LMT+ +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET K+
Sbjct: 533  SSNALPKHYGDLMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKL 592

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGM 1618
            ED+LTEEE++RN+  FD++++  THPLA  I  LY+ +S   +   S    IDP  SGGM
Sbjct: 593  EDTLTEEERFRNTTMFDIIYVRETHPLAAQIAFLYQMYSQQMIADPSYCIPIDPAASGGM 652

Query: 1619 NGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTIT 1798
            NGFL   +     +   SPVKG   I +N+ L   Y+NP   +HI +PP G +IP K + 
Sbjct: 653  NGFLCLSQRNWYSISVGSPVKGFNGITNNRVLNATYVNPQYHKHIPEPPEGAIIPPKILK 712

Query: 1799 QHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRE 1978
             +D K  P+LWHEDN RR    ++RP V GA++G  L EAAHRL+ N+LQIKSG+S    
Sbjct: 713  PYDFKPFPVLWHEDNSRRQ--TRDRPQVHGALTGSVLGEAAHRLLKNSLQIKSGSS---- 766

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFI 2110
                         A LL +P +    Y P  R RP+GP GYE+GF+
Sbjct: 767  -------------AGLLHVP-YGAAPYGPGNRARPSGPLGYERGFV 798


>ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] gi|50400038|gb|AAT76426.1|
            putative 5'-3' exonuclease [Oryza sativa Japonica Group]
            gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa
            Japonica Group]
          Length = 988

 Score =  814 bits (2103), Expect = 0.0
 Identities = 463/898 (51%), Positives = 551/898 (61%), Gaps = 24/898 (2%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +VAKEKSEA DSNVITPGT FM  LS ALQYYI  RLN+  GW+++KV+LSDSNVPGEGE
Sbjct: 147  LVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIML+LATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G      G+ D    +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECRG-----SGQADKTV-ELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER+VDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF +MGGYLTD GE
Sbjct: 321  FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMNIYRREFTSMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQA-QENMDAQRMKGRSSANGYSEFAASQGKGS 898
            V L RVEHFIQ+VAV+E++IF+KRARIQ+A Q N +  R++  +S               
Sbjct: 381  VLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERNRVQTENS--------------- 425

Query: 899  INSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYT 1075
                          E+N + DK+KLGE G++ RYYAEKF  + + + ++ V++DVV KY 
Sbjct: 426  --------------EDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYV 471

Query: 1076 EGLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPS 1255
            EGL WVMRYYYQGVCSW WFYPYHYAPFASDLK L ELEI FFLG+PFKPFDQLMGTLP+
Sbjct: 472  EGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPA 531

Query: 1256 ASAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAK 1435
            AS+ ALPK Y  LM + +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET K
Sbjct: 532  ASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQK 591

Query: 1436 IEDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGG 1615
            +E++LT+EE++RN   FD+L++  THPLA  I  LY+  S +     S    IDP  SGG
Sbjct: 592  LEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQS--PNASYIIPIDPAASGG 649

Query: 1616 MNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTI 1795
            MNGFL   +     +   SPVKG   I  N+ L   Y+NP   +HI +PP GV+IP K +
Sbjct: 650  MNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKIL 709

Query: 1796 TQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSR 1975
               D K  PILWHEDN RR    +ERP V GA+SG  L EAAHRLV N+LQIKSG S   
Sbjct: 710  KPSDFKPFPILWHEDNSRRQ--PRERPQVSGALSGSVLGEAAHRLVKNSLQIKSGYS--- 764

Query: 1976 ESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTE---TXXXXXX 2140
                          A LL MP +    Y P  R RPAGP GYE+GF+             
Sbjct: 765  --------------AGLLDMP-YRGAPYGPGNRPRPAGPLGYERGFVENSYNGHMSRSVP 809

Query: 2141 XXXXXXXXXXXXXXXXXXXMPGTAYSNDKRQARSGSASYPVYVQGNDLVPSIGPVNGYYP 2320
                               +    Y N+     SG +   +        P +   N    
Sbjct: 810  NSHPQFFGDAQANRQNVRILERPNYRNNDSAIHSGMSQLTIQDG-----PRMHQNNRMQN 864

