BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003277
         (560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   107   2e-21
emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]   107   2e-21
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe...   107   3e-21
ref|XP_006396166.1| hypothetical protein EUTSA_v10002476mg [Eutr...   106   3e-21
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   104   1e-20
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...   102   5e-20
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...   102   5e-20
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr...   102   5e-20
ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [...   102   6e-20
ref|XP_006346254.1| PREDICTED: zinc finger CCCH domain-containin...   101   1e-19
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind...   101   1e-19
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind...   101   1e-19
ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Caps...   101   1e-19
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo...   100   2e-19
ref|XP_006403742.1| hypothetical protein EUTSA_v10011072mg [Eutr...   100   2e-19
ref|XP_006293001.1| hypothetical protein CARUB_v10019278mg [Caps...   100   2e-19
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   100   2e-19
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi...   100   2e-19
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin...   100   3e-19

>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
           product [Vitis vinifera]
          Length = 544

 Score =  107 bits (268), Expect = 2e-21
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P+ N L NDD   +    S+E+LE+E++ELL  R+G+P+SIA+LP +YYE++ R LQ EG
Sbjct: 193 PIANDLANDD--HIFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEG 250

Query: 297 YLTESQRHGKVGCSLTKLLARSKTVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR +T+  IDR H Q
Sbjct: 251 YLTESQRHGKAGYSLTKLLARLRTIRLIDRPHGQ 284


>emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
          Length = 556

 Score =  107 bits (268), Expect = 2e-21
 Identities = 55/94 (58%), Positives = 71/94 (75%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P+ N L NDD   +    S+E+LE+E++ELL  R+G+P+SIA+LP +YYE++ R LQ EG
Sbjct: 193 PIANDLANDD--HIFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEG 250

Query: 297 YLTESQRHGKVGCSLTKLLARSKTVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR +T+  IDR H Q
Sbjct: 251 YLTESQRHGKAGYSLTKLLARLRTIRLIDRPHGQ 284


>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score =  107 bits (266), Expect = 3e-21
 Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
 Frame = +3

Query: 111 SIPLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQD 290
           S P +N L NDD   V+   SLE+LE+EI ELL  R+G PISIA+LP +YYEK+ RTLQ 
Sbjct: 211 SHPNLNELSNDD--HVVSPGSLEKLEIEIIELLKSRRGFPISIASLPMMYYEKYGRTLQA 268

Query: 291 EGYLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           EGYLTESQRHGK G SLTKLLAR K ++  +DR H Q
Sbjct: 269 EGYLTESQRHGKAGYSLTKLLARLKNSIRLLDRPHGQ 305


>ref|XP_006396166.1| hypothetical protein EUTSA_v10002476mg [Eutrema salsugineum]
           gi|557096437|gb|ESQ36945.1| hypothetical protein
           EUTSA_v10002476mg [Eutrema salsugineum]
          Length = 538

 Score =  106 bits (265), Expect = 3e-21
 Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N L +++   V+   SLE+LE EI ELL  R+G+PISIA+LP +YYEK+ RTLQ EG
Sbjct: 197 PNTNNLSDEE--HVVSPGSLEKLEGEIIELLKSRRGAPISIASLPMMYYEKYGRTLQAEG 254

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K T+C +DR H Q
Sbjct: 255 YLTESQRHGKAGYSLTKLLARLKNTICLVDRPHGQ 289


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  104 bits (260), Expect = 1e-20
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N L NDD   V    SLE+LE+E++ELL  R+G P+SIA+LP +YYEK+ RTLQ EG
Sbjct: 179 PGANELPNDD--HVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEG 236

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 237 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 271


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  104 bits (260), Expect = 1e-20
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N L NDD   V    SLE+LE+E++ELL  R+G P+SIA+LP +YYEK+ RTLQ EG
Sbjct: 226 PGANELPNDD--HVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEG 283

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 284 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 318


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X4 [Citrus sinensis]
          Length = 578

