BLASTX nr result

ID: Ephedra28_contig00003288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003288
         (873 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77914.1| unknown [Picea sitchensis]                             110   5e-22
gb|ABR17366.1| unknown [Picea sitchensis]                             108   2e-21
ref|XP_006846631.1| hypothetical protein AMTR_s00156p00055010 [A...    96   1e-17

>gb|ADE77914.1| unknown [Picea sitchensis]
          Length = 462

 Score =  110 bits (276), Expect = 5e-22
 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
 Frame = +2

Query: 209 SKSKFTMREREMGGSSSSCK--ALWPENAIGALLGMFEEFQASCSISVGSTHQMGKTHWG 382
           ++   +++ +EM  S S  +  ALWP  AI  LL  FE+     ++S G   ++GKTHWG
Sbjct: 60  NRPPLSLKRKEMTESPSRAQKEALWPNTAIDVLLLKFEDM--CFNVSRG---RLGKTHWG 114

Query: 383 RIAHALNTACNTSYTGVQCKYKWNRLKKSYTKAKQRGDNSRFPFFSHVDRIVRHALSRK 559
           +IA A+N  C+ +Y+GVQCKYKWNRLKKSY KAK  G+ SRF F+  V+RIV  A  +K
Sbjct: 115 QIADAVNAVCSANYSGVQCKYKWNRLKKSYNKAKLHGETSRFLFYKRVERIVHRASGQK 173


>gb|ABR17366.1| unknown [Picea sitchensis]
          Length = 416

 Score =  108 bits (271), Expect = 2e-21
 Identities = 55/104 (52%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = +2

Query: 251 SSSSCKALWPENAIGALLGMFEEFQASC-SISVGSTHQMGKTHWGRIAHALNTACNTSYT 427
           S +  +ALWP  +I  LL  FE+   +C S+S G   ++GKTHWGRIA A+N  C+ +Y+
Sbjct: 29  SRAQKEALWPNTSIDVLLLKFED---TCFSVSRG---RLGKTHWGRIADAVNAVCSANYS 82

Query: 428 GVQCKYKWNRLKKSYTKAKQRGDNSRFPFFSHVDRIVRHALSRK 559
           GVQCKYKWNRLKKSY KAK  G+ SRF ++  V+RIV+ A   K
Sbjct: 83  GVQCKYKWNRLKKSYNKAKLHGETSRFVYYKRVERIVQKASGEK 126


>ref|XP_006846631.1| hypothetical protein AMTR_s00156p00055010 [Amborella trichopoda]
           gi|548849483|gb|ERN08306.1| hypothetical protein
           AMTR_s00156p00055010 [Amborella trichopoda]
          Length = 414

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 46/89 (51%), Positives = 58/89 (65%)
 Frame = +2

Query: 272 LWPENAIGALLGMFEEFQASCSISVGSTHQMGKTHWGRIAHALNTACNTSYTGVQCKYKW 451
           LWP  AI ALL  FEE+  +   +     Q+GK HW RIA  +N  C T YTG+QCKYKW
Sbjct: 45  LWPNTAIDALLDRFEEYCFNRPQA-----QLGKKHWDRIAMEVNRMCRTEYTGMQCKYKW 99

Query: 452 NRLKKSYTKAKQRGDNSRFPFFSHVDRIV 538
           +RLKK+Y K KQR   S++ FF HV+ +V
Sbjct: 100 HRLKKTYAKEKQRAGRSKWAFFPHVELLV 128


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