Query: 2321 SSQTVHAGIPNGYSGIPTTNPQ-------GLPVXXXXXXXXXXXXVQYHKDHLVQTIQPP 2479
            S  + +   PN Y+G P   P          P             +       V  IQPP
Sbjct: 865  SGFSPNQPHPNQYAGFPPQRPMQNSGFTPQRPAQYSGFPHQRPVQIGLQHQPAVNGIQPP 924

Query: 2480 MPPPTWF--PVRGNNSAPP--------LYSTPSQPNVRQVHVPVFYGDDNRFQPKGQG 2623
            +PP  W   P+ G  +  P        +   P Q N R  H          ++ KGQG
Sbjct: 925  LPPSAWIGRPISGVPAGVPAKQDPRMAMDRQPKQDNSRSQHDKRQQATKVVYRVKGQG 982


>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
            gi|548830590|gb|ERM93513.1| hypothetical protein
            AMTR_s00004p00046450 [Amborella trichopoda]
          Length = 936

 Score =  813 bits (2100), Expect = 0.0
 Identities = 417/703 (59%), Positives = 493/703 (70%), Gaps = 2/703 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +  +E+ E  DSNVITPGT+FMA LS ALQYYIH RLN + GW N KVILSD+NVPGEGE
Sbjct: 147  LAPREERETSDSNVITPGTKFMAVLSAALQYYIHSRLNYNLGWSNTKVILSDTNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QR+LPG +PNTRHCLYGLDADLIML+LATHE+HFSILREVVT PGQ++KCF
Sbjct: 207  HKIMSYIRLQRDLPGFNPNTRHCLYGLDADLIMLSLATHEVHFSILREVVTMPGQQDKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
             CGQ GHLAAEC G       E +  A+     HKK YQFLN+W LREYL++DL IP+  
Sbjct: 267  NCGQVGHLAAECNGKLGEHSTELEGKATNDTPIHKKKYQFLNVWILREYLKYDLDIPDPP 326

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            FE++FERIVDDFVF+CFFVGNDFLPHMPTLEIREGAINLLMA Y+ EF  MGGYLTDAGE
Sbjct: 327  FEVNFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMAVYRREFGVMGGYLTDAGE 386

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            VNL RVEHF Q+V +YED+IF+KRARIQQA EN +  + K R          A +   S+
Sbjct: 387  VNLGRVEHFSQSVGIYEDQIFQKRARIQQAFENNEELKFKMRRK-------PAEEPPVSV 439

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEG 1081
                               DKIKLGE G+KERYYAEKFG    E +  VR +VVLKY EG
Sbjct: 440  ------------------PDKIKLGEPGYKERYYAEKFGVNAPEKIATVRDEVVLKYVEG 481

Query: 1082 LVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSAS 1261
            L W MRYYYQGVCSW WFYPYHYAP ASDLK+L +LEI FF+G+PFKPFDQLMGTLP+ S
Sbjct: 482  LCWAMRYYYQGVCSWLWFYPYHYAPLASDLKNLADLEITFFMGEPFKPFDQLMGTLPAKS 541

Query: 1262 AQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIE 1441
            A ALPK YR +MT+  SPI  FYP+D EIDMNGKRF+WQG+ KLPFIDE  L AET K+E
Sbjct: 542  ADALPKYYRLMMTDPTSPIKCFYPSDFEIDMNGKRFSWQGIAKLPFIDEVLLCAETRKLE 601

Query: 1442 DSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMN 1621
             +LTEEE+ RNS+ +DLLF+   HPLA  I  LY       + G     +IDP YSGGMN
Sbjct: 602  CTLTEEERIRNSIMYDLLFVSHLHPLAVQISPLYYMLYHVPI-GARPAYQIDPNYSGGMN 660

Query: 1622 GFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQ 1801
            G+L  C+         SP+KG+ +++ NQ +   Y +PP  +HI +PP GV +P K +T 
Sbjct: 661  GYLWLCERNVFREFIVSPIKGLRNVERNQVVNATYFSPPPHKHIPEPPEGVRMPEKFLTP 720

Query: 1802 HDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRES 1981
             DIK  P+LWHEDN  R   V+ERP VP AISGP L EA HRL+ NTLQI+    ++   
Sbjct: 721  QDIKPFPVLWHEDNSSRRQQVRERPQVPRAISGPLLGEAVHRLLKNTLQIRPNGPRT--- 777