 Score =  102 bits (255), Expect = 5e-20
 Identities = 59/95 (62%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N + N+D   V    SLERLE EI+ELL  R+G PISIA+LP +YYEK+ +TLQ EG
Sbjct: 227 PNANDIRNED--HVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 319


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X3 [Citrus sinensis]
          Length = 579

 Score =  102 bits (255), Expect = 5e-20
 Identities = 59/95 (62%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N + N+D   V    SLERLE EI+ELL  R+G PISIA+LP +YYEK+ +TLQ EG
Sbjct: 227 PNANDIRNED--HVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 319


>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
           gi|557550378|gb|ESR61007.1| hypothetical protein
           CICLE_v10014902mg [Citrus clementina]
          Length = 524

 Score =  102 bits (255), Expect = 5e-20
 Identities = 59/95 (62%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N + N+D   V    SLERLE EI+ELL  R+G PISIA+LP +YYEK+ +TLQ EG
Sbjct: 172 PNANDIRNED--HVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 229

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 230 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 264


>ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
           thaliana] gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 18;
           Short=AtC3H18 gi|4755187|gb|AAD29054.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330250805|gb|AEC05899.1| zinc finger CCCH
           domain-containing protein 18 [Arabidopsis thaliana]
          Length = 536

 Score =  102 bits (254), Expect = 6e-20
 Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = +3

Query: 171 SLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLTESQRHGKVGCSLTKL 350
           SLE+LE EI ELL +R+G+PISIA+LP +YYEK+ RTLQ EGYLTESQRHGK G SLTKL
Sbjct: 211 SLEKLEGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKL 270

Query: 351 LARSK-TVCFIDRYHPQ 398
           LAR K T+  +DR H Q
Sbjct: 271 LARLKNTIRLVDRPHGQ 287


>ref|XP_006346254.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Solanum tuberosum]
          Length = 531

 Score =  101 bits (252), Expect = 1e-19
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = +3

Query: 108 ESIPLI---NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRR 278
           ES PL    N  +N D   VL   SLE+LE+EI+ELL  + G+P+SIA+LP +YY K+ R
Sbjct: 191 ESYPLTINPNLCENGDEDEVLSPGSLEKLELEITELLKEKNGNPVSIASLPMMYYGKYGR 250

Query: 279 TLQDEGYLTESQRHGKVGCSLTKLLARSKTVCFIDRYHPQ 398
           TLQ EGYLTESQR+GK G +LTKLLAR K V  I+R H Q
Sbjct: 251 TLQAEGYLTESQRNGKAGYNLTKLLARLKFVHLIERPHGQ 290


>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 4, partial [Theobroma cacao]
          Length = 430

 Score =  101 bits (251), Expect = 1e-19
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +3

Query: 126 NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLT 305
           N + NDD   V+   +LE+LE+E++ELL  R+G P+SIA+LP LYYE + RTLQ EGYLT
Sbjct: 231 NDVGNDD--HVISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLT 288

Query: 306 ESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           ESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 289 ESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 320


>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
           gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
           protein with RNA-binding domain, putative isoform 1
           [Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
           zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
          Length = 545

 Score =  101 bits (251), Expect = 1e-19
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +3

Query: 126 NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLT 305
           N + NDD   V+   +LE+LE+E++ELL  R+G P+SIA+LP LYYE + RTLQ EGYLT
Sbjct: 231 NDVGNDD--HVISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLT 288

Query: 306 ESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           ESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 289 ESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 320


>ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Capsella rubella]
           gi|482566090|gb|EOA30279.1| hypothetical protein
           CARUB_v10013406mg [Capsella rubella]
          Length = 539

 Score =  101 bits (251), Expect = 1e-19
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +3

Query: 171 SLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLTESQRHGKVGCSLTKL 350
           SLE+LE EI ELL  R+G+PISIA+LP +YYEK+ RTLQ EGYLTESQRHGK G SLTKL
Sbjct: 213 SLEKLEGEIIELLKSRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKL 272

