BLASTX nr result
ID: Ephedra28_contig00003133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00003133
(739 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 306 6e-81
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 301 1e-79
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 301 1e-79
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 301 1e-79
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 301 1e-79
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 300 4e-79
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr... 296 4e-78
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr... 296 4e-78
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 296 5e-78
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 296 5e-78
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 296 6e-78
ref|XP_002320513.1| RNA recognition motif-containing family prot... 295 1e-77
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe... 292 9e-77
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 291 2e-76
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind... 289 6e-76
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi... 289 6e-76
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 288 1e-75
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo... 287 2e-75
ref|XP_002302838.2| RNA recognition motif-containing family prot... 286 4e-75
ref|XP_001758251.1| predicted protein [Physcomitrella patens] gi... 285 1e-74
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 306 bits (783), Expect = 6e-81
Identities = 157/211 (74%), Positives = 183/211 (86%), Gaps = 2/211 (0%)
Frame = +1
Query: 52 VLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGY 231
++ +G+LERLE+E+ +LL+ K+ +PISIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGY
Sbjct: 239 MISSGTLERLEMELLQLLRAKR-TPISIASLPQLYYERFGKTLQAEGYLTESQRHGKAGY 297
Query: 232 SLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGG-GATAPTSNAGSRQIYL 405
SLTKLLARLK ++RLIDRPHGQHA+VLAEDA++YTEY+ + GA AGSRQIYL
Sbjct: 298 SLTKLLARLKNSIRLIDRPHGQHAVVLAEDAAKYTEYRSDRNDPGAIV----AGSRQIYL 353
Query: 406 TFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVC 585
TFPAESTFTEEDVSNYFRT+GPVQDVRIP QQKRMFGFVTF+YPETVK IL KGNPH VC
Sbjct: 354 TFPAESTFTEEDVSNYFRTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVC 413
Query: 586 GSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 678
G+RVLVKPY+EK +L DRK EK + P Y S
Sbjct: 414 GARVLVKPYREKSRLVDRKYPEKIDHPVYYS 444
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 301 bits (772), Expect = 1e-79
Identities = 157/228 (68%), Positives = 181/228 (79%), Gaps = 3/228 (1%)
Frame = +1
Query: 13 PLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEG 192
P + + N+D V GSLERLE EI ELL+ ++G PISIA+LP +YYEK+G+TLQAEG
Sbjct: 227 PNANDIRNEDH--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284
Query: 193 YLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGA 363
YLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED Y EY GE GG
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGI 344
Query: 364 TAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPET 543
A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ET
Sbjct: 345 VA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAET 399
Query: 544 VKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 687
VK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL +
Sbjct: 400 VKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHF 447
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 301 bits (772), Expect = 1e-79
Identities = 157/228 (68%), Positives = 181/228 (79%), Gaps = 3/228 (1%)
Frame = +1
Query: 13 PLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEG 192
P + + N+D V GSLERLE EI ELL+ ++G PISIA+LP +YYEK+G+TLQAEG
Sbjct: 227 PNANDIRNEDH--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284
Query: 193 YLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGA 363
YLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED Y EY GE GG
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGI 344
Query: 364 TAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPET 543
A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ET
Sbjct: 345 VA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAET 399
Query: 544 VKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 687
VK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL +
Sbjct: 400 VKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHF 447
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 301 bits (772), Expect = 1e-79