Query: 1982 CTQQSRVQSHNNAFLLAMPSHSQKSYTPRRRP--AGPPGYEQG 2104
                 R Q +N   +   P  +     P  +P  AGP GYE+G
Sbjct: 778  ----IRPQYNNGPGIFESPYKAPLPNFPHYKPRLAGPLGYERG 816


>dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1014

 Score =  813 bits (2100), Expect = 0.0
 Identities = 423/706 (59%), Positives = 505/706 (71%), Gaps = 3/706 (0%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +V KEKSEA DSNVITPGT FM  LS ALQYYI  RLN+  GW+++KVILSDSNVPGEGE
Sbjct: 147  LVRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHSPGWQSVKVILSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRH LYGLDADLIMLALATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIMLALATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC GP         D   +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECQGPGPA------DNVVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+ ERI+DDFVF+CFFVGNDFLPHMPTLEIREGAINLLM  Y+AEF  MGGYLTD GE
Sbjct: 321  FKINLERILDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMNIYRAEFKPMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L+RVEHFIQAVA++E++IF KRARIQ+A EN + +R               +QG    
Sbjct: 381  VLLERVEHFIQAVAIHEEQIFRKRARIQKAYENNEDRRR--------------AQG---- 422

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKYTE 1078
                      +++E N + D +KLGE G++ERYYAEKF  + + + ++ V++DVV KY E
Sbjct: 423  ----------DISEENQYVDMVKLGEPGFRERYYAEKFREEAESKPIDQVQRDVVQKYVE 472

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WVMRYYYQGVCSW WFYPYHYAPFASDLK L E EI FFLG+PFKPFDQLMGTLP+A
Sbjct: 473  GLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKSLTEFEITFFLGQPFKPFDQLMGTLPAA 532

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALPK Y  LMT+ +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET K+
Sbjct: 533  SSNALPKHYGDLMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKL 592

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGM 1618
            ED+LTEEE++RN+  FD++++  THPL+  I  LY+ +S   +   S    IDP  SGGM
Sbjct: 593  EDTLTEEERFRNTTMFDIIYVRETHPLSAHIALLYQMYSQQMITDPSYCLPIDPAASGGM 652

Query: 1619 NGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTIT 1798
            NGFL   +     +   SPVKG   I +N+ L   Y++P   +HI +PP GV+IP K + 
Sbjct: 653  NGFLCLSQRNWYSISVESPVKGFNGITNNRVLNATYVSPQYHKHIPEPPEGVIIPPKILK 712

Query: 1799 QHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRE 1978
             +D K  PILWHEDN RR    ++RP V GA++G  L EAAHRL+ N+LQIKSG+S    
Sbjct: 713  PYDFKPFPILWHEDNSRRQ--TRDRPQVHGALTGSVLGEAAHRLLKNSLQIKSGSS---- 766

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFI 2110
                         A LL +P +    Y P  R RP+GP GYE+GF+
Sbjct: 767  -------------AGLLHVP-YGAAPYGPGHRARPSGPLGYERGFV 798


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  812 bits (2098), Expect = 0.0
 Identities = 416/699 (59%), Positives = 490/699 (70%)
 Frame = +2

Query: 11   KEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGEHKI 190
            KEK E  DSNVITPGT+FMA LS  LQYY+  RLN++ GWK  KVILSD+NVPGEGEHK+
Sbjct: 150  KEKPETSDSNVITPGTQFMAVLSTGLQYYVQMRLNHNPGWKYTKVILSDANVPGEGEHKV 209

Query: 191  MNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCFLCG 370
            M+YIR QRNL G +PNTRHCLYGLDADLIMLALATHEIHFSILRE+VTFPGQ+EKCF CG
Sbjct: 210  MSYIRLQRNLSGFNPNTRHCLYGLDADLIMLALATHEIHFSILREMVTFPGQQEKCFSCG 269

Query: 371  QAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAAFEI 550
            Q GHLAA+C G P   +   D         HKK YQFLNIW LREYL+++L +PN   EI
Sbjct: 270  QTGHLAADCRGKPG--DNPLDWNVEDDVPIHKKKYQFLNIWVLREYLQYELDVPNPPLEI 327

Query: 551  DFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGEVNL 730
            +FERI+DDFVF+CFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF+ MGGYLTDAGEVNL
Sbjct: 328  NFERILDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFSAMGGYLTDAGEVNL 387

Query: 731  KRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSINSL 910
             RVEHFIQ+VA+YE++IF+KR RIQQ  EN +  R+K R                     
Sbjct: 388  DRVEHFIQSVAIYEEQIFQKRTRIQQFLENNEEMRLKAR--------------------- 426

Query: 911  STKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEGLVW 1090
                R  +     P  DK+KLGE G+KERYYAEKFG  T + ++ VR DVVLKY EGL W
Sbjct: 427  ----RESSEEIQTPAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDVVLKYVEGLCW 482

Query: 1091 VMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSASAQA 1270
            V RYYYQGVCSW WFYPYHYAPFASDLK L +LEI FFLG+PFKPFDQLMGTLP+AS+ A
Sbjct: 483  VCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQLMGTLPAASSNA 542

Query: 1271 LPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIEDSL 1450
            LP+ YR LMT+S SPI  F+P D EIDMNGKRFAWQG+ KLPFIDE +LLA+T K+E +L
Sbjct: 543  LPEEYRKLMTDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTL 602

Query: 1451 TEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMNGFL 1630
            TEEE+ RNS+  DLL++   HP+A  ++  Y+  +S   +       ID   S GMNG+L
Sbjct: 603  TEEERLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNS-LPQYQRKPWAIDTNASAGMNGYL 661

Query: 1631 SPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQHDI 1810
               +         SPV G  DI+ NQ L + Y+NP + RHI +PPNGVV+P K +   DI
Sbjct: 662  WLSERNMWRSTIASPVNGFPDIEHNQVLNITYLNPINHRHIPEPPNGVVMPEKILKPLDI 721

Query: 1811 KSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRESCTQ 1990
            K  P+LWHED+G R    +ERP V  AI+GP L EAAHRLV NTL I+   S S+    Q
Sbjct: 722  KPFPMLWHEDHGGRRQQGRERPQVARAIAGPLLGEAAHRLVKNTLNIRPNGSSSKFLEQQ 781

Query: 1991 QSRVQSHNNAFLLAMPSHSQKSYTPRRRPAGPPGYEQGF 2107
              R    N+ F              R RPAGP GYE+G+
Sbjct: 782  TYRNIPGNSTF-------------NRPRPAGPSGYERGY 807


>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
            gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
            protein [Populus trichocarpa]
          Length = 948

 Score =  811 bits (2096), Expect = 0.0
 Identities = 418/703 (59%), Positives = 494/703 (70%), Gaps = 4/703 (0%)
 Frame = +2

Query: 11   KEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGEHKI 190
            KEK E  DSNVITPGT+FMA LSIALQYYI  RLN++ GW+N KVILSD+NVPGEGEHKI
Sbjct: 150  KEKPETRDSNVITPGTQFMAVLSIALQYYIQSRLNHNPGWQNTKVILSDANVPGEGEHKI 209

Query: 191  MNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCFLCG 370
            M+YIR QRN+PG +PNTRHCLYGLDADLIML+LATHE+HFSILRE+V FPGQ++KCFLCG
Sbjct: 210  MSYIRLQRNIPGFNPNTRHCLYGLDADLIMLSLATHEVHFSILREMVIFPGQQDKCFLCG 269

Query: 371  QAGHLAAECVGPPDTEEGE----TDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNA 538
            QAGHLAAEC G    +  +     D P       HKK YQFLNIW LREYL++DL IPN 
Sbjct: 270  QAGHLAAECRGKQGDDALDWNVVDDTPI------HKKKYQFLNIWVLREYLQYDLDIPNP 323

Query: 539  AFEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAG 718
             F IDFE+IVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF+ MGGYLT AG
Sbjct: 324  PFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMHIYRREFSAMGGYLTLAG 383

Query: 719  EVNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGS 898
            EV L +VEHFIQ+VAVYE++IF+KRARIQQA EN +  + K R                 
Sbjct: 384  EVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENNEEMKHKAR----------------- 426

Query: 899  INSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTE 1078
                    R+++     P  DK+KLGE G+KERYYAEKF    +E ++ V KDVVLKY E
Sbjct: 427  --------RDLSEEIQAPPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKYVE 478

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WV RYYYQGVCSW WFYPYHYAPFASD+KDL+E+EI FFLG+PFKPFDQLMGTLP+A
Sbjct: 479  GLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQLMGTLPAA 538

