BLASTX nr result

ID: Ephedra28_contig00003197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003197
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24684.1| unknown [Picea sitchensis]                              64   2e-08

>gb|ABK24684.1| unknown [Picea sitchensis]
          Length = 375

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 52/156 (33%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
 Frame = +2

Query: 11  PTYG---RSPYMMSGDPGPRDRYSGSWSLGPPNNAY-------------------DYGRG 124
           P +G   R PY+  G  G RD YSG    G  +N Y                   +YGRG
Sbjct: 220 PVHGIDNRPPYIPGGVGGFRDSYSGFEGAGYGSNPYRSAGGYGGRPGGYAGYGGPEYGRG 279

Query: 125 YASE-------YDRYPD-GYWGRESPYVEGAGAYG--MSSRYTRPSDVXXXXXXXXXXXX 274
           Y          Y+  P  GY GR + Y EG G YG  M   Y    D             
Sbjct: 280 YGGYGGGSLGGYEEEPSRGYGGRLASYGEGFGGYGSGMIGGYGGGGDGYGAYGDSGYGGS 339

Query: 275 XDA-RVGNSYSAGSTYSSARGGHGGA---RYHPYTR 370
            D+ R+G  Y +G  Y S RG +GG+   RYHPY R
Sbjct: 340 FDSSRIGGVYGSGGAYGSGRGAYGGSTNGRYHPYAR 375


Top