Identities = 157/228 (68%), Positives = 181/228 (79%), Gaps = 3/228 (1%)
Frame = +1
Query: 13 PLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEG 192
P + + N+D V GSLERLE EI ELL+ ++G PISIA+LP +YYEK+G+TLQAEG
Sbjct: 172 PNANDIRNEDH--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 229
Query: 193 YLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGA 363
YLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED Y EY GE GG
Sbjct: 230 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGI 289
Query: 364 TAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPET 543
A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ET
Sbjct: 290 VA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAET 344
Query: 544 VKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 687
VK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL +
Sbjct: 345 VKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHF 392
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 301 bits (772), Expect = 1e-79
Identities = 156/218 (71%), Positives = 179/218 (82%), Gaps = 3/218 (1%)
Frame = +1
Query: 34 NDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQR 213
NDD V+ G+LE+LE+E+ ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQR
Sbjct: 235 NDDH--VISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQR 292
Query: 214 HGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNA 384
HGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAEDA +Y EY GE GG A
Sbjct: 293 HGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA----- 347
Query: 385 GSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAK 564
GSRQIYLTFPAESTFTEEDVSNYF +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAK
Sbjct: 348 GSRQIYLTFPAESTFTEEDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAK 407
Query: 565 GNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 678
GNPH VCG+RVLVKPY+EK ++ DRK EK + P Y S
Sbjct: 408 GNPHFVCGARVLVKPYREKSRVVDRKFTEKVQQPMYYS 445
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 300 bits (767), Expect = 4e-79
Identities = 155/220 (70%), Positives = 181/220 (82%), Gaps = 2/220 (0%)
Frame = +1
Query: 7 SIPLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQA 186
S P ++ L NDD V+ GSLE+LE+EI ELL+ ++G PISIA+LP +YYEK+GRTLQA
Sbjct: 211 SHPNLNELSNDDH--VVSPGSLEKLEIEIIELLKSRRGFPISIASLPMMYYEKYGRTLQA 268
Query: 187 EGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGA 363
EGYLTESQRHGKAGYSLTKLLARLK ++RL+DRPHGQH+++LAED +Y EY GE
Sbjct: 269 EGYLTESQRHGKAGYSLTKLLARLKNSIRLLDRPHGQHSVILAEDIPKYLEYAGE----K 324
Query: 364 TAPTSN-AGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPE 540
T P AGSRQIYLTFPAES FTE+DVSNYF YGPVQDVRIP QQKRMFGFVTFVY E
Sbjct: 325 TEPGGIIAGSRQIYLTFPAESNFTEQDVSNYFNKYGPVQDVRIPCQQKRMFGFVTFVYAE 384
Query: 541 TVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQE 660
TV+ IL+KGNPH VCG+RVLVKPY+EK +L DRK +EK +
Sbjct: 385 TVRHILSKGNPHFVCGARVLVKPYREKSRLVDRKFSEKMQ 424
>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921060|ref|XP_006452536.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921062|ref|XP_006452537.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555760|gb|ESR65774.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555762|gb|ESR65776.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555763|gb|ESR65777.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 547
Score = 296 bits (759), Expect = 4e-78
Identities = 157/236 (66%), Positives = 182/236 (77%), Gaps = 4/236 (1%)
Frame = +1
Query: 22 DGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLT 201
DG ++D + GSLE+LE+EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLT
Sbjct: 221 DGFNDDH---LFSPGSLEKLELEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLT 277
Query: 202 ESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTS 378
ESQRHGKAGYSLTKLLARLK +VRLIDRPHGQHA++LAEDA +Y E + E T
Sbjct: 278 ESQRHGKAGYSLTKLLARLKNSVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT- 336
Query: 379 NAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTIL 558
GSRQIYLTFPAESTFTE+DVSNYF TYGPV DVRIP QQKRMFGFVTF +TVK IL
Sbjct: 337 --GSRQIYLTFPAESTFTEDDVSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMIL 394
Query: 559 AKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY---NLDVYDFQLG 717
AKGNPH VCG+RVLVKPY+EK KL DRK E+ E P Y S Y + D++ F G
Sbjct: 395 AKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQYVDMDSDLHSFSRG 450
>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921054|ref|XP_006452533.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921058|ref|XP_006452535.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X1
[Citrus sinensis] gi|568841992|ref|XP_006474937.1|
PREDICTED: zinc finger CCCH domain-containing protein
18-like isoform X2 [Citrus sinensis]
gi|557555758|gb|ESR65772.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555759|gb|ESR65773.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555761|gb|ESR65775.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 565
Score = 296 bits (759), Expect = 4e-78
Identities = 157/236 (66%), Positives = 182/236 (77%), Gaps = 4/236 (1%)
Frame = +1
Query: 22 DGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLT 201
DG ++D + GSLE+LE+EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLT
Sbjct: 221 DGFNDDH---LFSPGSLEKLELEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLT 277
Query: 202 ESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTS 378
ESQRHGKAGYSLTKLLARLK +VRLIDRPHGQHA++LAEDA +Y E + E T
Sbjct: 278 ESQRHGKAGYSLTKLLARLKNSVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT- 336
Query: 379 NAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTIL 558
GSRQIYLTFPAESTFTE+DVSNYF TYGPV DVRIP QQKRMFGFVTF +TVK IL
Sbjct: 337 --GSRQIYLTFPAESTFTEDDVSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMIL 394
Query: 559 AKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY---NLDVYDFQLG 717
AKGNPH VCG+RVLVKPY+EK KL DRK E+ E P Y S Y + D++ F G
Sbjct: 395 AKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQYVDMDSDLHSFSRG 450
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 296 bits (758), Expect = 5e-78
Identities = 157/231 (67%), Positives = 181/231 (78%), Gaps = 6/231 (2%)
Frame = +1
Query: 13 PLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEG 192
P + + N+D V GSLERLE EI ELL+ ++G PISIA+LP +YYEK+G+TLQAEG
Sbjct: 227 PNANDIRNEDH--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284
Query: 193 YLTESQRHGKAGYSLTKLLARLK-TVRLIDR---PHGQHAIVLAEDASRYTEYKGEGG-- 354
YLTESQRHGKAGYSLTKLLARLK ++RLIDR PHGQH+++LAED Y EY GE
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDP 344
Query: 355 GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVY 534
GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+
Sbjct: 345 GGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVF 399
Query: 535 PETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 687
ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL +
Sbjct: 400 AETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHF 450
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 296 bits (758), Expect = 5e-78
Identities = 157/231 (67%), Positives = 181/231 (78%), Gaps = 6/231 (2%)
Frame = +1
Query: 13 PLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEG 192
P + + N+D V GSLERLE EI ELL+ ++G PISIA+LP +YYEK+G+TLQAEG
Sbjct: 227 PNANDIRNEDH--VFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEG 284
Query: 193 YLTESQRHGKAGYSLTKLLARLK-TVRLIDR---PHGQHAIVLAEDASRYTEYKGEGG-- 354
YLTESQRHGKAGYSLTKLLARLK ++RLIDR PHGQH+++LAED Y EY GE
Sbjct: 285 YLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDP 344
Query: 355 GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVY 534
GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+
Sbjct: 345 GGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVF 399
Query: 535 PETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 687
ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL +
Sbjct: 400 AETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHF 450
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 296 bits (757), Expect = 6e-78
Identities = 148/218 (67%), Positives = 176/218 (80%), Gaps = 1/218 (0%)
Frame = +1
Query: 4 ESIPLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQ 183
ES P I + + + G+LERLE+EI ELL+ + GSP+SIA+LP +YYEK+GR+LQ
Sbjct: 202 ESFPRIVSNEVPNDEQAISPGTLERLEMEIVELLRSRIGSPVSIASLPMMYYEKYGRSLQ 261
Query: 184 AEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGG 360
AEGYLTESQRHGK GYSLTKLLARLK ++R++DRPHGQH+++LAED RY +Y GE
Sbjct: 262 AEGYLTESQRHGKTGYSLTKLLARLKHSIRIVDRPHGQHSVILAEDVPRYLDYAGEKNEP 321
Query: 361 ATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPE 540
+ GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFVYPE
Sbjct: 322 GVIVS---GSRQIYLTFPAESTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYPE 378
Query: 541 TVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEK 654
TV+ IL+KGNPH VCG+RVLVKPY+EK +L DRK AEK
Sbjct: 379 TVRQILSKGNPHFVCGARVLVKPYREKSRLVDRKFAEK 416