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALP+ YR LMT+  SPI  F+P+D EIDMNGKRFAWQG+ KLPFIDE +LLA+T K+
Sbjct: 539  SSNALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKL 598

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGM 1618
            E +L EEE+ RNS+  DLL++   HPL+  ++  Y HH+           +ID   SGGM
Sbjct: 599  ERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYY-HHNYRLPVSERIALKIDTRASGGM 657

Query: 1619 NGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTIT 1798
            NG+L   +        PSP+ G+  ++ NQ L + Y+ P S RHI +PP GVV+P K + 
Sbjct: 658  NGYLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEGVVMPEKILK 717

Query: 1799 QHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRE 1978
              DIK  P LWHEDNGRR    +ERP VP A++GP L EAAHRLV NTL IK   S SR 
Sbjct: 718  PTDIKLFPTLWHEDNGRRQQ-GRERPQVPRAVAGPVLGEAAHRLVKNTLNIKPNGSSSRG 776

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTPRRRPAGPPGYEQGF 2107
            + T                          R RPAGP GY +G+
Sbjct: 777  NYTFN------------------------RPRPAGPAGYGRGY 795


>ref|XP_002328516.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  808 bits (2088), Expect = 0.0
 Identities = 417/703 (59%), Positives = 493/703 (70%), Gaps = 4/703 (0%)
 Frame = +2

Query: 11   KEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGEHKI 190
            KEK E  DSNVITPGT+FMA LSIALQYYI  RLN++ GW+N KVILSD+NVPGEGEHKI
Sbjct: 150  KEKPETRDSNVITPGTQFMAVLSIALQYYIQSRLNHNPGWQNTKVILSDANVPGEGEHKI 209

Query: 191  MNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCFLCG 370
            M+YIR QRN+PG + NTRHCLYGLDADLIML+LATHE+HFSILRE+V FPGQ++KCFLCG
Sbjct: 210  MSYIRLQRNIPGFNSNTRHCLYGLDADLIMLSLATHEVHFSILREMVIFPGQQDKCFLCG 269

Query: 371  QAGHLAAECVGPPDTEEGE----TDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNA 538
            QAGHLAAEC G    +  +     D P       HKK YQFLNIW LREYL++DL IPN 
Sbjct: 270  QAGHLAAECRGKQGDDALDWNVVDDTPI------HKKKYQFLNIWVLREYLQYDLDIPNP 323

Query: 539  AFEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAG 718
             F IDFE+IVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF+ MGGYLT AG
Sbjct: 324  PFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMHIYRREFSAMGGYLTLAG 383

Query: 719  EVNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGS 898
            EV L +VEHFIQ+VAVYE++IF+KRARIQQA EN +  + K R                 
Sbjct: 384  EVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENNEEMKHKAR----------------- 426

Query: 899  INSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTE 1078
                    R+++     P  DK+KLGE G+KERYYAEKF    +E ++ V KDVVLKY E
Sbjct: 427  --------RDLSEEIQAPPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKYVE 478

Query: 1079 GLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSA 1258
            GL WV RYYYQGVCSW WFYPYHYAPFASD+KDL+E+EI FFLG+PFKPFDQLMGTLP+A
Sbjct: 479  GLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQLMGTLPAA 538

Query: 1259 SAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKI 1438
            S+ ALP+ YR LMT+  SPI  F+P+D EIDMNGKRFAWQG+ KLPFIDE +LLA+T K+
Sbjct: 539  SSNALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKL 598

Query: 1439 EDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGM 1618
            E +L EEE+ RNS+  DLL++   HPL+  ++  Y HH+           +ID   SGGM
Sbjct: 599  ERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYY-HHNYRLPVSERIALKIDTRASGGM 657

Query: 1619 NGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTIT 1798
            NG+L   +        PSP+ G+  ++ NQ L + Y+ P S RHI +PP GVV+P K + 
Sbjct: 658  NGYLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEGVVMPEKILK 717

Query: 1799 QHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKSRE 1978
              DIK  P LWHEDNGRR    +ERP VP A++GP L EAAHRLV NTL IK   S SR 
Sbjct: 718  PTDIKLFPTLWHEDNGRRQQ-GRERPQVPRAVAGPVLGEAAHRLVKNTLNIKPNGSSSRG 776