Query: 351 LARSK-TVCFIDRYHPQ 398
           LAR K T+  IDR H Q
Sbjct: 273 LARLKNTIRLIDRPHGQ 289


>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 557

 Score =  100 bits (249), Expect = 2e-19
 Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
 Frame = +3

Query: 108 ESIPLI--NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRT 281
           ES P I  N + ND+    +   +LERLE+EI ELL  R GSP+SIA+LP +YYEK+ R+
Sbjct: 202 ESFPRIVSNEVPNDE--QAISPGTLERLEMEIVELLRSRIGSPVSIASLPMMYYEKYGRS 259

Query: 282 LQDEGYLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           LQ EGYLTESQRHGK G SLTKLLAR K ++  +DR H Q
Sbjct: 260 LQAEGYLTESQRHGKTGYSLTKLLARLKHSIRIVDRPHGQ 299


>ref|XP_006403742.1| hypothetical protein EUTSA_v10011072mg [Eutrema salsugineum]
           gi|557104861|gb|ESQ45195.1| hypothetical protein
           EUTSA_v10011072mg [Eutrema salsugineum]
          Length = 542

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +3

Query: 120 LINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGY 299
           + N L +++   V+   SLE+LE EI ELL  R+G+PISIA+LP +YYEK+ RTLQ EGY
Sbjct: 199 MFNNLSDEE--HVVSPGSLEKLEGEIIELLKSRRGAPISIASLPMMYYEKYGRTLQAEGY 256

Query: 300 LTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           LTESQRHGK G SLTKLL R K T+  IDR H Q
Sbjct: 257 LTESQRHGKAGYSLTKLLVRLKNTIRLIDRPHGQ 290


>ref|XP_006293001.1| hypothetical protein CARUB_v10019278mg [Capsella rubella]
           gi|482561708|gb|EOA25899.1| hypothetical protein
           CARUB_v10019278mg [Capsella rubella]
          Length = 542

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/92 (61%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
 Frame = +3

Query: 126 NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLT 305
           N L +D+   V+ + SLE+LE EI ELL  R+G+PISIA+LP +YYEK+ +TLQ EGYLT
Sbjct: 202 NNLSDDE--HVVSSCSLEKLEGEIIELLKSRRGAPISIASLPMMYYEKYGKTLQAEGYLT 259

Query: 306 ESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           ESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 260 ESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 291


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  100 bits (249), Expect = 2e-19
 Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +3

Query: 126 NGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEGYLT 305
           N   ND+   V+   SLE+LE+E++ELL  R+G P+SIA+LP +YYEK+ +TLQ EGYLT
Sbjct: 233 NDFSNDE--HVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLT 290

Query: 306 ESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           ESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 291 ESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQ 322


>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
           gi|162677364|gb|EDQ63835.1| predicted protein
           [Physcomitrella patens]
          Length = 386

 Score =  100 bits (249), Expect = 2e-19
 Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
 Frame = +3

Query: 111 SIPLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQD 290
           S   ++G+D+   P      SLERLE+E+ ELL  R+ +P+SIA+LPQLYYE+F +TLQ 
Sbjct: 182 SCRFLHGMDDGMAPG-----SLERLEIELQELLRGRR-APVSIASLPQLYYERFGKTLQA 235

Query: 291 EGYLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           EGYLTESQRHGK G SLTKLLAR K TV  IDR H Q
Sbjct: 236 EGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQ 272


>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Fragaria vesca subsp. vesca]
          Length = 566

 Score =  100 bits (248), Expect = 3e-19
 Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = +3

Query: 117 PLINGLDNDDLPPVLVARSLERLEVEISELL*IRKGSPISIAALPQLYYEKFRRTLQDEG 296
           P  N    DD   V+   SLE+LE EI ELL  R+G PISIA+LP +YYEK+ RTLQ EG
Sbjct: 215 PNSNEAQGDD--HVVSPGSLEKLEYEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEG 272

Query: 297 YLTESQRHGKVGCSLTKLLARSK-TVCFIDRYHPQ 398
           YLTESQRHGK G SLTKLLAR K ++  IDR H Q
Sbjct: 273 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQ 307