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 295 bits (754), Expect = 1e-77
Identities = 148/208 (71%), Positives = 173/208 (83%), Gaps = 3/208 (1%)
Frame = +1
Query: 64 GSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTK 243
GSLE+LE+E+ ELL+ ++G P+SIA+LP +YYEK+GR LQAEGYLTESQRHGKAGYSLTK
Sbjct: 219 GSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTK 278
Query: 244 LLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFP 414
LLARLK ++RLIDRPHGQH+++L ED +Y EY GE GG A GSRQIYLTFP
Sbjct: 279 LLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVA-----GSRQIYLTFP 333
Query: 415 AESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSR 594
AESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPH VCG+R
Sbjct: 334 AESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGAR 393
Query: 595 VLVKPYKEKGKLADRKPAEKQEFPGYSS 678
VLVKPY+EK +L DRK AEK + P + S
Sbjct: 394 VLVKPYREKSRLVDRKYAEKIQHPFFYS 421
>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 292 bits (747), Expect = 9e-77
Identities = 152/242 (62%), Positives = 185/242 (76%), Gaps = 4/242 (1%)
Frame = +1
Query: 4 ESIPLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQ 183
ES + G D + V+ GSLE+LE EI ELL+ ++G PISIA+LP +YY+KFG++LQ
Sbjct: 211 ESFSQMYGNDCINDDHVISPGSLEKLEWEITELLRSRRGIPISIASLPMMYYDKFGKSLQ 270
Query: 184 AEGYLTESQRHGKAGYSLTKLLARL-KTVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGG 360
AEGYLTESQRHGKAGYSLTKLLARL ++RLIDRPHGQHA++LAED+ +Y +++ E G
Sbjct: 271 AEGYLTESQRHGKAGYSLTKLLARLGSSIRLIDRPHGQHAVILAEDSPKYADHRNEKGDP 330
Query: 361 ATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPE 540
+ GSRQIYLTFPAESTF+E+DVSNYF T+GPV+DVRIP QQKRMFGFVTFV+ +
Sbjct: 331 GPIVS---GSRQIYLTFPAESTFSEDDVSNYFSTFGPVEDVRIPCQQKRMFGFVTFVHAD 387
Query: 541 TVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY---NLDVYDFQ 711
TVK ILAKGNPH VCGSRVLVKPY+EK KL DRK E+ + Y S + D Y
Sbjct: 388 TVKMILAKGNPHYVCGSRVLVKPYREKSKLVDRKHQERMDPAAYLSQHHADMESDFYSMS 447
Query: 712 LG 717
+G
Sbjct: 448 VG 449
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 291 bits (744), Expect = 2e-76
Identities = 147/212 (69%), Positives = 175/212 (82%), Gaps = 3/212 (1%)
Frame = +1
Query: 52 VLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGY 231
V+ GSLE+LE+E+AELL+ ++G P+SIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGY
Sbjct: 241 VVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGY 300
Query: 232 SLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIY 402
SLTKLLARLK ++R+IDRPHGQH+++L ED +Y EY GE GG A GSRQIY
Sbjct: 301 SLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVA-----GSRQIY 355
Query: 403 LTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDV 582
LTFPAES FTE DVS YF +GPVQDVRIP QQKRMFGFVTF++ ETVK ILAKGNPH V
Sbjct: 356 LTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYV 415
Query: 583 CGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 678
CG+RVLVKPY+EK +L DRK +EK + P Y+S
Sbjct: 416 CGARVLVKPYREKSRLIDRKFSEKLQHPMYNS 447
>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
Length = 430
Score = 289 bits (740), Expect = 6e-76
Identities = 148/202 (73%), Positives = 170/202 (84%), Gaps = 3/202 (1%)
Frame = +1
Query: 34 NDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQR 213
NDD V+ G+LE+LE+E+ ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQR
Sbjct: 235 NDDH--VISPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQR 292
Query: 214 HGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNA 384
HGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAEDA +Y EY GE GG A
Sbjct: 293 HGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA----- 347
Query: 385 GSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAK 564
GSRQIYLTFPAESTFTEEDVSNYF +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAK
Sbjct: 348 GSRQIYLTFPAESTFTEEDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAK 407
Query: 565 GNPHDVCGSRVLVKPYKEKGKL 630
GNPH VCG+RVLVKPY+EK ++
Sbjct: 408 GNPHFVCGARVLVKPYREKSRV 429
>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
gi|162677364|gb|EDQ63835.1| predicted protein
[Physcomitrella patens]
Length = 386
Score = 289 bits (740), Expect = 6e-76
Identities = 150/212 (70%), Positives = 175/212 (82%), Gaps = 1/212 (0%)
Frame = +1
Query: 7 SIPLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQA 186
S + G+D+ P GSLERLE+E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQA
Sbjct: 182 SCRFLHGMDDGMAP-----GSLERLEIELQELLRGRR-APVSIASLPQLYYERFGKTLQA 235
Query: 187 EGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGA 363