Query: 1979 SCTQQSRVQSHNNAFLLAMPSHSQKSYTPRRRPAGPPGYEQGF 2107
            + T                          R RPAGP GY +G+
Sbjct: 777  NYTFN------------------------RPRPAGPAGYGRGY 795


>gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
          Length = 997

 Score =  807 bits (2085), Expect = 0.0
 Identities = 463/899 (51%), Positives = 551/899 (61%), Gaps = 25/899 (2%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +VAKEKSEA DSNVITPGT FM  LS ALQYYI  RLN+  GW+++KV+LSDSNVPGEGE
Sbjct: 147  LVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIML+LATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G      G+ D    +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECRG-----SGQADKTV-ELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER+VDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF +MGGYLTD GE
Sbjct: 321  FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMNIYRREFTSMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQA-QENMDAQRMKGRSSA-NGYSEFAASQGKG 895
            V L RVEHFIQ+VAV+E++IF+KRARIQ+A Q N +  R++  +S  N Y + A  +  G
Sbjct: 381  VLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERNRVQTENSEDNQYVDKAGFKTLG 440

Query: 896  SINSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKY 1072
                                   +KLGE G++ RYYAEKF  + + + ++ V++DVV KY
Sbjct: 441  F---------------------PVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKY 479

Query: 1073 TEGLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLP 1252
             EGL WVMRYYYQGVCSW WFYPYHYAPFASDLK L ELEI FFLG+PFKPFDQLMGTLP
Sbjct: 480  VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLP 539

Query: 1253 SASAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETA 1432
            +AS+ ALPK Y  LM + +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET 
Sbjct: 540  AASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 599

Query: 1433 KIEDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSG 1612
            K+E++LT+EE++RN   FD+L++  THPLA  I  LY+  S +     S    IDP  SG
Sbjct: 600  KLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQS--PNASYIIPIDPAASG 657

Query: 1613 GMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKT 1792
            GMNGFL   +     +   SPVKG   I  N+ L   Y+NP   +HI +PP GV+IP K 
Sbjct: 658  GMNGFLCLSERNCYSIAVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKI 717

Query: 1793 ITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKS 1972
            +   D K  PILWHEDN RR    +ERP V GA+SG  L EAAHRLV N+LQIKSG S  
Sbjct: 718  LKPSDFKPFPILWHEDNSRRQ--PRERPQVSGALSGSVLGEAAHRLVKNSLQIKSGYS-- 773

Query: 1973 RESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTE---TXXXXX 2137
                           A LL MP +    Y P  R RPAGP GYE+GF+            
Sbjct: 774  ---------------AGLLDMP-YRGAPYGPGNRPRPAGPLGYERGFVENSYNGHMSRSV 817

Query: 2138 XXXXXXXXXXXXXXXXXXXXMPGTAYSNDKRQARSGSASYPVYVQGNDLVPSIGPVNGYY 2317
                                +    Y N+     SG +   +        P +   N   
Sbjct: 818  PNSHPQFFGDAQANRQNVRILERPNYRNNDSAIHSGMSQLTIQDG-----PRMHQNNRMQ 872

Query: 2318 PSSQTVHAGIPNGYSGIPTTNPQ-------GLPVXXXXXXXXXXXXVQYHKDHLVQTIQP 2476
             S  + +   PN Y+G P   P          P             +       V  IQP
Sbjct: 873  NSGFSPNQPHPNQYAGFPPQRPMQNSGFTPQRPAQYSGFPHQRPVQIGLQHQPAVNGIQP 932

Query: 2477 PMPPPTWF--PVRGNNSAPP--------LYSTPSQPNVRQVHVPVFYGDDNRFQPKGQG 2623
            P+PP  W   P+ G  +  P        +   P Q N R  H          ++ KGQG
Sbjct: 933  PLPPSAWIGRPISGVPAGVPAKQDPRMAMDRQPKQDNSRSQHDKRQQATKVVYRVKGQG 991


>gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
          Length = 997

 Score =  807 bits (2084), Expect = 0.0
 Identities = 463/899 (51%), Positives = 551/899 (61%), Gaps = 25/899 (2%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            +VAKEKSEA DSNVITPGT FM  LS ALQYYI  RLN+  GW+++KV+LSDSNVPGEGE
Sbjct: 147  LVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGE 206

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIML+LATHE+HFSILREV+T PGQ EKCF
Sbjct: 207  HKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITMPGQHEKCF 266

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            LCGQ GHLAAEC G      G+ D    +L   HKK YQFLNIW LREYLE DL+I +  
Sbjct: 267  LCGQVGHLAAECRG-----SGQADKTV-ELPPIHKKKYQFLNIWVLREYLEKDLEIVDPP 320

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            F+I+FER+VDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM  Y+ EF +MGGYLTD GE
Sbjct: 321  FKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMNIYRREFTSMGGYLTDGGE 380

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQA-QENMDAQRMKGRSSA-NGYSEFAASQGKG 895
            V L RVEHFIQ+VAV+E++IF+KRARIQ+A Q N +  R++  +S  N Y + A  +  G
Sbjct: 381  VLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERNRVQTENSEDNQYVDKAGFKTLG 440

Query: 896  SINSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQ-EVMEDVRKDVVLKY 1072
                                   +KLGE G++ RYYAEKF  + + + ++ V++DVV KY
Sbjct: 441  F---------------------PVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKY 479

Query: 1073 TEGLVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLP 1252
             EGL WVMRYYYQGVCSW WFYPYHYAPFASDLK L ELEI FFLG+PFKPFDQLMGTLP
Sbjct: 480  VEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLP 539

Query: 1253 SASAQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETA 1432
            +AS+ ALPK Y  LM + +SP+  FYP D EIDMNGKRFAWQG+ KLPFIDE RLLAET 
Sbjct: 540  AASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQ 599

Query: 1433 KIEDSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSG 1612
            K+E++LT+EE++RN   FD+L++  THPLA  I  LY+  S +     S    IDP  SG
Sbjct: 600  KLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQS--PNASYIIPIDPAASG 657

Query: 1613 GMNGFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKT 1792
            GMNGFL   +     +   SPVKG   I  N+ L   Y+NP   +HI +PP GV+IP K 
Sbjct: 658  GMNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKI 717

Query: 1793 ITQHDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGASKS 1972
            +   D K  PILWHEDN RR    +ERP V GA+SG  L EAAHRLV N+LQIKSG S  
Sbjct: 718  LKPSDFKPFPILWHEDNSRRQ--PRERPQVSGALSGSVLGEAAHRLVKNSLQIKSGYS-- 773

Query: 1973 RESCTQQSRVQSHNNAFLLAMPSHSQKSYTP--RRRPAGPPGYEQGFISTE---TXXXXX 2137
                           A LL MP +    Y P  R RPAGP GYE+GF+            
Sbjct: 774  ---------------AGLLDMP-YRGAPYGPGNRPRPAGPLGYERGFVENSYNGHMSRSV 817

Query: 2138 XXXXXXXXXXXXXXXXXXXXMPGTAYSNDKRQARSGSASYPVYVQGNDLVPSIGPVNGYY 2317
                                +    Y N+     SG +   +        P +   N   
Sbjct: 818  PNSHPQFFGDAQANRQNVRILERPNYRNNDSAIHSGMSQLTIQDG-----PRMHQNNRMQ 872

Query: 2318 PSSQTVHAGIPNGYSGIPTTNPQ-------GLPVXXXXXXXXXXXXVQYHKDHLVQTIQP 2476
             S  + +   PN Y+G P   P          P             +       V  IQP
Sbjct: 873  NSGFSPNQPHPNQYAGFPPQRPMQNSGFTPQRPAQYSGFPHQRPVQIGLQHQPAVNGIQP 932

Query: 2477 PMPPPTWF--PVRGNNSAPP--------LYSTPSQPNVRQVHVPVFYGDDNRFQPKGQG 2623
            P+PP  W   P+ G  +  P        +   P Q N R  H          ++ KGQG
Sbjct: 933  PLPPSAWIGRPISGVPAGVPAKQDPRMAMDRQPKQDNSRSQHDKRQQATKVVYRVKGQG 991


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  805 bits (2078), Expect = 0.0
 Identities = 402/655 (61%), Positives = 483/655 (73%)
 Frame = +2