EGYLTESQRHGKAGYSLTKLLARLK TV LIDRPHGQHA+VLAEDA R+T Y+ + G
Sbjct: 236 EGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDAHRFTAYRSDHRGED 295
Query: 364 TAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPET 543
+ N SRQIYLTFPAESTFTEEDV+ +FR YGPVQDVRIPYQQKRMFGFVTFVY ET
Sbjct: 296 LSGI-NPSSRQIYLTFPAESTFTEEDVTAHFRAYGPVQDVRIPYQQKRMFGFVTFVYSET 354
Query: 544 VKTILAKGNPHDVCGSRVLVKPYKEKGKLADR 639
VK IL++GNPH +CG+RVLVKPY+EKGK DR
Sbjct: 355 VKAILSEGNPHYICGARVLVKPYREKGKHGDR 386
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 288 bits (737), Expect = 1e-75
Identities = 149/212 (70%), Positives = 175/212 (82%), Gaps = 3/212 (1%)
Frame = +1
Query: 52 VLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGY 231
V+ GSLE+LE EI ELL+ ++G PISIA+LP +YYEK+GRTLQAEGYLTESQRHGKAGY
Sbjct: 226 VVSPGSLEKLEYEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGY 285
Query: 232 SLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSN-AGSRQIYL 405
SLTKLLARLK ++RLIDRPHGQH+++LAED +Y EY GE T P AGSRQIYL
Sbjct: 286 SLTKLLARLKNSIRLIDRPHGQHSVILAEDIPKYLEYTGE----KTEPGGIIAGSRQIYL 341
Query: 406 TFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVC 585
TFPAES FTE+DVSNYF YGPVQDVRIP QQKRMFGFVTF+Y +TV+ IL+KGNPH VC
Sbjct: 342 TFPAESNFTEQDVSNYFNKYGPVQDVRIPCQQKRMFGFVTFLYADTVRHILSKGNPHFVC 401
Query: 586 GSRVLVKPYKEKGKLADRKPAEK-QEFPGYSS 678
G+RVLVKPY+EK + DRK ++K Q P ++S
Sbjct: 402 GARVLVKPYREKSRPVDRKFSDKMQHSPCFNS 433
>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 556
Score = 287 bits (735), Expect = 2e-75
Identities = 147/230 (63%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
Frame = +1
Query: 4 ESIPLIDGLDNDDPPPVLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQ 183
E+ + G D+ + GSLE+LEVEI ELL+ ++G+P+SIA+LP +YYEK+G+ LQ
Sbjct: 203 ENFSQVHGNDSFGDDHLFSPGSLEQLEVEIIELLKSRRGNPVSIASLPAMYYEKYGKYLQ 262
Query: 184 AEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGG 360
AEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQHA++LAED+ ++ + + E
Sbjct: 263 AEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVILAEDSQKFFDNRSEKSDP 322
Query: 361 ATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPE 540
+ GSRQIYLTFPAESTFTEEDVSNYF T+G V+DVRIP QQKRMFGFVTF +
Sbjct: 323 GPIVS---GSRQIYLTFPAESTFTEEDVSNYFNTFGTVEDVRIPCQQKRMFGFVTFAIAD 379
Query: 541 TVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGYN 690
TVK ILAKGNPH VCG+RVLVKPY+EK KL DRK +++ E P Y S Y+
Sbjct: 380 TVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYSDRFEAPVYYSPHYS 429
>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 391
Score = 286 bits (733), Expect = 4e-75
Identities = 143/199 (71%), Positives = 167/199 (83%), Gaps = 3/199 (1%)
Frame = +1
Query: 52 VLVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGY 231
V+ GS E+LE+E+ ELL+ ++G P+SIA+LP +YYE +GRTLQAEGYLTESQRHGKAGY
Sbjct: 198 VVSPGSFEKLELELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGY 257
Query: 232 SLTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIY 402
SLTKLLARLK ++RLIDRPHGQH+++LAED +Y EY GE GG A GSRQIY
Sbjct: 258 SLTKLLARLKNSIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVA-----GSRQIY 312
Query: 403 LTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDV 582
LTFPAESTFTE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH +
Sbjct: 313 LTFPAESTFTEQDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHI 372
Query: 583 CGSRVLVKPYKEKGKLADR 639
CG+RVLVKPY+EK +L DR
Sbjct: 373 CGARVLVKPYREKSRLIDR 391
>ref|XP_001758251.1| predicted protein [Physcomitrella patens]
gi|162690707|gb|EDQ77073.1| predicted protein
[Physcomitrella patens]
Length = 421
Score = 285 bits (729), Expect = 1e-74
Identities = 144/196 (73%), Positives = 169/196 (86%), Gaps = 1/196 (0%)
Frame = +1
Query: 55 LVAGSLERLEVEIAELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYS 234
+ GSLERLE+E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYS
Sbjct: 228 MAPGSLERLEIELQELLRGRR-APVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYS 286
Query: 235 LTKLLARLK-TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTF 411
LTKLLARLK TV LIDRPHGQHA+VLAEDA R+T ++ + G + N SRQIYLTF
Sbjct: 287 LTKLLARLKNTVTLIDRPHGQHAVVLAEDAHRFTVHRSDHRGEDLSGI-NPSSRQIYLTF 345
Query: 412 PAESTFTEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGS 591
PAESTF EEDV+++FR YGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPH +CG+
Sbjct: 346 PAESTFCEEDVTSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGA 405
Query: 592 RVLVKPYKEKGKLADR 639
RVLVKPY+EKGK DR
Sbjct: 406 RVLVKPYREKGKHGDR 421