Query: 2    MVAKEKSEAHDSNVITPGTEFMATLSIALQYYIHHRLNNDRGWKNLKVILSDSNVPGEGE 181
            + +KEK+E HDSNVITPGT FMA LS+ALQYYI  RLN + GW+N KV+LSDSNVPGEGE
Sbjct: 148  LTSKEKTETHDSNVITPGTPFMAVLSVALQYYIQTRLNYNPGWRNTKVMLSDSNVPGEGE 207

Query: 182  HKIMNYIRSQRNLPGSDPNTRHCLYGLDADLIMLALATHEIHFSILREVVTFPGQKEKCF 361
            HKIM+YIR QRNLPG DPNTRHCLYGLDADLIML+LATHEIHFSILREV+TFPGQ+EKC+
Sbjct: 208  HKIMDYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEIHFSILREVITFPGQQEKCY 267

Query: 362  LCGQAGHLAAECVGPPDTEEGETDDPASKLASPHKKPYQFLNIWTLREYLEFDLKIPNAA 541
            +CGQ GHLAAEC G P   +   D P       HKK YQFL+IW LREYL+++L IP+  
Sbjct: 268  MCGQVGHLAAECRGKPG--DNALDWPVDDTPI-HKKKYQFLHIWVLREYLQYELLIPDPP 324

Query: 542  FEIDFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMAAYKAEFNTMGGYLTDAGE 721
            FEIDFERIVDDFVF+CFFVGNDFLPHMPTLEIREGA+NLLM  Y+ EF  MGGYLTDAGE
Sbjct: 325  FEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAVNLLMHIYRKEFTAMGGYLTDAGE 384

Query: 722  VNLKRVEHFIQAVAVYEDKIFEKRARIQQAQENMDAQRMKGRSSANGYSEFAASQGKGSI 901
            V L+RVE+FIQ VAV+E++IF+KR RIQQ+QE  +  R + R            + + S+
Sbjct: 385  VFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFNEGMRARARGEM-------PEEPRASV 437

Query: 902  NSLSTKMRNMNMTENNPHADKIKLGEAGWKERYYAEKFGAKTQEVMEDVRKDVVLKYTEG 1081
                               DK+KLG+ G+ ERYYAEKFGA   E+ E ++KD+VLKY EG
Sbjct: 438  ------------------VDKVKLGQPGYTERYYAEKFGASDPEI-ERIKKDIVLKYVEG 478

Query: 1082 LVWVMRYYYQGVCSWNWFYPYHYAPFASDLKDLEELEIIFFLGKPFKPFDQLMGTLPSAS 1261
            L WV RYYYQGVCSW W+YPYHYAPFASDLKDL +LEI FF+G+PF+PFDQLMGTLPS+S
Sbjct: 479  LCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSS 538

Query: 1262 AQALPKPYRSLMTNSDSPIIDFYPTDCEIDMNGKRFAWQGVVKLPFIDEGRLLAETAKIE 1441
            + ALP+ YR LM N  SPI+ FYP+D EIDMNGK+++WQGV KLPFIDE +LL+ T  +E
Sbjct: 539  SSALPERYRDLMINPSSPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLE 598

Query: 1442 DSLTEEEKYRNSMHFDLLFLLITHPLAPFILRLYEHHSSTCVEGVSNTEEIDPEYSGGMN 1621
             +LTEEE+ RNS   DLL++   H L P IL  Y+++S            IDP  S GMN
Sbjct: 599  GTLTEEEQLRNSKMLDLLYVSRAHKLVPHILFYYQNYSH-LPHQQRPVLPIDPSASDGMN 657

Query: 1622 GFLSPCKGKPCPVKYPSPVKGMEDIDSNQALQVIYMNPPSQRHITKPPNGVVIPRKTITQ 1801
            GFL   +         SP+KG++DI  NQ L + Y+NP + RHI KPP+GVV+P+K +  
Sbjct: 658  GFLWSYERNVFRTVVSSPIKGLQDIACNQVLNITYLNPRTHRHIPKPPDGVVMPQKILRA 717

Query: 1802 HDIKSAPILWHEDNGRRHHVVQERPPVPGAISGPRLMEAAHRLVCNTLQIKSGAS 1966
             DIK  P+LWHEDN RRH   +ER  VPGAI+GP+L EAAHRLV N+LQ  +  S
Sbjct: 718  LDIKPLPVLWHEDNSRRHQ-ARERQQVPGAIAGPQLGEAAHRLVRNSLQFNNNTS 771